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Oryza sativa
cluster # 8721 cluster # 8721       Sequences # 5       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8721#0 length = 1714 sequences # 1  
consensus_8721#1 length = 1603 sequences # 4  

consensusID : consensus_8721#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1714
fasta sequence
                              [CACTACGCATCAAACAACAGCCGAACTGTTGAGTCCCAAGAAGTCAAGAACCCAAGGTGTTCGACCATGTGTTCGGCGGCAACACCCAACTCCGGCGACGTCCGTGCTACCCCAGGATCATCGCGGCCGCACGTCGTCCTCCTACCAAGCGCCGGCATGGGCCACCTGGTTCCCTTCACCCGCCTCGCCGCCGCGCTGTGCTCCGGCCATGGCTGCGACGTGTCCCTCGTCGCGGCCGTGCCCACCGTGTCGTCGGCCGAGGCACGCCACCTCGCCGCGCACTTCACCGCGTTCCCCGCCGTTCGACGGCTCGAGCTCGACCTCGCGTCCCTCGACGTGTCCGAGTTCGCCGGCGCCGACCCGTTCTACGTCCGTTACGAGGCCATCCGCCGGTCGGCGTCGCTCCTGGCGCCGCTCCTCGCCGGCGGCGCGTCGGCGGCGGCGTCGGCGCTGGTCGCTGACATCGCCTTGGCCTCCGTTGTGATACCGGTGGCCAAGGACCTCCGCCTCCCGTGCTACGTCTTCTTCACCGCCTCCGCCACGATGTTCTCCTTCCTCGCCTACCTGCCCACCTACCTCAACGCCAACGCCGGCGGCGGGCACGCCATCGGCGACGTCGACGTCCCCGGCGTGTGCCGCGTTCCGACGTCATCCGTCCCGCAGGCGCTGCACGACCCGGACGACATCTTCACCCGGCAGTTCATCGCGAACGCTCGCAGCCTCGCGAACGCAGACGGCCTCGTCGTCAACGCGTTCGACGCCCTGGAGCCGGAGGCCGTCGCGGCGTTGCGGCAGGGAACCGTCGCCGCCGGGTTACCGCCGGTGTTCGCCGTTGGGCCACTCAGCCCGGCGCCCATTCCGGCGAAAGATTCAGGCAGCTACTTGCCGTGGCTCGACGCGCAGCCGGCGCGGTCGGTGGTTTACGTCAGCTTCGGCAGCCGCAAGGCGTTGCCAAGAGACCAGCTGAGCGAGCTCGCCGCCGGGCTAGAAGCAAGCGGCCACCGTTTCTTGTGGGTGGTGAAGGGCGCCGTCGTGGACAGAGACGACGCCGGCGAGCTCACCGACCTGCTCGGAGAAGCCTTCCTGCAGAGAATCCATGGCCGTGGCCTCGTGACCATGGCGTGGGTGCGTCAAGAGGAGGTCCTGAACCACCCCTCCGTCGGTCTGTTCATCAGCCACTGCGGGTGGAGCTCGGTGACGGAGGCGGCGGCGAGCGGCGTGCCGGTGGTGGCGTGGCCGAGGTTCGCCGACCAGCGGGTGAACGCCGGCGTGGTGGCGCGCGCGGGGATCGGCGTGTGGGTGGACACCTGGAGCTGGGAGGGGGAGGATGATGGGGTGGTGAGCGCGGAGGACATCGCCGGGAAGGTGAGGTCGGCGATGGCCGACGAGGGTGTAAGGAAGGCGGCGGCGAGCGTCCGTGAGGCCGCGGCGAGGGCGGTGGCCGCCGGAGGGAGCAGCTACCGGAGCTTGGCGGAGTTGGTGCGACGGTGCCGTGATGGGCTTGTCATCACGAACGGAATGTGAGAGAAGCGAGGAGAAGACGGAATGGGCAAACGTCCAAACGAAATGGCAGCATCTTCAAGCATTGTCAGTCAGTCACCACAGTCCACAGGTGGTAGGCTCACATCATAAAAAACCTTTTTGTTCCATGATAAGCACACATGCACGAGATGTCACCAACAATTTCAACCAAAATTATCAACCCAAATAGTAT]

