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Oryza sativa
cluster # 8666 cluster # 8666       Sequences # 5       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8666#0 length = 2360 sequences # 1  
 consensus_8666#1 length = 1602 sequences # 3  
consensus_8666#2 length = 459 sequences # 1  
consensusID : consensus_8666#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2360
fasta sequence 
                              [GAACGAGCCATACCACACGCGCGGCCGCGCCAGTTCAAGGGAAACATGCGCAGGCCTAGCCGGCTCCCAGTTGTCTATCCATCTTCCTCTCCTAGTAAATGTCACCTGCGTTATTTGGTTGTTGTCTCGCCTCCCTCTTGCTGTCTTCTTTGTATATATTACACACATTATGTTGTTTGTTGTATTGCTGCACCATCCGATCACACAGGTTCATGGATCCATCTTATAGGCGATGAGATTAATTGTTCCCCTTCATGCTGATCCCTATTGTTCCCGGTTCATCCCTAATCCAGCATTCCTGGTAAATATCTCTTTCTAATCGATATTGATTGATGCAGATTGTTTCTCGGCAATTCAGCTATTAGTTCATGACATATATTAGTATCCCAACCTGACCTCTTTTCTTCCGTACAACAGTATTTGTGGTTGCATATTACTCACTCCCTGCTTCACTTTCTTCTCAAATTTGACTGTAGGTTTATTTCTGGATTCAAGTACACTACAACGTTGAATAATAAGTATATTGGCACAATTTTTTTTTGGGTACATACTACTAGATTTGATTCCAAAATATACATTTTCTGCTATGCTCAATTTTTCAATCATTTAAGTTACCTTGCAACTGTCCATGAATTTTATATTTTATACTGGTTATAGTATTATGTACAAAACACTGAGTAGTAAACCGAGCTGACCAGGTCAGTGAAGCAACTACAGTATTTGATATGCAAGTTATGCAACTATAGATAATTCTTTGAGGTGACAAATTATATAAAAAAATGTCATCCTCCAGGCAGACGGTGATTTTGCACATGATGTGATTGGAGATAATTCCATCATATGCAGCACGGTGATCAATGATGTAAGTGAAAGGTATAGTCTCTGCAGGTCCCTCCCTCCTGGGATTTTCTTTTCAAATGTTAATTGATTTCATAATTTAAATTATAGTATTATTATCTCAAAATTTTTCTTGATTTTCCTTATCTTTCCTTCTTATGTATTTGAGGAGGCAAGAACCAGTAACCTTTTTTTACAGAGCGATTAGTCAATTGCTAACGTCAGTTCAGTCGATCAATCTGCAGAACTTCCCCCCGAATTTGTATGTATATTAGGTTACTCATCTATAAAACAGGGATTGGTGACTGGGCAATAAGCTTCATATCATCGATATTAACTGTATCAGGTATTTTTCAGCTTTGCTCTTCTCATTTGGAAACAAGCTTTTGGTCTATATAAACTGTGTTCAGTTAGACAATAGATAGCCTACAGTAGCTCCAGCCAAAGTATGTATATGTGACCATTCAATTGTTGTCGCTACATGAGAAAGACTTCTCTTTATCTCATTTCTTTAACCTTATTGGTTCATCATCCTTAATAAGCTCCTATTGTACGAGGACCCTAACTCATTTCTTTGAAAATGGTGTACATCTGTGCAGCTTTTATGTTAAATCCTTCCATATAGAATCCGTGCACGGACCCTTTAAACCTATGTCAATACTTAGTATCCTGCAGCAGCACGCAGGGTATCATCTAGTTGCTAAGAAATCACAAGCGTACATCCCTAACAAGAGCATTTTAAATATCTGATGTGTTGTACTGTTGTGCCTTATGGTTAATGGAAGGTCCGAATCGGTGCTAGGGAGGACAAGGAAAGAATGTGGGTGGGAAGCGAATAGTCAGTCCATTATAGCATTACTCATATGCTCCGATGACACGAGTATTCCAACAACATCCTCCAAAACATCATGTATTTATTCAATCTTGTCACAAAAAAAAAAAGCCGCACAGCATTACATAGGTGTATCCCCGTTATCTCCAAAGATGAAGATCTCTCTCATCCTCATCCGATCGAGAGCAGATAACTAACTAATTAAGCGTTGGCCGGAGGAACCGGGCAGTTGCTATTACACTCGTCGATGGTTCGGAAGGGCGAGTTGTCGTCGGGCTTCACGATGCACCTGTAGCAGGAGCTCCACGCCTCCGGGATGCAGAAGTTGGACGGGCTGCAGATGGTGATCGGGTCCATCTCCGGCTGCACGACGCCGCCACCAGCAGCTGATTTCTTCGCCGGCTCGACGACGACGACGGCGTGTGTGCGGCCACCTGGGGTTAATTATTTATTCCAAAGAAATTTACAGAGATTAATTATTCGGTGTGTGATGAACATATATATGGATCGGTAGAAAGATGAGAAAGAAATGGTGAGGTTATTGCCCTCTGACCACACTTAATTAATTACCATGTACCACGATGGCAAGGCTTCCGAGGGCGAGGAAGAGCATGAAAATGGCGCTGCACTTCATGTTGTGTGGTTTGCGAAGTTTGTGGTATGTAACTATGTACTATTGTATTTGTGTGTG]

