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Oryza sativa
cluster # 8791 cluster # 8791       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8791#0 length = 1327 sequences # 5  

consensusID : consensus_8791#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1327
fasta sequence
                              [GCATCCCTCTCCTCTCGTCCTGTGAGTTGCCCAAGACGAATCGCTTTGCTCACAATGGCTGGAGCTCGGTTGTCTCTCGCGTTCCTGTGCTTTGTGGTGGTGGTGGTGGCCTCCGCGCTCGCCGGCGGCGCCGGTGCGAGGAAGACGGTCGGCGAGTACGTGCTCAGGAAGGGGGACTTCTCCGTGAAGATCACCAACTGGGGAGCAACCATGATGTCGGTCGTCCTCCCTGATTCCAAAGGGAATTTGGCTGATGTTGTGCTTGGCCTAGACACCATTGCTGAGTACGTGAACGACACTAATTACTTCGGGCCGGTTACCGGACGGGTCGGGCAGAGGATAGCCAGGGGGCGGTTCGTTCTCGACGGGAAGGTGTATCACACGTACATCAACGACGGCAGGAACGCGATTCACGGTGGACACAGAGGGTTCAGCAAAGTCATATGGACGGTGAAGGAGTACGTCGGCGGCGGCGACTCGCCGTACATCACCTTGTACTACCGCAGCTTCGACGGAGAGCAAGGTTTCCCCGGGGACCTGGACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCGACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGCGGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACCCCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCCTACGACTTCCGGCACCCCACCCCGATCGGCGCGCGCATCCGGCAGGTGATGGGCGGGCGCATCGCCGGGTACGACATCAACTACGTGATCGACGGCGAGGGCATGCGGAAGGTGGCCGCGGCGCGGGACGGCGCGTCGGGCCGCGCGCTGGAGCTGTGGGCGAACCAGCCGGCCATGCAGCTGTACACCGGCAACTGGCTGAACAACATCAAGGGCAAGGGCGGCAAGGTGTACCAGCAGTACGGCGGGTTCTGCCTGGAGACGCAGGGGTACGTGGACGCCGTGAACCACCCGGAGTTCCCCTCCATGACGGTCAGGCCCGGCCAGGTGTACAGGCACGACATGGCCTTCAAGTTCTCCTTCTAGCTCTCTAGCTGATCAGTCAGGATGATCGTGTGGTTGTAGTATACCATTTTTCAAGATTGTGCGAATAATTATTGGCGTGTTGTTGAAATAATTGAAGAATGGGGTCGTTCTCAAGCATGCGCTCCATGAACAATTATGTTTGCGGCAAGCTATCATGTTCATGAGCAGATATGTACACGTC]

[+] EMBL AK106058             [GCATCCCTCTCCTCTCGTCCTGTGAGTTGCCCAAGACGAATCGCTTTGCTCACAATGGCTGGAGCTCGGTTGTCTCTCGCGTTCCTGTGCTTTGTGGTGGTGGTGGTGGCCTCCGCGCTCGCCGGCGGCGCCGGTGCGAGGAAGACGGTCGGCGAGTACGTGCTCAGGAAGGGGGACTTCTCCGTGAAGATCACCAACTGGGGAGCAACCATGATGTCGGTCGTCCTCCCTGATTCCAAAGGGAATTTGGCTGATGTTGTGCTTGGCCTAGACACCATTGCTGAGTAC   AACGACACTAATTACTTCGGGCCGGTTACCGGACGGGTCGGGCAGAGGATAGCCAGGGGGCGGTTCGTTCTCGACGGGAAGGTGTATCACACGTACATCAACGACGGCAGGAACGCGATTCACGGTGGACACAGAGGGTTCAGCAAAGTCATATGGACGGTGAAGGAGTACGTCGGCGGCGGCGACTCGCCGTACATCACCTTGTACTACCGCAGCTTCGACGGAGAGCAAGGTTTCCCCGGGGACCTGGACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCGACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGCGGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACCCCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCCTACGACTTCCGGCACCCCACCCCGATCGGCGCGCGCATCCGGCAGGTGATGGGCGGGCGCATCGCCGGGTACGACATCAACTACGTGATCGACGGCGAGGGCATGCGGAAGGTGGCCGCGGCGCGGGACGGCGCGTCGGGCCGCGCGCTGGAGCTGTGGGCGAACCAGCCGGCCATGCAGCTGTACACCGGCAACTGGCTGAACAACATCAAGGGCAAGGGCGGCAAGGTGTACCAGCAGTACGGCGGGTTCTGCCTGGAGACGCAGGGGTACGTGGACGCCGTGAACCACCCGGAGTTCCCCTCCATGACGGTCAGGCCCGGCCAGGTGTACAGGCACGACATGGCCTTCAAGTTCTCCTTCTAGCTCTCTAGCTGATCAGTCAGGATGATCGTGTGGTTGTAGTATACCATTTTTCAAGATTGTGCGAATAATTATTGGCGTGTTGTTGAAATAATTGAAGAATGGGGTCGTTCTCAAGCATGCGCTCCATGAACAATTATGTTTGCGGCAAGCTATCATGTTCATGAGCAGATATGTACACGTC]
