cluster # 8708

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Oryza sativa
cluster # 8708 cluster # 8708 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8708#0 length = 2047 sequences # 5
consensusID : consensus_8708#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2047
fasta sequence
                              [TGAAAATGAAGGTATTTGGTATTGCGGACTTGGTTATAAGTGAATTGGATATTGAGATGCCTAGTTACCTGGGACTGCTTACACTACTACAAAACGATTGGCACACAAGAAAAAGATCCATGGAAACATGGAGAATGGAGATGTTCAGTTCATCTATTGTCCAAAGATCTCTGGTTTATCTTGTAGTGCATGGCTAAAAATAACATTTGAGATTCGGGGGAAATAATGGTGGAAGGAGTGCTTGGTAAGTTGGAAAATAGCTCAGGACACCACTTGTTTCTGGAATGTCCGTCTGTTTCTTCGGATTGTAGAAATTGAAGGGTGGAACTCCTTGCAGAGGATTAGATCATGCTCCAGGAGGCCTAACCTATATGATATGAATTGGATAAAGAGATGAACCAGGCTTTAGGAACATGTGAATTCTGCAAGACTGGCGAGCCCAAATGTGGGTTGCTGCATTGTTGATATTTTAACTACTTTATAAACCAGACAAGAGATCAGGATCATATGGTGCTGAGTTCACCTTCAATTACTGTGCTGTTTACTTGACAGAAATTATTTTCAGAGGCTTATTTCTGCAATGCATTTTTTTTCTGGTTTGACTCTTGAGGGCCTTTGCTGAAAGCAGTTCACCTTCAGGAGTTGCAGAACTCATGCATGATGCAAGTCCTACTTGCTGACTGTTACTCCTTGTGGCTTCTAATGTTCATGTAGAATGTTTGTCGCTCGCCTTTCAGGATATCACCCGCACTCAGGTTCCATGATACCTCCACGTGGCCGCGGAGTAGAAAGCAGCAATTTCAATGACGGTTCACGTTATGGATATGAGCTGGCAAGTAAAGGAGGTGAAAGGTTACAATATGTTTCTCCTCCCAATGGAAGAGGAAGACCACACAGGAGGGATGGTGGTGCTCCTGGAAAAGATTTCATCTTCATTAATGGAGAATATGTGCACAGGAATGACCCAAACTTGTCTCCAAGAGAAGGTGACTGGATATGTCAGAATCCCACTTGCGGAAATCTTAATTTTGCTCGGCGGTCTCACTGTAACAACTGCAACAAGGAACGCTATGCACCTGCCATGTACAAGTCCAGCTACAGTCCTGACAGACGCCAGTTCAACTCTCCACCACAAGGGCCACCGAGTAGGGTTATTGGTCCACCGAGTGGCCGTGATCTGCCAAGGGAGAAACAAAGGTATAGATCACCACCGCGTGGTTGGGGTATGGTCCGACCGGATGATCATAGGGACTATTCTACGCAGTTGTCCCAAGATCGTCCAGGACGAATGGCAGACCCTATGCACAGGGACAGGATCAACTTCGGGGATGAACTTCCACACCGACAGCGTGGGAAGTTTGACTGGGATGGCTATAATCACCGGGAGCATCCACGCGATGGACCATATCTTGACCGAAGAGAACCACGGTTGGGGTCTCCCAGGGGTAACTGGGGACAAGCTGTACGGGACAGAAGTCATTCACCCATGCGTAACAAGCCCATGAACAGGGGACTAGACTTACGGGAGAGAAGCCGTTCACCCTTTCGGGACAGGCCCTTGAACAAAGCCTCCATTGGAAGAGGTGGACCTGACCGAGACTATGTTCATCCATTTGACACCCATGGGCGACCTCATAATTTGGGCAATAGCCGTGGCCATGGTTACAGGCAGGAGGAT-GATCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTTTCCCGTCATCGGAATGGAATCCACTGAAATGTAATATCTTTCAGCTGGGTACAGATTCTTCGTGTTGATAGGCTATCTGGAAAAGCGAATCTAATAAAAATTATCTCGATGCTTGAGGACTCCTGAAGCTTTGTAATAATGTTTAATGTTTTGTACTGTGTAGTTACTTCCTTGGTTGGGTTGTTTCAGTGGAAGTTTCACCATTAGAAATGTCTTCATGAACTGAATTTAAAGGGCAATGCTAGGAATGAATATTGGAGTGGTTAAAGATGAACACAACCATACTGTGCTCTGTATGTTTTATTGTGTGAAATCTTGAGGTGTAAA]

