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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8699#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3176 fasta sequence
[TCTCTCCGCCGCCGCCACCGCCGATCCACCACCCGACGAGTCGCCCCCTCCTCCTCCGCATCCTCCACCGCCACCGACGCCGCCCTCCAACTCGAAGCTCTTCGTCGCCGGGTTGTCGTGGTCCGCGGACGAGCGGTCGCTGACGGACGCCTTCTCCTCCTTCGGCACCGTCACCGAAGATGGTGTGCGCGGTAGGTGTTCGATGAAACGGCTCGGAGGAGGAAGTGGGTGTTCCGCTCGCGCGCGACCTCGCCAAATGTTCGATGAAATGCCTGTTAGGGATTTGGTCGCATGCTCGGCTGCAATCTACCGGCATGCGAAGAGCGGGTTGTTTGGCGAGGCTGTCAGGCTGTTTGCTGGTATGATGAGGGTGGGGGTGAGCCCCAACTCGTTCACATTGGTTGGTGCTTTAATAGCAGCTGCTGGGATGGGCAACTTGGTGCTTGCTGAGTGCATCCATGGGTGGGCTATGAAGAGCCTGTTGGAATCCAATCCTTTTGTTCGGACCGCATTGCTTGATTCCTATGCGAAATGTGGACGTCCTACGAAGGCCTGGGCATTGTTTGGTGAAATGAGGGATCCTGGTATAGTTACTTGGAATGCATTGATTTCTGGTCTAGTGCACAACGATCTGTTTGAGGAAGCATTGCTGGTTTTCAAGAGGTTGCTGTTTTCATTTGGACCAGTTCATAATGTTGTGACTATGATTAGCATTGCTCAGGCTTCTGCTGGTTGTGGTGACCTTGGATTGTGTGAGAGTGCACATGCTTATTCAGTCAAGATTGGGCTTGATTCAGATGTCTCAGTGACAAACTCAATCTTGGGTATGTACTTGAGCTTTGGTAGTCTTGCGATTGGAAGAGAGATTTTCAAAAAGATCGCTGTTAATGATGTTGTTTCTTGGACGATGATGATGGGTTTCCTTCTTGAGGAAGCCCAGGCTATTGAAGTTATACATATGTTTGTTCAGATGAGGTTGAGTGGCATAGTGCCTGATAGGGTAGCATTGGTTACAGTGGCGCAAGCTTGTGCACATCTGGGTGATGGAAGGATAGGAAAGTTGGTTCATAACGAGATTGTAATCTGTGGGTTCAGTGGTGAGCTTCCTGCAGTTAACTCGTTAATCACAATGTATTCTAAATGTGAGGATTTAAGTTCTGCAAGACTGTTGTTTGATGGTACAATGGAGAAAAGCTTGGTTTCATGGACGGCAATGGTGTCAGCGTATATAGAAAATGGATATGCCCTAGAAGGGATGTATCTCTTTGCGAAGATGAGGCATGAAGGTTCCTTTATGATTGATTCTGTGACACTGGTCACCTTATTGCTTGCTTGCTATGAGGTTGCTAAGTTTGAACTATGTATTCAACTTCATGCATATTGTTACAAATCGGGTTTGTGTCTGTACAAACCTGTTCTTAATACCCTCATTGCAGTTTATGGTAAGTGTGGATATGCGACTTTAGCGCATAAAGTGTTTGATGAGATGATTTCTCGGAATGCTGTCTCATGGAATACTATGATTTTATCCTATGGTGTAAATGGCCAAGGAGAGAAAGCAGTATCACTTTTCAATGAAATGGAGAAATCTAGCGAGGATCAAGACAGTGTGACTTATTTGAACACATTGCTAGCATGTAGCCACTCTGGACTGGTGGATGATGGGATGCTCGTCTTTAGAAGAATGGTTAATGACAAGGGAATAATTCCATGCCCAGAGCATGTCGGATGCATAGTTGATATGTTGGCAAGAGCTGGCCGCTTGGAGGAAGCAGCAGGAGTGGCTAGCTTGACTCACAATAAATTAGGAGCAAATGCTTGGAAGGCTTTGATGGGAGGAGGGCATTTGCATGGTGACATGAAATTTACTAAAGTTGCTGCAAAGAAGGTGCTCACCACGGAATCATTTGATTATGGGCATGTTGTGTTACTTTCTAATGCTTATGCATCATCTGGCAAATATAGAGCTGCTGAATCTGTCAGATCCTGTTATGCAAAGCGAATTACAAGGAAAACTTTAGGGCTTAGTTCCATTGAGATAGTGCCGTACAGCAGAAGATAGTAGAACAACTCTTACCTAGGGAAGAGAGAAGATACATCAAACAATTAGTATTCACTGTCTGTCTGTCTCAAGCTATTGGAATCTATCTCAGGCATAAGTTGAGTATTCACTTTCAGGTTGCCAAGTCTCCTGTGGAAAAAGTAAAGCATCAAGCATGATTTTCAAATGCAAGTTGATGAAATAGATGATTGCCTTGGACCTTTTTCTTTAAAAGAAAAATATGCCTTGGTCTATGGAACATGACCAACGATATCACATCTCAACTCACTATTGCTCCAGGAATCTCTAACACGTGAATATGGATTCTAATGTGAGAATAATGTATGACAAAAACTCTGGAAGGTCAAGAGGTTTTGGGTTTGTGCACTTCTCAAACGAGTATGAAGCTAAGTGCGCCAAGGATGCTATGGATGGAAAGGTAATGCTAGGACGACCATTGCGGATAAGTTTTGCTCTTGACAAGGTCCGTGGTGCTCCAGTTGTTGTTCCACGACTTTCCACGGTGAAATGAAACTACTAAGAGAGAT-GGTTTGGTCA-TCATATGGACATACCAGGAGGC-TGGCGAAGCATCCATAGGCTAGTGTTTTGAACCTTCCCAAGTAGACGTCGGAGATGAAGGCGCCTAGCAATGGCGCAAAGTTAAGCGTACCGAAGAATATGTTGGTAATATTAGCTGCCTCAATTTGCCCAATGTTGAAGCGCTTCACAAGATAGACCGTCAAATTTGCTACCACTCCAATTGTCGCAACCTTTTCAAATGTCTCAGTTGCTACATAGATACAATCAGAAAAGGGCATCCA-TTCAGTACA-TTAT-AATGAGCATTTTGA--TTTGAT-CCGCTTG-AAGTACAACATAATTCATTCGTGAATCCCTTTTTGCTTTGATTTGAGGCAGGGTGTGTCCTGTGCAGGGATCACCGGGTTAGAGCACCCATGTTGTCATGTCTAAATTTAGACAAAGAAGCCAAGCCAAGCCAGACCAAATCAACATATACTTGGTCTAGGCTCAGAGTCTGAAAATACTCTTATATTGAATGGATATTAGTATATGATTTACGGTAGTCATGTAGAAGTATTAATGAGATGATTCACGAATACGAGTGATTAAAAGAGTCTTC]