[+] EMBL AK106250             [CACTACGCATCAAACAACAGCCGAACTGTTGAGTCCCAAGAAGTCAAGAACCCAAGGTGTTCGACCATGTGTTCGGCGGCAACACCCAACTCCGGCGACGTCCGTGCTACCCCAGGATCATCGCGGCCGCACGTCGTCCTCCTACCAAGCGCCGGCATGGGCCACCTGGTTCCCTTCACCCGCCTCGCCGCCGCGCTGTGCTCCGGCCATGGCTGCGACGTGTCCCTCGTCGCGGCCGTGCCCACCGTGTCGTCGGCCGAGGCACGCCACCTCGCCGCGCACTTCACCGCGTTCCCCGCCGTTCGACGGCTCGAGCTCGACCTCGCGTCCCTCGACGTGTCCGAGTTCGCCGGCGCCGACCCGTTCTACGTCCGTTACGAGGCCATCCGCCGGTCGGCGTCGCTCCTGGCGCCGCTCCTCGCCGGCGGCGCGTCGGCGGCGGCGTCGGCGCTGGTCGCTGACATCGCCTTGGCCTCCGTTGTGATACCGGTGGCCAAGGACCTCCGCCTCCCGTGCTACGTCTTCTTCACCGCCTCCGCCACGATGTTCTCCTTCCTCGCCTACCTGCCCACCTACCTCAACGCCAACGCCGGCGGCGGGCACGCCATCGGCGACGTCGACGTCCCCGGCGTGTGCCGCGTTCCGACGTCATCCGTCCCGCAGGCGCTGCACGACCCGGACGACATCTTCACCCGGCAGTTCATCGCGAACGCTCGCAGCCTCGCGAACGCAGACGGCCTCGTCGTCAACGCGTTCGACGCCCTGGAGCCGGAGGCCGTCGCGGCGTTGCGGCAGGGAACCGTCGCCGCCGGGTTACCGCCGGTGTTCGCCGTTGGGCCACTCAGCCCGGCGCCCATTCCGGCGAAAGATTCAGGCAGCTACTTGCCGTGGCTCGACGCGCAGCCGGCGCGGTCGGTGGTTTACGTCAGCTTCGGCAGCCGCAAGGCGTTGCCAAGAGACCAGCTGAGCGAGCTCGCCGCCGGGCTAGAAGCAAGCGGCCACCGTTTCTTGTGGGTGGTGAAGGGCGCCGTCGTGGACAGAGACGACGCCGGCGAGCTCACCGACCTGCTCGGAGAAGCCTTCCTGCAGAGAATCCATGGCCGTGGCCTCGTGACCATGGCGTGGGTGCGTCAAGAGGAGGTCCTGAACCACCCCTCCGTCGGTCTGTTCATCAGCCACTGCGGGTGGAGCTCGGTGACGGAGGCGGCGGCGAGCGGCGTGCCGGTGGTGGCGTGGCCGAGGTTCGCCGACCAGCGGGTGAACGCCGGCGTGGTGGCGCGCGCGGGGATCGGCGTGTGGGTGGACACCTGGAGCTGGGAGGGGGAGGATGATGGGGTGGTGAGCGCGGAGGACATCGCCGGGAAGGTGAGGTCGGCGATGGCCGACGAGGGTGTAAGGAAGGCGGCGGCGAGCGTCCGTGAGGCCGCGGCGAGGGCGGTGGCCGCCGGAGGGAGCAGCTACCGGAGCTTGGCGGAGTTGGTGCGACGGTGCCGTGATGGGCTTGTCATCACGAACGGAATGTGAGAGAAGCGAGGAGAAGACGGAATGGGCAAACGTCCAAACGAAATGGCAGCATCTTCAAGCATTGTCAGTCAGTCACCACAGTCCACAGGTGGTAGGCTCACATCATAAAAAACCTTTTTGTTCCATGATAAGCACACATGCACGAGATGTCACCAACAATTTCAACCAAAATTATCAACCCAAATAGTAT]