[+] EMBL AK105691             [TGAAAATGAAGGTATTTGGTATTGCGGACTTGGTTATAAGTGAATTGGATATTGAGATGCCTAGTTACCTGGGACTGCTTACACTACTACAAAACGATTGGCACACAAGAAAAAGATCCATGGAAACATGGAGAATGGAGATGTTCAGTTCATCTATTGTCCAAAGATCTCTGGTTTATCTTGTAGTGCATGGCTAAAAATAACATTTGAGATTCGGGGGAAATAATGGTGGAAGGAGTGCTTGGTAAGTTGGAAAATAGCTCAGGACACCACTTGTTTCTGGAATGTCCGTCTGTTTCTTCGGATTGTAGAAATTGAAGGGTGGAACTCCTTGCAGAGGATTAGATCATGCTCCAGGAGGCCTAACCTATATGATATGAATTGGATAAAGAGATGAACCAGGCTTTAGGAACATGTGAATTCTGCAAGACTGGCGAGCCCAAATGTGGGTTGCTGCATTGTTGATATTTTAACTACTTTATAAACCAGACAAGAGATCAGGATCATATGGTGCTGAGTTCACCTTCAATTACTGTGCTGTTTACTTGACAGAAATTATTTTCAGAGGCTTATTTCTGCAATGCATTTTTTTTCTGGTTTGACTCTTGAGGGCCTTTGCTGAAAGCAGTTCACCTTCAGGAGTTGCAGAACTCATGCATGATGCAAGTCCTACTTGCTGACTGTTACTCCTTGTGGCTTCTAATGTTCATGTAGAATGTTTGTCGCTCGCCTTTCAGGATATCACCCGCACTCAGGTTCCATGATACCTCCACGTGGCCGCGGAGTAGAAAGCAGCAATTTCAATGACGGTTCACGTTATGGATATGAGCTGGCAAGTAAAGGAGGTGAAAGGTTACAATATGTTTCTCCTCCCAATGGAAGAGGAAGACCACACAGGAGGGATGGTGGTGCTCCTGGAAAAGATTTCATCTTCATTAATGGAGAATATGTGCACAGGAATGACCCAAACTTGTCTCCAAGAGAAGGTGACTGGATATGTCAGAATCCCACTTGCGGAAATCTTAATTTTGCTCGGCGGTCTCACTGTAACAACTGCAACAAGGAACGCTATGCACCTGCCATGTACAAGTCCAGCTACAGTCCTGACAGACGCCAGTTCAACTCTCCACCACAAGGGCCACCGAGTAGGGTTATTGGTCCACCGAGTGGCCGTGATCTGCCAAGGGAGAAACAAAGGTATAGATCACCACCGCGTGGTTGGGGTATGGTCCGACCGGATGATCATAGGGACTATTCTACGCAGTTGTCCCAAGATCGTCCAGGACGAATGGCAGACCCTATGCACAGGGACAGGATCAACTTCGGGGATGAACTTCCACACCGACAGCGTGGGAAGTTTGACTGGGATGGCTATAATCACCGGGAGCATCCACGCGATGGACCATATCTTGACCGAAGAGAACCACGGTTGGGGTCTCCCAGGGGTAACTGGGGACAAGCTGTACGGGACAGAAGTCATTCACCCATGCGTAACAAGCCCATGAACAGGGGACTAGACTTACGGGAGAGAAGCCGTTCACCCTTTCGGGACAGGCCCTTGAACAAAGCCTCCATTGGAAGAGGTGGACCTGACCGAGACTATGTTCATCCATTTGACACCCATGGGCGACCTCATAATTTGGGCAATAGCCGTGGCCATGGTTACAGGCAGGAGGAT GATCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTTTCCCGTCATCGGAATGGAATCCACTGAAATGTAATATCTTTCAGCTGGGTACAGATTCTTCGTGTTGATAGGCTATCTGGAAAAGCGAATCTAATAAAAATTATCTCGATGCTTGAGGACTCCTGAAGCTTTGTAATAATGTTTAATGTTTTGTACTGTGTAGTTACTTCCTTGGTTGGGTTGTTTCAGTGGAAGTTTCACCATTAGAAATGTCTTCATGAACTGAATTTAAAGGGCAATGCTAGGAATGAATATTGGAGTG                                                                 ]