[+] EMBL AK070799             [GAACGAGCCATACCACACGCGCGGCCGCGCCAGTTCAAGGGAAACATGCGCAGGCCTAGCCGGCTCCCAGTTGTCTATCCATCTTCCTCTCCTAGTAAATGTCACCTGCGTTATTTGGTTGTTGTCTCGCCTCCCTCTTGCTGTCTTCTTTGTATATATTACACACATTATGTTGTTTGTTGTATTGCTGCACCATCCGATCACACAGGTTCATGGATCCATCTTATAGGCGATGAGATTAATTGTTCCCCTTCATGCTGATCCCTATTGTTCCCGGTTCATCCCTAATCCAGCATTCCTGGTAAATATCTCTTTCTAATCGATATTGATTGATGCAGATTGTTTCTCGGCAATTCAGCTATTAGTTCATGACATATATTAGTATCCCAACCTGACCTCTTTTCTTCCGTACAACAGTATTTGTGGTTGCATATTACTCACTCCCTGCTTCACTTTCTTCTCAAATTTGACTGTAGGTTTATTTCTGGATTCAAGTACACTACAACGTTGAATAATAAGTATATTGGCACAATTTTTTTTTGGGTACATACTACTAGATTTGATTCCAAAATATACATTTTCTGCTATGCTCAATTTTTCAATCATTTAAGTTACCTTGCAACTGTCCATGAATTTTATATTTTATACTGGTTATAGTATTATGTACAAAACACTGAGTAGTAAACCGAGCTGACCAGGTCAGTGAAGCAACTACAGTATTTGATATGCAAGTTATGCAACTATAGATAATTCTTTGAGGTGACAAATTATATAAAAAAATGTCATCCTCCAGGCAGACGGTGATTTTGCACATGATGTGATTGGAGATAATTCCATCATATGCAGCACGGTGATCAATGATGTAAGTGAAAGGTATAGTCTCTGCAGGTCCCTCCCTCCTGGGATTTTCTTTTCAAATGTTAATTGATTTCATAATTTAAATTATAGTATTATTATCTCAAAATTTTTCTTGATTTTCCTTATCTTTCCTTCTTATGTATTTGAGGAGGCAAGAACCAGTAACCTTTTTTTACAGAGCGATTAGTCAATTGCTAACGTCAGTTCAGTCGATCAATCTGCAGAACTTCCCCCCGAATTTGTATGTATATTAGGTTACTCATCTATAAAACAGGGATTGGTGACTGGGCAATAAGCTTCATATCATCGATATTAACTGTATCAGGTATTTTTCAGCTTTGCTCTTCTCATTTGGAAACAAGCTTTTGGTCTATATAAACTGTGTTCAGTTAGACAATAGATAGCCTACAGTAGCTCCAGCCAAAGTATGTATATGTGACCATTCAATTGTTGTCGCTACATGAGAAAGACTTCTCTTTATCTCATTTCTTTAACCTTATTGGTTCATCATCCTTAATAAGCTCCTATTGTACGAGGACCCTAACTCATTTCTTTGAAAATGGTGTACATCTGTGCAGCTTTTATGTTAAATCCTTCCATATAGAATCCGTGCACGGACCCTTTAAACCTATGTCAATACTTAGTATCCTGCAGCAGCACGCAGGGTATCATCTAGTTGCTAAGAAATCACAAGCGTACATCCCTAACAAGAGCATTTTAAATATCTGATGTGTTGTACTGTTGTGCCTTATGGTTAATGGAAGGTCCGAATCGGTGCTAGGGAGGACAAGGAAAGAATGTGGGTGGGAAGCGAATAGTCAGTCCATTATAGCATTACTCATATGCTCCGATGACACGAGTATTCCAACAACATCCTCCAAAACATCATGTATTTATTCAATCTTGTCACAAAAAAAAAAAGCCGCACAGCATTACATAGGTGTATCCCCGTTATCTCCAAAGATGAAGATCTCTCTCATCCTCATCCGATCGAGAGCAGATAACTAACTAATTAAGCGTTGGCCGGAGGAACCGGGCAGTTGCTATTACACTCGTCGATGGTTCGGAAGGGCGAGTTGTCGTCGGGCTTCACGATGCACCTGTAGCAGGAGCTCCACGCCTCCGGGATGCAGAAGTTGGACGGGCTGCAGATGGTGATCGGGTCCATCTCCGGCTGCACGACGCCGCCACCAGCAGCTGATTTCTTCGCCGGCTCGACGACGACGACGGCGTGTGTGCGGCCACCTGGGGTTAATTATTTATTCCAAAGAAATTTACAGAGATTAATTATTCGGTGTGTGATGAACATATATATGGATCGGTAGAAAGATGAGAAAGAAATGGTGAGGTTATTGCCCTCTGACCACACTTAATTAATTACCATGTACCACGATGGCAAGGCTTCCGAGGGCGAGGAAGAGCATGAAAATGGCGCTGCACTTCATGTTGTGTGGTTTGCGAAGTTTGTGGTATGTAACTATGTACTATTGTATTTGTGTGTG]




