cluster # 8825

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Oryza sativa
cluster # 8825 cluster # 8825 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8825#0 length = 1775 sequences # 6
consensusID : consensus_8825#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1775
fasta sequence
                              [CTAGGTCTCTTGTGCAAGAAAATTTAGCTGCTACAATGTGTGGATCTCCATCCTATATGGCGCCAGAAATTATGCGATGTGAGGATTACGATGCAAAGGCAGACTTGTGGAGTGTTGGTGTTATTCTTTTTCAGCTAGTCACAGGGAAATTGCCTTTTTATGGGGCTAATCTATTCAAGCTGAGGCAAAACATCCATGAATCTAACGGCGTTAAGTTCCCTAAAGAAATCAAGGATGATTTACATCCTGATTTCATTGACCTGTGCCGAGGGCTCCTACGTCTTGATCCAAAGAAGAGAATTTCTTTTGAGGGATTCTTCAATCACAAGTTTTTGTCAACAACTGGGTCGACCCTTTACTCTGGTGGAAGCATTCAAAGGAAAAGAGAGATTAGCAGTGAGCCCAATCATCCTGCTGATTTATTAAGGGATACATGCCAGATCATTTCTTCGGATGTCCTGAAAGATAAGTCTGAAAGCGTGGATTCTAGAAATTTGCAAGCATTTGATTCATGGGAATGGATTGAACGAGAATATGTACTTGTTCAGGCGAACTCTACTTCCACGGAAATTTTGTCTTCACTTGAAAAGTCAATGAAGGATGGTACAGGTGCAAAACCTGCCAGCTATGATAGGTCCACTGTTAAACGGTCTGCTTGGAACCAAAACAGAAATTCAGTCAGTAGAGGGGTTGCTATAAAAAGCAATGGATGCACCCCATTGTCTACTTCCCATGAATCAACAGCTGCAGAAAATCTGCTAAATCCACCTTATTGTTACACAAGGCTTCAACTCCTTAACCAGTATATTGTTGTTCTTACAGAACTTGCAGAGGAGAAGCTTTTTAAAGGGCTGGACTTGGAGGCACTATCTGTTGAACTTATAATATTAGCTATTTGGAACGAGGCCCTTAATGCATGTAGTTTATCCACGGATGCTACACATGATGGATTTTTTTTGACCCAAGCTCATGTCAATTTCCTGCCTAAGAATGACCATCGTCCATCTCGAAATGTAGTACAAGGATTGGATTTCACCAGGCTCGTTTCTGTCTGTTCCTGGGCTGAAAGTGGCTTTATCAAGGCATATGACCGTGCAGAGAAGATAT-CACATAGGTTG-CGGGACAACAATGATAACACCGAGATGCCAGATG-CAGTGGAGATCATATT-CCAGACAGCTTTAATATATGGAACAACTGGTGCTG-CAAAGGAAGTTTTGGGATACCAAAATAGATCGGTGGCGCTATACTCAAAAGCAATCATCTTGCTCACATTTGTATTGCAAGAAG-CAACTAATTTGCCACTGAATCCGCCGTTTTCCCTTTCAT-CATCTGAT-CAGCAACGTATCCATAGGTACATAGCTAATTTGAGGAGCCATCTATGCAGTGCCCAGCTGACCGGACAACAGGAGAGATATGTCCAGAACTAACTTTTACATGGGAAATATTGGTGCACAAAGAAGTGAAAGTTAAATTGATTCCGTGGTAAACTTCAAGCAAGCTTTGTTTTGTTCCCCACGAGTATTAGTCTTTGCCTCCAAC-TTTTTTTTGTCTAGGAGATGCTTACTTGGGGGAACTTTTGTAATGTTTTGTTTGCATGATCATAGTCCATGTGTTCTTTTTGTATATAATATATAATAACACTT-CTAAGTTGTACAGTTATTTGCCATAGAACTGAAATGACCTCTTGGCTCTGTATATAAGTAGCATGTAAAAAGAGCAAATAGTTTTTTATTTTTCCAAGTCTTAAAACTGCTTTGCCTACTAAAAAAAAAAGA]