[+] EMBL CB660601             [                                AAGACGAATCGCTTTGCTCACAATGGCTGGAGCTCGGTTGTCTCTCGCGTTCCTGTGCTTTGTGGTGGTGGTGGTGGCCTCCGCGCTCGCCGGCGGCGCCGGTGCGAGGAAGACGGTCGGCGAGTACGTGCTCAGGAAGGGGGACTTCTCCGTGAAGATCACCAACTGGGGAGCAACCATGATGTCGGTCGTCCTCCCTGATTCCAAAGGGAATTTGGCTGATGTTGTGCTTGGCCTAGACACCATTGCTGAGTACGTGAACGACACTAATTACTTCGGGCCGGTTACCGGACGGGTCGGGCAGAGGATAGCCAGGGGGCGGTTCGTTCTCGACGGGAAGGTGTATCACACGTACATCAACGACGGCAGGAACGCGATTCACGGTGGACACAGAGGGTTCAGCAAAGTCATATGGACGGTGAAGGAGTACGTCGGCGGCGGCGACTCGCCGTACATCACCTTGTACTACCGCAGCTTCGACGGAGAGCAAGGTTTCCCCGGGGACCTGGACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCGACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGCGGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACCCCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCCTACGACTTCCGGCACCCCACCCCGATCGGCGCGCGCATCCGGCAGGTGATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB676766             [                                       ATCGCTTTGCTCAC ATGGCTGGAGCTCGGTTGTCTCTCGCGTTCCTGTGCTTTGTGGTGGTGGTGGTGGCCTCCGCGCTCGCCGGCGGCGCCGGTGCGAGGAAGACGGTCGGCGAGTACGTGCTCAGGAAGGGGGACTTCTCCGTGAAGATCACCAACTGGGGAGCAACCATGATGTCGGTCGTCCTCCCTGATTCCAAAGGGAATTTGGCTGATGTTGTGCTTGGCCTAGACACCATTGCTGAGTACGTGAACGACACTAATTACTTCGGGCCGGTTACCGGACGGGTCGGGCAGAGGATAGCCAGGGGGCGGTTCGTTCTCGACGGGAAGGTGTATCACACGTACATCAACGACGGCAGGAACGCGATTCACGGTGGACACAGAGGGTTCAGCAAAGTCATATGGACGGTGAAGGAGTACGTCGGCGGCGGCGACTCGCCGTACATCACCTTGTACTACCGCAGCTTCGACGGAGAGCAAGGTTTCCCCGGGGACCTGGACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCGACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGCGGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACCCCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCCTACGACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB660602             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATCACCTTGTACTACCGCAGCTTCGACGGAGAGCAAGGTTTCCCCGGGGACCTGGACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCGACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGCGGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACCCCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCCTACGACTTCCGGCACCCCACCCCGATCGGCGCGCGCATCCGGCAGGTGATGGGCGGGCGCATCGCCGGGTACGACATCAACTACGTGATCGACGGCGAGGGCATGCGGAAGGTGGCCGCGGCGCGGGACGGCGCGTCGGGCCGCGCGCTGGAGCTGTGGGCGAACCAGCCGGCCATGCAGCTGTACACCGGCAACTGGCTGAACAACATCAAGGGCAAGGGCGGCAAGGTGTACCAGCAGTACGGCGGGTTCTGCCTGGAGACGCAGGGGTACGTGGACGCCGTGAACCACCCGGAGTTCCCCTCCATGACGGTCAGGCCCGGCCAGGTGTACAGGCACGACATGGCCTTCAAGTTCTCCTTCTAGCTCTCTAGCTGATCAGTCAGGATGATCGTGTGGTTGTAGTATACCAGTTTTCAAGATTGTGCGAATAATTATTGGGGTGTTGTAGAGATAATTGAAGAATGGG                                                                              ]
