These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8787#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1169 fasta sequence [ATCGAACCATTGCCGTCATATGGGAGAGGGCGTGAGCTTCCCGGTGGAAGATACATGAGTTTGATCCATGGCAATGGCCTTCAGGATGTTGTCATTACAGGCGATAATGGAACTATCGATGGCCAAGGCAGTGCGTGGTGGGACATGTGGAAGAAGGGCACACTACCCTTCACTAGGCCTCACTTACTCGAGCTGATGAACTCTTCTGATGTTGTCGTCTCCAATGTGGTCTTCCAGGATTCGCCGTTTTGGAACATCCATCCTGTTTACTGCAGCAATGTGGTGATAAGAAATGTGACCGTACTAGCTCCACATGACTCACCCAACACTGATGGAATTGATCCAGATTCCAGCAGCAACGTCTGCATCGAGGACTGCTACATCTCGACAGGAGATGATCTGATCGCCATCAAGAGTGGCTGGGACGAGTACGGCATGGCCTACGGGCGCCCCAGCTCGCACATCACCATCCGCCGGATCACCGGCTCCTCCCCCTTCGCCGGCTTCGCTGTCGGGAGCGAGACGTCCGGCGGCGTGGAGCACGTCCTCGCGGAGCACCTCAACTTCTTCAGCTCGGGGTTCGGCATCCACATCAAGACCAACACCGGCAGGGGAGGGTTCATCCGGAACGTCACCGTCTCCGACGTGACG-CTGGACTCCGTCCGCTACGGCCTGAGGATCGCCGGCGATGTCGGCGGGCACCCCGACGACCGCTACGACCGGAACGCGCTCCCCGTCGTGGACGGCCTGACGATCAAGAACGTCCAGGGCCAGAACATCAGGGAGGCAGGGTCGATCAAGGGGATCGCGACGTCGG-CCTTCTCCAGGATCT-GCCTGTCCAACGTGAAGCTCA-ACGGCGGCGCGGCGGTCCGGCCGTGGAAGTGCGAGGCCGTCAGCGGGGCGGCGCTCGACGTGCAGCCGTCGCCGTGCACGGAGCTGACCAGCACGTCCGGGATGAGCTTCTGTACAAATTCGCTGTGAACTGAAACTGTCAAGCGTGCATGTTCA-GGGGC-CAAGTTGTTCTATAATTATCA-AGGCGGTTTTTTTCTATCGATGAGGCAATGAGCGTGTTATGTTGGTAA-CGCCCATCAAAGATATGCTAAACATTTAATCATTCGTCAGAGTATATGAGTAATTCTCCGGAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK058453 [ATCGAACCATTGCCGTCATATGGGAGAGGGCGTGAGCTTCCCGGTGGAAGATACATGAGTTTGATCCATGGCAATGGCCTTCAGGATGTTGTCATTACAGGCGATAATGGAACTATCGATGGCCAAGGCAGTGCGTGGTGGGACATGTGGAAGAAGGGCACACTACCCTTCACTAGGCCTCACTTACTCGAGCTGATGAACTCTTCTGATGTTGTCGTCTCCAATGTGGTCTTCCAGGATTCGCCGTTTTGGAACATCCATCCTGTTTACTGCAGCAATGTGGTGATAAGAAATGTGACCGTACTAGCTCCACATGACTCACCCAACACTGATGGAATTGATCCAGATTCCAGCAGCAACGTCTGCATCGAGGACTGCTACATCTCGACAGGAGATGATCTGATCGCCATCAAGAGTGGCTGGGACGAGTACGGCATGGCCTACGGGCGCCCCAGCTCGCACATCACCATCCGCCGGATCACCGGCTCCTCCCCCTTCGCCGGCTTCGCTGTCGGGAGCGAGACGTCCGGCGGCGTGGAGCACGTCCTCGCGGAGCACCTCAACTTCTTCAGCTCGGGGTTCGGCATCCACATCAAGACCAACACCGGCAGGGGAGGGTTCATCCGGAACGTCACCGTCTCCGACGTGACG CTGGACTCCGTCCGCTACGGCCTGAGGATCGCCGGCGATGTCGGCGGGCACCCCGACGACCGCTACGACCGGAACGCGCTCCCCGTCGTGGACGGCCTGACGATCAAGAACGTCCAGGGCCAGAACATCAGGGAGGCAGGGTCGATCAAGGGGATCGCGACGTCGG CCTTCTCCAGGATCT GCCTGTCCAACGTGAAGCTCA ACGGCGGCGCGGCGGTCCGGCCGTGGAAGTGCGAGGCCGTCAGCGGGGCGGCGCTCGACGTGCAGCCGTCGCCGTGCACGGAGCTGACCAGCACGTCCGGGATGAGCTTCTGTGCAAATTCGCTGTGAACTGAAACTGTCAAGCGTGCATGTTCA GGGGC CAAGTTGTTCTATAATTATCA