These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8653#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1446 fasta sequence [AGCTTGCATTAGTTACCATTGGAGGAGGAAAGGAACTAGAGGAAAAGCTTGTGGGCTTTGTAGGTAAGACCAACTAGTGAGACCATCGTAAACCACATGTTCACCAAATGGATACAGAGCTACCGCGATCTTCCTCTCATGATTAACCAGTGGGCTAATGTCACAAGATGGGAAATGAGGACTAAGCCATTCATCAGAACTCTTGAATTTCTATGGCAAGAAGGTCATACAGCTCATGCCACCCTTGAAGAGGCAGAAAAGGAGGCAATGCAAATGATTGATGTATATACAAAATTTGCATACGAGCAAGCTGCAATCCCTGTTATTCCGGGTCGAAAATCAAGAGTGGAAACGTTTGCTGGTGCTAATCGGACCTACACTATAGAAGCTATGATGGGTGACAGGAAGGCTTTACAGGCTGGAACCAGCCACAACCTTGGACAGAACTTCTCCCGTGCCTTTGGAACACAGTTTATGGATGAAAATAGCCAAATCGAACATGTTTGGCAGACTTCTTGGGCTATTAGCACTCGGTTTGTTGGTGGGATCATCATGACCCATGGTGATGATGCTGGCTTAATGCTTCCGCCAAATATTGCACCCATCCAGGTGGTAATAGTGCCTATATGGAAAAAGGGAGATGAAAAGAGTGCTGTTATGGAAGCTGTGTCTTCAGTTCAAAACACACTCAAAGAAGCAGGAATTAGAGTCAAAGTGGATGACTCGGAGTTGCGGACACCAGGATGGAAGTTCAATTTTTACGAGATGAAGGGAGTTCCTATAAGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGTTGTTATTTCTAGGCGAGATATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCAATACTGGTGGACCATATAAAAGGTCGTCTAGTGGAAATCCAAGCATCCCTTCTACAGAAGGCCATTGCA-TTCCGTGATAGTAACATAGTTGATGTAAGCTCATAT-GGAGAACT-GAAGGAGGCCATT-GCCGA-GGGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTGAAGGTGAAAGAAGAGACCAGCGCCACCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGCGCTAAGAAATGCTTCATGACTGGCAATCCAGCCGAGGAAGTTGCAATTTTTGCGAAGTCGTATTAGTTCATGCTTTCTCTAATAGTCTGGTTCCAAGGATCAAAGCATTTTTTTTCCAGCTATATTTTCTCCA-TTTCCCAGATTCTCTGGGATCTTTTCTGATCATAAATTACCCATTGAATGCTTGTGCTTCTGATATTTCTAGTGTAAATTAGCGATCGAGTAGTTAAATCTCTGTCCTGCTTGTCGTATTAGGACAAAACTCACAACACGGTGCAATTGTATAATCAAAGTTTTTTAAGGGAAGTTCACAGC] [+] EMBL AK106594 [AGCTTGCATTAGTTACCATTGGAGGAGGAAAGGAACTAGAGGAAAAGCTTGTGGGCTTTGTAGGTAAGACCAACTAGTGAGACCATCGTAAACCACATGTTCACCAAATGGATACAGAGCTACCGCGATCTTCCTCTCATGATTAACCAGTGGGCTAATGTCACAAGATGGGAAATGAGGACTAAGCCATTCATCAGAACTCTTGAATTTCTATGGCAAGAAGGTCATACAGCTCATGCCACCCTTGAAGAGGCAGAAAAGGAGGCAATGCAAATGATTGATGTATATACAAAATTTGCATACGAGCAAGCTGCAATCCCTGTTATTCCGGGTCGAAAATCAAGAGTGGAAACGTTTGCTGGTGCTAATCGGACCTACACTATAGAAGCTATGATGGGTGACAGGAAGGCTTTACAGGCTGGAACCAGCCACAACCTTGGACAGAACTTCTCCCGTGCCTTTGGAACACAGTTTATGGATGAAAATAGCCAAATCGAACATGTTTGGCAGACTTCTTGGGCTATTAGCACTCGGTTTGTTGGTGGGATCATCATGACCCATGGTGATGATGCTGGCTTAATGCTTCCGCCAAATATTGCACCCATCCAGGTGGTAATAGTGCCTATATGGAAAAAGGGAGATGAAAAGAGTGCTGTTATGGAAGCTGTGTCTTCAGTTCAAAACACACTCAAAGAAGCAGGAATTAGAGTCAAAGTGGATGACTCGGAGTTGCGGACACCAGGATGGAAGTTCAATTTTTACGAGATGAAGGGAGTTCCTATAAGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGTTGTTATTTCTAGGCGAGATATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCAATACTGGTGGACCATATAAAAGGTCGTCTAGTGGAAATCCAAGCATCCCTTCTACAGAAGGCCATTGCA TTCCGTGATAGTAACATAGTTGATGTAAGCTCATAT GGAGAACT GAAGGAGGCCATT GCCGA GGGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTGAAGGTGAAAGAAGAGACCAGCGCCACCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGCGCTAAGAAATGCTTCATGACTGGCAATCCAGCCGAGGAAGTTGCAATTTTTGCGAAGTCGTATTAGTTCATGCTTTCTCTAATAGTCTGGTTCCAAGGATCAAAGCATTTTTTTTCCAGCTATATTTTCTCCA TTTCCCAGATTCTCTGGGATCTTTTCTGATCATAAATTACCCATTGGATGCTTGTGCTTCTGATATTTCTAGTGTAAATTAGCGATCGAGTAGTTAAATCTCTGTCCTGCTTGTCGTATTAGGACAAAACTCACAACACGGTGCAATTGTATAATCAAAGT ] [+] EMBL CA763952 [ AGTGGGCTAATGTCACAAGATGGGAAATGAGGACTAAGCCATTCATCAGAACTCTTGAATTTCTATGGCAAGAAGGTCATACAGCTCATGCCACCCTTGAAGAGGCAGAAAAGGAGGCAATGCAAATGATTGATGTATATACAAAATTTGCATACGAGCAAGCTGCAATCCCTGTTATTCCGGGTCGAAAATCAAGAGTGGAAACGTTTGCTGGTGCTAATCGGACCTACACTATAGAAGCTATGATGGGTGACAGGAAGGCTTTACAGGCTGGAACCAGCCACAACCTTGGACAGAACCTCTCCCGTGCCTTTGGAACACAGTTTATGGATGAAAATAGCCAAATCGAACATGTTTGGCAGACTTCTTGGGCTATTAGCACTCGGTTTGTCGGTGGGATCATCATGACCCATGGTGATGATGCTGGCTTAATGCTTCCGCCAAATATTGCACCCATCCAGGTGGTAATAGTGCCTATATGGAAAAAGGGAGATGAAAAGAGTGCTGTTATGGAAGCTGTGTCTTCAGTTCAAAACACACTCAAAGAAGCAGGAATTAGAGTCAAATTGGATGACTCGGAGTTGCGGACACCAGGATGGAAGNTCAATTTTTACGAGATGAANGGAGTTCCTATAAGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGNTGGTATTTCTAGGCGAGATATNCCTGGAAAACAAGGAAANGAGTTTGGAGTGNCTATGGATCCATCAATACTGGNGGACCATATAAAAGGTCGNCCAGNGGNAATNCAAGCATNCCTTNTACAGAAAGNCATTGCATTTCCGGGATAGTAACATAGTTGATGNAAGCTCATATGGGAGAACTGGAAGGAGGNCATTGGCCGAGGGGTNAATGG ] [+] EMBL CB679316 [ TGGGTCTTAAGAAGGCTTTACAGGCTGGAACCAGCCACAACCTTGGACAGAACTTCTCCCGTGCCTTTGGAACACAGTTTATGGATGAAAATAGCCAAATCGAACATGTTTGGCAGACTTCTTGGGCTATTAGCACTCGGTTTGTTGGTGGGATCATCATGACCCATGGTGATGATGCTGGCTTAATGCTTCCGCCAAATATTGCACCCATCCAGGTGGTAATAGTGCCTATATGGAAAAAGGGAGATGAAAAGAGTGCTGTTATGGAAGCTGTGTCTTCAGTTCAAAACACACTCAAAGAAGCAGGAATTACAGTCAAAGTGGATGACTCGGAGTTGCGGACACCAGGATGGAAGTTCAATTTTTACGAGATGAAGGGAGTTCCTATAAGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGTTGTTATTTCTAGGCGAGATATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCAATACTGGTGGACCATATAAAAGGTCGTCTAGTGGAAATCCAAGCATCCCTTCTACAGAAGGCCATTGCA TTCCGTGATAGTAACATAGTTGATGTAAGCTCATAT GGAGAACT GAAGGAGGCCATT GCCGA GGGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTGAAGGTGAAAGAAGAGACCAGCGCCACCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGCGCTAAGAGATGCTTCATGACTGGCAATCCAGCCGAGGAAAGTGCAATTTTTGCGAAGTCGTATTAGTTCA ] [-] EMBL CB679317 [ CAATTTTTACGAGATGAAGGGAGTTCCTATAAGACTAGAAATTGGTCCCCGTGATGTCACAAACAAAAGTGTTGTTATTTCTAGGCGAGATATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCAATACTGGTGGACCATATAAAAGGTCGTTTAGTGGAAATCCAAGCATCCCTTTTACAGAAGGCCATTGCA TTCCGTGATAGTAACATAGTTGATGTAAGCTCATAT GGAGAACT GAAGGAGGCCATT GCCGA GGGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTGAAGGTGAAAGAAGAGACCAGCGCCCCCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGCGCTAAGAAATGCTTCATGACTGGCAATCCAGCCGAGGAAGTTGCAATTTTTGCGAAGTCGTATTAGTTCATGCTTTCTCTAATAGTCTGGTTCCAAGGATCAAAGCATTTTTTTTCCAGCTATATTTTCTCCATTTTCCCAGATTTTTTGGGATCTTTTCTGATCATAAATTACCCATTGAATGCTTGTGCTTCTGATATTTTTAGTGTAAATTAGCGATCGAGTAGTTAAATCTCTGTCCTGCTTGTCGTATTAGGACAAAACTCACAACACGGTGCAATTGTATAATCAAAGTTTTTTAAGGGAAGTTC ] [+] EMBL CB681062 [ AAAAGCCTTGTTATTTCTAGGCGAGATATCCCTGGAAAACAAGGAAAGGAGTTTGGAGTGTCTATGGATCCATCAATACTGGTGGACCATATAAAAGGTCGTCTAGTGGAAATCCAAGCATCCCTTCTACAGAAGGCCATTGCA TTCCGTGATAGTAACATAGTTGATGTAAGCTCATAT GGAGAACT GAAGGAGGCCATT GCCGA GGGTAAATGGGCGAGAGGGCCATGGTCAGCTAGCGATGCTGATGAGCTGAAGGTGAAAGAAGAGACCAGCGCCACCATCAGATGCTTCCCGTTCGAGCAGCCAGAGGGCGCTAAGAAATGCTTCATGACTGGCAATCCAGCCGAGGAAGTTGCAATTTTTGCGAAGTCGTATTAGTTCATGCTTTCTCTAATAGTCTGGTTCCAAGGATCAAAGCATTTTTTTTCCAGCTATATTTTCTCCATTTTCCCAGATTCTCTGGGATCTTTTCTGATCATAAATTACCCATTGAATGCTTGTGCTTCTGATATTTCTAGTGTAAATTAGCGATCGAGTAGTTAAATCTCTGTCCTGCTTGTCGTATTAGGACAAAACTCACAACACGGTGCAATTGTATAATCAAAGTTCTCTTACTGAAGTTCACAGC] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||