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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8794 cluster # 8794       Sequences # 5       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8794#0 length = 874 sequences # 5  

consensusID : consensus_8794#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 874
fasta sequence
                              [TTTTTCAATGTCCATGCTATTGGTGGCTAGCTACTCCTTGACCTTCTCACTAGTATAGCCATTAGTAAAACATCCCTTCTTCTTCTTCTTCACTAGCTTCTCACTCACTCACCTCCTCCATATTCCCCTTTCTTGCAAAGGAGAAAGGAACAAGAATAGGATTCAGCTCAGGTCAGCTCCATCACTGCAGAGAATATAAAGATCTGAAAGAGGCAAGCAGACAAGGTCAGGTCAGGTCAGGTCAGAGGAGAAGCTAGCAGCCATGAGTACCATGAAATTTTGCCGCGAATGCAACAACATACTGTATCCCAAGGAGGATAGGGACCAGAAGATTCTGCTCTATGCCTGCAGGAACTGTGACCACCAGGAGGTTGCAGACAACAACTGCGTCTACCGGAATGTGGTGCACCACAGCGCCGGAGAGTTCACCCAAGTGCTCCAGGATGTCGCCGGCGATCCGACTCTCCCTCGCACCAAGGCGGTCCGGTGCGCGGTCTGTGGCCACGGCGAGGCCGTGTTCTTCCAGGCCACTGCCAGAGGGGAGGAAGGGATGACCCTGTTCTTCGTCTGCTGCAACCCGAGCTGCGGTCACAGATGGAGAGAATGAGATCAATTTGTAGTCAACCAAGTGAAGAAAGTCATTGATGCAAATGATCAGAGAGACATATGATTTTGATTTCATCCAAGAGACATTCCATAGAAGCATAGACTGATTGTATGTTTAAATTTTTAAAAACACATTCAGGCATCGGTATTTTGTGTAACTTCTGAAGGAAAAGGATCAAGACTACTAGGATAAAACATTCTGTGGTCTATTCCTTCCTTATAAACAAAGGATGGGATGAGGACAGTTTTCTTGGTGATTCAAAAAAAA]