[+] EMBL AK099881 [TCTCTCCGCCGCCGCCACCGCCGATCCACCACCCGACGAGTCGCCCCCTCCTCCTCCGCATCCTCCACCGCCACCGACGCCGCCCTCCAACTCGAAGCTCTTCGTCGCCGGGTTGTCGTGGTCCGCGGACGAGCGGTCGCTGACGGACGCCTTCTCCTCCTTCGGCACCGTCACCGAAGATGGTGTGCGCGGTAGGTGTTCGATGAAACGGCTCGGAGGAGGAAGTGGGTGTTCCGCTCGCGCGCGACCTCGCCAAATGTTCGATGAAATGCCTGTTAGGGATTTGGTCGCATGCTCGGCTGCAATCTACCGGCATGCGAAGAGCGGGTTGTTTGGCGAGGCTGTCAGGCTGTTTGCTGGTATGATGAGGGTGGGGGTGAGCCCCAACTCGTTCACATTGGTTGGTGCTTTAATAGCAGCTGCTGGGATGGGCAACTTGGTGCTTGCTGAGTGCATCCATGGGTGGGCTATGAAGAGCCTGTTGGAATCCAATCCTTTTGTTCGGACCGCATTGCTTGATTCCTATGCGAAATGTGGACGTCCTACGAAGGCCTGGGCATTGTTTGGTGAAATGAGGGATCCTGGTATAGTTACTTGGAATGCATTGATTTCTGGTCTAGTGCACAACGATCTGTTTGAGGAAGCATTGCTGGTTTTCAAGAGGTTGCTGTTTTCATTTGGACCAGTTCATAATGTTGTGACTATGATTAGCATTGCTCAGGCTTCTGCTGGTTGTGGTGACCTTGGATTGTGTGAGAGTGCACATGCTTATTCAGTCAAGATTGGGCTTGATTCAGATGTCTCAGTGACAAACTCAATCTTGGGTATGTACTTGAGCTTTGGTAGTCTTGCGATTGGAAGAGAGATTTTCAAAAAGATCGCTGTTAATGATGTTGTTTCTTGGACGATGATGATGGGTTTCCTTCTTGAGGAAGCCCAGGCTATTGAAGTTATACATATGTTTGTTCAGATGAGGTTGAGTGGCATAGTGCCTGATAGGGTAGCATTGGTTACAGTGGCGCAAGCTTGTGCACATCTGGGTGATGGAAGGATAGGAAAGTTGGTTCATAACGAGATTGTAATCTGTGGGTTCAGTGGTGAGCTTCCTGCAGTTAACTCGTTAATCACAATGTATTCTAAATGTGAGGATTTAAGTTCTGCAAGACTGTTGTTTGATGGTACAATGGAGAAAAGCTTGGTTTCATGGACGGCAATGGTGTCAGCGTATATAGAAAATGGATATGCCCTAGAAGGGATGTATCTCTTTGCGAAGATGAGGCATGAAGGTTCCTTTATGATTGATTCTGTGACACTGGTCACCTTATTGCTTGCTTGCTATGAGGTTGCTAAGTTTGAACTATGTATTCAACTTCATGCATATTGTTACAAATCGGGTTTGTGTCTGTACAAACCTGTTCTTAATACCCTCATTGCAGTTTATGGTAAGTGTGGATATGCGACTTTAGCGCATAAAGTGTTTGATGAGATGATTTCTCGGAATGCTGTCTCATGGAATACTATGATTTTATCCTATGGTGTAAATGGCCAAGGAGAGAAAGCAGTATCACTTTTCAATGAAATGGAGAAATCTAGCGAGGATCAAGACAGTGTGACTTATTTGAACACATTGCTAGCATGTAGCCACTCTGGACTGGTGGATGATGGGATGCTCGTCTTTAGAAGAATGGTTAATGACAAGGGAATAATTCCATGCCCAGAGCATGTCGGATGCATAGTTGATATGTTGGCAAGAGCTGGCCGCTTGGAGGAAGCAGCAGGAGTGGCTAGCTTGACTCACAATAAATTAGGAGCAAATGCTTGGAAGGCTTTGATGGGAGGAGGGCATTTGCATGGTGACATGAAATTTACTAAAGTTGCTGCAAAGAAGGTGCTCACCACGGAATCATTTGATTATGGGCATGTTGTGTTACTTTCTAATGCTTATGCATCATCTGGCAAATATAGAGCTGCTGAATCTGTCAGATCCTGTTATGCAAAGCGAATTACAAGGAAAACTTTAGGGCTTAGTTCCATTGAGATAGTGCCGTACAGCAGAAGATAGTAGAACAACTCTTACCTAGGGAAGAGAGAAGATACATCAAACAATTAGTATTCACTGTCTGTCTGTCTCAAGCTATTGGAATCTATCTCAGGCATAAGTTGAGTATTCACTTTCAGGTTGCCAAGTCTCCTGTGGAAAAAGTAAAGCATCAAGCATGATTTTCAAATGCAAGTTGATGAAATAGATGATTGCCTTGGACCTTTTTCTTTAAAAGAAAAATATGCCTTGGTCTATGGAACATGACCAACGATATCACATCTCAACTCACTATTGCTCCAGGAATCTCTAACACGTGAATATGGATTCTAATGTGAGAATAATGTATGACAAAAACTCTGGAAGGTCAAGAGGTTTTGGGTTTGTGCACTTCTCAAACGAGTATGAAGCTAAGTGCGCCAAGGATGCTATGGATGGAAAGGTAATGCTAGGACGACCATTGCGGATAAGT ]