>consensus_8666#0
GAACGAGCCATACCACACGCGCGGCCGCGCCAGTTCAAGGGAAACATGCGCAGGCCTAGC
CGGCTCCCAGTTGTCTATCCATCTTCCTCTCCTAGTAAATGTCACCTGCGTTATTTGGTT
GTTGTCTCGCCTCCCTCTTGCTGTCTTCTTTGTATATATTACACACATTATGTTGTTTGT
TGTATTGCTGCACCATCCGATCACACAGGTTCATGGATCCATCTTATAGGCGATGAGATT
AATTGTTCCCCTTCATGCTGATCCCTATTGTTCCCGGTTCATCCCTAATCCAGCATTCCT
GGTAAATATCTCTTTCTAATCGATATTGATTGATGCAGATTGTTTCTCGGCAATTCAGCT
ATTAGTTCATGACATATATTAGTATCCCAACCTGACCTCTTTTCTTCCGTACAACAGTAT
TTGTGGTTGCATATTACTCACTCCCTGCTTCACTTTCTTCTCAAATTTGACTGTAGGTTT
ATTTCTGGATTCAAGTACACTACAACGTTGAATAATAAGTATATTGGCACAATTTTTTTT
TGGGTACATACTACTAGATTTGATTCCAAAATATACATTTTCTGCTATGCTCAATTTTTC
AATCATTTAAGTTACCTTGCAACTGTCCATGAATTTTATATTTTATACTGGTTATAGTAT
TATGTACAAAACACTGAGTAGTAAACCGAGCTGACCAGGTCAGTGAAGCAACTACAGTAT
TTGATATGCAAGTTATGCAACTATAGATAATTCTTTGAGGTGACAAATTATATAAAAAAA
TGTCATCCTCCAGGCAGACGGTGATTTTGCACATGATGTGATTGGAGATAATTCCATCAT
ATGCAGCACGGTGATCAATGATGTAAGTGAAAGGTATAGTCTCTGCAGGTCCCTCCCTCC
TGGGATTTTCTTTTCAAATGTTAATTGATTTCATAATTTAAATTATAGTATTATTATCTC
AAAATTTTTCTTGATTTTCCTTATCTTTCCTTCTTATGTATTTGAGGAGGCAAGAACCAG
TAACCTTTTTTTACAGAGCGATTAGTCAATTGCTAACGTCAGTTCAGTCGATCAATCTGC
AGAACTTCCCCCCGAATTTGTATGTATATTAGGTTACTCATCTATAAAACAGGGATTGGT
GACTGGGCAATAAGCTTCATATCATCGATATTAACTGTATCAGGTATTTTTCAGCTTTGC
TCTTCTCATTTGGAAACAAGCTTTTGGTCTATATAAACTGTGTTCAGTTAGACAATAGAT
AGCCTACAGTAGCTCCAGCCAAAGTATGTATATGTGACCATTCAATTGTTGTCGCTACAT
GAGAAAGACTTCTCTTTATCTCATTTCTTTAACCTTATTGGTTCATCATCCTTAATAAGC
TCCTATTGTACGAGGACCCTAACTCATTTCTTTGAAAATGGTGTACATCTGTGCAGCTTT
TATGTTAAATCCTTCCATATAGAATCCGTGCACGGACCCTTTAAACCTATGTCAATACTT
AGTATCCTGCAGCAGCACGCAGGGTATCATCTAGTTGCTAAGAAATCACAAGCGTACATC
CCTAACAAGAGCATTTTAAATATCTGATGTGTTGTACTGTTGTGCCTTATGGTTAATGGA
AGGTCCGAATCGGTGCTAGGGAGGACAAGGAAAGAATGTGGGTGGGAAGCGAATAGTCAG
TCCATTATAGCATTACTCATATGCTCCGATGACACGAGTATTCCAACAACATCCTCCAAA
ACATCATGTATTTATTCAATCTTGTCACAAAAAAAAAAAGCCGCACAGCATTACATAGGT
GTATCCCCGTTATCTCCAAAGATGAAGATCTCTCTCATCCTCATCCGATCGAGAGCAGAT
AACTAACTAATTAAGCGTTGGCCGGAGGAACCGGGCAGTTGCTATTACACTCGTCGATGG
TTCGGAAGGGCGAGTTGTCGTCGGGCTTCACGATGCACCTGTAGCAGGAGCTCCACGCCT
CCGGGATGCAGAAGTTGGACGGGCTGCAGATGGTGATCGGGTCCATCTCCGGCTGCACGA
CGCCGCCACCAGCAGCTGATTTCTTCGCCGGCTCGACGACGACGACGGCGTGTGTGCGGC
CACCTGGGGTTAATTATTTATTCCAAAGAAATTTACAGAGATTAATTATTCGGTGTGTGA
TGAACATATATATGGATCGGTAGAAAGATGAGAAAGAAATGGTGAGGTTATTGCCCTCTG
ACCACACTTAATTAATTACCATGTACCACGATGGCAAGGCTTCCGAGGGCGAGGAAGAGC
ATGAAAATGGCGCTGCACTTCATGTTGTGTGGTTTGCGAAGTTTGTGGTATGTAACTATG
TACTATTGTATTTGTGTGTG