>consensus_8721#0 CACTACGCATCAAACAACAGCCGAACTGTTGAGTCCCAAGAAGTCAAGAACCCAAGGTGT TCGACCATGTGTTCGGCGGCAACACCCAACTCCGGCGACGTCCGTGCTACCCCAGGATCA TCGCGGCCGCACGTCGTCCTCCTACCAAGCGCCGGCATGGGCCACCTGGTTCCCTTCACC CGCCTCGCCGCCGCGCTGTGCTCCGGCCATGGCTGCGACGTGTCCCTCGTCGCGGCCGTG CCCACCGTGTCGTCGGCCGAGGCACGCCACCTCGCCGCGCACTTCACCGCGTTCCCCGCC GTTCGACGGCTCGAGCTCGACCTCGCGTCCCTCGACGTGTCCGAGTTCGCCGGCGCCGAC CCGTTCTACGTCCGTTACGAGGCCATCCGCCGGTCGGCGTCGCTCCTGGCGCCGCTCCTC GCCGGCGGCGCGTCGGCGGCGGCGTCGGCGCTGGTCGCTGACATCGCCTTGGCCTCCGTT GTGATACCGGTGGCCAAGGACCTCCGCCTCCCGTGCTACGTCTTCTTCACCGCCTCCGCC ACGATGTTCTCCTTCCTCGCCTACCTGCCCACCTACCTCAACGCCAACGCCGGCGGCGGG CACGCCATCGGCGACGTCGACGTCCCCGGCGTGTGCCGCGTTCCGACGTCATCCGTCCCG CAGGCGCTGCACGACCCGGACGACATCTTCACCCGGCAGTTCATCGCGAACGCTCGCAGC CTCGCGAACGCAGACGGCCTCGTCGTCAACGCGTTCGACGCCCTGGAGCCGGAGGCCGTC GCGGCGTTGCGGCAGGGAACCGTCGCCGCCGGGTTACCGCCGGTGTTCGCCGTTGGGCCA CTCAGCCCGGCGCCCATTCCGGCGAAAGATTCAGGCAGCTACTTGCCGTGGCTCGACGCG CAGCCGGCGCGGTCGGTGGTTTACGTCAGCTTCGGCAGCCGCAAGGCGTTGCCAAGAGAC CAGCTGAGCGAGCTCGCCGCCGGGCTAGAAGCAAGCGGCCACCGTTTCTTGTGGGTGGTG AAGGGCGCCGTCGTGGACAGAGACGACGCCGGCGAGCTCACCGACCTGCTCGGAGAAGCC TTCCTGCAGAGAATCCATGGCCGTGGCCTCGTGACCATGGCGTGGGTGCGTCAAGAGGAG GTCCTGAACCACCCCTCCGTCGGTCTGTTCATCAGCCACTGCGGGTGGAGCTCGGTGACG GAGGCGGCGGCGAGCGGCGTGCCGGTGGTGGCGTGGCCGAGGTTCGCCGACCAGCGGGTG AACGCCGGCGTGGTGGCGCGCGCGGGGATCGGCGTGTGGGTGGACACCTGGAGCTGGGAG GGGGAGGATGATGGGGTGGTGAGCGCGGAGGACATCGCCGGGAAGGTGAGGTCGGCGATG GCCGACGAGGGTGTAAGGAAGGCGGCGGCGAGCGTCCGTGAGGCCGCGGCGAGGGCGGTG GCCGCCGGAGGGAGCAGCTACCGGAGCTTGGCGGAGTTGGTGCGACGGTGCCGTGATGGG CTTGTCATCACGAACGGAATGTGAGAGAAGCGAGGAGAAGACGGAATGGGCAAACGTCCA AACGAAATGGCAGCATCTTCAAGCATTGTCAGTCAGTCACCACAGTCCACAGGTGGTAGG CTCACATCATAAAAAACCTTTTTGTTCCATGATAAGCACACATGCACGAGATGTCACCAA CAATTTCAACCAAAATTATCAACCCAAATAGTAT



consensusID : consensus_8721#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1603
fasta sequence
                              [CACGCACACGGCACACCTACTCCCGCTTCACATCGCCAGGTGTTCGACCGAGGCCACCACCGGCAATGCCGAGCTCTGGCGACGCGGCGGGCAGGCGGCCGCGTGTGGTGCTCATCCCGAGCGCCGGCATGGGCCACCTCGTCCCCTTCGGCCGCCTCGCCGTGGCGCTCTCCTCCGGCCACGGCTGCGACGTCTCCCTCGTCACGGTGCTCCCCACGGTGTCCACCGCGGAGTCGAAGCACCTCGACGCGCTGTTCGACGCGTTCCCGGCGGTGCGGCGGCTCGACTTCGAGCTCGCGCCGTTCGACGCGTCGGAGTTCCCCAGCGCCGACCCGTTCTTCCTCCGGTTCGAGGCCATGCGGCGGTCGGCGCCGCTGCTCGGCCCGCTCCTCACCGGCGCCGGCGCATCGGCGCTCGCCACGGACATCGCGCTGACATCCGTCGTCATACCCGTGGCGAAGGAGCAGGGCCTCCCGTGCCACATCCTCTTCACCGCCTCCGCCGCGATGCTCTCCCTCTGCGCCTACTTCCCCACATACCTCGACGCCAACGCTGGCGACGGCGGCGGCGTCGGCGACGTCGACATCCCCGGCGTGTACCGCATCCCCAAGGCCTCCATCCCGCAGGCGCTGCACGATCCCAACCACCTCTTCACCCGCCAGTTCGTCGCCAACGGCCGGAGCCTCACGAGCGCCGCCGGCATCCTCGTCAACACGTTCGACGCCTTGGAGCCGGAGGCCGTCGCGGCCCTGCAGCAGGGCAAGGTCGCCTCCGGCTTCCCGCCGGTGTTCGCCGTGGGGCCACTTCTCCCGGCGAGCAACCAGGCAAAAGATCCGCAGGCAAACTACATGGAGTGGCTCGACGCGCAGCCGGCGCGGTCGGTGGTGTACGTGAGCTTCGGCAGCCGCAAGGCCATCTCAGGGGAGCAGCTCAGGGAGCTCGCCGCCGGGCTGGAGACCAGCGGCCACAGGTTCCTGTGGGTGGTGAAGAGCACCGTCGTGGACAGGGACGACGCCGCCGAGCTCGGCGAGCTGCTCGGCGAGGGGTTCTTGAAGCGGGTGGAGAAGCGAGGCCTCGTCACCAAGGCATGGGTGGATCAGGAAGAGGTCCTGAAGCACGAGTCCGTGGCGCTGTTCGTGAGCCACTGCGGCTGGAACTCGGTGACGGAGGCGGCGGCGAGCGGCGTCCCGGTGCTGGCGCTGCCGAGGTTCGGCGACCAGCGGGTGAACTCCGGCGTGGTGGCGCGCGCCGGGCTCGGCGTGTGGGCGGACACCTGGAGCTGGGAGGGGGAAG-CCGGGGTGATCGGCGCAGAGGAGATATCGGAGAAGGTGAAGGCGGCGATGGCGGACGAGGCGTTGCGTAGGAAGGCGGCGAGCCTCGCCAAGGCCGCCGCGAAGGCCGTCGCCGGCGGTGGATCGAGCCACCGTTGTCTGGTCGAGTTCGCGCGGCTGTGCCAAGGGGGAACATGTCGCACTAATTGAGTACTGAGACATGGGTTCTAATTTAAATAATTCGGATGGAATCCTTGTTACAGATTTTAAATTGGAATAAGAAATGAAGCCATATGAAATTTGGAAGAATTTTAAATTTAATCAGTGGATAT]