[-] EMBL CB654431             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGATCGTCCAGGACGAATGGCAGACCCTATGCACAGGGACAGGATCAACTTCGGGGATGAACTTCCACACCGACAGCGTGGGAAGTTTGACTGGGATGGCTATAATCACCGGGAGCATCCACGCGATGGACCATATCTTGACCGAAGAGAACCACGGTTGGGGTCTCCCAGGGGTAACTGGGGACAAGCTGTACGGGACAGAAGTCATTCACCCATGCGTAACAAGCCCATGAACAGGGGACTAGACTTACGGGAGAGAAGCCGTTCACCCTTTCGGGACAGGCCCTTGAACAAAGCCTCCATTGGAAGAGGTGGACCTGACCGAGACTATGTTCATCCATTTGACACCCATGGGCGACCTCATAATTTGGGCAATAGCCGTGGCCATGGTTACAGGCAGGAGGAT GATCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTTTCCCGTCATCGGAATGGAATCCACTGAAATGTAATATCTTTCAGCTGGGTACAGATTTTTTGTGTTGATAGGCTATCTGGAAAAGCGAATGTAATAAAAATTATCTCGATGCTTGAGGACTCCTGAAGCTTTGTAATAATGTTTAATGTTTTGTACTGTGTAGTTCCTTCCTTGGTTGGGTTGTTTCAGTGGAAGTTTCTCCATTAGAAATGTCTTCATGAACTGAATTTAAAGGGCAATGCTAGGAATGAATATTGGAGTGGTTAAAGATGAACACAACCATTCTGTGCTCTGTATGTTTTATTGTG GAAAaaaggga       ]
[-] EMBL CB640003             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGGGACAAGCTGTACGGGACAGAAGTCATTCACCCATGCGTAACAAGCCCATGAACAGGGGACTAGACTTACGGGAGAGAAGCCGTTCACCCTTTCGGGACAGGCCCTTGAACAAAGCCTCCATTGGAAGAGGTGGACCTGACCGAGACTATGTTCATCCATTTGACACCCATGGGCGACCTCATAATTTGGGCAATAGCCGTGGCCATGGTTACAGGCAGGAGGAT GATCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTTTCCCGTCATCGGAATGGAATCCACTGAAATGTAATATCTTTCAGCTGGGTACAGATTCTTCGTGTTGATAGGCTATCTGGAAAAGCGAATCTAATAAAAATTATCTCGATGCTTGAGGACTCCTGAAGCTTTGTAATAATGTTTAATGTTTTGTACTGTGTAGTTACTTCCTTGGTTGGGTTGTTTCAGTGGAAGTTTCACCATTAGAAATGTCTTCATGAACTGAATTTAAAGGGCAATGCTAGGAATGAATATTGGAGTGGTTAAAGATGAACACAACCATACTGTGCTCTGTATGTTTTATTGTGTGAAATCTTGAGGTGTAAA]
[-] EMBL CB636354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGTCATTCACCCATGCGTAACAAGCCCATGAACAGGGGACTAGACTTACGGGAGAGAAGCCGTTCACCCTTTCGGGACAGGCCCTTGAACAAAGCCTCCATTGGAAGAGGTGGACCTGACCGAGACTATGTTCATCCATTTGACACCCATGGGCGACCTCATAATTTGGGCAATAGCCGTGGCCATGGTTACAGGCAGGAGGAT GATCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTTTCCCGTCATCGGAATGGAATCCACTGAAATGTAATATCTTTCAGCTGGGTACAGATTCTTCGTGTTGATAGGCTATCTGGAAAAGCGAATCTAATAAAAATTATCTCGATGCTTGAGGACTCCTGAAGCTTTGTAATAATGTTTAATGTTTTGTACTGTGTAGTTACTTCCTTGGTTGGGTTGTTTCAGTGGAAGTTTCACCATTAGAAATGTCTTCATGAACTGAATTTAAAGGGCAATGCTAGGAATGAATATTGGAGTGGTTAAAGATGAACACAACCATACTGTGCTCTGTATGTTTTATTGTGTGAAATCTTGAGGTGTAA ]
[-] EMBL AW069923             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCCGAGGTTACAGGCA GAGGATNGATCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTCTCCCGTCATCGGAATGGAATCCACTGAAATGTAATATCTTTC                                                                                                                                                                                                                                                                                             ]