[+] EMBL AK101458             [CTAGGTCTCTTGTGCAAGAAAATTTAGCTGCTACAATGTGTGGATCTCCATCCTATATGGCGCCAGAAATTATGCGATGTGAGGATTACGATGCAAAGGCAGACTTGTGGAGTGTTGGTGTTATTCTTTTTCAGCTAGTCACAGGGAAATTGCCTTTTTATGGGGCTAATCTATTCAAGCTGAGGCAAAACATCCATGAATCTAACGGCGTTAAGTTCCCTAAAGAAATCAAGGATGATTTACATCCTGATTTCATTGACCTGTGCCGAGGGCTCCTACGTCTTGATCCAAAGAAGAGAATTTCTTTTGAGGGATTCTTCAATCACAAGTTTTTGTCAACAACTGGGTCGACCCTTTACTCTGGTGGAAGCATTCAAAGGAAAAGAGAGATTAGCAGTGAGCCCAATCATCCTGCTGATTTATTAAGGGATACATGCCAGATCATTTCTTCGGATGTCCTGAAAGATAAGTCTGAAAGCGTGGATTCTAGAAATTTGCAAGCATTTGATTCATGGGAATGGATTGAACGAGAATATGTACTTGTTCAGGCGAACTCTACTTCCACGGAAATTTTGTCTTCACTTGAAAAGTCAATGAAGGATGGTACAGGTGCAAAACCTGCCAGCTATGATAGGTCCACTGTTAAACGGTCTGCTTGGAACCAAAACAGAAATTCAGTCAGTAGAGGGGTTGCTATAAAAAGCAATGGATGCACCCCATTGTCTACTTCCCATGAATCAACAGCTGCAGAAAATCTGCTAAATCCACCTTATTGTTACACAAGGCTTCAACTCCTTAACCAGTATATTGTTGTTCTTACAGAACTTGCAGAGGAGAAGCTTTTTAAAGGGCTGGACTTGGAGGCACTATCTGTTGAACTTATAATATTAGCTATTTGGAACGAGGCCCTTAATGCATGTAGTTTATCCACGGATGCTACACATGATGGATTTTTTTTGACCCAAGCTCATGTCAATTTCCTGCCTAAGAATGACCATCGTCCATCTCGAAATGTAGTACAAGGATTGGATTTCACCAGGCTCGTTTCTGTCTGTTCCTGGGCTGAAAGTGGCTTTATCAAGGCATATGACCGTGCAGAGAAGATAT CACATAGGTTG CGGGACAACAATGATAACACCGAGATGCCAGATG CAGTGGAGATCATATT CCAGACAGCTTTAATATATGGAACAACTGGTGCTG CAAAGGAAGTTTTGGGATACCAAAATAGATCGGTGGCGCTATACTCAAAAGCAATCATCTTGCTCACATTTGTATTGCAAGAAG CAACTAATTTGCCACTGAATCCGCCGTTTTCCCTTTCAT CATCTGAT CAGCAACGTATCCATAGGTACATAGCTAATTTGAGGAGCCATCTATGCAGTGCCCAGCTGACCGGACAACAGGAGAGATATGTCCAGAACTAACTTTTACATGGGAAATATTGGTGCACAAAGAAGTGAAAGTTAAATTGATTCCGTGGTAAACTTCAAGCAAGCTATGTTTTGTTCCCCACGAGTATTAGTCTTTGCCTCCAAC TTTTTTTTGTCTAGGAGATGCTTACTTGGGGGAACTTTTGTAATGTTTTGTTTGCATGATCATAGTCCATGTGTTCTTTTTGTATATAATATATAATAACACTT CTAAGTTGTACAGTTATTTGCCATAGAACTGAAATGACCTCTTGGCTCTGTATATAAGTAGCATGTAAAAAGAGCAAATAGTTTTTTATTTTTCCAAGTCTTAAAACTGCT                     ]
[+] EMBL AK060784             [                                                                                              AAAGGCAGACTTGTGGAGTGTTGGTGTTATTCTTTTTCAGCTAGTCACAGGGAAATTGCCTTTTTATGGGGCTAATCTATTCAAGCTGAGGCAAAACATCCATGAATCTAACGGCGTTAAGTTCCCTAAAGAAATCAAGGATGATTTACATCCTGATTTCATTGACCTGTGCCGAGGGCTCCTACGTCTTGATCCAAAGAAGAGAATTTCTTTTGAGGAATTCTTCAATCACAAGTTTTTGTCAACAACTGGGTCGACCCTTTACTCTGGTGGAAGCATTCAAAGGAAAAGAGAGATTAGCAGTGAGCCCAATCATCCTGCTGATTTATTAAGGGATACATGCCAGATCATTTCTTCGGATGTCCTGAAAGATAAGTCTGAAAGCGTGGATTCTAGAAATTTGCAAGCATTTGATTCATGGGAATGGATTGAACGAGAATATGTACTTGTTCAGGCGAACTCTACTTCCACGGAAATTTTGTCTTCACTTGAAAAGTCAATGAAGGATGGTACAGGTGCAAAACCTGCCAGCTATGATAGGTCCACTGTTAAACGGTCTGCTTGGAACCAAAACAGAAATTCAGTCAGTAGAGGGGTTGCTATAAAAAGCAATGGATGCACCCCATTGTCTACTTCCCATGAATCAACAGCTGCAGAAAATCTGCTAAATCCACCTTATTGTTACACAAGGCTTCAACTCCTTAACCAGTATATTGTTGTTCTTACAGAACTTGCAGAGGAGAAGCTTTTTAAAGGGCTGGACTTGGAGGCACTATCTGTTGAACTTATAATATTAGCTATTTGGAACGAGGCCCTTAATGCATGTAGTTTATCCACGGATGCTACACATGATGGATTTTTTTTGACCCAAGCTCATGTCAATTTCCTGCCTAAGAATGACCATCGTCCATCTCGAAATGTAGTACAAGGATTGGATTTCACCAGGCTCGTTTCTGTCTGTTCCTGGGCTGAAAGTGGCTTTATCAAGGCATATGACCGTGCAGAGAAGATAT CACATAGGTTG CGGGACAACAATGATAACACCGAGATGCCAGATG CAGTGGAGATCATATT CCAGACAGCTTTAATATATGGAACAACTGGTGCTG CAAAGGAAGTTTTGGGATACCAAAATAGATCGGTGGCGCTATACTCAAAAGCAATCATCTTGCTCACATTTGTATTGCAAGAAG CAACTAATTTGCCACTGAATCCGCCGTTTTCCCTTTCAT CATCTGAT CAGCAACGTATCCATAGGTACATAGCTAATTTGAGGAGCCATCTATGCAGTGCCCAGCTGACCGGACAACAGGAGAGATATGTCCAGAACTAACTTTTACATGGGAAATATTGGTGCACAAAGAAGTGAAAGTTAAATTGATTCCGTGGTAAACTTCAAGCAAGCTTTGTTTTGTTCCCCACGAGTATTAGTCTTTGCCTCCAACTTTTTTTTTGTCTAGGAGATGCTTACTTGGGGGAACTTTTGTAATGTTTTGTTTGCATGATCATAGTCCATGTGTTCTTTTTGTATATAATATATAATAACACTT CTAAGTTGTACAGTTATTTGCCATAGAACTGAAATGACCTCTTGGCTCTGTATATAAGTAGCATGTAAAAAGAGCAAATAGTTTTTTATTTTTCCAAGTCTTAAAACTGCT                     ]
[-] EMBL CB632290             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CATGTAGTTTATCCACGGATGCTACACATGATGGATTTTTTTTGACCCAAGCTCATGTCAATTTCCTGCCTAAGAATGACCATCGTCCATCTCGAAATGTAGTACAAGGATTGGATTTCACCAGGCTCGTTTCTGTCTGTTCCTGGGCTGAAAGTGGCTTTATCAAGGCATATGACCGTGCAGAGAAGATAT CACATAGGTTG CGGGACAACAATGATAACACCGAGATGCCAGATG CAGTGGAGATCATATT CCAGACAGCTTTAATATATGGAACAACTGGTGCTG CAAAGGAAGTTTTGGGATACCAAAATAGATCGGTGGCGCTATACTCAAAAGCAATCATCTTGCTCACATTTGTATTGCAAGAAG CAACTAATTTGCCACTGAATCCGCCGTTTTCCCTTTCAT CATCTGAT CAGCAACGTATCCATAGGTACATAGCTAATTTGAGGAGCCATCTATGCAGTGCCCAGCTGACCGGACAACAGGAGAGATATGTCCAGAACTAACTTTTACATGGGAAATATTGGTGCACAAAGAAGTGAAAGTTAAATTGATTCCGTGGTAAACTTCAAGCAAGCTTTGTTTTGTTCCCCACGAGTATTAGTCTTTGCCTCCAAC TTTTTTTTGTCTAGGAGATGCTTACTTGGGGGAACTTTTGTAATGTTTTGTTTGCATGATCATAGTCCATGTGTTCTTTTTGTATATAATATATAATAACACTT CTAAGTTGTACAGTTATTTGCCATAGAACTGAAATGACCTCTTGGCTCTGTATATAAGTAGCATG                                                                   ]
