These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8643#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2159 fasta sequence [TCCATCCATAAATCTCGTTTCGTCCTCGCCCGCCGCCTCCGCTTCCCATTCCCGCCGCCCGCTTCCTCCACCTGATCCTTCGCCCTCGATTCGCTGCACTTGATCCGCCGCTGCGCCGCCTCTCGATTCGATCCATCTCTGTGCCCTAGCTACCCTCGCAGCAGAGTCCACTCCACCCGAGGTGCGACATGGCCGTCGGGATGGCGCCTCCTCCTCCCACGGCCGCCGCGCTGCCGTCCCGCCGCCGCCTCAGGGAGCGGATCCAGTCGGAGCGCCAGGTGGTCGGCGGCCTCCTCAAGAAGGCGGAGGCCTTGGTGGCCCGCGCCAAGGAGGACGTCCATGGCGGGCGCGCCGCGGCGGCGCACTCCGAGGCCTGCGCTCTCCCTCGCCGCGGCCGTTTCTTGCGTCGTCCGGAGGCCCGACCGGAGGCGGAGGCCACCGCCGCGATGGACGGGGCTGCCTCTCCCCGCAAGAAGAGGCGGAAGGCGGCGACCTCCGCGAGCTCGATCGTGGAGGTGGAGGTGATCGAGCCGACCATGCCCAAGGCGCAGAGGGACCGCCTCTACGGCCTCCTCTCCTCGCTGTCGGCGGAGATGCCATTGCCGCCGCACATCGTGGCCTTGATGCAGAGCCAGTGCTGCTGCGTCGTGGACCCTAATGGCGAAGAGATGGATGTGGACCTTGGCTCCGCGAAGGATGCTGCCTTGTTCCAGTTGCTGAACCTGCTCGAGGAATTCGCTCAACAGCAGACCACCAAGATTCAGCCACGGCTGGCGGAGGAGCAAGAACCGCCCAAGATCGAGGCACCCGACGCCACCAGCCGCTCGTCGTCGATCTGCCAACTGATGGAGGACGGCGAGGTCGCCGATGAGGGCGCGGACATGGACATGGACATCTGCGGCGGCGTCTCTCCCCTGGTAGTGGACAAGGTTCAGTTCTCGCCGCTTCCGAAGCAAGAAGAGGATGATGAGTTGATCAACACCAGCGGCGGCGGCGGCTTCTCTCTCCAATCGCCGCCTGCCAAGCAACAAGAGGAAGAATTCGTCCGCGATGCCTCCCCTGTTGCAGTTGACAAGTTCCCTCAAACTGAATCTCCTAGCTCGAGCACTGGCTCCTCTTCTGGATCGTCATCATCTTCATCTTCGAGCGGTGGCTCATCTGGATCATCCTGCAGCGGTTGCTCCTCTTCAGGCAGCGACTCTAACGATGACGGAGACAGTGCGAGCAGCCGCCCTGATAACTCTGAACTTCCCACTGAAGCTGCAGCGAAGCCATTGGAGCAGCAGCAGGTCACAGTCTGCGGCGGCGTCTCTCCCCTGATCGATGAGTTCTCGCCGCTTCCGAAGCAACAAGAGGATGACGAGTTGATCGACGTCACTGGCGGCGTCTCCCCTGTATCAGTCAACAAGTTCCCAGATTCTCCTCGCTCGAGCAGCAGTGGCTCTTCCTCCTCTTCCAGCAGCGGTTCGTCCTCCTCCTCGTCGGAAAGTGACTCAGACGACGACGGCGACAGTGCGAGCAGCAAGCCAGACACCGCAGATCATCCCACTGAAGCTGAGGCGCCGAAGCTTCCGCCATTGGAGCAACATGAGGTCGCGGAGCAAGACAAGAAGCTGATCGCCGAGAGAGCAGCATCTCCGAACACCGAGATGCAGGAGCTGATCGCCAGGGCCCAGGAGAGGCAGAAACTCCGGCTTGAGCTCGAGAGGAAGACGGCGCGCGAGCTCGAGAGGAAGATGGCGCGCGAGCAGCTGCAGGAGATGGAGAGGACGGCACGGCCGGTCTACGACAGCATCGACCCCAGTGTCATGAAGCAGCTCGGGATCTCCGGCGATGCGCAGTACATCGTCAGCCCGGTGAAATCTCGGCACAGCCTGCATCGGCGCGGCGGCGGCGGCCTGCTACAGAAGCTCGGCTTCTTCCTCAAAGAATAGCATGATCCATCATCAATGGTGTCTGTAAAGCTCTGTAGGTTTCTTGTCACATTGGGATCATATGCTCTGAGCCTCTGACAATGATCTCATCAGTTGCTTGCTCTCAAGCCTTTGATGTACTTAAAACCATTGATTAGCTTGCAGCTAAGTTATGCTGTACATGTGTCTTGTATTATATCTGATTATATGAAATTATGAATCGTCTTAAACAACTGTACTGTTTCT] [+] EMBL AK103719 [TCCATCCATAAATCTCGTTTCGTCCTCGCCCGCCGCCTCCGCTTCCCATTCCCGCCGCCCGCTTCCTCCACCTGATCCTTCGCCCTCGATTCGCTGCACTTGATCCGCCGCTGCGCCGCCTCTCGATTCGATCCATCTCTGTGCCCTAGCTACCCTCGCAGCAGAGTCCACTCCACCCGAGGTGCGACATGGCCGTCGGGATGGCGCCTCCTCCTCCCACGGCCGCCGCGCTGCCGTCCCGCCGCCGCCTCAGGGAGCGGATCCAGTCGGAGCGCCAGGTGGTCGGCGGCCTCCTCAAGAAGGCGGAGGCCTTGGTGGCCCGCGCCAAGGAGGACGTCCATGGCGGGCGCGCCGCGGCGGCGCACTCCGAGGCCTGCGCTCTCCCTCGCCGCGGCCGTTTCTTGCGTCGTCCGGAGGCCCGACCGGAGGCGGAGGCCACCGCCGCGATGGACGGGGCTGCCTCTCCCCGCAAGAAGAGGCGGAAGGCGGCGACCTCCGCGAGCTCGATCGTGGAGGTGGAGGTGATCGAGCCGACCATGCCCAAGGCGCAGAGGGACCGCCTCTACGGCCTCCTCTCCTCGCTGTCGGCGGAGATGCCATTGCCGCCGCACATCGTGGCCTTGATGCAGAGCCAGTGCTGCTGCGTCGTGGACCCTAATGGCGAAGAGATGGATGTGGACCTTGGCTCCGCGAAGGATGCTGCCTTGTTCCAGTTGCTGAACCTGCTCGAGGAATTCGCTCAACAGCAGACCACCAAGATTCAGCCACGGCTGGCGGAGGAGCAAGAACCGCCCAAGATCGAGGCACCCGACGCCACCAGCCGCTCGTCGTCGATCTGCCAACTGATGGAGGACGGCGAGGTCGCCGATGAGGGCGCGGACATGGACATGGACATCTGCGGCGGCGTCTCTCCCCTGGTAGTGGACAAGGTTCAGTTCTCGCCGCTTCCGAAGCAAGAAGAGGATGATGAGTTGATCAACACCAGCGGCGGCGGCGGCTTCTCTCTCCAATCGCCGCCTGCCAAGCAACAAGAGGAAGAATTCGTCCGCGATGCCTCCCCTGTTGCAGTTGACAAGTTCCCTCAAACTGAATCTCCTAGCTCGAGCACTGGCTCCTCTTCTGGATCGTCATCATCTTCATCTTCGAGCGGTGGCTCATCTGGATCATCCTGCAGCGGTTGCTCCTCTTCAGGCAGCGACTCTAACGATGACGGAGACAGTGCGAGCAGCCGCCCTGATAACTCTGAACTTCCCACTGAAGCTGCAGCGAAGCCATTGGAGCAGCAGCAGGTCACAGTCTGCGGCGGCGTCTCTCCCCTGATCGATGAGTTCTCGCCGCTTCCGAAGCAACAAGAGGATGACGAGTTGATCGACGTCACTGGCGGCGTCTCCCCTGTATCAGTCAACAAGTTCCCAGATTCTCCTCGCTCGAGCAGCAGTGGCTCTTCCTCCTCTTCCAGCAGCGGTTCGTCCTCCTCCTCGTCGGAAAGTGACTCAGACGACGACGGCGACAGTGCGAGCAGCAAGCCAGACACCGCAGATCATCCCACTGAAGCTGAGGCGCCGAAGCTTCCGCCATTGGAGCAACATGAGGTCGCGGAGCAAGACAAGAAGCTGATCGCCGAGAGAGCAGCATCTCCGAACACCGAGATGCAGGAGCTGATCGCCAGGGCCCAGGAGAGGCAGAAACTCCGGCTTGAGCTCGAGAGGAAGACGGCGCGCGAGCTCGAGAGGAAGATGGCGCGCGAGCAGCTGCAGGAGATGGAGAGGACGGCACGGCCGGTCTACGACAGCATCGACCCCAGTGTCATGAAGCAGCTCGGGATCTCCGGCGATGCGCAGTACATCGTCAGCCCGGTGAAATCTCGGCACAGCCTGCATCGGCGCGGCGGCGGCGGCCTGCTACAGAAGCTCGGCTTCTTCCTCAAAGAATAGCATGATCCATCATCAATGGTGTCTGTAAAGCTCTGTAGGTTTCTTGTCACATTGGGATCATATGCTCTGAGCCTCTGACAATGATCTCATCAGTTGCTTGCTCTCAAGCCTTTGATGTACTTAAAACCATTGATTAGCTTGCAGCTAAGTTATGCTGTACATGTGTCTTGTATTATATCTGATTATATGAAATTATGAATC ] [+] EMBL AK073286 [ CAACAGCAGACCACCAAGATTCAGCCACGGCTGGCGGAGGAGCAAGAACCGCCCAAGATCGAGGCACCCGACGCCACCAGCCGCTCGTCGTCGATCTGCCAACTGATGGAGGACGGCGAGGTCGCCGATGAGGGCGCGGACATGGACATGGACATCTGCGGCGGCGTCTCTCCCCTGGTAGTGGACAAGGTTCAGTTCTCGCCGCTTCCGAAGCAAGA AGGATGATGAGTTGATCAACACCAGCGGCGGCGGCGGCTTCTCTCTCCAATCGCCGCCTGCCAAGCAACAAGAGGAAGAATTCGTCCGCGATGCCTCCCCTGTTGCAGTTGACAAGTTCCCTCAAACTGAATCTCCTAGCTCGAGCACTGGCTCCTCTTCTGGATCGTCATCATCTTCATCTTCGAGCGGTGGCTCATCTGGATCATCCTGCAGCGGTTGCTCCTCTTCAGGCAGCGACTCTAACGATGACGGAGACAGTGCGAGCAGCCGCCCTGATAACTCTGAACTTCCCACTGAAGCTGCAGCGAAGCCATTGGAGCAGCAGCAGGTCACAGTCTGCGGCGGCGTCTCTCCCCTGATCGATGAGTTCTCGCCGCTTCCGAAGCAACAAGAGGATGACGAGTTGATCGACGTCACTGGCGGCGTCTCCCCTGTATCAGTCAACAAGTTCCCAGATTCTCCTCGCTCGAGCAGCAGTGGCTCTTCCTCCTCTTCCAGCAGCGGTTCGTCCTCCTCCTCGTCGGAAAGTGACTCAGACGACGACGGCGACAGTGCGAGCAGCAAGCCAGACACCGCAGATCATCCCACTGAAGCTGAGGCGCCGAAGCTTCAGCCATTGGAGCAACATGAGGTCGCGGAGCAAGACAAGAAGCTGATCGCCGAGAGAGCAGCATCTCCGAACACCGAGATGCAGGAGCTGATCGCCAGGGCCCAGGAGAGGCAGAAACTCCGGCTTGAGCTCGAGAGGAAGACGGCGCGCGAGCTCGAGAGGAAGATGGCGCGCGAGCAGCTGCAGGAGATGGAGAGGACGGCACGGCCGGTCTACGACAGCATCGACCCCAGTGTCATGAAGCAGCTCGGGATCTCCGGCGATGCGCAGTACATCGTCAGCCCGGTGAAATCTCGGCACAGCCTGCATCGGCGCGGCGGCGGCGGCCTGCTACAGAAGCTCGGCTTCTTCCTCAAAGAATAGCATGATCCATCATCAATGGTGTCTGTAAAGCTCTGTAGGTTTCTTGTCACATTGGGATCATATGCTCTGAGCCTCTGACAATGATCTCATCAGTTGCTTGCTCTCAAGCCTTTGATGTACTTAAAACCATTGATTAGCTTGCAGCTAAGTTATGCTGTACATGTGTCTTGTATTATATCTGATTATATGAAATTATGAATCGTCTTAAACAACTGTACTGTTTCT] consensusID : consensus_8643#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2068 fasta sequence [GGCGCCCCGTGGGCGCCGCCTGACGGAGCAGATCCACTCGGAGCACCAGGTGGTCGCCGCCCTCCTCGACAAGGCGGAGGCCTTGGTAATGGCGGCCCGCGCCAAGGGCGCCCATGGCGGCGCCGCGGCGGCGGGGGAGCAGCACCCCGATCACCCTAGCCGCGGCAAGAAGAGCGGTCGTTTCTTGCGCCGCCAGGAGACCCCACCGGAGGCCGCCACCGCGATCGGCGGGGATGTCTCTCCCCCCGAGAAGAGGAGGAAGACGACGGCCGCGAGCCCGATCGTGGAGGTGGAGGTTGAGGTGATCGAGCCGACCATGCCCAAGGCGCAGAGGGACCGCCTCTACGGCCTCCTCGCCTCGCTGTCGGCGGACACGCCATTGCCGCCGCACATCGTCGGCCTGATGCGAAGCCAATGCTGCTGCGTCGTGGACCCTAACGGCGAAGAGATGGATGTCGATCTTAGCTCCGCGAAGGATGCTGCCTTGTTCCAGTTGCTGAACCTGCTCGTGGAATTCGCTCAACAGCAGACCACCAAGATTATTGAGGAGCAAGAACCGCCCAAGATCGAGGCATCCGACGCCACCAGCAGCTCGTCGATCTGCGACCTCCTCGAGGACGGTGAGATAGCCGATGAGGGTGCGGCCATGGGCATGGACATCTGCGGCGGCGTCTCTCCCCTCATCGTGGACAGTGCTCAGCTCTTGCCACTTCCGAAGCAACAAGAGGATGACGAGTTGATCGACATCTATGGTGGCGTCTCCCCTGTATCAGTCAACAACTTCCCTGATTCTCCTCGTTCGAGCAGCAGCAGGAGCGACTCCTCATCATCCTCCAGCTCTAGCAATGGCTCTGGCTCCTCCTCATCTTCCAGCAGTGGCGCCTCTTCTGGATCATCATCCTGCGCCGGTTCATCCTCCTCGTCGTCGGGAAGTGACACCGACGCCGACGCCGACAGTGCGAGCAACAGGCCAGACACCACCACAGATCATCCCACCGAAGCTGAGGTGAAGCCAATGGTGGAGCACGAGGTCATGGAGCAAGACAAGAAGCTGACCACTGAGAGGGCAGCAGCATCTCCTGCATCTCAGCTCTGCATCACGGACATGGGCATAGACATCTGCGGCGGCGTCTCTCCCCTGGTCGTGGACAAGGCTCAGTTCTCGCCGCTCCCGAAGCAGCAACAGGAGGATGACGAGTTGATCGACATCTGTGGCGGCATCGACTCCCCTGTATCGGTCAGCAAGTTCCCTGAAACTCCTCGCTCGAGCAGCAGCGACTCTTCCAGCAGTTCATCTTGCAGCGGTTCATCCTCCTCGTCGGAAAGAAACGACAGTGCGAGCAGCAGGCCAGACACCACCGCTGATCATCCCACCGAAGCTGAAGTGAAGCCAATGGAGGAGCAGAAGCTGATCATTGAGAGGGCAGCATCTCCTCACACTGAGATGCAGGAGCTGATCACTGAGAGGGCAGCATCTCCTCACACTGAGATGCAGGAGCTGATCACTGAGAGGGCAGCATCTCCTCGCACTGAGATGCAGGAGCTGATTGCAAGGGCCCAGGAGAGGCAGAAACTCCAGCGTGAGCTCGAGAGAGAGGCAGCGCGTGAGCTCGAGAGAAAGGCGGCGCGTGAGCAGCTGCAGGAGATGAAGAGGACGGCGCAGCCGGTCTTCGACATCATCGATCCCAGAGACATGAAGCAGCTGGGGATCTCCGGCGAGGCGCAGTACATTGTCAGCCCGGTGAAATCTAGGGACAGCCTGCGTCGCCGTGGAGGCGGCCTGCTACAGAGGCTTGGCTTCTTCCTGAAAGCAGAGTTTTGATGAGCTAGAGCAGAGTAGGAATAGGACCATGATCTCGTCTGTTTCTGCTGTCTGTTCGATTCTTTGGTTGCTTGTCAAGCCTGCTTTGAACCTTAGAAATCTGTTTAATGTAATTTACTTGAAGCCATTGATTTATTTGCAGCCAACTTGTGCTGGCAGTAGCCCCATCATATGTATACTGTACATTATTCTGATGATATATGAATGTGATATGATTTGTCTTAAAAAAAAAAAAAAAAAAAAAAC] [+] EMBL AK107553 [GGCGCCCCGTGGGCGCCGCCTGACGGAGCAGATCCACTCGGAGCACCAGGTGGTCGCCGCCCTCCTCGACAAGGCGGAGGCCTTGGTAATGGCGGCCCGCGCCAAGGGCGCCCATGGCGGCGCCGCGGCGGCGGGGGAGCAGCACCCCGATCACCCTAGCCGCGGCAAGAAGAGCGGTCGTTTCTTGCGCCGCCAGGAGACCCCACCGGAGGCCGCCACCGCGATCGGCGGGGATGTCTCTCCCCCCGAGAAGAGGAGGAAGACGACGGCCGCGAGCCCGATCGTGGAGGTGGAGGTTGAGGTGATCGAGCCGACCATGCCCAAGGCGCAGAGGGACCGCCTCTACGGCCTCCTCGCCTCGCTGTCGGCGGACACGCCATTGCCGCCGCACATCGTCGGCCTGATGCGAAGCCAATGCTGCTGCGTCGTGGACCCTAACGGCGAAGAGATGGATGTCGATCTTAGCTCCGCGAAGGATGCTGCCTTGTTCCAGTTGCTGAACCTGCTCGTGGAATTCGCTCAACAGCAGACCACCAAGATTATTGAGGAGCAAGAACCGCCCAAGATCGAGGCATCCGACGCCACCAGCAGCTCGTCGATCTGCGACCTCCTCGAGGACGGTGAGATAGCCGATGAGGGTGCGGCCATGGGCATGGACATCTGCGGCGGCGTCTCTCCCCTCATCGTGGACAGTGCTCAGCTCTTGCCACTTCCGAAGCAACAAGAGGATGACGAGTTGATCGACATCTATGGTGGCGTCTCCCCTGTATCAGTCAACAACTTCCCTGATTCTCCTCGTTCGAGCAGCAGCAGGAGCGACTCCTCATCATCCTCCAGCTCTAGCAATGGCTCTGGCTCCTCCTCATCTTCCAGCAGTGGCGCCTCTTCTGGATCATCATCCTGCGCCGGTTCATCCTCCTCGTCGTCGGGAAGTGACACCGACGCCGACGCCGACAGTGCGAGCAACAGGCCAGACACCACCACAGATCATCCCACCGAAGCTGAGGTGAAGCCAATGGTGGAGCACGAGGTCATGGAGCAAGACAAGAAGCTGACCACTGAGAGGGCAGCAGCATCTCCTGCATCTCAGCTCTGCATCACGGACATGGGCATAGACATCTGCGGCGGCGTCTCTCCCCTGGTCGTGGACAAGGCTCAGTTCTCGCCGCTCCCGAAGCAGCAACAGGAGGATGACGAGTTGATCGACATCTGTGGCGGCATCGACTCCCCTGTATCGGTCAGCAAGTTCCCTGAAACTCCTCGCTCGAGCAGCAGCGACTCTTCCAGCAGTTCATCTTGCAGCGGTTCATCCTCCTCGTCGGAAAGAAACGACAGTGCGAGCAGCAGGCCAGACACCACCGCTGATCATCCCACCGAAGCTGAAGTGAAGCCAATGGAGGAGCAGAAGCTGATCATTGAGAGGGCAGCATCTCCTCACACTGAGATGCAGGAGCTGATCACTGAGAGGGCAGCATCTCCTCACACTGAGATGCAGGAGCTGATCACTGAGAGGGCAGCATCTCCTCGCACTGAGATGCAGGAGCTGATTGCAAGGGCCCAGGAGAGGCAGAAACTCCAGCGTGAGCTCGAGAGAGAGGCAGCGCGTGAGCTCGAGAGAAAGGCGGCGCGTGAGCAGCTGCAGGAGATGAAGAGGACGGCGCAGCCGGTCTTCGACATCATCGATCCCAGAGACATGAAGCAGCTGGGGATCTCCGGCGAGGCGCAGTACATTGTCAGCCCGGTGAAATCTAGGGACAGCCTGCGTCGCCGTGGAGGCGGCCTGCTACAGAGGCTTGGCTTCTTCCTGAAAGCAGAGTTTTGATGAGCTAGAGCAGAGTAGGAATAGGACCATGATCTCGTCTGTTTCTGCTGTCTGTTCGATTCTTTGGTTGCTTGTCAAGCCTGCTTTGAACCTTAGAAATCTGTTTAATGTAATTTACTTGAAGCCATTGATTTATTTGCAGCCAACTTGTGCTGGCAGTAGCCCCATCATATGTATACTGTACATTATTCTGATGATATATGAATGTGATAT ] [-] EMBL AA750500 [ GCAGAGTA GAATA GACCATGA C CG CTG TTCTGCTG CTG TCGA TCTTTGG TGC TGTCAAGCCTGCTTTGAACCTTAGAAATCTG TTAATGTAATTTACTTGAAGCCATTGATTTA TTGCAGCCAACTTGTGCTGGCAGTAGCCCCATCATATGTATACTGTACATTATTCTGATGATATATGAATGTGATATGATTTGTCTTAAAAAAAAAAAAAAAAAAAAAAC] [-] EMBL AA750608 [ AGGACCATGATCTCGTCTGTTTCTGCTGTCTGTTCGATTCTTTGGTTGCTTGTCAAGCCTGCTTTGAACCTTAGAAATCTGTTTAATGTAATTTACTTGAAGCCATTGATTTATTTGCAGCCAACTTGTGCTGGCAGTAGCCCCATCATATGTATACTGTACATTATTCTGATGATATATGAATGTGATATGATTTGTCTTAAAAAAAAAAAAAAAAAAAAAAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8643#0 TCCATCCATAAATCTCGTTTCGTCCTCGCCCGCCGCCTCCGCTTCCCATTCCCGCCGCCC 60 consensus_8643#1 ------------------------------------------------------------ consensus_8643#0 GCTTCCTCCACCTGATCCTTCGCCCTCGATTCGCTGCACTTGATCCGCCGCTGCGCCGCC 120 consensus_8643#1 ------------------------------------------------------------ consensus_8643#0 TCTCGATTCGATCCATCTCTGTGCCCTAGCTACCCTCGCAGCAGAGTCCACTCCACCCGA 180 consensus_8643#1 ------------------------------------------------------------ consensus_8643#0 GGTGCGACATGGCCGTCGGGATGGCGCCTCCTCCTCCCACGGCCGCCGCGCTGCCGTCCC 240 consensus_8643#1 -------------------------------------------------GGCGCCCCGTG 11 * *** consensus_8643#0 GCCGCCGCCTCAGGGAGCGGATCCAGTCGGAGCGCCAGGTGGTCGGCGGCCTCCTCAAGA 300 consensus_8643#1 GGCGCCGCCTGACGGAGCAGATCCACTCGGAGCACCAGGTGGTCGCCGCCCTCCTCGACA 71 * ******** * ***** ****** ******* *********** ** ******* * * consensus_8643#0 AGGCGGAGGCCTTGGT------GGCCCGCGCCAAGGAGGACGTCCATGGCGGGCGCGCCG 354 consensus_8643#1 AGGCGGAGGCCTTGGTAATGGCGGCCCGCGCCAAGGG---CGCCCATGGCG---GCGCCG 125 **************** ************** ** ******** ****** consensus_8643#0 CGGCGGCGCACTCCGAGGCCTGCGCTCTCCCTCGCCGCGGC------------CGTTTCT 