>consensus_8708#0
TGAAAATGAAGGTATTTGGTATTGCGGACTTGGTTATAAGTGAATTGGATATTGAGATGC
CTAGTTACCTGGGACTGCTTACACTACTACAAAACGATTGGCACACAAGAAAAAGATCCA
TGGAAACATGGAGAATGGAGATGTTCAGTTCATCTATTGTCCAAAGATCTCTGGTTTATC
TTGTAGTGCATGGCTAAAAATAACATTTGAGATTCGGGGGAAATAATGGTGGAAGGAGTG
CTTGGTAAGTTGGAAAATAGCTCAGGACACCACTTGTTTCTGGAATGTCCGTCTGTTTCT
TCGGATTGTAGAAATTGAAGGGTGGAACTCCTTGCAGAGGATTAGATCATGCTCCAGGAG
GCCTAACCTATATGATATGAATTGGATAAAGAGATGAACCAGGCTTTAGGAACATGTGAA
TTCTGCAAGACTGGCGAGCCCAAATGTGGGTTGCTGCATTGTTGATATTTTAACTACTTT
ATAAACCAGACAAGAGATCAGGATCATATGGTGCTGAGTTCACCTTCAATTACTGTGCTG
TTTACTTGACAGAAATTATTTTCAGAGGCTTATTTCTGCAATGCATTTTTTTTCTGGTTT
GACTCTTGAGGGCCTTTGCTGAAAGCAGTTCACCTTCAGGAGTTGCAGAACTCATGCATG
ATGCAAGTCCTACTTGCTGACTGTTACTCCTTGTGGCTTCTAATGTTCATGTAGAATGTT
TGTCGCTCGCCTTTCAGGATATCACCCGCACTCAGGTTCCATGATACCTCCACGTGGCCG
CGGAGTAGAAAGCAGCAATTTCAATGACGGTTCACGTTATGGATATGAGCTGGCAAGTAA
AGGAGGTGAAAGGTTACAATATGTTTCTCCTCCCAATGGAAGAGGAAGACCACACAGGAG
GGATGGTGGTGCTCCTGGAAAAGATTTCATCTTCATTAATGGAGAATATGTGCACAGGAA
TGACCCAAACTTGTCTCCAAGAGAAGGTGACTGGATATGTCAGAATCCCACTTGCGGAAA
TCTTAATTTTGCTCGGCGGTCTCACTGTAACAACTGCAACAAGGAACGCTATGCACCTGC
CATGTACAAGTCCAGCTACAGTCCTGACAGACGCCAGTTCAACTCTCCACCACAAGGGCC
ACCGAGTAGGGTTATTGGTCCACCGAGTGGCCGTGATCTGCCAAGGGAGAAACAAAGGTA
TAGATCACCACCGCGTGGTTGGGGTATGGTCCGACCGGATGATCATAGGGACTATTCTAC
GCAGTTGTCCCAAGATCGTCCAGGACGAATGGCAGACCCTATGCACAGGGACAGGATCAA
CTTCGGGGATGAACTTCCACACCGACAGCGTGGGAAGTTTGACTGGGATGGCTATAATCA
CCGGGAGCATCCACGCGATGGACCATATCTTGACCGAAGAGAACCACGGTTGGGGTCTCC
CAGGGGTAACTGGGGACAAGCTGTACGGGACAGAAGTCATTCACCCATGCGTAACAAGCC
CATGAACAGGGGACTAGACTTACGGGAGAGAAGCCGTTCACCCTTTCGGGACAGGCCCTT
GAACAAAGCCTCCATTGGAAGAGGTGGACCTGACCGAGACTATGTTCATCCATTTGACAC
CCATGGGCGACCTCATAATTTGGGCAATAGCCGTGGCCATGGTTACAGGCAGGAGGATGA
TCTGTTTCCTATTCGCAATCAAGGTGACCAGCGTGTCCTTTCCCGTCATCGGAATGGAAT
CCACTGAAATGTAATATCTTTCAGCTGGGTACAGATTCTTCGTGTTGATAGGCTATCTGG
AAAAGCGAATCTAATAAAAATTATCTCGATGCTTGAGGACTCCTGAAGCTTTGTAATAAT
GTTTAATGTTTTGTACTGTGTAGTTACTTCCTTGGTTGGGTTGTTTCAGTGGAAGTTTCA
CCATTAGAAATGTCTTCATGAACTGAATTTAAAGGGCAATGCTAGGAATGAATATTGGAG
TGGTTAAAGATGAACACAACCATACTGTGCTCTGTATGTTTTATTGTGTGAAATCTTGAG
GTGTAAA
clustalw multiple alignements is not computed in this case