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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8766#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1006 fasta sequence
[ACTAATCCATCCTGTAGCTTCTAATCAAACTGAGAGGGAGAGAGATCAGAGAGAGCGCATATAAATACAATGAGCAGGTCGAGCATGGCCGCTGTCTTCCTGGTGGTGTTGATAGCCATCAACGTCGTCTGCTTATCCCCACAAGGTGCAACTGCAGCGCCAGAGGGGGAACTTCATAAACTCAACCTTGAGCTGCCACCGCCGTTGCCGCCTGGGAAGGAACCCTCAACGGAGGCGTACCGGTTCACCCAACAAGTCTGCGATTTTGGAACTAGCACCTTCACGGAACAGATGATCGGTGCCCGCTGCTACGATGTACTCATCCCGTATGGCGAGTCATTCAAGGGCAACCAAGTGAAGGCCACTCAGGTGGCCACCATCATCTTAGTCACCAAGATCCAAGCCCTCACTAGTGAGGCGTACGCGATAAGAGACATGGGCATCAGGGACGAAAACATCAATAACTGCGGGTCTTTCTTTGCCATTGGCGAAACCTTTTCGGACACCACCAACTCGACGCTATACGCGCTCGAGCGCCTCACTGCCGCCGGAGAAGGTAAACGCAGTAAGGAGGACCTGGAAACTGTGCACAAGTGGACCAAGAATTTGGAGACCCAATACGATGAGACCGCGAGCAAGTGCAAGTTAGGTGATCTGTT-CAAGTACGGTGACAAGAAGGTTCCCACCGTTTGGGTCATAGACCTGCTCACGACCACAGCCATCCGCCTCCTCAATGCCATAAAGCCATGATTGATCGATCGATCATCCCTTCAATCTTAGCTATATATACCTTCCACTAAATTTTTTTTATTTATATTTTGGATAATTCCCATGATATATATGTAATAAGTGCGTGATGCGCATGGATATCGCATGCATGCTGCATTTGTAACATTGTTATCAATATTTGAAAATATTTTTTTCAATATTGTAATTACTAGCAAAGTGTGTCGATGTGTTGTAACGGACCGAAAAACCAAAATGCAATAATGGTTAAGCTGACAAA]
[+] EMBL AK070815 [ACTAATCCATCCTGTAGCTTCTAATCAAACTGAGAGGGAGAGAGATCAGAGAGAGCGCATATAAATACAATGAGCAGGTCGAGCATGGCCGCTGTCTTCCTGGTGGTGTTGATAGCCATCAACGTCGTCTGCTTATCCCCACAAGGTGCAACTGCAGCGCCAGAGGGGGAACTTCATAAACTCAACCTTGAGCTGCCACCGCCGTTGCCGCCTGGGAAGGAACCCTCAACGGAGGCGTACCGGTTCACCCAACAAGTCTGCGGTTTTGGAACTAGCACCTTCACGGAACAGATGATCGGTGCCCGCTGCTACGATGTACTCATCCCGTATGGCGAGTCATTCAAGGGCAACCAAGTGAAGGCCACTCAGGTGGCCACCATCATCTTAGTCACCAAGATCCAAGCCCTCACTAGTGAGGCGTACGCGATAAGAGACATGGGCATCAGGGACGAAAACATCAATAACTGCGGGTCTTTCTTTGCCATTGGCGAAACCTTTTCGGACACCACCAACTCGACGCTATACGCGCTCGAGCGCCTCACTGCCGCCGGAGAAGGTAAACGCAGTAAGGAGGACCTGGAAACTGTGCACAAGTGGACCAAGAATTTGGAGACCCAATACGATGAGACCGCGAGCAAGTGCAAGTTAGGTGATCTGTT CAAGTACGGTGACAAGAAGGTTCCCACCGTTTGGGTCATAGACCTGCTCACGACCACAGCCATCCGCCTCCTCAATGCCATAAAGCCATGATTGATCGATCGATCATCCCTTCAATCTTAGCTATATATACCTTCCACTAAATTTTTTTTATTTATATTTTGGATAATTCCCATGATATATATGTAATAAGTGCGTGATGCGCATGGATATCGCATGCATGCTGCATTTGTAACATTGTTATCAATATTTGAAAATATTTTTTTCAATATTGTAATTACTAGCAAAGTGTGTCGATGTGTTGTAACGGACCGAAAAACCAAAATGCAATAATGGTTAAGCTGAC ]
