cluster # 8818

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8818 cluster # 8818 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8818#0 length = 1541 sequences # 6
consensusID : consensus_8818#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1541
fasta sequence
                              [TCTACCCGTCTCCATTGGAGGTGGTGGGTGCGAGTTGGGAAAGGCGAGAGGGAGGGAGATGCTGCGAGAGAGGTCGTCGCGGAGGCGGATGGCGAGCTCGAGCACCGCCGCGGCGGCGCTGGTAGTGGCGGCGCTTCTGCTCTCGTCGTCTCCCTCACCGGCGGCGGCGGCCGCGGGACGAGGAGGAGAACTCAGGATGAAGCATTCTGATGGTGGCTATTCTTATAACCGCACTCTCGCCCATATTTTTGTGCAATATGCATCTGCTGTGTATACGTCTGACTTAACCTCACTTTTCGCGTGGACATGCCCAAGGTGTCAAAGTGACACAAAGGGTTTTGAGATGATAGAGATAATTGTAGATGTGGAGAACTGCTTACAGGCTTTTGTTGGAGTCGCCCCTGATCCACAATCCATACTCATTGCTTTTAGAGGCACACAAGAACACAGTGTCTCGAATTGGATTGAAGATCTCTTCTGGAAGCAGCTTGATGTAGGTTATCCAGGCATGCCAGATGCAATGGTTCATCATGGGTTTTATACTGCATATTATAATACAACAGTGCGGCATGAGATCTTGGAATCTGTTCGGTGGGCAAGGAAGACATATGGAAGGCTACCTATAAATGTTGTAGGTCACTCGATGGGAGGGGCTTTAGCATCGTTCTGTGCCCTTGACCTCTCTGTTAAGTATGGATCGCAGGAAGTTCAACTCATGACTTTTGGACAGCCTCGGGTAGGCAATCCTTCTTTTGCTGCGTACTTCAGTGACCAAGTCCCGAGAACAATCCGTGTGACCCATCAGAATGACATTGTCCCACACTTGCCACCATATTTTTGCTACCTTGGCGA-ATGGACATATCACCACTTCTCGAGAGAGGTTTGGCTTCATGAGACCATAGTAGGAAATGTAGTTACTAGGAATGAGACCATCTGTGATGGATCAGGCGAGGACCCAACATGCAGCAGATCGGTCTACGGCAGAAGTGTTGCAGATCATCTTGAATACTACGGTGTCTCACTACACGCTGATTCAAGGGGAACCTGTCAATTTGTGATTGGCTCAACCAACAT-GGCATATGGTACCATTCTTGAAGTTGATAGAACCATCATCATGACAAGATATCCGCAAGAGTGGCACGCCGTGGAATCTATTTAACCCTTTGCCCGAGGGTAAATTGTATATAATTATTTTCCTTTTGTGCATATAGCTCATGTAATGTAGGTGTACTGGGTTCTCCAGGAGCTCTCCTGAGGATAAGGAGAGGTTTCATTTTTAATATGTGCCCCCCTTTACTCAAGTGAGAATTGTACATGGAAGCTCCATATGAACATTGTAGACACGCCTTTATTGATGTACATAGCAATATCAATGGAATAAATAATAGAAGGATTTGATGGTCCCNACCCCCCCACCAACACAGAACCAGCCAGCCGGGCTCGCGCCCTTCGTGTGGGCCCCGGTACCCCATTCTCTCGGGGGGGGCCCGGAACCCAATCCCCCCATTGGGGAAGGCTAAAAACGCCCCTCCTGGGCCCTC]

[+] EMBL AK099612             [TCTACCCGTCTCCATTGGAGGTGGTGGGTGCGAGTTGGGAAAGGCGAGAGGGAGGGAGATGCTGCGAGAGAGGTCGTCGCGGAGGCGGATGGCGAGCTCGAGCACCGCCGCGGCGGCGCTGGTAGTGGCGGCGCTTCTGCTCTCGTCGTCTCCCTCACCGGCGGCGGCGGCCGCGGGACGAGGAGGAGAACTCAGGATGGAGCATTCTGATGGTGGCTATTCTTATAACCGCACTCTCGCCCATATTTTTGTGCAATATGCATCTGCTGTGTATACGTCTGACTTAACCTCACTTTTCGCGTGGACATGCCCAAGGTGTCAAAGTGACACAAAGGGTTTTGAGATGATAGAGATAATTGTAGATGTGGAGAACTGCTTACAGGCTTTTGTTGGAGTCGCCCCTGATCCACAATCCATACTCATTGCTTTTAGAGGCACACAAGAACACAGTGTCTCGAATTGGATTGAAGATCTCTTCTGGAAGCAGCTTGATGTAGGTTATCCAGGCATGCCAGATGCAATGGTTCATCATGGGTTTTATACTGCATATTATAATACAACAGTGCGGCATGAGATCTTGGAATCTGTTCGGTGGGCAAGGAAGACATATGGAAGGCTACCTATAAATGTTGTAGGTCACTCGATGGGAGGGGCTTTAGCATCGTTCTGTGCCCTTGACCTCTCTGTTAAGTATGGATCGCAGGAAGTTCAACTCATGACTTTTGGACAGCCTCGGGTAGGCAATCCTTCTTTTGCTGCGTACTTCAGTGACCAAGTCCCGAGAACAATCCGTGTGACCCATCAGAATGACATTGTCCCACACTTGCCACCATATTTTTGCTACCTTGGCGA ATGGACATATCACCACTTCTCGAGAGAGGTTTGGCTTCATGAGACCATAGTAGGAAATGTAGTTACTAGGAATGAGACCATCTGTGATGGATCAGGCGAGGACCCAACATGCAGCAGATCGGTCTACGGCAGAAGTGTTGCAGATCATCTTGAATACTACGGTGTCTCACTACACGCTGATTCAAGGGGAACCTGTCAATTTGTGATTGGCTCAACCAACAT GGCATATGGTACCATTCTTGAAGTTGATAGAACCATCATCATGACAAGATATCCGCAAGAGTGGCACGCCGTGGAATCTATTTAACCCTTTGCCCGAGGGTAAATTGTATATAATTATTTTCCTTTTGTGCATATAGCTCATGTAATGTAGGTGTACTGGGTTCTCCAGGAGCTCTCCTGAGGATAAGGAGAGGTTTCATTTTTAATATGTGCCCCCCTTTACTCAAGTGAGAATTGTACATGGAAGCTCCATATGAACATTGTAGACACGCCTTTATTGATGTACATAGCAATATCAATGGAATAAATAATAGAAGGATT                                                                                                                                                  ]
[-] EMBL CB663509             [                                                         GATGCTGCGAGAGAGGTCGTCGCGGAGGCGGATGGCGAGCTCGAGCACCGCCGCGGCGGCGCTGGTAGTGGCGGCGCTTCTGCTCTCGTCGTCTCCCTCACCGGCGGCGGCGGCCGCGGGACGAGGAGGAGAACTCAGGATGAAGCATTCTGATGGTGGCTATTCTTATAACCGCACTCTCGCCCATATTTTTGTGCAATATGCATCTGCTGTGTATACGTCTGACTTAACCTCACTTTTCGCGTGGACATGCCCAAGGTGTCAAAGTGACACAAAGGGTTTTGAGATGATAGAGATAATTGTAGATGTGGAGAACTGCTTACAGGCTTTTGTTGGAGTCGCCCCTGATCCACAATCCATACTCATTGCTTTTAGAGGCACACAAGAACACAGTGTCTCGAATTGGATTGAAGATCTCTTCTGGAAGCAGCTTGATGTAGGTTATCCAGGCATGCCAGATGCAATGGTTCATCATGGGTTTTATACTGCATATTATAATACAACAGTGCGGCATGAGATCTTGGAATCTGTTCGGTGGGCAAGGAAGACATATGGAAGGCTACCTATAAATGTTGTAGGTCACTCGATGGGAGGGGCTTTAGCATCGTTTTGTGCCCTTGACCTCTCTGTTAAGTATGGATCGCAGGAAGTTCAACTCATGACTTTTGGACAGCCTCGGGTAGGCAATCCTTCTTTTGATGTGTACTTCAGTGACCAAGTCCCGAGAACAATCCGTGTGACCCATCAGAATGACATTGTCCCACACTTGCCACCATATTTTTGGTACCTTGGCGAGATGGACATATCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB683404             [                                                                                      