[-] EMBL CB677030             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTCCCCGGGGACCTGGACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCGACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGCGGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACCCCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCCTACGACTTCCGGCACCCCACCCCGATCGGCGCGCGCATCCGGCAGGTGATGGGCGGGCGCATCGCCGGGTACGACATCAACTACGTGATCGACGGCGAGGGCATGCGGAAGGTGGCCGCGGCGCGGGACGGCGCGTCGGGCCGCGCGCTGGAGCTGTGGGCGAACCAGCCGGCCATGCAGCTGTACACCGGCAACTGGCTGAACAACATCAAGGGCAAGGGCGGCAAGGTGTACCAGCAGTACGGCGGGTTCTGCCTGGAGACGCAGGGGTACGTGGACGCCGTGAACCACCCGGAGTTCCCCTCCATGACGGTCAGGCCCGGCCAGGTGTACAGGCACGACATGGCCTTCAAGTTCTCCTTCTAGCTCTCTAGCTGATCAGTCAGGATGATCGTGTGGTTGTAGTATACCATTTTTCAAGATTGTGCGAATAATTATTGGCGTGTTGTTGAAATAATTGAAGAATGGGGTCGTTCTCGAGCATGCGCTCCATGAACAATTATGTTTGCGG                                    ]


>consensus_8791#0 GCATCCCTCTCCTCTCGTCCTGTGAGTTGCCCAAGACGAATCGCTTTGCTCACAATGGCT GGAGCTCGGTTGTCTCTCGCGTTCCTGTGCTTTGTGGTGGTGGTGGTGGCCTCCGCGCTC GCCGGCGGCGCCGGTGCGAGGAAGACGGTCGGCGAGTACGTGCTCAGGAAGGGGGACTTC TCCGTGAAGATCACCAACTGGGGAGCAACCATGATGTCGGTCGTCCTCCCTGATTCCAAA GGGAATTTGGCTGATGTTGTGCTTGGCCTAGACACCATTGCTGAGTACGTGAACGACACT AATTACTTCGGGCCGGTTACCGGACGGGTCGGGCAGAGGATAGCCAGGGGGCGGTTCGTT CTCGACGGGAAGGTGTATCACACGTACATCAACGACGGCAGGAACGCGATTCACGGTGGA CACAGAGGGTTCAGCAAAGTCATATGGACGGTGAAGGAGTACGTCGGCGGCGGCGACTCG CCGTACATCACCTTGTACTACCGCAGCTTCGACGGAGAGCAAGGTTTCCCCGGGGACCTG GACGCGTACGTGACGTACCAGCTGTCGAGCCCGTACGTGCTGGCGCTGCGCATGAACGCG ACGGCGCTGAACAAGGCGACGCCGGTGAACTTCCTGCAGCACACGTACTGGAACCTCGGC GGGCAGGGCCGCGGCGACGTGCTGGGGCACACGCTGCAGCTGTCGGCGTCGCGGTACACC CCGCTGGACGAGGAGCTCCTCCCGTCGTCGGGCGTCGTCGCGCCCGTCGCCGGCACGCCC TACGACTTCCGGCACCCCACCCCGATCGGCGCGCGCATCCGGCAGGTGATGGGCGGGCGC ATCGCCGGGTACGACATCAACTACGTGATCGACGGCGAGGGCATGCGGAAGGTGGCCGCG GCGCGGGACGGCGCGTCGGGCCGCGCGCTGGAGCTGTGGGCGAACCAGCCGGCCATGCAG CTGTACACCGGCAACTGGCTGAACAACATCAAGGGCAAGGGCGGCAAGGTGTACCAGCAG TACGGCGGGTTCTGCCTGGAGACGCAGGGGTACGTGGACGCCGTGAACCACCCGGAGTTC CCCTCCATGACGGTCAGGCCCGGCCAGGTGTACAGGCACGACATGGCCTTCAAGTTCTCC TTCTAGCTCTCTAGCTGATCAGTCAGGATGATCGTGTGGTTGTAGTATACCATTTTTCAA GATTGTGCGAATAATTATTGGCGTGTTGTTGAAATAATTGAAGAATGGGGTCGTTCTCAA GCATGCGCTCCATGAACAATTATGTTTGCGGCAAGCTATCATGTTCATGAGCAGATATGT ACACGTC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)