[+] EMBL AK071127             [CACGCACACGGCACACCTACTCCCGCTTCACATCGCCAGGTGTTCGACCGAGGCCACCACCGGCAATGCCGAGCTCTGGCGACGCGGCGGGCAGGCGGCCGCGTGTGGTGCTCATCCCGAGCGCCGGCATGGGCCACCTCGTCCCCTTCGGCCGCCTCGCCGTGGCGCTCTCCTCCGGCCACGGCTGCGACGTCTCCCTCGTCACGGTGCTCCCCACGGTGTCCACCGCGGAGTCGAAGCACCTCGACGCGCTGTTCGACGCGTTCCCGGCGGTGCGGCGGCTCGACTTCGAGCTCGCGCCGTTCGACGCGTCGGAGTTCCCCAGCGCCGACCCGTTCTTCCTCCGGTTCGAGGCCATGCGGCGGTCGGCGCCGCTGCTCGGCCCGCTCCTCACCGGCGCCGGCGCATCGGCGCTCGCCACGGACATCGCGCTGACATCCGTCGTCATACCCGTGGCGAAGGAGCAGGGCCTCCCGTGCCACATCCTCTTCACCGCCTCCGCCGCGATGCTCTCCCTCTGCGCCTACTTCCCCACATACCTCGACGCCAACGCTGGCGACGGCGGCGGCGTCGGCGACGTCGACATCCCCGGCGTGTACCGCATCCCCAAGGCCTCCATCCCGCAGGCGCTGCACGATCCCAACCACCTCTTCACCCGCCAGTTCGTCGCCAACGGCCGGAGCCTCACGAGCGCCGCCGGCATCCTCGTCAACACGTTCGACGCCTTGGAGCCGGAGGCCGTCGCGGCCCTGCAGCAGGGCAAGGTCGCCTCCGGCTTCCCGCCGGTGTTCGCCGTGGGGCCACTTCTCCCGGCGAGCAACCAGGCAAAAGATCCGCAGGCAAACTACATGGAGTGGCTCGACGCGCAGCCGGCGCGGTCGGTGGTGTACGTGAGCTTCGGCAGCCGCAAGGCCATCTCAGGGGAGCAGCTCAGGGAGCTCGCCGCCGGGCTGGAGACCAGCGGCCACAGGTTCCTGTGGGTGGTGAAGAGCACCGTCGTGGACAGGGACGACGCCGCCGAGCTCGGCGAGCTGCTCGGCGAGGGGTTCTTGAAGCGGGTGGAGAAGCGAGGCCTCGTCACCAAGGCATGGGTGGATCAGGAAGAGGTCCTGAAGCACGAGTCCGTGGCGCTGTTCGTGAGCCACTGCGGCTGGAACTCGGTGACGGAGGCGGCGGCGAGCGGCGTCCCGGTGCTGGCGCTGCCGAGGTTCGGCGACCAGCGGGTGAACTCCGGCGTGGTGGCGCGCGCCGGGCTCGGCGTGTGGGCGGACACCTGGAGCTGGGAGGGGGAAG CCGGGGTGATCGGCGCAGAGGAGATATCGGAGAAGGTGAAGGCGGCGATGGCGGACGAGGCGTTGCGTAGGAAGGCGGCGAGCCTCGCCAAGGCCGCCGCGAAGGCCGTCGCCGGCGGTGGATCGAGCCACCGTTGTCTGGTCGAGTTCGCGCGGCTGTGCCAAGGGGGAACATGTCGCACTAATTGAGTACTGAGACATGGGTTCTAATTTAAATAATTCGGATGGAATCCTTGTTACAGATTTTAAATTGGAATAAGAAATGAAGCCATA                                      ]
[+] EMBL CF569127             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGGTGTTCGCCGTGGGGCCACTTCTCCCGGCGAGCAACCAGGCGAAAGATCCGCAGGCGAACTACATGGAGTGGCTCGACGCGCAGCCGGCGCGGTCGGTGGTGTACGTGAGCTTCGGCAGCCGGAAGGCCATCTCAGGGGAGCAGCTCAGGGAGCTCGCCGCCGGGCTGGAGGGCAGCGGCCACCGGTTCCTGTGGGTGGTGAAGAGCACCGTGGTGGACAGGGACGACGCCGCCGAGCTCGGCGAGCTGCTTGGCGAGGGGTTCTTGGAGCGGGTGGAGAAGCGAGGCCTCGTCACCAAGGCATGGGTGGATCAGGAAGAGGTCCTGAAGCACGAGTCCGTGGCGCTGTTCGTGAGCCACTGCGGGTGGAACTCGGTGACGGAGGCGGCGGCGAGCGGCGTCCCGGTGCTGGCGCTGCCGAGGTTCGGCGACCAGCGGGTGAACTCCGGCGTGGTGGCGCGCGCCGGGCTCGGCGTGTGGGCGGACACCTGGAGCTGGGAGGGGGAGGCCCGGGGTG                