[+] EMBL AK064467 [ AGAAATCTAGCGAGGATCAAGACAGTGTGACTTATTTGAACACATTGCTAGCATGTAGCCACTCTGGATTGGTGGATGATGGGATGCTCGTCTTTAGAAGAATGGTTAATGACAAGGGAATAATTCCATGCCCAGAGCATGTCGGATGCATAGTTGATATGTTGGCAAGAGCTGGCCGCTTGGAGGAAGCAGCAGGAGTGGCTAGCTTGACTCACAATAAATTAGGAGCAAATGCTTGGAAGGCTTTGATGGGAGGAGGGCATTTGCATGGTGACATGAAATTTACTAAAGTTGCTGCAAAGAAGGTGCTCACCACGGAATCATTTGATTATGGGCATGTTGTGTTACTTTCTAATGCTTATGCATCATCTGGCAAATATAGAGCTGCTGAATCTGTCAGATCCTGTTATGCAAAGCGAATTACAAGGAAAACTTTAGGGCTTAGTTCCATTGAGATAGTGCCGTACAGCAGAAGATAGTAGAACAACTCTTACCTAGGGAAGAGAGAAGATACATCAAACAATTAGTATTCACTGTCTGTCTGTCTCAAGCTATTGGAATCTATCTCAGGCATAAGTTGAGTATTCACTTTCAGGTTGCCAAGTCTCCTGTGGAAAAAGTAAAGCATCAAGCATGATTTTCAAATGCAAGTTGATGAAATAGATGATTGCCTTGGACCTTTTTCTTTAAAAGAAAAATATGCCTTGGTCTATGGAACATGACCAACGATATCACATCTCAACTCACTATTGCTCCAGGAATCTCTAACACGTGAATATGGATTCTAATGTGAGAATAATGTATGACAAAAACTCTGGAAGGTCAAGAGGTTTTGGGTTTGTGCACTTCTCAAACGAGTATGAAGCTAAGTGCGCCAAGGATGCTATGGATGGAAAGGTAATGCTAGGACGACCATTGCGGATAAGTTTTGCTCTTGACAAGGTCCGTGGTGCTCCAGTTGTTGTTCCACGACTTTCCACGGTGAAATGAAACTACTAAGAGAGAT GGTTTGGTCA TCATATGGACATACCAGGAGGC TGGCGAAGCATCCATAGGCTAGTGTTTTGAACCTTCCCAAGTAGACGTCGGAGATGAAGGCGCCTAGCAATGGCGCAAAGTTAAGCGTACCGAAGAATATGTTGGTAATATTAGCTGCCTCAATTTGCCCAATGTTGAAGCGCTTCACAAGATAGACCGTCAAATTTGCTACCACTCCAATTGTCGCAACCTTTTCAAATGTCTCAGTTGCTACATAGATACAATCAGAAAAGGGCATCCA TTCAGTACA TTAT AATGAGCATTTTGA TTTGAT CCGCTTG AAGTACAACATAATTCATTCGTGAATCCCTTTTTGCTTTGATTTGAGGCAGGGTGTGTCCTGTGCAGGGATCACCGGGTTAGAGCACCCATGTTGTCATGTCTAAATTTAGACAAAGAAGCCAAGCCAAGCCAGACCAAATCAACATATACTTGGTCTAGGCTCAGAGTCTGAAAATACTCTTATATTGAATGGATATTAGTATATGATTTACGGTAGTCATGTAGAAGTATTAATGAGATGATTCACGAATACGAGTGATTAAAAGAGTCTTC]
[+] EMBL OSS1187A [ CTAAGAGAGAT GGTTTGGTCA TCATATGGACATACCAGGAGGC TGGCGAAG ATCCATAGGCTAGTGTTTTGAACCTTCCCAAGTAGACGTCGGAGATGAAGGCGCCTAGCAATGGCGCAAAGTTAAGCGTACCGAAGAATATGTTGGTAATATTAGCTGCCTCAATTTGCCCAATGTTGAAGCGCTTCACAAGATAGACCGTCAAATTTGCTACCACTCCAATTGTCGCAACCTTTTCAAATGTCTCAGTTGCTACATAGATACAATCAGAAAAGGGCATCCATTTCAGTACATTTATAAATGAGCATTTTGAATTTTGATCCCGCTTGAAAGTA ]
[+] EMBL AU101931 [ actTAAGAGAGATCGGNTTGGTCATTCATATGGACATACCAGGAGGCTTGGCGAAGCATCCATAGGCTAGTGTTCTGAACCTTCCCAAGTAGACGTCGGAGATGAAGGCGCCTAGCAATGGCGCAAAGTTAAGCGTACCGAAGAATATGTTGGTAATATTAGCTGCCTCAATTTGCCCAATGTTGAAGCGCTTCACAAGATAGACCGTCAAATTTGCTACCACTCCAATTGTCGCAACCTTTTCAAATGTCTCAGTTGCTACATAGATACAATCAGAAAAGGGCATCCA TTCAGTACA TTAT AATGAGCATTTTGA TTTGAT CCGCTTG AAGTACAAa ]
consensusID : consensus_8699#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2295 fasta sequence
[GGTGTATGACCTGTGCTTACTTGTCGCATAACCATTATGGACTTGTTTAAGTTTCATAAGCTATCACTCACACTCCATTACTTCGAATACAACAGGACAGGCCATTTAAACTCTTTATTCATGTTTGCTAGATAACATGTCACCCCCTTGCTATGGTACACTTGTTTTTGTCACATCCATAAGATGACACAGAGGTCTGTTTGATGTTACAAACATTAGAGCCTCTTCTAAAGTGAATTCGAAATTGGAATTTGAATATGTCACCATGTCCAAAAGTATATTCCTTGTGCCAGATCAATTAGACTCGCAGTTGCACTATTCATTTGCTAGGTGCATCTGTGTCAATGTCGATCTCTGTGGCTTCTTCTTCCTTGGTAGGTATTTTGATGGATTCTTCAGAATGGAGTGACATTACCTTATATTGGTAGAAGTGTGAGCATATAAGAAAATAAATAAGGTTCAGGACTCCCATAAGGGCAATAAAATAGAAGTAATAGTCGAGTTTGCCAAGATTAATGTTGTCTGTTAACCAGCTTGAGTGACCATCTCTGGTCGTGACCTTTCTCATGATGTTTGCCAGAGCAGTACTCAGGTAGTTTGCTCCAGCTATAGTACAGAAGAACAGAGATCCTGCTAGGGTTTGCATGTTCTCTGGAAACTGCTTATTGTAGAATTCTATTTGTCCAACTGCATTGAAGGCCTCAGCAATACCCATTAAAACAAGTTGGGGTGCAAGCCACAAGACTGACATAGGCGATATTCCTCCATTCGACAAGGCTGAGTTCCTCCTCTTACGTTCGACAAGTCCTGCTACCACCATTGAAATGGGAGAAATGGCCAATCCTATACCCTGTCTCTGTAGAAGTGTAATACCACTTTCCACTCCAGTGAATCCTCTAGCTATTGGTACTAAAATCCGGTCATAAATGGGGATGAATAGAGTTAGGGCAATAAGGGATATGGATACAACAGAGCCTGCTGGGATTTCAAAGTGCGTCCCAAAGTGACAGTCCATTGTAAATGTTTGCAAGATTATATAGGTGAATTGCTGAGCCAATGCGACAAAGCATAAGACTCCAGAAATACAAACCGGCACAATTCTTATTAAGCATTTGACCTCCTCTATTTGTTGGACGTTGCAAAGCTCCCAAGAGTTTCTTGCAGAACCATCAACATTTATATCATCACCCATTACAATTGCACCCTTGTTCAGAAACCTGAACTGGGAAGTAAGTGGCAATCTGAATACGCGGTTGCCCTTGGAAGGAGGGTTGTAGAGCATCAATCCTTGTTGGTTTATATCATGAGGACAAGGAAGCTTGAGATTTCTCTTTTTAAATGAAGCCACTAAAACCTGGGCAATTCCAGCAAATATGCTTCCCTCTGGTTGTACATGGACGTACAGGTTGGTACCCAGAAATAACATGATAATGGCGAGAAACATGAGTAATGTGGGTATGCCAAATCCTATTGGCCAGCTGACATTGTTCTGGATGTAGATGATGACAATCATAGATAACACAAGGGCAGCAGTACTTGTTCCATAGTACCAATTATAATAGCTGTTTAGTCCCTTTCGACCTTCTTCGTCGGTCTTATCAAACTGGTCTACTCCAAAGGGCAAGCTACAAGGCCGGATCGCTCCTCCACCGATAATTAGAAAGCCTAGAGAAAGGTATAGCACACTTAGCTGGAGTGTTGATGGACTGTTGCAGCCTCCGCCTAGTCGGGTTTTTTCATGGCAGATCGGTGGCTTGAGAGCTGGAAGTGATGCATACAAAGTCATTCCCAGCATCCCCAGGAGGCTGGCGAAGCATCCATAGGCTAGTGTTTTGAACCTTCCCAAGTAGACGTCGGAGATGAAGGCGCCTAGCAATGGCGCAAAGTTAAGCGTACCGAAGAATATGTTGGTAATATTAGCTGCCTCAATTTGCCCAATGTTGAAGCGCTTCACAAGATAGACCGTCAAATTTGCTACCACTCCAATTGTCGCAACCTTTTCAAATGTCTCAGTTGCTATGATGAATGGCATGCACTTCCAACCTTGCGGCGTCTTCCCCCTCTTGCCTGCCACAACTTCACCACCGACGACACCCCCGTTCTCAACGGCGCCGATCTCCATCTCCGTCTCCAAAGCGTACCCTCGCTACCACAGCAACCACCACCACCACCACCGCGCGGAACGGCGGAGGCCAACCAAAACACCGGCGAAAAACCTCGCTCTCCGCCCGCCGGTGCGCGCGCCAGCCAGCCAGCACCAGCGGCGCCGCGCGTATGTGAAAGTAGGCAATGCTA]
[-] EMBL AK100698 [GGTGTATGACCTGTGCTTACTTGTCGCATAACCATTATGGACTTGTTTAAGTTTCATAAGCTATCACTCACACTCCATTACTTCGAATACAACAGGACAGGCCATTTAAACTCTTTATTCATGTTTGCTAGATAACATGTCACCCCCTTGCTATGGTACACTTGTTTTTGTCACATCCATAAGATGACACAGAGGTCTGTTTGATGTTACAAACATTAGAGCCTCTTCTAAAGTGAATTCGAAATTGGAATTTGAATATGTCACCATGTCCAAAAGTATATTCCTTGTGCCAGATCAATTAGACTCGCAGTTGCACTATTCATTTGCTAGGTGCATCTGTGTCAATGTCGATCTCTGTGGCTTCTTCTTCCTTGGTAGGTATTTTGATGGATTCTTCAGAATGGAGTGACATTACCTTATATTGGTAGAAGTGTGAGCATATAAGAAAATAAATAAGGTTCAGGACTCCCATAAGGGCAATAAAATAGAAGTAATAGTCGAGTTTGCCAAGATTAATGTTGTCTGTTAACCAGCTTGAGTGACCATCTCTGGTCGTGACCTTTCTCATGATGTTTGCCAGAGCAGTACTCAGGTAGTTTGCTCCAGCTATAGTACAGAAGAACAGAGATCCTGCTAGGGTTTGCATGTTCTCTGGAAACTGCTTATTGTAGAATTCTATTTGTCCAACTGCATTGAAGGCCTCAGCAATACCCATTAAAACAAGTTGGGGTGCAAGCCACAAGACTGACATAGGCGATATTCCTCCATTCGACAAGGCTGAGTTCCTCCTCTTACGTTCGACAAGTCCTGCTACCACCATTGAAATGGGAGAAATGGCCAATCCTATACCCTGTCTCTGTAGAAGTGTAATACCACTTTCCACTCCAGTGAATCCTCTAGCTATTGGTACTAAAATCCGGTCATAAATGGGGATGAATAGAGTTAGGGCAATAAGGGATATGGATACAACAGAGCCTGCTGGGATTTCAAAGTGCGTCCCAAAGTGACAGTCCATTGTAAATGTTTGCAAGATTATATAGGTGAATTGCTGAGCCAATGCGACAAAGCATAAGACTCCAGAAATACAAACCGGCACAATTCTTATTAAGCATTTGACCTCCTCTATTTGTTGGACGTTGCAAAGCTCCCAAGAGTTTCTTGCAGAACCATCAACATTTATATCATCACCCATTACAATTGCACCCTTGTTCAGAAACCTGAACTGGGAAGTAAGTGGCAATCTGAATACGCGGTTGCCCTTGGAAGGAGGGTTGTAGAGCATCAATCCTTGTTGGTTTATATCATGAGGACAAGGAAGCTTGAGATTTCTCTTTTTAAATGAAGCCACTAAAACCTGGGCAATTCCAGCAAATATGCTTCCCTCTGGTTGTACATGGACGTACAGGTTGGTACCCAGAAATAACATGATAATGGCGAGAAACATGAGTAATGTGGGTATGCCAAATCCTATTGGCCAGCTGACATTGTTCTGGATGTAGATGATGACAATCATAGATAACACAAGGGCAGCAGTACTTGTTCCATAGTACCAATTATAATAGCTGTTTAGTCCCTTTCGACCTTCTTCGTCGGTCTTATCAAACTGGTCTACTCCAAAGGGCAAGCTACAAGGCCGGATCGCTCCTCCACCGATAATTAGAAAGCCTAGAGAAAGGTATAGCACACTTAGCTGGAGTGTTGATGGACTGTTGCAGCCTCCGCCTAGTCGGGTTTTTTCATGGCAGATCGGTGGCTTGAGAGCTGGAAGTGATGCATACAAAGTCATTCCCAGCATCCCCAGGAGGCTGGCGAAGCATCCATAGGCTAGTGTTTTGAACCTTCCCAAGTAGACGTCGGAGATGAAGGCGCCTAGCAATGGCGCAAAGTTAAGCGTACCGAAGAATATGTTGGTAATATTAGCTGCCTCAATTTGCCCAATGTTGAAGCGCTTCACAAGATAGACCGTCAAATTTGCTACCACTCCAATTGTCGCAACCTTTTCAAATGTCTCAGTTGCTATGATGAATGGCATGCACTTCCAACCTTGCGGCGTCTTCCCCCTCTTGCCTGCCACAACTTCACCACCGACGACACCCCCGTTCTCAACGGCGCCGATCTCCATCTCCGTCTCCAAAGCGTACCCTCGCTACCACAGCAACCACCACCACCACCACCGCGCGGAACGGCGGAGGCCAACCAAAACACCGGCGAAAAACCTCGCTCTCCGCCCGCCGGTGCGCGCGCCAGCCAGCCAGCACCAGCGGCGCCGCGCGTATGTGAAAGTAGGCAATGCTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8699#0 TCTCTCCGCCGCCGCCACCGCCGATCCACCACCCGACGAGTCGCCCCCTCCTCCTCCGCA 60
consensus_8699#1 ------------------------------------------------------------
consensus_8699#0 TCCTCCACCGCCACCGACGCCGCCCTCCAACTCGAAGCTCTTCGTCGCCGGGTTGTCGTG 120
consensus_8699#1 ------------------------------------------------------------
consensus_8699#0 GTCCGCGGACGAGCGGTCGCTGACGGACGCCTTCTCCTCCTTCGGCACCGTCACCGAAGA 180
consensus_8699#1 ------------------------------------------------------------
consensus_8699#0 TGGTGTGCGCGGTAGGTGTTCGATGAAACGGCTCGGAGGAGGAAGTGGGTGTTCCGCTCG 240
consensus_8699#1 ------------------------------------------------------------
consensus_8699#0 CGCGCGACCTCGCCAAATGTTCGATGAAATGCCTGTTAGGGATTTGGTCGCATGCTCGGC 300
consensus_8699#1 ------------------------------------------------------------
consensus_8699#0 TGCAATCTACCGGCATGCGAAGAGCGGGTTGTTTGGCGAGGCTGTCAGGCTGTTTGCTGG 360
consensus_8699#1 ------------------------------------------------------------
consensus_8699#0 TATGATGAGGGTGGGGGTGAGCCCCAACTCGTTCACATTGGTTGGTGCTTTAATAGCAGC 420
consensus_8699#1 ------------------------------------------------------------
consensus_8699#0 TGCTGGGATGGGCAACTTGGTGCTTGCTGAGTGCATCCATGGGTGGGCTATGAAGAGCCT 480
consensus_8699#1 ------------------------------------------------------------
consensus_8699#0 GTTGGAATCCAATCCTTTTGTTCGGACCGCATTGCTTGATTCCTATGCGAAATGTGGACG 540
consensus_8699#1 ------------------------------------------------------------
consensus_8699#0 TCCTACGAAGGCCTGGGCATTGTTTGGTGAAATGAGGGATCCTGGTATAGTTACTTGGAA 600
consensus_8699#1 ------------------------------------------------------------
consensus_8699#0 TGCATTGATTTCTGGTCTAGTGCACAACGATCTGTTTGAGGAAGCATTGCTGGTTTTCAA 660
consensus_8699#1 ------------------------------------------------------------