[-] EMBL CB673415             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTATCCACGGATGCTACACATGATGGATTTTTTTTGACCCAAGCTCATGTCAATTTCCTGCNTAAGAATGACCATCGTCCATCTCGAAATGTAGTACAAGGATTGGATTTCACCAGGCTCGTTTCTGTCTGTTCCTGGGCTGAAAGTGGCTTTATCAAGGCATATGACCGTGCAGAGAAGATAT CACATAGGTTG CGGGACAACAATGATAACACCGAGATGCCAGATG CAGTGGAGATCATATT CCAGACAGCTTTAATATATGGAACAACTGGTGCTG CAAAGGAAGTTTTGGGATACCAAAATAGATCGGTGGCGCTATACTCAAAAGCAATCATCTTGCTCACATTTGTATTGCAAGAAG CAACTAATTTGCCACTGAATCCGCCGTTTTCCCTTTCAT CATCTGAT CAGCAACGTATCCATAGGTACATAGCTAATTTGAGGAGCCATCTATGCAGTGCCCAGCTGACCGGACAACAGGAGAGATATGTCCAGAACTAACTTTTACATGGGAAATATTGGTGCACAAAGAAGTGAAAGTTAAATTGATTCCGTGGTAAACTTCAAGCAAGCTTTGTTTTGTTCCCCACGAGTATTAGTCTTTGCCTCCAAC TTTTTTTTGTCTAGGAGATGCTTACTTGGGGGAACTTTTGTAATGTTTTGTTTGCATGATCATAGTCCATGTGTTCTTTTTGTATATAATATATAATAACACTT CTAAGTTGTACAGTTATTTGCCATAGAACTGAAATGACCTCTTGGCTCTGTATATAAGTAGCATGTAAAAAGAGCAAATAGTTTTTTATTTTTCCAAGTCTTAAAACTGCTTTGCCTACTAAAAAAAAAAGA]
[-] EMBL CB620763             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CCTGCCTAAGAATGACCATCGTCCATCTGGAAATGTAGTACAAGGATTGGATTTCACCAGGCTCGTTTCTGTCTGTTCCTGGGCTGAAAGTGGCTTTATCAAGGCATATGACCGTGCAGAGAAGATAT CACATAGGTTG CGGGACAACAATGATAACACCGAGATGCCAGATG CAGTGGAGATCATATT CCAGACAGCTTTAATATATGGAACAACTGGTGCTG CAAAGGAAGTTTTGGGATACCAAAATAGATCGGTGGCGCTATACTCAAAAGCAATCATCTTGCTCACATTTGTATTGCAAGAAG CAACTAATTTGCCACTGAATCCGCCGTTTTCCCTTTCAT CATCTGAT CAGCAACGTATCCATAGGTACATAGCTAATTTGAGGAGCCATCTATGCAGTGCCCAGCTGACCGGACAACAGGAGAGATATGTCCAGAACTAACTTTTACATGGGAAATATTGGTGCACAAAGAAGTGAAAGTTAAATTGATTCCGTGGTAAACTTCAAGCAAGCTTTGTTTTGTTCCCCACGAGTATTAGTCTTTGCCTCCAAC TTTTTTTTGTCTAGGAGATGCTTACTTGGGGGAACTTTTGTAATGTTTTGTTTGCATGATCATAGTCCATGTGTTCTTTTTGTATATAATATGGAATAACACTTCCTAAGTTGTACAGTTATTTGCCATAGAACTGAAATTCCCTCTTGCCTCTGTATATttttagg                                                                      ]
[+] EMBL C98432               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAAGNTATCCACATAGGTTGCCGGGACAACATGGTTAACACCGAG TGCCCNATGCCAGTGGAGATCATATTCCCAGACAGCTTT ATATATGGAACAACTGGTGCTGCCAAAGGAAGTTTTGGGATACCAAAATAGATCGGTGGCGCTATACTCAAAAGCAATCATCTTGCTCACATTTGTATTGCAAGAAGCCAACTAATTTGCCACTGAATCCGCCGTTTTCCCTTTCATCCATCTGATCCAGCAACGTATCCATAGGTACATAGCTAATTTGAGGAGCCATCTATGCAGTGCCCAGCTGACCGGACAACAGGAGAGATATGTCCAGAACTAACTTTTACATGGGAAATATTGGTGCACAAAGAAGTGAAAGTTAAATTGATTCCGTGGTAAACTTCAAGCAAGCTTTGTTTTGTTCCCCACGAGTATTAGTCTTTGCCTCCAAC