GGATGGCGAGCTCGAGCACCGCCGCGGCGGCGCTGGTAGTGGCGGCGCTTCTGCTCTCGTCGTCTCCCTCACCGGCGGCGGCGGCCGCGGGACGAGGAGGAGAACTCAGGATGAAGCATTCTGATGGTGGCTATTCTTATAACCGCACTCTCGCCCATATTTTTGTGCAATATGCATCTGCTGTGTATACGTCTGACTTAACCTCACTTTTCGCGTGGACATGCCCAAGGTGTCAAAGTGACACAAAGGGTTTTGAGATGATAGAGATAATTGTAGATGTGGAGAACTGCTTACAGGCTTTTGTTGGAGTCGCCCCTGATCCACAATCCATACTCATTGCTTTTAGAGGCACACAAGAACACAGTGTCTCGAATTGGATTGAAGATCTCTTCTGGAAGCAGCTTGATGTAGGTTATCCAGGCATGCCAGATGCAATGGTTCATCATGGGTTTTATACTGCATATTATAATACAACAGTGCGGCATGAGATCTTGGAATCTGTTCGGTGGGCAAGGAAGACATATGGAAGGCTACCTATAAATGTTGTAGGTCACTCGATGGGAGGGGCTTTAGCATCGTTCTGTGCCCTTGACCTCTCTGTTAAGTATGGATCGCAGGAAGTTCAACTCATGACTTTTGGACAGCCTCGGGTAGGCAATCCTTCTTTTGCTGCGTACTTCAGTGACCAAGTCCCGAGAACAATCCGTGTGACCCATCAGAATGACATTGTCCCACACTTGCCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL C73880               [                                                                                                                                                                                                                                                                                                                                              GGTTTTGAGATGATAGAGATAATTGTAGATGTGGAGAACTGCTTACAGGCTTTTGTTGGAGTCGCCCCTGATCCACAATCCATACTCATTGCTTTTAGAGGCACACAAGAACACAGTGTCTCGAATTGGATTGAAGATCTCTTCTGGAAGCAGCTTGATGTAGGTTATCCAGGCATGCCAGATGCAATGGTTCATCATGGGTTTTATACTGCATATTATAATACAACAGTGCGGCATGAGATCTTGGAATCTGTTCGGTGGGCAAGGAAGACATATGGAAGGCTACCTATAAATGTTGTAGGTCACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CF311045             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GAATGACATTGTCCCACACTTGCCACCATATTTTTGCTACCTTGGCGA ATGGACATATCACCACTTCTCGAGAGAGGTTTGGCTTCATGAGACCATAGTAGGAAATGTAGTTACTAGGAATGAGACCATCTGTGATGGATCAGGCGAGGACCCAACATGCAGCAGATCGGTCTACGGCAGAAGTGTTGCAGATCATCTTGAATACTACGGTGTCTCACTACACGCTGATTCAAGGGGAACCTGTCAATTTGTGATTGGCTCAACCAACATGGGCATATGGTACCATTCTTGAAGTTGATAGAACCATCATCATGACAAGATATCCGCAAGAGTGGCACGCCGTGGAATCTATTTAACCCTTTGCCCGAGGGTAAATTGTATATAATTATTTTCCTTTTGTGCATATAGCTCATGTAATGTAGGTGTACTGGGTTCTCCAGGAGCTCTCCTGAGGATAAGGAGAGGTTTCATTTTTAATATGTGCCCCCCTTTACTCAAGTGAGAATTGTACATGGAAGCTCCATATGAACATTGTAGACACGCCTTTATTGATGTACATAGCAATATCAATGGAATAAATAAAAAAA                                                                                                                                                       ]