consensus_8699#0 GAGGTTGCTGTTTTCATTTGGACCAGTTCATAATGTTGTGACTATGATTAGCATTGCTCA 720
consensus_8699#1 ------GGTGTATG-ACCTGTGCTTACTTGTCGCATAACCATTATG----GACTTGTTTA 49
* *** * * ** * * * * * **** * *** * *
consensus_8699#0 GGCTTCTGCTGGTTGTGGTGACCTTGGATTGTGTGAGAGTGCACATGCTTATTCAGTCAA 780
consensus_8699#1 AGTTTCATAAGCTATCACTCACACTCCATTACTTCGAATACAACAGGACAGGCCATTTAA 109
* *** * * * ** * *** * * *** * ** * **
consensus_8699#0 GATTGGGCTTGATTCAGATGTCTCAG-TGACAAACTCAATCTTGGGTATG-TACTTGAGC 838
consensus_8699#1 ACT----CTTTATTCATGTTTGCTAGATAACATGTCACCCCCTTGCTATGGTACACTTGT 165
* *** ***** * * ** * *** * * * **** *** *
consensus_8699#0 TTTGGTAGTCTTGCGATTGGAAGAGAGATTTTCAAAAAGATCGCTGTTAATGATGTTGTT 898
consensus_8699#1 TTTTGTCACAT--CCATAAGATGA--------CACAGAGGT--CTGTT--TGATGTT--- 208
*** ** * * ** ** ** ** * ** * ***** *******
consensus_8699#0 TCTTGGACGATGATGATGGGTTTCCTTCTTGAGGAAGCCCAGGCTATTGAAGTTATACAT 958
consensus_8699#1 ------ACAA--ACATTAGAGCCTCTTCTAAAGTGAATTCGAA--ATTGGAATT-TGAAT 257
** * * * * ***** ** * * **** * ** * **
consensus_8699#0 ATGTTTGTTCAGATGAGGTTGAGTGGCATAGTGCCTGATAGGGTAGCATTGGTTACAGTG 1018
consensus_8699#1 ATGTC-------ACCATGTCCAAAAGTATATTCCTT----GTGCCAGATCAATTAGACTC 306
**** * * ** * * *** * * * * * ** *** * *
consensus_8699#0 GCGCAAGCTTGTGCACATCTGGGTGATGGAAGGATAGGAAAGTTGGTTC--ATAACGAGA 1076
consensus_8699#1 GCAGTTGCAC-TATTCATTTGCTAGGTGCATCTGTGTCAATGTCGATCTCTGTGGCTTCT 365
** ** * *** ** * ** * * ** ** * * * *
consensus_8699#0 TTGTAATCTGTGGGTTCAGTGGTGAGCTTCCTGCAGTTAACTCGT-TAATCACAATGTAT 1135
consensus_8699#1 TCTTCCTTGGTAGGTATTTTGATGGATTCTTCAGAATGGAGTGACATTACCTTATATTGG 425
* * * ** *** ** ** * * * * * * * * * *
consensus_8699#0 TCTAAATGTGAGGATTTAAGTTCTGCAAGACTGTTGTTTGATGGTACAATGGAGAAAAGC 1195
consensus_8699#1 TAGAAGTGTGAGCATATAAGAAAATAAATAAGGTTCAGGACTCCCATAAGGGCAATAAAA 485
* ** ****** ** **** ** * *** * * ** ** * **
consensus_8699#0 TTGGTTTCATGGACGGCAATGGTGTCAGCGTATATAGAAAATGGATATGCCCTAGAAGGG 1255
consensus_8699#1 TAGAAGTAATAGTCGA-------GTTTGCCAAGATTAATGTTGTCTGTTAACCAGCTTGA 538
* * * ** * ** ** ** * ** * ** * * * ** *
consensus_8699#0 ATGTATCTCTTTGCGAAGATGAGGCATGAAGGTTCCTTTATGATTGATTCTGTGACACTG 1315
consensus_8699#1 GTGACCATCTCTG---------GTCGTGA-----CCTTTCTCATGATGTTTGCCAGAGCA 584
** *** ** * * *** ***** * ** * ** * *
consensus_8699#0 GTCACCTTATTGCTTGCTTGCTATGAGGTTGCTAAGTTTGAACTATGTATTCAACTTCAT 1375
consensus_8699#1 GTACTCAGGTAGTTTGCTCCAGCTATAGTACAGAAGAACAGAGATCCTGCTAGGGTT--T 642
** * * * ***** * ** *** * * * ** *
consensus_8699#0 GCATATTGTTACAAATCGGGTTTGTGTCTGTACAAACCTGTTCTTAATACCCTCATTGCA 1435
consensus_8699#1 GCATGTTCTCTGGAAACTGCTT----ATTGTAGAATTCTATTTGTC-CAACTGCATTGAA 697
**** ** * ** * * ** **** ** ** ** * * * ***** *
consensus_8699#0 GTTTATGGTAAGTGTGGATATGCGACTTTAGCGCATAAAGTGTTTGATGAGATGATTTCT 1495
consensus_8699#1 GGCCTCAGCAATACCCATTAAAACAAGTTGGGGTGCAAGCC-----ACAAGACTGACATA 752
* * ** ** * ** * * ** * ***
consensus_8699#0 CGGAATGCTGTCTCATGGAATACTA-TGATTTTATCCTATGGTGTAAATGGCCAAGGAGA 1554