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB682805             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTTCCCCGTGGGGCCACTTCTCCCGGCGAGCAACCAGGCAAAAGATCCGCAGGCAAACTACATGGAGTGGCTCGACGCGCAGCCGGCGCGGTCGGTGGTGTACGTGAGCTTCGGCAGCCGCAAGGCCATCTCAGGGGAGCAGCTCAGGGAGCTCGCCGCCGGGCTGGAGACCAGCGGCCACAGGTTCCTGTGGGTGGTGAAGAGCACCGTCGTGGACAGGGACGACGCCGCCGAGCTCGGCGAGCTGCTCGGCGAGGGGTTCTTGAAGCGGGTGGAGAAGCGAGGCCTCGTCACCAAGGCATGGGTGGATCAGGAAGAGGTCCTGAAGCACGAGTCCGTGGCGCTGTTCGTGAGCCACTGCGGCTGGAACTCGGTGACGGAGGCGGCGGCGAGCGGCGTCCCGGTGCTGGCGCTGCCGAGGTTCGGCGACCAGCGGGTGAACTCCGGCGTGGTGGCGCGCGCCGGGCTCGGCGTGTGGGCGGACACCTGGAGCTGGGAGGGGGAAG CCGGGGTGATCGGCGCAGAGGAGATATCGGAGAAGGTGAAGGCGGCGATGGCGGACGAGGCGTTGCGTAGGAAGGCGGCGAGCCTCGCCAAGGCCGCCGCGAAGGCCGTCGCCGGCGGTGGATCGAGCCACCGTTGTCTGGTCGAGTTCGCGCGGCTGTGCCAAGGGGGAACATGTCGCACTAATTGAGTACTGAGACATGGGTTCTAATTTAAATAATTCGGATGGAATCCTTGTTACAGATTTTAAATTGGAATAAGAAAT                                               ]
[-] EMBL CB682806             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGCAGGCAAACTACATGGAGTGGCTTGACGCGCAGCCGGCGCGGTCGGTGGTGTACGTGAGCTTCGGCAGCCGCAAGGCCATCTCAGGGGAGCAGCTCAGGGAGCTCGCCGCCGGGCTGGAGACCAGCGGCCACAGGTTCCTGTGGGTGGTGAAGAGCACCGTCGTGGACAGGGACGACGCCGCCGAGCTCGGCGAGCTGCTCGGCGAGGGGTTCTTGAAGCGGGTGGAGAAGCGAGGCCTCGTCACCAAGGCATGGGTGGATCAGGAAGAGGTCCTGAAGCACGAGTCCGTGGCGCTGTTCGTGAGCCACTGCGGCTGGAACTCGGTGACGGAGGCGGCGGCGAGCGGCGTCCCGGTGCTGGCGCTGCCGAGGTTCGGCGACCAGCGGGTGAACTCCGGCGTGGTGGCGCGCGCCGGGCTCGGCGTGTGGGCGGACACCTGGAGCTGGGAGGGGGAAG CCGGGGTGATCGGCGCAGAGGAGATATCGGAGAAGGTGAAGGCGGCGATGGCGGACGAGGCGTTGCGTAGGAAGGCGGCGAGCCTCGCCAAGGCCGCCGCGAAGGCCGTCGCCGGCGGTGGATCGAGCCACCGTTGTCTGGTCGAGTTCGCGCGGCTGTGCCAAGGGGGAACATGTCGCACTAATTGAGTACTGAGACATGGGTTTTAATTTAAATAATTCGGATGGAATCCTTGTTACAGATTTTAAATTGGAATAAGAAATGAAGCCATATGAAATTTGGAAGAATTTTAAATTTAATCAGTGGATAT]