[+] EMBL C73246 [ CTTCTAATCAAACTNAGAGGGAGANAGATCAGAGAGAGCGCATATAAATACAATGAGCAGGTCGAGCATGGCCGCTGTNTTCCTGGTGGTGTTGATAGCCATCAACGTCGTCTGCTTATCCCCACAAGGTGCAACTGCAGCGCCAGAGGGGGAACTTCATAAACTCAACCTTGAGCTGCCACCGCCGTTGCCGCCTGGAAAGGAACCCTCAACGGAGGCGTACCGGTTCACCCAACAAGTCTGCNATTTTGGAACTAGCACCTTCACGGAACANATGATCGGTGCCCGCTGCTACGATGTACTCATCCCGTATGGCGAGTCATTCAAGGGCAACCAAGTTAAGGCCACTCAGGTGGCCACCATCATCTTAGTCACCAAGATCCAAGCCCTCATTAGTTAGGCGT ]
[+] EMBL AU162212 [ GGAGAGAG TCAGAGAGAGCGCATATAAATACAATGAGCAGGTCGAGCATGGCCG TGTCTTCCTGGTGGTGTTGATAGCCATCAACGTCGTCTGCTTATCCCCACAAGGTGCAACTGCAGCGCCAGAGGGGGAACTTCATAAACTCAACCTTGAGCTGCCACCGCCGTTGCCGCCTGGGAAGGAACCCTCAACGGAGGCGTACCGGTTCACCCAACAAGTCTGCGATTTTGGAACTAACACCTTCACGGAACA ATGATCGGTG CCG TGCTACG TGTACTCATCCCCNATGGCGAANCATTCAAGGGCAACCAAGTTAAAGGCACTCAAGTGGGCACC ]
[+] EMBL AU094164 [ cCCAAGTGAAGGCCACTCAGGTGNCCACCATCATCTTAGTCACCAAGATCCAAGCCCTCACTAGTGAGGCGTACGCGATAAGAGACATGGGCATCAGGGACGAAAACATCAATAACTGCGGGTCTTTCTTTGCCATTGGCGAAACCTTTTCGGACACCACCAACTCGACGCTATACGCGCTCGAGCGCCTCACTGCCGCCGGAGAAGGTAAACGCAGTAAGGAGGACCTGGAAACTGTGCACAAGTGGACCAAGAATTTGGAGACCCAATACGATGAGACCGCGAGCAAGTGCAAGTTAGGTGATCTGTT CAAGTACGGTGACAAGAAGGTTCCCACCGTTTGGGTCATAGACCTGCTCACGACCACAGCCATCCGCCTCCTCAATGCCATAAAGCCATGATTGATCGATCGATCATCCCTTCAATCTTAGCTATATATACCTTCCACTAAATTTTTTTTATTTATATTTTGGATAATTCCCATGATATATATGTAATAAGTGCGTGATGCGCATGGATATCGCATGCATGCTGCATTTGTAACATTGTTATCAATATTTGAAAATATTTTTTTCAAaaaaa ]
[+] EMBL C99122 [ GCCAGTTAGGTGATCTGTTCCAAGTACGGTGACAAGAAGTTCCCCACCGTTTGGGTCATAGACCTGCTCACGACCACAGCCACCCGCCTCCTCAATGCCATAAAGCCATGATTGATCGATCGATCATCCCTTCAATCTTAGCTATATATACCTTCCACTAAATTTTTTTTATTTATATTTTGGATAATTCCCATGATATATATGTAATAAGTGCGTGATGCGCATGGATATCGCATGCATGCTGCATTTGTAACATTGTTATCAATATTTGAAAATATTTTTTTCAATATTGTAATTACTAGCAAAGTGTGTCGATGTGTTGTAACGGACCGAAAAACCAAAATGCAATAATGGTTAAGCTGAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||