consensus_8699#1 GGCGATATTCCTCCATTCGACAAGGCTGAGTTCCTCCTCTTACGT---TCGACAAGTCCT 809
* ** * *** * * *** ** **** * ** * * ****
consensus_8699#0 GAAAGCAGTATCACTTTTCAATGAAATGGAGAAATCTAGCGAGGATCAAGACAGTGT-GA 1613
consensus_8699#1 GCTACCACCATTGAAATGGGA-GAAATGGCCAATCCTAT-----ACCCTGTCTCTGTAGA 863
* * ** ** * * ******* ** *** * * * * *** **
consensus_8699#0 CTTATTTGAACACATTGCTAGCATGTAGCCACTCTGGACTGGTGGATGATGGGATGCTCG 1673
consensus_8699#1 AGTGTAATACCACTTTCCACTCCAGTGAATCCTCTAG-CTATTGG-TACTAAAATCCGGT 921
* * * *** ** * * ** **** * ** *** * * ** *
consensus_8699#0 TCTTTAGAAGAATGGTTAATGACAAGGGAATAAT-----TCCATGCC-CAGAGCATGTCG 1727
consensus_8699#1 CATAAATGGGGATGAATAGAGTTAGGGCAATAAGGGATATGGATACAACAGAGCCTGCTG 981
* * * *** ** * * ** ***** * ** * ****** ** *
consensus_8699#0 GATGCATAGTTGATATGTTGGCAAGAGCTGGCCGCTTGGAGGAAGCAGCAGGAGTGGCTA 1787
consensus_8699#1 GGATTTCAA--AGTGCGTCCCAAAGTGACAGTCCATTGTAAATGTTTGCAAGATTATATA 1039
* * * ** *** * * * *** * *** ** * **
consensus_8699#0 GCTTGACTCACAATAAATTAGGAGCAAATGCTTGGAAGGCTTTGATGGGAGGAGGGCATT 1847
consensus_8699#1 GGTGAATTGCTGAGCCAATGCGA-CAAA-GCATAAGACTCCAGAAATACAAACCGGCACA 1097
* * * * * * * ** **** ** * * * * * ****
consensus_8699#0 -TGCATGGTGA-CATGAAATTTACTAAAGTTGCTGCAAAGAAGGTGCTCACCACGGAATC 1905
consensus_8699#1 ATTCTTATTAAGCATTTGACCTCCTCTATTTGTTGGACGTTGCAAAGCTCCCAAGAGTTT 1157
* * * * * *** * * ** * *** ** * *** * *
consensus_8699#0 ATTT---GATTATGGGCATGTTGTGTTACTTTCTAATGCTTATGCATCATCTGGCAAATA 1962
consensus_8699#1 CTTGCAGAACCATCAACAT-TTATATCATCACCCATTACAATTGCACCCTTGTTCAGAAA 1216
** * ** *** ** * * * * * * * **** * * ** * *
consensus_8699#0 TA-GAGCTGCTGAATCTGTCAGATCCTGT-TATGCAAAGCGAATTACAAGGAAAACTTTA 2020
consensus_8699#1 CCTGAACTGGGAAGTAAGTGGCAATCTGAATACGCGGTTGCCCTTGGAAGGAGGGTTGTA 1276
** *** * * ** * *** ** ** ** ***** * **
consensus_8699#0 GGGC-TTAGTTCCATTGAGATAGTGCCGTACAGCAGAAGATAGTAGAACAACTCTTACCT 2079
consensus_8699#1 GAGCATCAATCCTTGTTGGTTTATATCATG-AGGACAAGGAAGCTTGAGATTTCTCTTTT 1335
* ** * * * * * * * * * * ** * *** ** * * *** *
consensus_8699#0 AGGGAAGAGAGAAGATACATCAAACAATTAGTATTCACTGTCTGTCTGTCTCAAGCTATT 2139
consensus_8699#1 TAAATGAAGC-------CACTAAAACCTGGGCAATTCCAGCAAATATGCTTCCCTCTGGT 1388
** ** *** * * * * * * * ** ** ** *
consensus_8699#0 GGAATCTATCTCAGGCATAAGTTGAGTATTCACTTTCAGGTTGCCAAGTCTCCTGTGGAA 2199
consensus_8699#1 TGTACATGG---ACGTACAGGTTG-GTACCCAGAAATAACATGATAA--------TGGCG 1436
* * * * * * * **** *** ** * ** ** ***
consensus_8699#0 AAAGTAAAGCATCAAGCATGATTTTCAAATGCAAGTTGATGAAATAGATGATTGCCTTGG 2259
consensus_8699#1 AGAAACATGAGTAATGTGGGTATGCCAAATCCTA-TTGGCCAGCTGAC--ATTGTTCTGG 1493
* * * * * * * * * ***** * * *** * * **** ***
consensus_8699#0 ACCTTTTTCTTTAAAAGAA-AAATATGCCTTGGTCTATGGAACATGACCAACGATATCAC 2318
consensus_8699#1 ATGTAGATGATGACAATCATAGATAACACAAGGGCAGCAGTACTTGTTCCATAGTACCA- 1552
* * * * * ** * * *** * ** * * ** ** * * ** **
consensus_8699#0 ATCTCAACTCACTATTGCTCCAGGAATCTCTAACACGTGAATATGGATTCTAATGTGAGA 2378