>consensus_8721#1 CACGCACACGGCACACCTACTCCCGCTTCACATCGCCAGGTGTTCGACCGAGGCCACCAC CGGCAATGCCGAGCTCTGGCGACGCGGCGGGCAGGCGGCCGCGTGTGGTGCTCATCCCGA GCGCCGGCATGGGCCACCTCGTCCCCTTCGGCCGCCTCGCCGTGGCGCTCTCCTCCGGCC ACGGCTGCGACGTCTCCCTCGTCACGGTGCTCCCCACGGTGTCCACCGCGGAGTCGAAGC ACCTCGACGCGCTGTTCGACGCGTTCCCGGCGGTGCGGCGGCTCGACTTCGAGCTCGCGC CGTTCGACGCGTCGGAGTTCCCCAGCGCCGACCCGTTCTTCCTCCGGTTCGAGGCCATGC GGCGGTCGGCGCCGCTGCTCGGCCCGCTCCTCACCGGCGCCGGCGCATCGGCGCTCGCCA CGGACATCGCGCTGACATCCGTCGTCATACCCGTGGCGAAGGAGCAGGGCCTCCCGTGCC ACATCCTCTTCACCGCCTCCGCCGCGATGCTCTCCCTCTGCGCCTACTTCCCCACATACC TCGACGCCAACGCTGGCGACGGCGGCGGCGTCGGCGACGTCGACATCCCCGGCGTGTACC GCATCCCCAAGGCCTCCATCCCGCAGGCGCTGCACGATCCCAACCACCTCTTCACCCGCC AGTTCGTCGCCAACGGCCGGAGCCTCACGAGCGCCGCCGGCATCCTCGTCAACACGTTCG ACGCCTTGGAGCCGGAGGCCGTCGCGGCCCTGCAGCAGGGCAAGGTCGCCTCCGGCTTCC CGCCGGTGTTCGCCGTGGGGCCACTTCTCCCGGCGAGCAACCAGGCAAAAGATCCGCAGG CAAACTACATGGAGTGGCTCGACGCGCAGCCGGCGCGGTCGGTGGTGTACGTGAGCTTCG GCAGCCGCAAGGCCATCTCAGGGGAGCAGCTCAGGGAGCTCGCCGCCGGGCTGGAGACCA GCGGCCACAGGTTCCTGTGGGTGGTGAAGAGCACCGTCGTGGACAGGGACGACGCCGCCG AGCTCGGCGAGCTGCTCGGCGAGGGGTTCTTGAAGCGGGTGGAGAAGCGAGGCCTCGTCA CCAAGGCATGGGTGGATCAGGAAGAGGTCCTGAAGCACGAGTCCGTGGCGCTGTTCGTGA GCCACTGCGGCTGGAACTCGGTGACGGAGGCGGCGGCGAGCGGCGTCCCGGTGCTGGCGC TGCCGAGGTTCGGCGACCAGCGGGTGAACTCCGGCGTGGTGGCGCGCGCCGGGCTCGGCG TGTGGGCGGACACCTGGAGCTGGGAGGGGGAAGCCGGGGTGATCGGCGCAGAGGAGATAT CGGAGAAGGTGAAGGCGGCGATGGCGGACGAGGCGTTGCGTAGGAAGGCGGCGAGCCTCG CCAAGGCCGCCGCGAAGGCCGTCGCCGGCGGTGGATCGAGCCACCGTTGTCTGGTCGAGT TCGCGCGGCTGTGCCAAGGGGGAACATGTCGCACTAATTGAGTACTGAGACATGGGTTCT AATTTAAATAATTCGGATGGAATCCTTGTTACAGATTTTAAATTGGAATAAGAAATGAAG CCATATGAAATTTGGAAGAATTTTAAATTTAATCAGTGGATAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8721#0      CACTACGCATCAAACAACAGCCGAACTGTTGAGTCCCAAGAAGTCAAGAACCCAAGGTGT 60
consensus_8721#1      -----------------CACGCACACGGCACACCTACTCCCGCTTCACATCGCCAGGTGT 43
                                       **  *  ** *   *    *      *  * * * * ******