TTTTTTTTGTCTAGGAGATGCTTACTTGGGGGAACTTTTGTAATGTTTTGTTTGCATGATCATAGTCCATGTGTTCTTTTTGTATATAATATATAATAACACTT CTAAGTTGTACAGTTATTTGCCATAGAACTGAAATGACCTCTTGGCTCTGTATATAAGTAGCATGTAAAAAGAGCAAATAGTTTTTTAaaaaa                                       ]




>consensus_8825#0
CTAGGTCTCTTGTGCAAGAAAATTTAGCTGCTACAATGTGTGGATCTCCATCCTATATGG
CGCCAGAAATTATGCGATGTGAGGATTACGATGCAAAGGCAGACTTGTGGAGTGTTGGTG
TTATTCTTTTTCAGCTAGTCACAGGGAAATTGCCTTTTTATGGGGCTAATCTATTCAAGC
TGAGGCAAAACATCCATGAATCTAACGGCGTTAAGTTCCCTAAAGAAATCAAGGATGATT
TACATCCTGATTTCATTGACCTGTGCCGAGGGCTCCTACGTCTTGATCCAAAGAAGAGAA
TTTCTTTTGAGGGATTCTTCAATCACAAGTTTTTGTCAACAACTGGGTCGACCCTTTACT
CTGGTGGAAGCATTCAAAGGAAAAGAGAGATTAGCAGTGAGCCCAATCATCCTGCTGATT
TATTAAGGGATACATGCCAGATCATTTCTTCGGATGTCCTGAAAGATAAGTCTGAAAGCG
TGGATTCTAGAAATTTGCAAGCATTTGATTCATGGGAATGGATTGAACGAGAATATGTAC
TTGTTCAGGCGAACTCTACTTCCACGGAAATTTTGTCTTCACTTGAAAAGTCAATGAAGG
ATGGTACAGGTGCAAAACCTGCCAGCTATGATAGGTCCACTGTTAAACGGTCTGCTTGGA
ACCAAAACAGAAATTCAGTCAGTAGAGGGGTTGCTATAAAAAGCAATGGATGCACCCCAT
TGTCTACTTCCCATGAATCAACAGCTGCAGAAAATCTGCTAAATCCACCTTATTGTTACA
CAAGGCTTCAACTCCTTAACCAGTATATTGTTGTTCTTACAGAACTTGCAGAGGAGAAGC
TTTTTAAAGGGCTGGACTTGGAGGCACTATCTGTTGAACTTATAATATTAGCTATTTGGA
ACGAGGCCCTTAATGCATGTAGTTTATCCACGGATGCTACACATGATGGATTTTTTTTGA
CCCAAGCTCATGTCAATTTCCTGCCTAAGAATGACCATCGTCCATCTCGAAATGTAGTAC
AAGGATTGGATTTCACCAGGCTCGTTTCTGTCTGTTCCTGGGCTGAAAGTGGCTTTATCA
AGGCATATGACCGTGCAGAGAAGATATCACATAGGTTGCGGGACAACAATGATAACACCG
AGATGCCAGATGCAGTGGAGATCATATTCCAGACAGCTTTAATATATGGAACAACTGGTG
CTGCAAAGGAAGTTTTGGGATACCAAAATAGATCGGTGGCGCTATACTCAAAAGCAATCA
TCTTGCTCACATTTGTATTGCAAGAAGCAACTAATTTGCCACTGAATCCGCCGTTTTCCC
TTTCATCATCTGATCAGCAACGTATCCATAGGTACATAGCTAATTTGAGGAGCCATCTAT
GCAGTGCCCAGCTGACCGGACAACAGGAGAGATATGTCCAGAACTAACTTTTACATGGGA
AATATTGGTGCACAAAGAAGTGAAAGTTAAATTGATTCCGTGGTAAACTTCAAGCAAGCT
TTGTTTTGTTCCCCACGAGTATTAGTCTTTGCCTCCAACTTTTTTTTGTCTAGGAGATGC
TTACTTGGGGGAACTTTTGTAATGTTTTGTTTGCATGATCATAGTCCATGTGTTCTTTTT
GTATATAATATATAATAACACTTCTAAGTTGTACAGTTATTTGCCATAGAACTGAAATGA
CCTCTTGGCTCTGTATATAAGTAGCATGTAAAAAGAGCAAATAGTTTTTTATTTTTCCAA
GTCTTAAAACTGCTTTGCCTACTAAAAAAAAAAGA
clustalw multiple alignements is not computed in this case