consensusID : consensus_8666#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1602
fasta sequence 
                              [CTCCCGCATCACGCTCCGCCTCCCCCACCGGCCGCGGCCACTGCAACGCTCGCTCTTCCGCCGCATCGAATCCCAACGAGCACGTCCTCCGCCTCCTGCGCCGCGCGACCTTCCAGTGCTGCAGCCCGCAGGTGGTCCCTCTCCCATGCCGCGTGACCTAAGCTCGCACCGCATCGCCTCCCTCTCTCCCACCAACAGCATCAGCGCATCGCATAAAGGGGATCGTCGGCAGTAGGGCAAGCGACGGAACGAGCCATACCACCCGCGCGGCCGCGCCAGTTCAAGGGAAACATGCGCAGGCCTAGCCGGCTCCCAGTTGTCTATCCATCTTCCTCTCCTAATAAATGTCACCTGCGTTATTTGGTTGTTGTCTCGCCTCCCTCTCCCTGTCTTCTTTGTATATATTACACACATTATGTTGTTTGTTGTATTGCTGCACCATACGATCACACAGGTTCATGGATCCATCTTCTAGGCGATGAGATTAATTGTTCCCCTTCATGCTGATCCCTATTGTTCCCGGTTCATCCCTAATACAGCATTCCAGGTAAATATCTCTTTCTAATCGATATTGATTGATGCAGATTGTTTCTCGGCAATTCAGCTATTAGTTCCCGACATATATTTTAGTATCCCAACCTGACCTCTTTTCTTCCGTACAACAGTATTTGTGGTTGCATTACTCACTCCCTGCTTCACTTTCTTCTCAGATTTGACTGTAGGTTTATTTCTGGATTCAAGTACCCTACAACGTTGAATAATAAGTATATTGGCACAATTTTTTTTTGGTACATACTACTAGATTTGATTCCAAAATATACATTTTCTGCTATGCTCAATTTTTCAATCATTTAAGTTACCTTGCAACTGTCCATGAATTTTATATTTTATACTGGTTATAGTATTATGTCCAGTGAAGCAACTACAGTATTTGATATGCAAGTTATGCGACTATAGATTATTCTTTGAAGTGACAAATTAT-AAAAAAAAAATGTCATCCTCCAGGCAGACGGTGATTTTGCACATGATGTGATTGGAGATAATTCCATCATATGCAGCATGGTGATCAATGATGTAAGTGAAAGGTATAGTCTCTGCAGGTCCCTCCCTCCTGGGATTTTCTTTACAAATGTTAATTGATTTCATAATTTAAATTATAATATTATTATCTCAAAAAATTTCTTGATTTTCCTTATCTTTCATTCTTATGTATTTGAGGAGGCAAGAACCAATAACCTTTTTTTACAGAGCGATTAGCCAATTGCTAACGTCAGTTCAGTCGATCAATCTGCAGAACTTCCCCCCGAATTTGTATGTATATTAGGTTACTCATCTATAAAACAGGGATTGGTGACTGGGCAATAAGCTTCATATCATCGATATTAGCTGTATAAGGTATTTTTCAGCTTTGCTCTTCTCATTTGGAAACAAGCGTTTGGTCTATATAAACTGTGTTCAGTTAGACAATAGATAGCCTACAGTAGCTCCAGCCAAAGTATGTATATGTGACCATTCAATTGTTGTCGCTACATGAGAAAGACTTCTCTTTATCTCATTTCTTTAAACTTATTGGTTCATCATCCTTAATAAAAAAAAAAAAAA]

[+] EMBL AK099897             [CTCCCGCATCACGCTCCGCCTCCCCCACCGGCCGCGGCCACTGCAACGCTCGCTCTTCCGCCGCATCGAATCCCAACGAGCACGTCCTCCGCCTCCTGCGCCGCGCGACCTTCCAGTGCTGCAGCCCGCAGGTGGTCCCTCTCCCATGCCGCGTGACCTAAGCTCGCACCGCATCGCCTCCCTCTCTCCCACCAACAGCATCAGCGCATCGCATAAAGGGGATCGTCGGCAGTAGGGCAAGCGACGGAACGAGCCATACCACCCGCGCGGCCGCGCCAGTTCAAGGGAAACATGCGCAGGCCTAGCCGGCTCCCAGTTGTCTATCCATCTTCCTCTCCTAATAAATGTCACCTGCGTTATTTGGTTGTTGTCTCGCCTCCCTCTCCCTGTCTTCTTTGTATATATTACACACATTATGTTGTTTGTTGTATTGCTGCACCATACGATCACACAGGTTCATGGATCCATCTTCTAGGCGATGAGATTAATTGTTCCCCTTCATGCTGATCCCTATTGTTCCCGGTTCATCCCTAATACAGCATTCCAGGTAAATATCTCTTTCTAATCGATATTGATTGATGCAGATTGTTTCTCGGCAATTCAGCTATTAGTTCCCGACATATATTTTAGTATCCCAACCTGACCTCTTTTCTTCCGTACAACAGTATTTGTGGTTGCATTACTCACTCCCTGCTTCACTTTCTTCTCAGATTTGACTGTAGGTTTATTTCTGGATTCAAGTACCCTACAACGTTGAATAATAAGTATATTGGCACAATTTTTTTTTGGTACATACTACTAGATTTGATTCCAAAATATACATTTTCTGCTATGCTCAATTTTTCAATCATTTAAGTTACCTTGCAACTGTCCATGAATTTTATATTTTATACTGGTTATAGTATTATGTCCAGTGAAGCAACTACAGTATTTGATATGCAAGTTATGCGACTATAGATTATTCTTTGAAGTGACAAATTAT AAAAAAAAAATGTCATCCTCCAGGCAGACGGTGATTTTGCACATGATGTGATTGGAGATAATTCCATCATATGCAGCATGGTGATCAATGATGTAAGTGAAAGGTATAGTCTCTGCAGGTCCCTCCCTCCTGGGATTTTCTTTACAAATGTTAATTGATTTCATAATTTAAATTATAATATTATTATCTCAAAAAATTTCTTGATTTTCCTTATCTTTCATTCTTATGTATTTGAGGAGGCAAGAACCAATAACCTTTTTTTACAGAGCGATTAGCCAATTGCTAACGTCAGTTCAGTCGATCAATCTGCAGAACTTCCCCCCGAATTTGTATGTATATTAGGTTACTCATCTATAAAACAGGGATTGGTGACTGGGCAATAAGCTTCATATCATCGATATTAGCTGTATAAGGTATTTTTCAGCTTTGCTCTTCTCATTTGGAAACAAGCGTTTGGTCTATATAAACTGTGTTCAGTTAGACAATAGATAGCCTACAGTAGCTCCAGCCAAAGTATGTATATGTGACCATTCAATTGTTGTCGCTACATGAGAAAG                                                               ]
[+] EMBL OSS13559A            [                                                                                                                                                                                                                                                                                                                                                           TCACCTGCGTTATTTGGTTNTTGTCTCGCCTCCCTCTTCCTGTCTTCTTTGTATATATTACACACATTATGTTGTTTGTTGTATTGCTGCACCATACGATCACACAGGTTCATGGATCCATCTTCTAGGCGATGAGATTAATTGTTCCCCTTCATGCTGATCCCTATTGTTCCCGGTTCATCCCTAATACAGCATTCCAGGTAAATATCTCTTTCTAATCGATATTGATTGANGCAGATTGTTTCTCGGCAATTCAGCTATTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU032690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATATGCAAG TATGCGACTATAGATTATTCTTTGAGGTGCCNAATTATNAAAANAAAAATGTCATCCTCCAGGCAGACGGTGATTTTGCACATGATGTGATTGGAGATAATTCCATCATATGCAGCATGGTGATCAATGATGTAAGTGAAAGGTATAGTCTCTGCAGGTCCCTCCCTCCTGGGATTTTCTTTACAAATGTTAATTGATTTCATAATTTAAATTATAATATTATTATCTCAAAAAATTTCTTGATTTTCCTTATCTTTCATTCTTATGTATTTGAGGAGGCAAGAACCAATAACCTTTTTTTACAGAGCGATTAGCCAATTGCTAACGTCAGTTCAGTCGATCAATCTGCAGAACTTCCCCCCGAATTTGTATGTATATTAGGTTACTCATCTATAAAACAGGGATTGGTGACTGGGCAATAAGCTTCATATCATCGATATTAGCTGTATAAGGTATTTTTCAGCTTTGCTCTTCTCATTTGGAAACAAGCGTTTGGTCTATATAAACTGTGTTCAGTTAGACAATAGATAGCCTACAGTAGCTCCAGCCAAAGTATGTATATGTGACCATTCAATTGTTGTCGCTACATGAGAAAGACTTCTCTTTATCTCATTTCTTTAAACTTATTGGTTCATCATCCTTAATAAAAAAAAAAAAAA]