consensus_8721#0      TCGACC-ATGTGTTCGGCGGCAACACCCAACTCCGGCGACGTCCGTGCTACCCCAGGATC 119
consensus_8721#1      TCGACCGAGGCCACCACCGGCAATGCCGAGCTCTGGCGACG-----------CGGCGGGC 92
                      ****** * *    *  ******  ** * *** *******           *   *  *

consensus_8721#0      ATCGCGGCCGCACGTCGTCCTCCTACCAAGCGCCGGCATGGGCCACCTGGTTCCCTTCAC 179
consensus_8721#1      AG-GCGGCCGCGTGTGGTGCTCATCCCGAGCGCCGGCATGGGCCACCTCGTCCCCTTCGG 151
                      *  ********  ** ** *** * ** ******************** ** ******  

consensus_8721#0      CCGCCTCGCCGCCGCGCTGTGCTCCGGCCATGGCTGCGACGTGTCCCTCGTCGCGGCCGT 239
consensus_8721#1      CCGCCTCGCCGTGGCGCTCTCCTCCGGCCACGGCTGCGACGTCTCCCTCGTCACGGTGCT 211
                      ***********  ***** * ********* *********** ********* ***   *

consensus_8721#0      GCCCACCGTGTCGTCGGCCGAGGCACGCCACCTCGCCGCGCACTTCACCGCGTTCCCCGC 299
consensus_8721#1      CCCCACGGTGTCCACCGCGGAGTCGAAGCACCTCGACGCGCTGTTCGACGCGTTCCCGGC 271
                       ***** *****  * ** *** *    ******* *****  ***  ********* **

consensus_8721#0      CGTTCGACGGCTCGAGCTCGACCTCGCGTCCCTCGACGTGTCCGAGTTCGCCGGCGCCGA 359
consensus_8721#1      GGTGCGGCGGCTCGACTTCGAGCTCGCGCCGTTCGACGCGTCGGAGTTCCCCAGCGCCGA 331
                       ** ** ********  **** ****** *  ****** *** ****** ** *******

consensus_8721#0      CCCGTTCTACGTCCGTTACGAGGCCATCCGCCGGTCGGCGTCGCTCCTGGCGCCGCTCCT 419
consensus_8721#1      CCCGTTCTTCCTCCGGTTCGAGGCCATGCGGCGGTCGGCGCCGCTGCTCGGCCCGCTCCT 391
                      ******** * **** * ********* ** ********* **** ** *  ********

consensus_8721#0      CGCCGGCGGCGCGTCGGCGGCGGCGTCGGCGCTGGTCGCTGACATCGCCTTGGCCTCCGT 479
consensus_8721#1      CACCGGCG-----CCGGCG----CATCGGCGCTCGCCACGGACATCGCGCTGACATCCGT 442
                      * ******      *****    * ******** * * * ********  ** * *****

consensus_8721#0      TGTGATACCGGTGGCCAAGGACCTCCGCCTCCCGTGCTACGTCTTCTTCACCGCCTCCGC 539
consensus_8721#1      CGTCATACCCGTGGCGAAGGAGCAGGGCCTCCCGTGCCACATCCTCTTCACCGCCTCCGC 502
                       ** ***** ***** ***** *   *********** ** ** ****************

consensus_8721#0      CACGATGTTCTCCTTCCTCGCCTACCTGCCCACCTACCTCAACGCCAACGCCGGCGGCGG 599
consensus_8721#1      CGCGATGCTCTCCCTCTGCGCCTACTTCCCCACATACCTCGACGCCAACGCTGGCGACGG 562
                      * ***** ***** **  ******* * ***** ****** ********** **** ***

consensus_8721#0      GCACGCCATCGGCGACGTCGACGTCCCCGGCGTGTGCCGCGTTCCGACGTCATCCGTCCC 659
consensus_8721#1      CGGCGGCGTCGGCGACGTCGACATCCCCGGCGTGTACCGCATCCCCAAGGCCTCCATCCC 622
                         ** * ************** ************ **** * ** * * * *** ****

consensus_8721#0      GCAGGCGCTGCACGACCCGGACGACATCTTCACCCGGCAGTTCATCGCGAACGCTCGCAG 719
consensus_8721#1      GCAGGCGCTGCACGATCCCAACCACCTCTTCACCCGCCAGTTCGTCGCCAACGGCCGGAG 682
                      *************** **  ** ** ********** ****** **** ****  ** **

consensus_8721#0      CCTCGCGAACGCAGACGGCCTCGTCGTCAACGCGTTCGACGCCCTGGAGCCGGAGGCCGT 779
consensus_8721#1      CCTCACGAGCGCCGCCGGCATCCTCGTCAACACGTTCGACGCCTTGGAGCCGGAGGCCGT 742
                      **** *** *** * **** ** ******** *********** ****************

consensus_8721#0      CGCGGCGTTGCGGCAGGGAACCGTCGCCGCCGGGTTACCGCCGGTGTTCGCCGTTGGGCC 839
consensus_8721#1      CGCGGCCCTGCAGCAGGGCAAGGTCGCCTCCGGCTTCCCGCCGGTGTTCGCCGTGGGGCC 802
                      ******  *** ****** *  ****** **** ** ***************** *****

consensus_8721#0      ACTCAGCCCGGCGCCCATTCCGGCGAAAGATTC--AGGCAG-CTACTTGCCGTGGCTCGA 896
consensus_8721#1      ACTTCTCCCGGCGAGCAACCAGGCAAAAGATCCGCAGGCAAACTACATGGAGTGGCTCGA 862
                      ***   *******  **  * *** ****** *  *****  **** **  *********

consensus_8721#0      CGCGCAGCCGGCGCGGTCGGTGGTTTACGTCAGCTTCGGCAGCCGCAAGGCGTTGCCAAG 956
consensus_8721#1      CGCGCAGCCGGCGCGGTCGGTGGTGTACGTGAGCTTCGGCAGCCGCAAGGCCATCTCAGG 922
                      ************************ ***** ********************  *  ** *

