These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8652#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1412 fasta sequence [ATCCTCCCACTCCACCTCGGAGCTGAGCTCTGCTTCTCTCCCGATCTCTCCACCCACCGCAGCAGCATCCTTTCGACCTCTCTAGGGTTCCAGCCTCGAGTTGGCCTCGTCCCCCCCCCCCCCCCCCACATTCGCTGCGAGGTTGCTGCTCGCTTCACTTGTCTTCGGTTTGATTTCCCCCCACCTAACTGATTCTGATTGATACGGCTCGGCTCGTGTGTGCGGCTCACTTAGGTTTGGGATTCTCTTCCGGATTGGATTGGTGGAGTGGCAGGGAATTGTTAGTTCTGGTGTGGTTTGTGGTTAAGAGAAGGGGGAAATAGCTATGGAGTGTCTGACCACAAGTTTTACTAGGAATCCGGGAAGGGAGTATAGTCTCATATGTCCGAGCGAAGCTCTGTCTGAAAAACAAAGGATTCAAAGAAGGGTCCTATGCTATTTTCCAGCTTCCACAAACTCAAGACGATGTCGCAAGTTCACAACTATGGCATATCCTGTTAGCCCAATAGCTGGCAGACGTTCAAATTGGAGATCTTTTGCTGCAAGTCTGAATTTGGAAGATGGTCCTGCATCCTCTGACTCAACATCATCCCCTTCAGAGCAAACTAGTGATGGTGGTGAAGTTTATGGTGACCCTTCTGAAAATCTGAATTCTCGGAAACTTAAATCTGACGAGTTGAAATCTCTTTTGGCTGATTCAGAACGATCTAAGCTTTTGAAAAAGCTTAGTGAAGCAAACCAATACAACCGGTTCCTCAAGAGACAGTTGCAAATGAAGGATAATGACGTTGTGAAGTTCAAGAGTGAACTTGCCGTTATGGAACTTGAACTGCAGGCTCTGGTTGCCCTAGCTGAAGAGATTGCTAATTTTGATGTTCCATCTGGGTCTAGGAAGATAAATGGAAAATATATCCAGTCACATCTTCTCACCAGATTAGAAGCTGTTCATGATAAGGTTATGGAACAAATTAAGGATGTAGACTCTTTAAAGCACCAAGAAATTTCTGTCTTCTGGGTTGGCATTGCTGAGAATGTACAAATTATGGGCTCCTTCGATGGCTGGTCCCAGGGAGAGGCAATGTCCATGGAGTATTCAGGTTACCAAGCAAGATTCTCTGCAACTCTGAATCTTAGACCTGGGAGGTATGAGATCAAATTCTTGGTTGATGGAGAGTGGAGGCTGTCACTGGAGTACCCAATTGATGGCGAAGGTTCAATGCAGAACAATATACTTGTTGTAAATTAATGTAGATATCTGTTGGCTCCTAGTTTGCCATAGTTGTAACTTGCAGCTATAAAACCTAGCGCAAGATTGAACTGTACTCGATTGCTATCATGCATCCGATTTGCAAAATTTCACTTTACCATGAAATGCAAGGCCTTTTTTTCCTGGTTGGAAAAAAAAAAAAAAA] [+] EMBL AK072017 [ATCCTCCCACTCCACCTCGGAGCTGAGCTCTGCTTCTCTCCCGATCTCTCCACCCACCGCAGCAGCATCCTTTCGACCTCTCTAGGGTTCCAGCCTCGAGTTGGCCTCGTCCCCCCCCCCCCCCCCCACATTCGCTGCGAGGTTGCTGCTCGCTTCACTTGTCTTCGGTTTGATTTCCCCCCACCTAACTGATTCTGATTGATACGGCTCGGCTCGTGTGTGCGGCTCACTTAGGTTTGGGATTCTCTTCCGGATTGGATTGGTGGAGTGGCAGGGAATTGTTAGTTCTGGTGTGGTTTGTGGTTAAGAGAAGGGGGAAATAGCTATGGAGTGTCTGACCACAAGTTTTACTAGGAATCCGGGAAGGGAGTATAGTCTCATATGTCCGAGCGAAGCTCTGTCTGAAAAACAAAGGATTCAAAGAAGGGTCCTATGCTATTTTCCAGCTTCCACAAACTCAAGACGATGTCGCAAGTTCACAACTATGGCATATCCTGTTAGCCCAATAGCTGGCAGACGTTCAAATTGGAGATCTTTTGCTGCAAGTCTGAATTTGGAAGATGGTCCTGCATCCTCTGACTCAACATCATCCCCTTCAGAGCAAACTAGTGATGGTGGTGAAGTTTATGGTGACCCTTCTGAAAATCTGAATTCTCGGAAACTTAAATCTGACGAGTTGAAATCTCTTTTGGCTGATTCAGAACGATCTAAGCTTTTGAAAAAGCTTAGTGAAGCAAACCAATACAACCGGTTCCTCAAGAGACAGTTGCAAATGAAGGATAATGACGTTGTGAAGTTCAAGAGTGAACTTGCCGTTATGGAACTTGAACTGCAGGCTCTGGTTGCCCTAGCTGAAGAGATTGCTAATTTTGATGTTCCATCTGGGTCTAGGAAGATAAATGGAAAATATATCCAGTCACATCTTCTCACCAGATTAGAAGCTGTTCATGATAAGGTTATGGAACAAATTAAGGATGTAGACTCTTTAAAGCACCAAGAAATTTCTGTCTTCTGGGTTGGCATTGCTGAGAATGTACAAATTATGGGCTCCTTCGATGGCTGGTCCCAGGGAGAGGCAATGTCCATGGAGTATTCAGGTTACCAAGCAAGATTCTCTGCAACTCTGAATCTTAGACCTGGGAGGTATGAGATCAAATTCTTGGTTGATGGAGAGTGGAGGCTGTCACTGGAGTACCCAATTGATGGCGAAGGTTCAATGCAGAACAATATACTTGTTGTAAATTAATGTAGATATCTGTTGGCTCCTAGTTTGCCATAGTTGTAACTTGCAGCTATAAAACCTAGCGCAAGATTGAACTGTACTCGATTGCTATCATGCATCCGATTTGCAAAATTTCA ] [-] EMBL CA759665 [ CAATCCAACCGGTTCCTCCAGAGGCAGTTGCAAATGAAGGATAATGGCGTTGTGAAGTTCAAGAGTGAACTTGCCGTTATGGAACTTGAACTGCAGGCTCTGGTTGCCCTAGCTGAAGAGATTGCTAATTNTGATGTTCCATCTGGGTCTAGGAAGATAAATGGAAAATATATCCAGTCACATCTTCTCACCAGATTAGAAGCTGTTCATGATAAGGTTATGGAACAAATTAAGGATGTAGACTCTTTAAAGCACCAAGAAATTTCTGTTTTTTGGGTTGGCATTGCTGAGAATGTACAAATTATGGGCTCCTTCGATGGCTGGTCCCAGGGAGAGGCAATGTCCATGGAGTATTCAGGTTACCAAGCAAGATTCTTTGCAACTTTGAATTTTAGACCTGGGAGGTATGAGATCAAATTCTTGGTTGATGGAGAGTGGAGGCTGTCACTGGAGTACCCAATTGATGGCGAAGGTTCAATGCAGAACAATATACTTGTTGTAAATTAATGTAGATATCTGTTGGCTCCTAGTTTGCCATAGTTGTAACTTGCAGCTATAAAACCTAGCGCAAGATTGAACTGTACTCGATTGCTATCATGCATCCGATTTGCAAAATTTCACTTTACCATGAAATGCAAGGCCTTTTTTTCCTGGTTGGAAAAAAAAAAAAAAA] [+] EMBL AA751387 [ ATGGAACTTGAACTGCAGGCTCTGGTTGCCCTAGCTGAAGAGATTGCTAATTTTNATGTTCCATCTGGGTCTAGGAAGATAAATGGAAAATATATCCAGTCACATCTTNNNACCAGATTAGAAGCTGTTCATGATAAGGTTATGGAACAAATTAAGGATGTAGACTCTTTAAANCACCAAGAAATTTCTGTCTTCTGGGTTGGCATTGCTGAGAATGTACAAAT ] [+] EMBL AA750149 [ GGAACTTGAACTGCAGGCTCTGGTTGCCCTAGCTGAAGAGATTGCTAATTTTGATGTTCCATCTGGGTCTAGGAAGATAAATGGAAAATATATCCAGTCACATCTTCTCACCAGATTAGAAGCTGTTCATGATAAGGTTATGGAACAAATTAAGGATGTAGAC C NSAAAGCA ] [+] EMBL AK103955 [ GTCTAGGAAGATAAATGGAAAATATATCCAGTCACATCTTCTCACCAGATTAGAAGCTGTTCATGATAAGGTTATGGAACAAATTAAGGATGTAGACTCTTTAAAGCACCAAGAAATTTCTGTCTTCTGGGTTGGCATTGCTGAGAATGTACAAATTATGGGCCCCTTCGATGGCTGGTCCCAGGGAGAGGCAATGTCCATGGAGTATTCAGGTTACCAAGCAAGATTCTCTGCAACTCTGAATCTTAGACCTGGGAGGTATGAGATCAAATTCTTGGTTGATGGAGAGTGGAGGCTGTCACTGGAGTACCCAATTGATGGCGAAGGTTCAATGCAGAACAATATACTTGTTGTAAATTAATGTAGATATCTGTTGGCTCCTAGTTTGCCATAGTTGTAACTTGCAGCTATAAAACCTAGCGCAAGATTGAACTGTACTCGATTGCTATCATGCATCCGATTTGCAAAATTTCACTTTACCATGAAATGCAAGGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||