>consensus_8666#1
CTCCCGCATCACGCTCCGCCTCCCCCACCGGCCGCGGCCACTGCAACGCTCGCTCTTCCG
CCGCATCGAATCCCAACGAGCACGTCCTCCGCCTCCTGCGCCGCGCGACCTTCCAGTGCT
GCAGCCCGCAGGTGGTCCCTCTCCCATGCCGCGTGACCTAAGCTCGCACCGCATCGCCTC
CCTCTCTCCCACCAACAGCATCAGCGCATCGCATAAAGGGGATCGTCGGCAGTAGGGCAA
GCGACGGAACGAGCCATACCACCCGCGCGGCCGCGCCAGTTCAAGGGAAACATGCGCAGG
CCTAGCCGGCTCCCAGTTGTCTATCCATCTTCCTCTCCTAATAAATGTCACCTGCGTTAT
TTGGTTGTTGTCTCGCCTCCCTCTCCCTGTCTTCTTTGTATATATTACACACATTATGTT
GTTTGTTGTATTGCTGCACCATACGATCACACAGGTTCATGGATCCATCTTCTAGGCGAT
GAGATTAATTGTTCCCCTTCATGCTGATCCCTATTGTTCCCGGTTCATCCCTAATACAGC
ATTCCAGGTAAATATCTCTTTCTAATCGATATTGATTGATGCAGATTGTTTCTCGGCAAT
TCAGCTATTAGTTCCCGACATATATTTTAGTATCCCAACCTGACCTCTTTTCTTCCGTAC
AACAGTATTTGTGGTTGCATTACTCACTCCCTGCTTCACTTTCTTCTCAGATTTGACTGT
AGGTTTATTTCTGGATTCAAGTACCCTACAACGTTGAATAATAAGTATATTGGCACAATT
TTTTTTTGGTACATACTACTAGATTTGATTCCAAAATATACATTTTCTGCTATGCTCAAT
TTTTCAATCATTTAAGTTACCTTGCAACTGTCCATGAATTTTATATTTTATACTGGTTAT
AGTATTATGTCCAGTGAAGCAACTACAGTATTTGATATGCAAGTTATGCGACTATAGATT
ATTCTTTGAAGTGACAAATTATAAAAAAAAAATGTCATCCTCCAGGCAGACGGTGATTTT
GCACATGATGTGATTGGAGATAATTCCATCATATGCAGCATGGTGATCAATGATGTAAGT
GAAAGGTATAGTCTCTGCAGGTCCCTCCCTCCTGGGATTTTCTTTACAAATGTTAATTGA
TTTCATAATTTAAATTATAATATTATTATCTCAAAAAATTTCTTGATTTTCCTTATCTTT
CATTCTTATGTATTTGAGGAGGCAAGAACCAATAACCTTTTTTTACAGAGCGATTAGCCA
ATTGCTAACGTCAGTTCAGTCGATCAATCTGCAGAACTTCCCCCCGAATTTGTATGTATA
TTAGGTTACTCATCTATAAAACAGGGATTGGTGACTGGGCAATAAGCTTCATATCATCGA
TATTAGCTGTATAAGGTATTTTTCAGCTTTGCTCTTCTCATTTGGAAACAAGCGTTTGGT
CTATATAAACTGTGTTCAGTTAGACAATAGATAGCCTACAGTAGCTCCAGCCAAAGTATG
TATATGTGACCATTCAATTGTTGTCGCTACATGAGAAAGACTTCTCTTTATCTCATTTCT
TTAAACTTATTGGTTCATCATCCTTAATAAAAAAAAAAAAAA