402 consensus_8643#1 CGGCGGCGGGGGAGCAGCACCCCGATCACCCTAGCCGCGGCAAGAAGAGCGGTCGTTTCT 185 ******** ** * ** ** **** ******** ******* consensus_8643#0 TGCGTCGTCCGGAGGCCCGACCGGAGGCGGAGGCCACCGCCGCGATGGACGGGGCTGCCT 462 consensus_8643#1 TGCGCCGCCAGGAGACCCCACCGGAGGC------CGCCACCGCGATCGGCGGGGATGTCT 239 **** ** * **** *** ********* * ** ******* * ***** ** ** consensus_8643#0 CTCCCCGCAAGAAGAGGCGGAAGGCGGCGACCTCCGCGAGCTCGATCGTGGAGGTGGAGG 522 consensus_8643#1 CTCCCCCCGAGAAGAGGAGGAAGACGACGGC---CGCGAGCCCGATCGTGGAGGTGGAGG 296 ****** * ******** ***** ** ** * ******* ****************** consensus_8643#0 T------GATCGAGCCGACCATGCCCAAGGCGCAGAGGGACCGCCTCTACGGCCTCCTCT 576 consensus_8643#1 TTGAGGTGATCGAGCCGACCATGCCCAAGGCGCAGAGGGACCGCCTCTACGGCCTCCTCG 356 * **************************************************** consensus_8643#0 CCTCGCTGTCGGCGGAGATGCCATTGCCGCCGCACATCGTGGCCTTGATGCAGAGCCAGT 636 consensus_8643#1 CCTCGCTGTCGGCGGACACGCCATTGCCGCCGCACATCGTCGGCCTGATGCGAAGCCAAT 416 **************** * ********************* * * ****** ***** * consensus_8643#0 GCTGCTGCGTCGTGGACCCTAATGGCGAAGAGATGGATGTGGACCTTGGCTCCGCGAAGG 696 consensus_8643#1 GCTGCTGCGTCGTGGACCCTAACGGCGAAGAGATGGATGTCGATCTTAGCTCCGCGAAGG 476 ********************** ***************** ** *** ************ consensus_8643#0 ATGCTGCCTTGTTCCAGTTGCTGAACCTGCTCGAGGAATTCGCTCAACAGCAGACCACCA 756 consensus_8643#1 ATGCTGCCTTGTTCCAGTTGCTGAACCTGCTCGTGGAATTCGCTCAACAGCAGACCACCA 536 ********************************* ************************** consensus_8643#0 AGATTCAGCCACGGCTGGCGGAGGAGCAAGAACCGCCCAAGATCGAGGCACCCGACGCCA 816 consensus_8643#1 AGATT------------ATTGAGGAGCAAGAACCGCCCAAGATCGAGGCATCCGACGCCA 584 ***** ****************************** ********* consensus_8643#0 CCAGCCGCTCGTCGTCGATCTGCCAACTGATGGAGGACGGCGAGGTCGCCGATGAGGGCG 876 consensus_8643#1 CCAGCAGCTCGTCG---ATCTGCGACCTCCTCGAGGACGGTGAGATAGCCGATGAGGGTG 641 ***** ******** ****** * ** * ******** *** * *********** * consensus_8643#0 CGGACATGGACATGGACATCTGCGGCGGCGTCTCTCCCCTGGTAGTGGACAAGGTTCAGT 936 consensus_8643#1 CGGCCATGGGCATGGACATCTGCGGCGGCGTCTCTCCCCTCATCGTGGACAGTGCTCAGC 701 *** ***** ****************************** * ******* * **** consensus_8643#0 TCTCGCCGCTTCCGAAGCAAGAAGAGGATGATGAGTTGATCAACACCAGCGGCGGCGGCG 996 consensus_8643#1 TCTTGCCACTTCCGAAGCAACAAGAGGATGACGAGTTGATCGACATCTATGGTGGCGTCT 761 *** *** ************ ********** ********* *** * ** **** * consensus_8643#0 