[+] EMBL CF334813             [TTTTTCAATGTCCATGCTATTGGTGGCTAGCTACTCCTTGACCTTCTCACTAGTATAGCCATTAGTAAAACATCCCTTCTTCTTCTTCTTCACTAGCTTCTCACTCACTCACCTCCTCCATATTCCCCTTTCTTGCAAAGGAGAAAGGAACAAGAATAGGATTCAGCTCAGGTCAGCTCCATCACTGCAGAGAATATAAAGATCTGAAAGAGGCAAGCAGACAAGGTCAGGTCAGGTCAGGTCAGAGGAGAAGCTAGCAGCCATGAGTACCATGAAATTTTGCCGCGAATGCAACAACATACTGTATCCCAAGGAGGATAGGGACCAGAAGATTCTGCTCTATGCCTGCAGGAACTGTGACCACCAGGAGGTTGCAGACAACAACTGCGTCTACCGGAATGTGGTGCACCACAGCGCCGGAGAGTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF333047             [     CAATGTCCATGCTATTGGTGGCTAGCTACTCCTTGACCTTCTCACTAGTATAGCCATTAGTAAAACATCCCTTCTTCTTCTTCTTCACTAGCTTCTCACTCACTCACCTCCTCCATATTCCCCTTTCTTGCAAAGGAGAAAGGAACAAGAATAGGATTCAGCTCAGGTCAGCTCCATCACTGCAGAGAATATAAAGATCTGAAAGAGGCAAGCAGACAAGGTCAGGTCAGGTCAGGTCAGAGGAGAAGCTAGCAGCCATGAGTACCATGAAATTTTGCCGCGAATGCAACAACATACTGTATCCCAAGGAGGATAGGGACCAGAAGATTCTGCTCTATGCCTGCAGGAACTGTGACCACCAGGAGGTTGCAGACAACAACTGCGTCTACCGGAATGTGGTGCACCACAGCGCCGGAGAGTTCACCCAAGTGCTCCAGGATGTCGCCGGCGATCCGACTCT                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK062352             [                                                                                                                                                                                                                                                                                               AATGCAACAACATACTGTATCCCAAGGAGGATAGGGACCAGAAGATTCTGCTCTATGCCTGCAGGAACTGTGACCACCAGGAGGTTGCAGACAACAACTGCGTCTACCGGAATGTGGTGCACCACAGCGCCGGAGAGTTCACCCAAGTGCTCCAGGATGTCGCCGGCGATCCGACTCTCCCTCGCACCAAGGCGGTCCGGTGCGCGGTCTGTGGCCACGGCGAGGCCGTGTTCTTCCAGGCCACTGCCAGAGGGGAGGAAGGGATGACCCTGTTCTTCGTCTGCTGCAACCCGAGCTGCGGTCACAGATGGAGAGAATGAGATCAATTTGTAGTCAACCAAGTGAAGAAAGTCATTGATGCAAATGATCAGAGAGACATATGATTTTGATTTCATCCAAGAGACATTCCATAGAAGCATAGACTGATTGTATGTTTAAATTTTTAAAAACACATTCAGGCATCGGTATTTTGTGTAACTTCTGAAGGAAAAGGATCAAGACTACTAGGATAAAACATTCTGTGGTCTATTCCTTCCTTATAAACAAAGGATGGGATGAGGACAGTTTTCTTGGTGAT          ]
[-] EMBL CF334814             [                                                                                                                                                                                                                                                                                                                                                                AACTGTGACCACCAGGAGGTTGCAGACAACAACTGCGTC ACCGGAATGTGGTGCACCACAGCGCC GAGAGTTCACCCAAGTGCTCCAGGATGTCGCCGGCGATCCGACTCTCCCTCGCACCAAGGCGGTCCGGTGCGCGGTCTGTGGCCACGGCGAGGCCGTGTTCTTCCAGGCCACTGCCAGAGGGGAGGAAGGGATGACCCTGTTCTTCGTCTGCTGCAACCCGAGCTGCGGTCACAGATGGAGAGAATGAGATCAATTTGTAGTCAACCAAGTGAAGAAAGTCATTGATGCAAATGATCAGAGAGACATATGATTTTGATTTCATCCAAGAGACATTCCATAGAAGCATAGACTGATTGTATGTTTAAATTTTTAAAAACACATTCAGGCATCGGTATTTTGTGTAACTTCTGAAGGAAAAGGATCAAGACTATTAGGATAAAACATTCTGTGGTCTATTCCTTCCTTATAAACAAAGGATGGGATGAGGACAGTTTTCTTGGTGATTCAAAAAAAA]
[-] EMBL CF311797             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CACCAAGGCGGTCCGGTGCGCGGTCTGTGGCCACGGCGAGGCCGT TTGTTCCAGGCCACTGCCAGAGGGGAGGAAGGGATGACCCTGTTCTTTGTCTGATGCAACCCCAGCTGCGGTCACAGATGGAGAGAATGAGATCAATTTGTAGTCAACCAAGTTAAGAAAGTCATTCATGCAAATGATCAAAGATACATATGATTTTGATTTCATCCAAGAGACATTCCA                                                                                                                                                                                 ]


>consensus_8794#0 TTTTTCAATGTCCATGCTATTGGTGGCTAGCTACTCCTTGACCTTCTCACTAGTATAGCC ATTAGTAAAACATCCCTTCTTCTTCTTCTTCACTAGCTTCTCACTCACTCACCTCCTCCA TATTCCCCTTTCTTGCAAAGGAGAAAGGAACAAGAATAGGATTCAGCTCAGGTCAGCTCC ATCACTGCAGAGAATATAAAGATCTGAAAGAGGCAAGCAGACAAGGTCAGGTCAGGTCAG GTCAGAGGAGAAGCTAGCAGCCATGAGTACCATGAAATTTTGCCGCGAATGCAACAACAT ACTGTATCCCAAGGAGGATAGGGACCAGAAGATTCTGCTCTATGCCTGCAGGAACTGTGA CCACCAGGAGGTTGCAGACAACAACTGCGTCTACCGGAATGTGGTGCACCACAGCGCCGG AGAGTTCACCCAAGTGCTCCAGGATGTCGCCGGCGATCCGACTCTCCCTCGCACCAAGGC GGTCCGGTGCGCGGTCTGTGGCCACGGCGAGGCCGTGTTCTTCCAGGCCACTGCCAGAGG GGAGGAAGGGATGACCCTGTTCTTCGTCTGCTGCAACCCGAGCTGCGGTCACAGATGGAG AGAATGAGATCAATTTGTAGTCAACCAAGTGAAGAAAGTCATTGATGCAAATGATCAGAG AGACATATGATTTTGATTTCATCCAAGAGACATTCCATAGAAGCATAGACTGATTGTATG TTTAAATTTTTAAAAACACATTCAGGCATCGGTATTTTGTGTAACTTCTGAAGGAAAAGG ATCAAGACTACTAGGATAAAACATTCTGTGGTCTATTCCTTCCTTATAAACAAAGGATGG GATGAGGACAGTTTTCTTGGTGATTCAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)