consensusID : consensus_8666#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 459
fasta sequence 
                              [TTTTTCCTCCAAAAGCAACAGTGTTTCTTTATTCAATCTTTTCTTCTAAAAATAGCCGTATAGGATCACATGGGTGCACCCCCGTTATCGCTAAAGATCAAGAAGACACCATCCTCACCCAACAGAACACGTAACTAATTAAGCGTTGGCCGGAGGAACCGGGCAGTTGCTATGACTCGTCGATGGTTCGGAAGGGCGGGTTGTCGTCGGGCTTCACGATGCACCTGTAGCAGGAGCTCCACGCCTCCGGGATGCAGAAGTTGGACGGGCTGCAGATGGTGATCGGGTCGAACTGCGGCTGCGCGACGCCAGCAGCAGCCGATTTCTTCGCCGGCTCGATGATGGCGTGTGTCCTGCCACCGTGCACCGCGATGGCGAGGATTCCGAGGGCGAGGAACAGCATGAAAATGGCGCTGAACTTCATGTTGCTGCTCTGCAAAAGTATGTGTGGTGTGTATG]

[-] EMBL BI799443             [TTTTTCCTCCAAAAGCAACAGTGTTTCTTTATTCAATCTTTTCTTCTAAAAATAGCCGTATAGGATCACATGGGTGCACCCCCGTTATCGCTAAAGATCAAGAAGACACCATCCTCACCCAACAGAACACGTAACTAATTAAGCGTTGGCCGGAGGAACCGGGCAGTTGCTATGACTCGTCGATGGTTCGGAAGGGCGGGTTGTCGTCGGGCTTCACGATGCACCTGTAGCAGGAGCTCCACGCCTCCGGGATGCAGAAGTTGGACGGGCTGCAGATGGTGATCGGGTCGAACTGCGGCTGCGCGACGCCAGCAGCAGCCGATTTCTTCGCCGGCTCGATGATGGCGTGTGTCCTGCCACCGTGCACCGCGATGGCGAGGATTCCGAGGGCGAGGAACAGCATGAAAATGGCGCTGAACTTCATGTTGCTGCTCTGCAAAAGTATGTGTGGTGTGTATG]




>consensus_8666#2
TTTTTCCTCCAAAAGCAACAGTGTTTCTTTATTCAATCTTTTCTTCTAAAAATAGCCGTA
TAGGATCACATGGGTGCACCCCCGTTATCGCTAAAGATCAAGAAGACACCATCCTCACCC
AACAGAACACGTAACTAATTAAGCGTTGGCCGGAGGAACCGGGCAGTTGCTATGACTCGT
CGATGGTTCGGAAGGGCGGGTTGTCGTCGGGCTTCACGATGCACCTGTAGCAGGAGCTCC
ACGCCTCCGGGATGCAGAAGTTGGACGGGCTGCAGATGGTGATCGGGTCGAACTGCGGCT
GCGCGACGCCAGCAGCAGCCGATTTCTTCGCCGGCTCGATGATGGCGTGTGTCCTGCCAC
CGTGCACCGCGATGGCGAGGATTCCGAGGGCGAGGAACAGCATGAAAATGGCGCTGAACT
TCATGTTGCTGCTCTGCAAAAGTATGTGTGGTGTGTATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8666#0      ------------------------------------------------------------
consensus_8666#1      CTCCCGCATCACGCTCCGCCTCCCCCACCGGCCGCGGCCACTGCAACGCTCGCTCTTCCG 60
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      ------------------------------------------------------------
consensus_8666#1      CCGCATCGAATCCCAACGAGCACGTCCTCCGCCTCCTGCGCCGCGCGACCTTCCAGTGCT 120
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      ------------------------------------------------------------
consensus_8666#1      GCAGCCCGCAGGTGGTCCCTCTCCCATGCCGCGTGACCTAAGCTCGCACCGCATCGCCTC 180
consensus_8666#2      ----------------------TTTTTCCTCCAAAAGCAACAGTGTTTCTTTATT-CAAT 37
                                                                                  

consensus_8666#0      ------------------------------------------------------------
consensus_8666#1      CCTCTCTCCCACCAACAGCATCAGCGCATCGCATAAAGGGGATCGTCGGCAGTAGGGCAA 240
consensus_8666#2      CTTTTCTTCTAAAAATAGCCGTATAGGATCACATGG-GTGCACCCCCGTTATCGCTAAAG 96
                                                                                  

consensus_8666#0      ------GAACGAGCCATACCACACGCGCGGCCGCGCCAGTTCAAGGGAAACATGCGCAGG 54
consensus_8666#1      GCGACGGAACGAGCCATACCACCCGCGCGGCCGCGCCAGTTCAAGGGAAACATGCGCAGG 300
consensus_8666#2      ATCAAGAAGACACCATCCTCACCCAACAGAACACGTAACT---AATTAAGCGTTGGCCGG 153
                             *   * *     *** *    *  * **  * *   *   ** * *  ** **