consensus_8699#1 ATTATAA-TAGCTGTT----TAGTCCCTTTCGAC-CTTCTTCGTCGGTCTTA---TCAAA 1603
** ** * ** ** ** * ** * * * * * ** * * *
consensus_8699#0 ATAATGTATGACAAAAACTCTGGAAGGTCAAGAGGTTTTGGGTTTGTGCACTTCTCAAAC 2438
consensus_8699#1 CTGGTCTACTCCAAAG-----GGCAAGCTACAAGGCC---GGATCGCTC-CTCCACCGAT 1654
* * ** **** ** * * * *** ** * * * ** * * *
consensus_8699#0 GAGTATGAAGCTAAGTGCGCCAAGGATGCTATGGATGGAAAGGTAATGCTAGGACGACCA 2498
consensus_8699#1 AATTAGAAAGCCTAGAG----AAAGGTATAGCACACTTAGCTGGAGTGTTGATG-GACTG 1709
* ** **** ** * ** * * * * * * ** * ***
consensus_8699#0 TTGCGGATAAGTTTTGCTCTTGACAAGGTCCGTGGTGCTCCAGTTGTTGTTCCACGACTT 2558
consensus_8699#1 TTGCAG-----------CCTCCGCCTAGTCGG--GTTTTTTCATGGCAGATCGGTGGCTT 1756
**** * ** * *** * ** * * * * ** * ***
consensus_8699#0 TCCACGGTGAAATGAAACTACTAAGAGAGATGGTTTGGTCATCATATGGACATACCAGGA 2618
consensus_8699#1 ------GAGAGCTGGAAGTGATGCATACAAAGTCATTCCCAGCATCC-------CCAGGA 1803
* ** ** ** * * * * * ** *** ******
consensus_8699#0 GGCTGGCGAAGCATCCATAGGCTAGTGTTTTGAACCTTCCCAAGTAGACGTCGGAGATGA 2678
consensus_8699#1 GGCTGGCGAAGCATCCATAGGCTAGTGTTTTGAACCTTCCCAAGTAGACGTCGGAGATGA 1863
************************************************************
consensus_8699#0 AGGCGCCTAGCAATGGCGCAAAGTTAAGCGTACCGAAGAATATGTTGGTAATATTAGCTG 2738
consensus_8699#1 AGGCGCCTAGCAATGGCGCAAAGTTAAGCGTACCGAAGAATATGTTGGTAATATTAGCTG 1923
************************************************************
consensus_8699#0 CCTCAATTTGCCCAATGTTGAAGCGCTTCACAAGATAGACCGTCAAATTTGCTACCACTC 2798
consensus_8699#1 CCTCAATTTGCCCAATGTTGAAGCGCTTCACAAGATAGACCGTCAAATTTGCTACCACTC 1983
************************************************************
consensus_8699#0 CAATTGTCGCAACCTTTTCAAATGTCTCAGTTGCTACATAGATACAATCAGAAAAGGGCA 2858
consensus_8699#1 CAATTGTCGCAACCTTTTCAAATGTCTCAGTTGCTAT---GATG---------AATGGCA 2031
************************************ *** ** ****
consensus_8699#0 TCCATTCAGTACATTATAATGAGCATTTTGATTTGATCCGCTTGAAGTACAACATAATTC 2918
consensus_8699#1 TGCACTTCCAACCTTGCGGCGT-CTTCCCCCTCTTGCCTGCCACAACTTCACCACCGACG 2090
* ** * ** ** * * * * * * ** ** * ** **
consensus_8699#0 ATTCGTGAATCCCTTTTTGCTTTGATTTGAGGCAGGGTGTGTCCTGTGCAGGGATCACCG 2978
consensus_8699#1 ACACCCCCGTTCTCAACGGCGCCGATCTCCATCTC--CGTCTCCAAAGC-GTACCCTCGC 2147
* * * * ** *** * * ** *** ** * * *
consensus_8699#0 GGTTAGAGCACCCATGTTGTCATGTCTAAATTTAGACAAAGAAGCCAAGCCAAGCCAGAC 3038
consensus_8699#1 TACCACAGCAACCAC-----CACCACCACCACCGCGCGGAACGGCGGAGGCCAACCAAAA 2202
* **** *** ** * * * * ** ** * * *** *
consensus_8699#0 CAAATCAACATATACTTGGTCTAGGCTCAGAGTCTGAAAATACTCTTATATTGAATGGAT 3098
consensus_8699#1 CACCGGCGAAAAACCTCGCTCTCCGCCC---GCCGGTGCGCGCGCC---AGCCAGCCAGC 2256
** * * ** * *** ** * * * * * * * *
consensus_8699#0 ATTAGTATATGATTTACGGTAGTCATGTAGAAGTAT-TAATGAGATGATTCACGAATACG 3157
consensus_8699#1 ACCAGCGG------CGCCGCGCGTATGTGAAAGTAGGCAATGCTA--------------- 2295
* ** * * **** ***** **** *
consensus_8699#0 AGTGATTAAAAGAGTCTTC 3176
consensus_8699#1 -------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||