GCTTC--------------TCTCTCCAATCGCCGCCTGCCAAGCAACAAGAGGAAGAATT 1042 consensus_8643#1 CCCCTGTATCAGTCAACAACTTCCCTGATTCTCCTCGTTCGAGCAGCAGCAGGAGCGACT 821 * ** * ** * * * **** ** **** * * consensus_8643#0 CGTCCGCGATGCCTCCCCTGTTGCAGTTGACAAGTTCCCTCAAACTGAATCTCC--TAGC 1100 consensus_8643#1 CCTCATC-ATCCTCCAGCTCTAGCAATGGCTCTGGCTCCTCCTCATCTTCCAGCAGTGGC 880 * ** * ** * * ** * *** * * * **** * * * * ** consensus_8643#0 TCGAGCACTGGCTCCTC-TTCTGGATCG--TCATCATCTTCATCTTCGAGCGGTGGCTC- 1156 consensus_8643#1 GCCTCTTCTGGATCATCATCCTGCGCCGGTTCATCCTCCTCGTCGTCGGGAAGTGACACC 940 * **** ** ** * *** ** ***** ** ** ** *** * *** * * consensus_8643#0 -------ATCTGGATCATCCT-GCAGCGGTT---GCTCCTCTTCAGGCAGCGACTCTAAC 1205 consensus_8643#1 GACGCCGACGCCGACAGTGCGAGCAACAGGCCAGACACCACCACAGATCATCCCACCGAA 1000 * ** * * *** * * * ** * *** * * * consensus_8643#0 GATGA--CGGAGACAGTGC--GAGCA-GCCGCCCTG----ATAACTCTGAACTTCCCACT 1256 consensus_8643#1 GCTGAGGTGAAGCCAATGGTGGAGCACGAGGTCATGGAGCAAGACAAGAAGCTGACCACT 1060 * *** * ** ** ** ***** * * * ** * ** * ** ***** consensus_8643#0 GAAGCTGCAGCGAAGCCA--------TTGGAGCAGCAGCA-------GGTCACAG---TC 1298 consensus_8643#1 GAGAGGGCAGCAGCATCTCCTGCATCTCAGCTCTGCATCACGGACATGGGCATAGACATC 1120 ** ***** * * * * *** ** ** ** ** ** consensus_8643#0 TGCGGCGGCGTCTCTCCCCTGATCGATGA---------GTTCTCGCCGCTTCCGAAGCAA 1349 consensus_8643#1 TGCGGCGGCGTCTCTCCCCTGGTCGTGGACAAGGCTCAGTTCTCGCCGCTCCCGAAGCAG 1180 ********************* *** ** ************ ******** consensus_8643#0 CAA---GAGGATGACGAGTTGATCGACGTCACTGGCGGCGTC---TCCCCTGTATCAGTC 1403 consensus_8643#1 CAACAGGAGGATGACGAGTTGATCGACATCTGTGGCGGCATCGACTCCCCTGTATCGGTC 1240 *** ********************* ** ******* ** *********** *** consensus_8643#0 AACAAGTTCCCAGATTCTCCTCGCTCGAGCAGCAGTGGCTCTTCCTCC---TCTTCCAGC 1460 consensus_8643#1 AGCAAGTTCCCTGAAACTCCTCGCTCGAGCAGCAGCGACTCTTCCAGCAGTTCATCTTGC 1300 * ********* ** ******************* * ******* * ** ** ** consensus_8643#0 AGCGGTTCGTCCTCCTCCTCGTCGGAAAGTGAC---------------TCAGACGACGAC 1505 consensus_8643#1 AGCGGTTCATCCTCCTCGTCGGAAAGAAACGACAGTGCGAGCAGCAGGCCAGACACCACC 1360 ******** ******** *** ** *** ***** * * consensus_8643#0 GGCGAC-----------------AGTGCGAGCAGCAAGCCAGACACCGCAGATCATC--- 1545 consensus_8643#1 GCTGATCATCCCACCGAAGCTGAAGTGAAGCCAATGGAGGAGCAGAAGCTGATCATTGAG 1420 * ** **** ** ** ** ****** consensus_8643#0 ----------CCACTGAAGCTGAGGCGCCGAAGCTT-CCGCCATTGGAGCAACATGAGGT 