consensus_8666#0      CCTAGCCGGCTCCCAGTTGTCTATCCATCTTCCTCTCCTAGTAAATGTCACCTGCGTTAT 114
consensus_8666#1      CCTAGCCGGCTCCCAGTTGTCTATCCATCTTCCTCTCCTAATAAATGTCACCTGCGTTAT 360
consensus_8666#2      AGGAACCGGG---CAGTTG-CTATGACTCGTC-------GATGGTTCGGAAGGGCG---- 198
                         * ****    ****** ****   ** **         *   *   *   ***    

consensus_8666#0      TTGGTTGTTGTCTCGCCTCCCTCTTGCTGTCTTCTTTGTATATATTACACACATTATGTT 174
consensus_8666#1      TTGGTTGTTGTCTCGCCTCCCTCTCCCTGTCTTCTTTGTATATATTACACACATTATGTT 420
consensus_8666#2      --GGTTGTCGTCGGGCTTCACGATGCACCTGTAGCAGGAGCTCCACGCCTCCGGGATGCA 256
                        ****** ***  ** ** *  *     * *     *         *   *   ***  

consensus_8666#0      GTTTGTTGTATTGCTGCACCATCCGATCACACAGGTTCATGGATCCATCTTATAGGCGAT 234
consensus_8666#1      GTTTGTTGTATTGCTGCACCATACGATCACACAGGTTCATGGATCCATCTTCTAGGCGAT 480
consensus_8666#2      GAAGTTGGACGGGCTGCAGATGGTGATCGGGTCGAACTGCGGCTGCGCGACGCCAGCAGC 316
                      *    * *    ******      ****     *      ** * *         **   

consensus_8666#0      GA--GATTAATTGTTCCCCTTCATGCTGATCCCTATTGTTCC-CGGTTCATCCCTAATCC 291
consensus_8666#1      GA--GATTAATTGTTCCCCTTCATGCTGATCCCTATTGTTCC-CGGTTCATCCCTAATAC 537
consensus_8666#2      AGCCGATTTCTTCGCCGGCTCGATGATGGCGTGTGTCCTGCCACCGTGCACCGCGATGGC 376
                          ****  **   *  **  *** **     * *  * ** * ** ** * * *   *

consensus_8666#0      -AGCATTCCT--GGTAAATATCTCTTTCTAATCGATATTGATTGATGCAGATTGTTTCTC 348
consensus_8666#1      -AGCATTCCA--GGTAAATATCTCTTTCTAATCGATATTGATTGATGCAGATTGTTTCTC 594
consensus_8666#2      GAGGATTCCGAGGGCGAGGAACAGCATGAAAATGGCGCTGAAC--TTCATGTTGCTGCTC 434
                       ** *****   **  *  * *    *  **  *    ***    * **  *** * ***

consensus_8666#0      GGCAATTCAGCTATTAGTTCATGACATATATT--AGTATCCCAACCTGACCTCTTTTCTT 406
consensus_8666#1      GGCAATTCAGCTATTAGTTCCCGACATATATTTTAGTATCCCAACCTGACCTCTTTTCTT 654
consensus_8666#2      TGCAA---AAGTATGTGT----GGTGTGTATG---------------------------- 459
                       ****   *  ***  **    *   * ***                             