AGGCGGTTTTTTTCTATCGATGAGGCAATGAGCGTGTTATGTTGGTAA CGCCCATCAAAGATATGCTAAACATTTAATCATTCGTCAGAGTATATGAG ] [+] EMBL AK099329 [ TTCTGATGTTGTCGTCTCCAATGTGGTCTTCCAGGATTCGCCGTTTTGGAACATCCATCCTGTTTACTGCAGCAATGTGGTGATAAGAAATGTGACCGTACTAGCTCCACATGACTCACCCAACACTGATGGAATTGATCCAGATTCCAGCAGCAACGTCTGCATCGAGGACTGCTACATCTCGACAGGAGATGATCTGATCGCCATCAAGAGTGGCTGGGACGAGTACGGCATGGCCTACGGGCGCCCCAGCTCGCACATCACCATCCGCCGGATCACCGGCTCCTCCCCCTTCGCCGGCTTCGCTGTCGGGAGCGAGACGTCCGGCGGCGTGGAGCACGTCCTCGCGGAGCACCTCAACTTCTTCAGCTCGGGGTTCGGCATCCACATCAAGACCAACACCGGCAGGGGAGGGTTCATCCGGAACGTCACCGTCTCCGACGTGACG CTGGACTCCGTCCGCTACGGCCTGAGGATCGCCGGCGATGTCGGCGGGCACCCCGACGACCGCTACGACCGGAACGCGCTCCCCGTCGTGGACGGCCTGACGATCAAGAACGTCCAGGGCCAGAACATCAGGGAGGCAGGGTCGATCAAGGGGATCGCGACGTCGG CCTTCTCCAGGATCT GCCTGTCCAACGTGAAGCTCA ACGGCGGCGCGGCGGTCCGGCCGTGGAAGTGCGAGGCCGTCAGCGGGGCGGCGCTCGACGTGCAGCCGTCGCCGTGCACGGAGCTGACCAGCACGTCCGGGATGAGCTTCTGTACAAATTCGCTGTGAACTGAAACTGTCAAGCGTGCATGTTCA GGGGC CAAGTTGTTCTATAATTATCA AGGCGGTTTTTTTCTATCGATGAGGCAATGAGCGTGTTATGTTGGTAA CGCCCATCAAAGATATGCTAAACATTTAATCATTCGTCAGAGTATATGAGT ] [+] EMBL BI809309 [ TCTCCGACGTGACGTCTGGACTCCGTCCGCTAC GCCTGAGGATCACCGGCGATGTCGGCGGGCACCCCGACGACCGCTACGACCGGAACGCGCTCCCC TCGTGGACGGCCTGACGATCAAGAACGTCCAGGGCCAGAACATCAGGGAGGCAGGGTCATTCAAGGGGATCGCGAC TCGGCCCTTCTCCAGGATCT GCCTGTCCAACGTGAAGCTCA ACGGCGGC C GCGGTCC GCCGTGGAAGTGCGA GCCGTCAGC GGGCGGCGCTCGACGTGCA CCGTC CCGTGCACGGAGCTGACCAGCACGTCCGGGATGAGCTTCTGTACAAATTCGCTATGAACTGAAACTGTCAAGCGTGCATGTTCA GGGGCACAAGTTGTTCTATAATTATCA AGGCGGTTTTTTTCTATCGATGAGGCAATGAGCGTGTTATGTTGGTAA CGCCCATCAAAGATATGCTAAACATTTAATCATTCGTCAGAGTATATGAGTAATTCTCCGGAAAAAAAAAA ] [+] EMBL BI809426 [ acgGGCCCTGAACATCAGGGAGTCCGGGTCATTCAAGGGGATCGCGACGTCGG CCTTCTCCCGGATCTCGCCTGTCCCACGTGAAGCTCACACGGCGGCGCGGCGGTCC GCCGTGGAAGTGCGA GCCGTCA C GGGCGGCGCTCGACGT CA CCGTCGCCGTGCACGGAGCTGACCAGCACGTCCGGGATGAGCTTCTGTACAAATTCGCTATGAACTGAAACTGTCAAGCGTGCATGTTCACGGGGC CCAGTTGTTCTATAATTATCACAGGCGGTTTTTTTCTATCGATGAGGCCATGAGCGTGTTATGTTGGTAA CGCCCATCCAAGATATGCTAAACATTTAATCATTCGTCCGAGTATATGAGTAATTCTCCGGAAAAAAAAAA ] [+] EMBL AU172834 [ AACGTNAAGCTCA ACGGCGGCGCGGCGGTCCGGCCGTGGAAGTGCGAGGCCGTCANCGGGGCGGCGCTCGACGTGCANCCGTCGCCGTGCACGGANCTGACCAGCACGTCCGGGATGAGCTTNTGNACAAATTCGCTGTGAACTGAAACTGTCAAGCGNGCATGTTCA GGGGC CAAGTTGTTNTATAATTATCA AGGCGGTTTTTTTCTATCNATNAGGCAATGAGCGTGTTATGTTGGTAACCGCCCNTCAAANATATGCTAAACATTTAATCATTNGTCAGAGTATATGAGTAATTNTCCGGAAAAAAAAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||