consensus_8721#0      AGACCAGCTGAGCGAGCTCGCCGCCGGGCTAGAAGCAAGCGGCCACCGTTTCTTGTGGGT 1016
consensus_8721#1      GGAGCAGCTCAGGGAGCTCGCCGCCGGGCTGGAGACCAGCGGCCACAGGTTCCTGTGGGT 982
                       ** ***** ** ***************** **  * ********* * *** *******

consensus_8721#0      GGTGAAGGGCGCCGTCGTGGACAGAGACGACGCCGGCGAGCTCACCGACCTGCTCGGAGA 1076
consensus_8721#1      GGTGAAGAGCACCGTCGTGGACAGGGACGACGCCGCCGAGCTCGGCGAGCTGCTCGGCGA 1042
                      ******* ** ************* ********** *******  *** ******** **

consensus_8721#0      AGCCTTCCTGCAGAGAATCCATGGCCGTGGCCTCGTGACCATGGCGTGGGTGCGTCAAGA 1136
consensus_8721#1      GGGGTTCTTGAAGCGGGTGGAGAAGCGAGGCCTCGTCACCAAGGCATGGGTGGATCAGGA 1102
                       *  *** ** ** *  *  *    ** ******** **** *** ******  *** **

consensus_8721#0      GGAGGTCCTGAACCACCCCTCCGTCGGTCTGTTCATCAGCCACTGCGGGTGGAGCTCGGT 1196
consensus_8721#1      AGAGGTCCTGAAGCACGAGTCCGTGGCGCTGTTCGTGAGCCACTGCGGCTGGAACTCGGT 1162
                       *********** ***   ***** *  ****** * *********** **** ******

consensus_8721#0      GACGGAGGCGGCGGCGAGCGGCGTGCCGGTGGTGGCGTGGCCGAGGTTCGCCGACCAGCG 1256
consensus_8721#1      GACGGAGGCGGCGGCGAGCGGCGTCCCGGTGCTGGCGCTGCCGAGGTTCGGCGACCAGCG 1222
                      ************************ ****** *****  *********** *********

consensus_8721#0      GGTGAACGCCGGCGTGGTGGCGCGCGCGGGGATCGGCGTGTGGGTGGACACCTGGAGCTG 1316
consensus_8721#1      GGTGAACTCCGGCGTGGTGGCGCGCGCCGGGCTCGGCGTGTGGGCGGACACCTGGAGCTG 1282
                      ******* ******************* *** ************ ***************

consensus_8721#0      GGAGGGGGAGGATGATGGGGTGGTGAGCGCGGAGGACATCGCCGGGAAGGTGAGGTCGGC 1376
consensus_8721#1      GGAGGGGGAAGC---CGGGGTGATCGGCGCAGAGGAGATATCGGAGAAGGTGAAGGCGGC 1339
                      ********* *     ****** *  **** ***** **  * * ******** * ****

consensus_8721#0      GATGGCCGACGAGGGTGTAAGGAAGGCGGCGGCGAGCGTCCGTGAGGCCGCGGCGAGGGC 1436
consensus_8721#1      GATGGCGGACGAGGCGTTGCGTAGGAAGGCGGCGAGCCTCGCCAAGGCCGCCGCGAAGGC 1399
                      ****** *******   *  * * *  ********** **    ******* **** ***

consensus_8721#0      GGTGGCCGCCGGAGGGAGCAGCTACCGGAGCTTGGCGGAGTTGGTGCGACGGTGCCGTGA 1496
consensus_8721#1      CGTCGCCGGCGGTGGATCGAGCCACCGTTGTCTGGTCGAGTTCGCGCGGCTGTGCCAAGG 1459
                       ** **** *** **    *** ****  *  ***  ***** * *** * *****  * 

consensus_8721#0      TGGG-CTTGTCATCACGAACGGAATGTGAGAGAAGCGAGGAGAAGACGGAATGGGCAAAC 1555
consensus_8721#1      GGGAACATGTCG-CACTAATTGAGTACT-GAGACATGGGTTCTAATTTAAATAA------ 1511
                       **  * ****  *** **  ** *    ****   * *    *     ***        

consensus_8721#0      GTCCAAACGAAATGGCAGCATCTTCAAGCATTGTCAGTCAGTCACCACAGTCCACAGGTG 1615
consensus_8721#1      -TTCGGATGGAAT-----CCTTGTTACAGATTTTAAATTGGAATAAGAAAT---GAAGCC 1562
                       * *  * * ***     * *  * *   *** * * *  *       * *    * *  

consensus_8721#0      GTAGGCTCACATCATAAAAAACCTTTTTGTTCCATGATAAGCACACATGCACGAGATGTC 1675
consensus_8721#1      ATATG---AAATT-TGGAAGAATTTTAAATT---TAATCAGTGGATAT------------ 1603
                       ** *   * **  *  ** *  ***   **   * ** **   * **            

consensus_8721#0      ACCAACAATTTCAACCAAAATTATCAACCCAAATAGTAT 1714
consensus_8721#1      ---------------------------------------
                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)