These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8814#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2912 fasta sequence [TTGCCGGTGGCGCGCCTTTGGGCCCATGGCCATGGCGCACATGCTTGGATGGGCCGGCCCGTCGCTCCACGCCTCGGATCACCACTGTCTTCGCCCGCGGCGGCGCACGCCGCCGCCGGAGCCCCTGCCCCCTCTCGGGCGGCGCGGCGGGGACCGGGGCTCACCGCGGCCATGCGCTGTTCTTGCTATCCCTCTCGTCAGTTTGTGCCCTCACCCTGATGATTTCCGTTTCACTAGCCTTGCACTTCTTGTCTTCTTCCACTCAACAGGTTGGCGCTAGGTTTTGCCGATTGGGGATGAACTCGTGACGAAATTGCAATGTGGGGCTCTCTCTCGGTAATGGATTGGAGAAGTGATGAACGGCGAGCTTAAACTTATGGCTTCCTATGTGAGCAAGCTTAAGTTCATCTTGCAAAAAGATCAGCAGCAGGAGCCCCATACTGCGAACCTTCTAGTCCTACTTGGGAGTAGCAATCAGGACAAAAGAAATGGCCTCTCACAGGGAGAAAACAGAATGGACACTTGTACCAGAAAGAAGCCAAGAAGATACCAACTCCTCACCATGCAACAAAAAGAAACGCTTAATCGTGCATTTCAATCATGTCCGAACCCTGATAGAAATGACTTGAAGAAGTTGGCCAAGGAACTAAACATGACTGAGACCCAAATCAAATATTGGTTCCAGAACTGCAGGACAAAGATGAAGAAATTCAAGAACAATGAGGAGCGCAAACTACTGCAGAAGGAGAATGAGGAGCTAAAGAAGGAGAATGCAGAGTTGAGAAATAGGATGAAGAACTCAACATGCCGCGCTTGTGACCTCCCTTTGTTCCATATAGATTGCCGTCATTGGGAGAATCCAATGCTCAACAAGGGTAATCATGGCGTTACAAGTAATCTCATTCCTCAGGCAGTGTCATCCTTGCTCCCCAGCTCAAGTGGTTTTGTAGCTTCAGGCTCCAATCTTAGTAGCAATGCTGTGCTCATGCCCGTATCTGCCATGCCATCATCAGTTTTGCAGCCTGCTCCAGCCGTCTCTGGTGCCAATTTTCCCATCTTGCACAATCTATCTGCCAATGCAAATGATGGCTATACGGAAAAAAACGTACTTCTTGATCTGGCGAACCGTGCAATGGAAGAGTTCTTTAGTCTAATGAAGGAGAATGAGTCTCTTCTTGTCAAAAAAAAGGAGAATGGGCCTCTCTGGCTCCCACACATGGATATTCTGGGAGTCGAATCACTTAACTACCAGGAATACCTTGCAAAATCCAGGACGATTGGACAAAAACCTGTTGACTTCAAAGTGGTCGTCACCAGGGACACTGCCATTGTCAATGGTAGCTGTGTTGACCTCGTCAAAAGCCTTTTGGATGCTAACCGCTGGAGAGAGTTGTTTCCAGGCATCGTGGCAAGTGCAAACACCACCAAGATCATCTCTACTGGGCCCTCTAACTTGCACGACGGGTTGCTTCAATTGATGCGTGCAGAGCTCCAGGTAATGTCACCTGAAGTCCCAGTTTGCGATGTGACATTCTTGAGGCAGAGTGTGCAGTTTGGAAGTGGACTGTGGTGTGTGGTTGATGTGTCTATTGATACCATCCTTCCTGGAGAGAGTAAAACAGCTCAGTCCAGTGTGCAGACCAGCAGTACAGCTGCCAGACGCATGGAAGTCAGGCTGTTGCCATCAGGCTGTGTTATTGAAGAAATGGAGAATGGCTATTCCAAGGTGACCTGGATGGTGCATGCAGCTTATGATGAGAGAGCAGTGCCAGTGCTTTATCATTCACTTCTCCGCTCTGCAAAAGCCCTTGGTGCGTGCCGCTGGGTAGCATCACTCCAGAGACACAGCCAGTTCCTTTCCGGCCTGCACAAATACATCTTTTGTCCTGACAGCACAATGACAGAAGTGGTGATGCGAAGAAAAGTCCTGTACCTGGTGAAGCAGATGACGAGCAGCTTCACAGGCCTATTTGCGTCGATGTCTAAGGCCACGCTGCAAGATGGTGATGATACTCACTTCGCGCATCAGATAGTTGGTGGTGCAACAGGTGAACCTGCCGGACTGCTGCTGAGCGCCACCACAACCATATGGCTCCCCGGCGTGAACCCGAGGCACGTGTATGACCACCTGCGTGATGAGCAGTGCCATGGTGAATGGCGCTGCCTCCTCGGTGAGCAGCTGCATCAGGGCAATGCCTTGCCGTATGGTGCCCCCCTGAATGGTGAGACCGTGCCAGAGTTCTATCGCATGGTGAACGGGCTGCATGAAGGGCATGCTATCTCCCTGATCAGCCCCAGAGAAATGGGTGGTAACATAAGCAACACTCTGCTCCTGCAAGAGGCAAGAACTGATCTTTCTGGCTCCCTCATAGTTTACGCCAGGACAGATGTGAACACCGTGCATTCCATCATGAACAGTGGCCTCAACCCTGCCACCGTCTTCCTCGTATCCTCTGGATGTGCCATTCTTCCTGATTGCCTGGAATCATTCCCTCTACACCCAGCTGCAACTGCAGATCAGGCCGGCACCTCCAGTGCCGCTATCGCTAGCAGGAGCGAAACCGGTGGGTCATTCGTCACCGTCACTTACCAGATGTTTTTCAGCAGCCAAGGTGGCGCAGCACCTGCCAGCTCATCAATTCATCAAGGCCGTGATGCGCTCAAGAAAGCCACCGACATTTTCAA-GGTGGTCCTCGACACTCTCACCGTGGCATAGCGCAATACCCCAGGGGTAGCATTTGCATGCGAAAGTGAAATCCAGATCGAGTTAAATTTCAGTGTTTAAGACTATGT-TGTTTCTGTTGTTCAGGGGAT-GGCTTTATCTC-TGATAGACCCGTGGATCATGCTGTTTACCTTGTTTACCATTTTCAGACTATCGATTTGAAATGTTGATCAGACATTTATAATAATTG] [+] EMBL C72532 [TTGCCGGTGGCGCGCCTTTGGGCCCATGGCCATGGCGCACATGCTTGGATGGGCCGGCCCGTCGCTCCACGCCTCGGATCACCACTGTCTTCGCCCGCGG GGCGCACGCC CNG NGAGGCCCCTGCCCCCTCTCGGGCGGCGCGGCGGGGACCGGGGCTCACCGCGGTCATGCGCTGTTCTTGCTATCCCTCTCGTCAGTTTGTGCCCTCACCCTGATGATTTCCGTTTCACTAGCCTTGCACTTCTTGTCTTCTTCCACTCAACAGGTTGGCGCTAGGTTTTGCCGATTGGGGATGAACTCGTGACGAAATTGCAATGTGGGGCTCTCTCTCGGTAATGGATTGGAGAAGTGATGAACGGCGAGCTTAAACTTATGGCTTCCTATGTGAGCAAG TTAAGTTNATCTTGCAA ] [+] EMBL AK100441 [ CATGCTTGGATGGGCCGGCCCGTCGCTCCACGCCTCGGATCACCACTGTCTTCGCCCGCGGCGGCGCACGCCGCCGCCGGAGCCCCTGCCCCCTCTCGGGCGGCGCGGCGGGGACCGGGGCTCACCGCGGCCATGCGCTGTTCTTGCTATCCCTCTCGTCAGTTTGTGCCCTCACCCTGATGATTTCCGTTTCACTAGCCTTGCACTTCTTGTCTTCTTCCACTCAACAGGTTGGCGCTAGGTTTTGCCGATTGGGGATGAACTCGTGACGAAATTGCAATGTGGGGCTCTCTCTCGGTAATGGATTGGAGAAGTGATGAACGGCGAGCTTAAACTTATGGCTTCCTATGTGAGCAAGCTTAAGTTCATCTTGCAAAAAGATCAGCAGCAGGAGCCCCATACTGCGAACCTTCTAGTCCTACTTGGGAGTAGCAATCAGGACAAAAGAAATGGCCTCTCACAGGGAGAAAACAGAATGGACACTTGTACCAGAAAGAAGCCAAGAAGATACCAACTCCTCACCATGCAACAAAAAGAAACGCTTAATCGTGCATTTCAATCATGTCCGAACCCTGATAGAAATGACTTGAAGAAGTTGGCCAAGGAACTAAACATGACTGAGACCAAAATCAAATATTGGTTCCAGAACTGCAGGACAAAGATGAAGAAATTCAAGAACAATGAGGAGCGCAAACTACTGCAGAAGGAGAATGAGGAGCTAAAGAAGGAGAATGCAGAGTTGAGAAATAGGATGAAGAACTCAACATGCCGCGCTTGTGACCTCCCTTTGTTCCATATAGATTGCCGTCATTGGGAGAATCCAATGCTCAACAAGGGTAATCATGGCGTTACAAGTAATCTCATTCCTCAGGCAGTGTCATCCTTGCTCCCCAGCTCAAGTGGTTTTGTAGCTTCAGGCTCCAATCTTAGTAGCAATGCTGTGCTCATGCCCGTATCTGCCATGCCATCATCAGTTTTGCAGCCTGCTCCAGCCGTCTCTGGTGCCAATTTTCCCATCTTGCACAATCTATCTGCCAATGCAAATGATGGCTATACGGAAAAAAACGTACTTCTTGATCTGGCGAACCGTGCAATGGAAGAGTTCTTTAGTCTAATGAAGGAGAATGAGTCTCTTCTTGTCAAAAAAAAGGAGAATGGGCCTCTCTGGCTCCCACACATGGATATTCTGGGAGTCGAATCACTTAACTACCAGGAATACCTTGCAAAATCCAGGACGATTGGACAAAAACCTGTTGACTTCAAAGTGGTCGTCACCAGGGACACTGCCATTGTCAATGGTAGCTGTGTTGACCTCGTCAAAAGCCTTTTGGATGCTAACCGCTGGAGAGAGTTGTTTCCAGGCATCGTGGCAAGTGCAAACACCACCAAGATCATCTCTACTGGGCCCTCTAACTTGCACGACGGGTTGCTTCAATTGATGCGTGCAGAGCTCCAGGTAATGTCACCTGAAGTCCCAGTTTGCGATGTGACATTCTTGAGGCAGAGTGTGCAGTTTGGAAGTGGACTGTGGTGTGTGGTTGATGTGTCTATTGATACCATCCTTCCTGGAGAGAGTAAAACAGCTCAGTCCAGTGTGCAGACCAGCAGTACAGCTGCCAGACGCATGGAAGTCAGGCTGTTGCCATCAGGCTGTGTTATTGAAGAAATGGAGAATGGCTATTCCAAGGTGACCTGGATGGTGCATGCAGCTTATGATGAGAGAGCAGTGCCAGTGCTTTATCATTCACTTCTCCGCTCTGCAAAAGCCCTTGGTGCGTGCCGCTGGGTAGCATCACTCCAGAGACACAGCCAGTTCCTTTCCGGCCTGCACAAATACATCTTTTGTCCTGACAGCACAATGACAGAAGTGGTGATGCGAAGAAAAGTCCTGTACCTGGTGAAGCAGATGACGAGCAGCTTCACAGGCCTATTTGCGTCGATGTCTAAGGCCACGCTGCAAGATGGTGATGATACTCACTTCGCGCATCAGATAGTTGGTGGTGCAACAGGTGAACCTGCCGGACTGCTGCTGAGCGCCACCACAACCATATGGCTCCCCGGCGTGAACCCGAGGCACGTGTATGACCACCTGCGTGATGAGCAGTGCCATGGTGAATGGCGCTGCCTCCTCGGTGAGCAGCTGCATCAGGGCAATGCCTTGCCGTATGGTGCCCCCCTGAATGGTGAGACCGTGCCAGAGTTCTATCGCATGGTGAACGGGCTGCATGAAGGGCATGCTATCTCCCTGATCAGCCCCAGAGAAATGGGTGGTAACATAAGCAACACTCTGCTCCTGCAAGAGGCAAGAACTGATCTTTCTGGCTCCCTCATAGTTTACGCCAGGACAGATGTGAACACCGTGCATTCCATCATGAACAGTGGCCTCAACCCTGCCACCGTCTTCCTCGTATCCTCTGGATGTGCCATTCTTCCTGATTGCCTGGAATCATTCCCTCTACACCCAGCTGCAACTGCAGATCAGGCCGGCACCTCCAGTGCCGCTATCGCTAGCAGGAGCGAAACCGGTGGGTCATTCGTCACCGTCACTTACCAGATGTTTTTCAGCAGCCAAGGTGGCGCAGCACCTGCCAGCTCATCAATTCATCAAGGCCGTGATGCGCTCAAGAAAGCCACCGACATTTTCAA GGTGGTCCTCGACACTCTCACCGTGGCATAGCGCAATACCCCAGGGGTAGCATTTGCATGCGAAAGTGAAATCCAGATCGAGTTAAATTTCAGTGTTTAAGACTATGT TGTTTCTGTTGTTCAGGGGAT GGCTTTATCTC TGATAGACCCGTGGATCATGCTGTTTACCTTGTTTACCATTTTCAGACTATCGATTTGAAATGTTGATCAGACATTTATAATAATTG] [+] EMBL CB634575 [ CGCTCCACGCCTCGGATCACCACTGTCTTCGCCCGCGGCGGCGCACGCCGCCGCCGGAGCCCCTGCCCCCTCTCGGGCGGCGCGGTGGGGACCGGGGCTCACCGCGGCCATGCGCTGTTCTTGCTATCCCTCTCGTCAGTTTGTGCCCTCACCCTGATGATTTCCGTTTCACTAGCCTTGCACTTCTTGTCTTCTTCCACTCAACAGGTTGGCGCTAGGTTTTGCCGATTGGGGATGAACTCGTGACGAAATTGCATTGTGGGGCTCTCTCTCGGTAATGGATTGGAGAAGTGATGGACGGCGAGCTTAAACTTATGGCTTCCTATGTGAGCAAGCTTAAGTTCATCTTGCAAAAAGATCAGCAGCAGGAGCCCCATACTGCGAACCTTCTAGTCCTACTTGGGAGTAGCAATCAGGACAAAAGACATGGCCTCTCACAGGGAGAAAACAGAATGGACACTTGTACCAGAAAGAAGCCAAGAAGATACCAACTCCTCACCATGCAACAAAAAGAAACGCTTAATCGTGCATTTCAATCATGTCCGAACCCTGATAGAAATGACTTGAAGAAGTTGGCCAAGGAACTAAACATGACTGAGACCCAAATCAAATATTGGTTCCAGAACTGCAGGACAAAGATGAAGAAATTCAAGAACAATGAGGAGCGCAAACTACTGCAGAAGGAGAATGAGGAGCTGAAGAAGGAGAATGCAGAGTTGAGAAATAGGATGAA ] [+] EMBL AK073784 [ CCTGCCCCCTCTCGGGCGGCGCGGCGGGGACCGGGGCTCACCGCGGCCATGCGCTGTTCTTGCTATCCCTCTCGTCAGTTTGTGCCCTCACCCTGATGATTTCCGTTTCACTAGCCTTGCACTTCTTGTCTTCTTCCACTCAACAGGTTGGCGCTAGGTTTTGCCGATTGGGGATGAACTCGTGACGAAATTGCAATGTGGGGCTCTCTCTCGGTAATGGATTGGAGAAGTGATGAACGGCGAGCTTAAACTTATGGCTTCCTATGTGAGCAAGCTTAAGTTCATCTTGCAAAAAGATCAGCAGCAGGAGCCCCATACTGCGAACCTTCTAGTCCTACTTGGGAGTAGCAATCAGGACAAAAGAAATGGCCTCTCACAGGGAGAAAACAGAATGGACACTTGTACCAGAAAGAAGCCAAGAAGATACCAACTCCTCACCATGCAACAAAAAGAAACGCTTAATCGTGCATTTCAATCATGTCCGAACCCTGATAGAAATGACTTGAAGAAGTTGGCCAAGGAACTAAACATGACTGAGACCCAAATCAAATATTGGTTCCAGAACTGCAGGACAAAGATGAAGAAATTCAAGAACAATGAGGAGCGCAAACTACTGCAGAAGGAGAATGAGGAGCTAAAGAAGGAGAATGCAGAGTTGAGAAATAGGATGAAGAACTCAACATGCCGCGCTTGTGACCTCCCTTTGTTCCATATAGATTGCCGTCATTGGGAGAATCCAATGCTCAACAAGGGTAATCATGGCGTTACAAGTAATCTCATTCCTCAGGCAGTGTCATCCTTGCTCCCCAGCTCAAGTGGTTTTGTAGCTTCAGGCTCCAATCTTAGTAGCAATGCTGTGCTCATGCCCGTATCTGCCATGCCATCATCAGTTTTGCAGCCTGCTCCAGCCGTCTCTGGTGCCAATTTTCCCATCTTGCACAATCTATCTGCCAATGCAAATGATGGCTATACGGAAAAAAACGTACTTCTTGATCTGGCGAACCGTGCAATGGAAGAGTTCTTTAGTCTAATGAAGGAGAATGAGTCTCTTCTTGTCAAAAAAAAGGAGAATGGGCCTCTCTGGCTCCCACACATGGATATTCTGGGAGTCGAATCACTTAACTACCAGGAATACCTTGCAAAATCCAGGACGATTGGACAAAAACCTGTTGACTTCAAAGTGGTCGTCACCAGGGACACTGCCATTGTCAATGGTAGCTGTGTTGACCTCGTCAAAAGCCTTTTGGATGCTAACCGCTGGAGAGAGTTGTTTCCAGGCATCGTGGCAAGTGCAAACACCACCAAGATCATCTCTACTGGGCCCTCTAACTTGCACGACGGGTTGCTTCAATTGATGCGTGCAGAGCTCCAGGTAATGTCACCTGAAGTCCCAGTTTGCGATGTGACATTCTTGAGGCAGAGTGTGCAGTTTGGAAGTGGACTGTGGTGTGTGGTTGATGTGTCTATTGATACCATCCTTCCTGGAGAGAGTAAAACAGCTCAGTCCAGTGTGCAGACCAGCAGTACAGCTGCCAGACGCATGGAAGTCAGGCTGTTGCCATCGGGCTGTGTTATTGAAGAAATGGAGAATGGCTATTCCAAGGTGACCTGGATGGTGCATGCAGCTTATGATGAGAGAGCAGTGCCAGTGCTTTATCATTCACTTCTCCGCTCTGCAAAAGCCCTTGGTGCGTGCCGCTGGGTAGCATCACTCCAGAGACACAGCCAGTTCCTTTCCGGCCTGCACAAATACATCTTTTGTCCTGACAGCACAA AAGTGGTGATGCGAAGAAAAGTCCTGTACCTGGTGAAGCAGATGACGAGCAGCTTCACAGGCCTATTTGCGTCGATGTCTAAGGCCACGCTGCAAGATGGTGATGATACTCACTTCGCGCATCAGATAGTTGGTGGTGCAACAGGTGAACCTGCCGGACTGCTGCTGAGCGCCACCACAACCATATGGCTCCCCGGCGTGAACCCGAGGCACGTGTATGACCACCTGCGTGATGAGCAGTGCCATGGTGAATGGCGCTGCCTCCTCGGTGAGCAGCTGCATCAGGGCAATGCCTTGCCGTATGGTGCCCCCCTGAATGGTGAGACCGTGCCAGAGTTCTATCGCATGGTGAACGGGCTGCATGAAGGGCATGCTATCTCCCTGATCAGCCCCAGAGAAATGGGTGGTAACATAAGCAACACTCTGCTCCTGCAAGAGGCAAGAACTGATCTTTCTGGCTCCCTCATAGTTTACGCCAGGACAGATGTGAACACCGTGCATTCCATCATGAACAGTGGCCTCAACCCTGCCACCGTCTTCCTCGTATCCTCTGGATGTGCCATTCTTCCTGATTGCCTGGAATCATTCCCTCTACACCCAG ] [+] EMBL CB677066 [ TTGTACCAGAAAGAAGCCAAGAAGATACCAACTCCTCACCATGCAACAAAAAGAAACGCTTAATCGTGCATTTCAATCATGTCCGAACCCTGATAGAAATGACTTGAAGAAGTTGGCCAAGGAACTAAACATGACTGAGACCCAAATCAAATATTGGTTCCAGAACTGCAGGACAAAGATGAAGAAATTCAAGAACAATGAGGAGCGCAAACTACTGCAGAAGGAGAATGAGGAGCTAAAGAAGGAGAATGCAGAGTTGAGAAATAGGATGAAGAACTCAACATGCCGCGCTTGTGACCTCCCTTTGTTCCATATAGATTGCCGTCATTGGGAGAATCCAATGCTCAACAAGGGTAATCATGGCGTTACAAGTAATCTCATTCCTCAGGCAGTGTCATCCTTGCTCCCCAGCTCAAGTGGTTTTGTAGCTTCAGGCTCCAATCTTAGTAGCAATGCTGTGCTCATGCCCGTATCTGCCATGCCATCATCAGTTTTGCAGCCTGCTCCAGCCGTCTCTGGTGCCAATTTTCCCATCTTGCACAATCTATCTGCCAATGCAAATGATGGCTATACGGAAAAAAACGTACTTCTTGATCTGGCGAACCGTGCAATGGAAGAGTTCTTTAGTCTAATGAAGGAGAATGAGTCTCTTCTTGTCAAAAAAAAGGAGAATGGGCCTCTCTGGCTCCCACACATGGATATTCTGGGAGTCGAATCACTTAACTACCAGGAATACCTTGCAAAATCCAGGACGATTGGACAAAAACCTGTTGACTTCAAAGTGGTCGTCACCAGGGAC ] [+] EMBL CA758141 [ CACGCTGCAAGATGGTGATGATACTCACTTCGCGCATCAGATAGTTGGTGGTGCAACAGGTGAACCTGCCGGACTGCTGCTGAGCGCCACCACAACCATATGGCTCCCTGGCGTGAACCCGAGGCGCGTGTATGACCACCTGCGTGATGAGCAGTGCCATGGTGAATGGCGCTGCCTCCTCGGTGAGCAGCTGCATCAGGGCAATGCCTTGCCGTATGGTGCCCCCCTGAATGGTGAGACCGTGCCAGAGTTCTATCGCATGGTGAACGGGCTGCATGAAGGGCATGCTATCTCCCTGATCAGCCCAAGAGAAATGGGTGGTAACATAAGCAACACTCTGCTCCTGCAAGAGGCAAGAACTGATCTTTCTGGCTCCCTCATAGTTTACGCCAGGACAGATGTGAACACCGTGCATTCCATCATGAACAGTGGCCTCAACCCTGCCACCGTCTTCCTCGTATCCTCTGGATGTGCCATTCTTCCTGATTGCCTGGAATCATTCCCTCTACACCCAGCTGCAACTGCAGATCAGGCCGGCACCTCCAGTGCCGCTATCGCTAGCAGGAGCGAAACCGGTGGGTCATTCGTCACCGTCACTTACCAGATGTTTTTCAGCAGCCAAGGTGGCGCAGCACCTGCCAGCTCATCAATTCATCAAGGCCGTGATGCGCTCAAGAAAGCCACCGACATTTTCAAGGGTGGTCCTCGACACTATCACCGTGGCATAGCGCAATACCCCAGGGGTAGCATTTGCATGCGAAAATGAAATCCAGATCGAGTAAAATTTCAGGGTTTAAGACTATGTGGGTTTCTGTTGTTCAGGGGATAGCCTTTATCTCTTGA AAACCCGTGGAacca ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||