consensus_8666#0      CCGTACAACAGTATTTGTGGTTGCATATTACTCACTCCCTGCTTCACTTTCTTCTCAAAT 466
consensus_8666#1      CCGTACAACAGTATTTGTGGTTGCAT--TACTCACTCCCTGCTTCACTTTCTTCTCAGAT 712
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      TTGACTGTAGGTTTATTTCTGGATTCAAGTACACTACAACGTTGAATAATAAGTATATTG 526
consensus_8666#1      TTGACTGTAGGTTTATTTCTGGATTCAAGTACCCTACAACGTTGAATAATAAGTATATTG 772
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      GCACAATTTTTTTTTGGGTACATACTACTAGATTTGATTCCAAAATATACATTTTCTGCT 586
consensus_8666#1      GCACAATTTTTTTTTGG-TACATACTACTAGATTTGATTCCAAAATATACATTTTCTGCT 831
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      ATGCTCAATTTTTCAATCATTTAAGTTACCTTGCAACTGTCCATGAATTTTATATTTTAT 646
consensus_8666#1      ATGCTCAATTTTTCAATCATTTAAGTTACCTTGCAACTGTCCATGAATTTTATATTTTAT 891
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      ACTGGTTATAGTATTATGTACAAAACACTGAGTAGTAAACCGAGCTGACCAGGTCAGTGA 706
consensus_8666#1      ACTGGTTATAGTATTATGT----------------------------------CCAGTGA 917
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      AGCAACTACAGTATTTGATATGCAAGTTATGCAACTATAGATAATTCTTTGAGGTGACAA 766
consensus_8666#1      AGCAACTACAGTATTTGATATGCAAGTTATGCGACTATAGATTATTCTTTGAAGTGACAA 977
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      ATTATATAAAAAAA-TGTCATCCTCCAGGCAGACGGTGATTTTGCACATGATGTGATTGG 825
consensus_8666#1      ATTATAAAAAAAAAATGTCATCCTCCAGGCAGACGGTGATTTTGCACATGATGTGATTGG 1037
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      AGATAATTCCATCATATGCAGCACGGTGATCAATGATGTAAGTGAAAGGTATAGTCTCTG 885
consensus_8666#1      AGATAATTCCATCATATGCAGCATGGTGATCAATGATGTAAGTGAAAGGTATAGTCTCTG 1097
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      CAGGTCCCTCCCTCCTGGGATTTTCTTTTCAAATGTTAATTGATTTCATAATTTAAATTA 945
consensus_8666#1      CAGGTCCCTCCCTCCTGGGATTTTCTTTACAAATGTTAATTGATTTCATAATTTAAATTA 1157
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      TAGTATTATTATCTCAAAATTTTTCTTGATTTTCCTTATCTTTCCTTCTTATGTATTTGA 1005
consensus_8666#1      TAATATTATTATCTCAAAAAATTTCTTGATTTTCCTTATCTTTCATTCTTATGTATTTGA 1217
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      GGAGGCAAGAACCAGTAACCTTTTTTTACAGAGCGATTAGTCAATTGCTAACGTCAGTTC 1065
consensus_8666#1      GGAGGCAAGAACCAATAACCTTTTTTTACAGAGCGATTAGCCAATTGCTAACGTCAGTTC 1277
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      AGTCGATCAATCTGCAGAACTTCCCCCCGAATTTGTATGTATATTAGGTTACTCATCTAT 1125
consensus_8666#1      AGTCGATCAATCTGCAGAACTTCCCCCCGAATTTGTATGTATATTAGGTTACTCATCTAT 1337
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      AAAACAGGGATTGGTGACTGGGCAATAAGCTTCATATCATCGATATTAACTGTATCAGGT 1185
consensus_8666#1      AAAACAGGGATTGGTGACTGGGCAATAAGCTTCATATCATCGATATTAGCTGTATAAGGT 1397
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      ATTTTTCAGCTTTGCTCTTCTCATTTGGAAACAAGCTTTTGGTCTATATAAACTGTGTTC 1245
consensus_8666#1      ATTTTTCAGCTTTGCTCTTCTCATTTGGAAACAAGCGTTTGGTCTATATAAACTGTGTTC 1457
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      AGTTAGACAATAGATAGCCTACAGTAGCTCCAGCCAAAGTATGTATATGTGACCATTCAA 1305
consensus_8666#1      AGTTAGACAATAGATAGCCTACAGTAGCTCCAGCCAAAGTATGTATATGTGACCATTCAA 1517
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      TTGTTGTCGCTACATGAGAAAGACTTCTCTTTATCTCATTTCTTTAACCTTATTGGTTCA 1365
consensus_8666#1      TTGTTGTCGCTACATGAGAAAGACTTCTCTTTATCTCATTTCTTTAAACTTATTGGTTCA 1577
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      TCATCCTTAATAAGCTCCTATTGTACGAGGACCCTAACTCATTTCTTTGAAAATGGTGTA 1425
consensus_8666#1      TCATCCTTAATAAAAAAAAAAAAAA----------------------------------- 1602
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      CATCTGTGCAGCTTTTATGTTAAATCCTTCCATATAGAATCCGTGCACGGACCCTTTAAA 1485
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      CCTATGTCAATACTTAGTATCCTGCAGCAGCACGCAGGGTATCATCTAGTTGCTAAGAAA 1545
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      TCACAAGCGTACATCCCTAACAAGAGCATTTTAAATATCTGATGTGTTGTACTGTTGTGC 1605
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      CTTATGGTTAATGGAAGGTCCGAATCGGTGCTAGGGAGGACAAGGAAAGAATGTGGGTGG 1665
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      GAAGCGAATAGTCAGTCCATTATAGCATTACTCATATGCTCCGATGACACGAGTATTCCA 1725
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      ACAACATCCTCCAAAACATCATGTATTTATTCAATCTTGTCACAAAAAAAAAAAGCCGCA 1785
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      CAGCATTACATAGGTGTATCCCCGTTATCTCCAAAGATGAAGATCTCTCTCATCCTCATC 1845
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      CGATCGAGAGCAGATAACTAACTAATTAAGCGTTGGCCGGAGGAACCGGGCAGTTGCTAT 1905
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      TACACTCGTCGATGGTTCGGAAGGGCGAGTTGTCGTCGGGCTTCACGATGCACCTGTAGC 1965
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      AGGAGCTCCACGCCTCCGGGATGCAGAAGTTGGACGGGCTGCAGATGGTGATCGGGTCCA 2025
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      TCTCCGGCTGCACGACGCCGCCACCAGCAGCTGATTTCTTCGCCGGCTCGACGACGACGA 2085
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      CGGCGTGTGTGCGGCCACCTGGGGTTAATTATTTATTCCAAAGAAATTTACAGAGATTAA 2145
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      TTATTCGGTGTGTGATGAACATATATATGGATCGGTAGAAAGATGAGAAAGAAATGGTGA 2205
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      GGTTATTGCCCTCTGACCACACTTAATTAATTACCATGTACCACGATGGCAAGGCTTCCG 2265
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      AGGGCGAGGAAGAGCATGAAAATGGCGCTGCACTTCATGTTGTGTGGTTTGCGAAGTTTG 2325
consensus_8666#1      ------------------------------------------------------------
consensus_8666#2      ------------------------------------------------------------
                                                                                  

consensus_8666#0      TGGTATGTAACTATGTACTATTGTATTTGTGTGTG 2360
consensus_8666#1      -----------------------------------
consensus_8666#2      -----------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)