[+] EMBL CA754355             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CCATCTGTGATGGATCAGGCGAGGACCCAACATGCAGCAGATCGGTCTACGGCAGAAGTGTTGCAGATCATCTTGAATACTACGGTGTCTCACTACACGCTGATTCAAGGGGAACCTGTCAATTTGTGATTGGCTCAACCAACAT GGCATATGGTACCATTCTTGAAGTTGATAGAACCATCATCATGACAAGATATCCGCAAGAGTGGCACGCCGTGGAATCTATTTAACCCTTTGCCCGAGGGTAAATTGTATATAATTATTTTCCTTTTGTGCATATAGCTCATGTAATGTAGGTGTACTGGGTTCTCCAGGAGCTCTCCTGAGGATAAGGAGAGGTTTCATTTTTAATATGTGCCCCCCTTTACTCAAGTGAGAATTGTACATGGAAGCTCCATATGAACATTGTAGACACGCCTTTATTGATGTACATAGCANTATCAATGGAATAAATAATAGAAGGATTTGATGGTCCCNACCCCCCCACCAACACAGAACCAGCCAGCCGGGCTCGCGCCCTTCGTGTGGGCCCCGGTACCCCATTCTCTCGGGGGGGGCCCGGAACCCAATCCCCCCATTGGGGAAGGCTAAAAACGCCCCTCCTGGGCCCTC]




>consensus_8818#0
TCTACCCGTCTCCATTGGAGGTGGTGGGTGCGAGTTGGGAAAGGCGAGAGGGAGGGAGAT
GCTGCGAGAGAGGTCGTCGCGGAGGCGGATGGCGAGCTCGAGCACCGCCGCGGCGGCGCT
GGTAGTGGCGGCGCTTCTGCTCTCGTCGTCTCCCTCACCGGCGGCGGCGGCCGCGGGACG
AGGAGGAGAACTCAGGATGAAGCATTCTGATGGTGGCTATTCTTATAACCGCACTCTCGC
CCATATTTTTGTGCAATATGCATCTGCTGTGTATACGTCTGACTTAACCTCACTTTTCGC
GTGGACATGCCCAAGGTGTCAAAGTGACACAAAGGGTTTTGAGATGATAGAGATAATTGT
AGATGTGGAGAACTGCTTACAGGCTTTTGTTGGAGTCGCCCCTGATCCACAATCCATACT
CATTGCTTTTAGAGGCACACAAGAACACAGTGTCTCGAATTGGATTGAAGATCTCTTCTG
GAAGCAGCTTGATGTAGGTTATCCAGGCATGCCAGATGCAATGGTTCATCATGGGTTTTA
TACTGCATATTATAATACAACAGTGCGGCATGAGATCTTGGAATCTGTTCGGTGGGCAAG
GAAGACATATGGAAGGCTACCTATAAATGTTGTAGGTCACTCGATGGGAGGGGCTTTAGC
ATCGTTCTGTGCCCTTGACCTCTCTGTTAAGTATGGATCGCAGGAAGTTCAACTCATGAC
TTTTGGACAGCCTCGGGTAGGCAATCCTTCTTTTGCTGCGTACTTCAGTGACCAAGTCCC
GAGAACAATCCGTGTGACCCATCAGAATGACATTGTCCCACACTTGCCACCATATTTTTG
CTACCTTGGCGAATGGACATATCACCACTTCTCGAGAGAGGTTTGGCTTCATGAGACCAT
AGTAGGAAATGTAGTTACTAGGAATGAGACCATCTGTGATGGATCAGGCGAGGACCCAAC
ATGCAGCAGATCGGTCTACGGCAGAAGTGTTGCAGATCATCTTGAATACTACGGTGTCTC
ACTACACGCTGATTCAAGGGGAACCTGTCAATTTGTGATTGGCTCAACCAACATGGCATA
TGGTACCATTCTTGAAGTTGATAGAACCATCATCATGACAAGATATCCGCAAGAGTGGCA
CGCCGTGGAATCTATTTAACCCTTTGCCCGAGGGTAAATTGTATATAATTATTTTCCTTT
TGTGCATATAGCTCATGTAATGTAGGTGTACTGGGTTCTCCAGGAGCTCTCCTGAGGATA
AGGAGAGGTTTCATTTTTAATATGTGCCCCCCTTTACTCAAGTGAGAATTGTACATGGAA
GCTCCATATGAACATTGTAGACACGCCTTTATTGATGTACATAGCAATATCAATGGAATA
AATAATAGAAGGATTTGATGGTCCCNACCCCCCCACCAACACAGAACCAGCCAGCCGGGC
TCGCGCCCTTCGTGTGGGCCCCGGTACCCCATTCTCTCGGGGGGGGCCCGGAACCCAATC
CCCCCATTGGGGAAGGCTAAAAACGCCCCTCCTGGGCCCTC
clustalw multiple alignements is not computed in this case