1594 consensus_8643#1 AGGGCAGCATCTCCTCACACTGAGATGCAGGAGCTGATCACTGAGAGGGCAGCATCTCCT 1480 * ** * ***** ** * **** * * * *** *** * consensus_8643#0 CGCGGAGCAAGACAAGAAGCTGATCGCCGAGAGAGCAGCATCTCCGAACACCGAGATGCA 1654 consensus_8643#1 CACACTGAGATGCAGGA-GCTGATCACTGAGAGGGCAGCATCTCCTCGCACTGAGATGCA 1539 * * * * ** ** ******* * ***** *********** *** ******** consensus_8643#0 GGAGCTGATCGCCAGGGCCCAGGAGAGGCAGAAACTCCGGCTTGAGCTCGAGAGGAAGAC 1714 consensus_8643#1 GGAGCTGATTGCAAGGGCCCAGGAGAGGCAGAAACTCCAGCGTGAGCTCGAGAGAGAGGC 1599 ********* ** ************************* ** ************ ** * consensus_8643#0 GGCGCGCGAGCTCGAGAGGAAGATGGCGCGCGAGCAGCTGCAGGAGATGGAGAGGACGGC 1774 consensus_8643#1 AGCGCGTGAGCTCGAGAGAAAGGCGGCGCGTGAGCAGCTGCAGGAGATGAAGAGGACGGC 1659 ***** *********** *** ****** ****************** ********** consensus_8643#0 ACGGCCGGTCTACGACAGCATCGACCCCAGTGTCATGAAGCAGCTCGGGATCTCCGGCGA 1834 consensus_8643#1 GCAGCCGGTCTTCGACATCATCGATCCCAGAGACATGAAGCAGCTGGGGATCTCCGGCGA 1719 * ******** ***** ****** ***** * ************ ************** consensus_8643#0 TGCGCAGTACATCGTCAGCCCGGTGAAATCTCGGCACAGCCTGCATCGGCGCGGCGGCGG 1894 consensus_8643#1 GGCGCAGTACATTGTCAGCCCGGTGAAATCTAGGGACAGCCTGCGTCGCCGTGGAGGCGG 1779 *********** ****************** ** ********* *** ** ** ***** consensus_8643#0 CGGCCTGCTACAGAAGCTCGGCTTCTTCCTCAAAGAATAGCATGATCCATCATCAATGGT 1954 consensus_8643#1 ---CCTGCTACAGAGGCTTGGCTTCTTCCTGAAAGCAGAGTTTTGATGAGCTAGAGCAGA 1836 *********** *** *********** **** * ** * * * * * consensus_8643#0 GTCTGTAAAGCTCTGTAG----GTTTCTTGTCACATTGGGATCATATGCTCTGAGCCTCT 2010 consensus_8643#1 GTAGGAATAGGACCATGATCTCGTCTGTTTCTGCTGTCTGTTCG-ATTCTTTGGTTGCTT 1895 ** * * ** * * ** * ** * * * ** ** ** ** * consensus_8643#0 GACAA---TGATCTCATCAGTTGCTTGCTCTCAAGCCTTTGATGTACTTAAAACCATTGA 2067 consensus_8643#1 GTCAAGCCTGCTTTGAACCTTAGAAATCTGTTTAA--TGTAATTTACTTGAAGCCATTGA 1953 * *** ** * * * * * * ** * * * * ** ***** ** ******* consensus_8643#0 TTAGCTTGCAGCTAAGTTATGCTG-------------TACATGTGTCTTGTATTATAT-C 2113 consensus_8643#1 TTTATTTGCAGCCAACTTGTGCTGGCAGTAGCCCCATCATATGTATACTGTACATTATTC 2013 ** ******* ** ** ***** * **** * **** *** * consensus_8643#0 TGAT--TATATGAA---ATTATGAATCGTCTTAAACAACTGTACTGTTTCT---- 2159 consensus_8643#1 TGATGATATATGAATGTGATATGATTTGTCTTAAAAAAAAAAAAAAAAAAAAAAC 2068 **** ******** ***** * ******** ** * |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||