These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8826#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2186 fasta sequence [CAAGAACCCTCACACACACAGCCACACTCCATCCCCAAGCTCGCGGGAAAAGCCAAAGCAGCAGCCAAAGAAATCCACCTTTTCTAGACAAAAATTTTAGACGAACCGCGAGACTGATGGCCGGCTTCCAAATCCGGCAGCCGGGCGCTTTCCCTCTCGATTCCCCGCTGCAGATGAGATGAGATGAGAGGAGAGGAAATCTCCAGGAAAATTTGGCAGGATAAATGGGTAGTAATTGATTGATTGGGGTGGTTAATGCCTTCCAAGATTGCTCCTCTGCTGCTGTGCTGCTAGGGTTGTGCGATTCGGCATGGGGACCAAACCAGAGAGGGGAGGGGGGGGGGGGGGGCATGACGACGACGACGCCCCCGTTGCTATAATTCCTTGCCCCGTTTCGCCAAATCCCTCGGGCTGTTGCCTCCTAACCCCGCAATCCCTCCTCGCCGGTTGGTGATCAATCCGGCTCCTGATTTGGAGTTTCTCTTGGGGACCCAGGGTGGCCGTTCCATGCCCGGTTTGCTCGTGCATTAATACTAGCCGCTTCTTGGATAGGAGGACAACTAGTAGTAGTTCTTCTCTCCTCTCGCTCGCTGTTCCTTGCCCCATTCTCTTGGCTTCTTCTTCTTCTTCTTC---TTCTTGTTGTGGTTGTGTGTTATGATAAGAGTTCTTCGCCGTTGAGATGGGTTGCTTTGGGTGCTTCTCGCCGGAGGTGGACGACGACCTCAAGCCATCCAAGCCCAATTACCACTCTTCTGACGAATCATCAGGCGCCGACGCGAGGAGAAAGGTCGCGCCGTTGGCGACGGATGGGGGGAACGGCTACGCGCACAGCTTCACCTTCAAGGATCTGTCAGTGGCGACCGGCTACTTCAACGAGGCGAATTTCATCGGAGAAGGTGGCTTTGGGAAGGTGTACAAAGGCAAGATCAATGGGCAGATGGTGGCAGTGAAGCAGCTCACCCGGGACGGCGTGCAGGGGAGGAACGAGTTCTTGGTGGAGGTGCTGATGCTGACCGTGCTCAACCATCCGCATCTCGTCAGTTTGGTCGGCTTCTGCGCGCAGGGTGACGAGAGGCTGCTGGTGTACGAGTACATGCCATTCGGCAGCTTGGAGAGCCATCTCTTCGATGTGCCTCTTGGCAAGCAGCCACTGGACTGGAATACACGCATGAGGATAGCTGTTGGAGTGGCCGAAGGGCTTTCGTATTTGCACAATGTGGCTGATCCGCCTATAATTTACCGTGACATGAAAGCAGCTAACATTCTGTTGGATGAGGACTACAGACCAAAGCTCTCTGATTTCGGACTAGCAAAAGTTGGACCAGTCGGTGACAGAACTCATGTCTCCACCAGGGTTATGGGAACTTATGGCTACTGTGCTCCTGACTATGTGGTGAGTGGTAAGCTTACCATGAAATCTGACATATACAGTTTTGGTGTTCTCCTGTTGGAACTGATCACCGGCAGAAGGATCTACGATGCTTCAAGGCCTAAACCAGAGCAGAGTTTACTAACATGGTCAAGACCATTTCTGCATGACAAGAGGAAATTCTACAGGCTCGCTGACCCAGCTCTGCACGGGTGCTATCCAACATCTGCACTAAATCAGTTGGTTGTGATCAGCATCATGTGCCTCCAAGATCAGCCCCACGTCCGCCCAATCATCTCTGATGTCGTAATCGGCCTGAACCATGTCGCAAGCCAGCCATATGTCCCTGAGCGCTCCTCAGTGTCGCTGAGTTCCCCAGCAAGGTGCGGGTCACCACAATATGCCGGCACGCCATCTAGAAGGCGAGGCGGCAGAAGAGTTGCTCAGTATGCATAGCCTAGACTATATCCTTGTCTCAAAAGAACAGCAAGATCTCAGTCTGGTGAGACGGGTAGATAGTTGAAACTGTCAAAAATGCCATATAGTCAAAGCCTTCTTGATTCAAGAACCGGTCTTTAGCAACCCGATTGACACAGTTTGCTGTGAGATTGGTGATAGTTTGAAGCTGACCATGATGACTGTTGTTCTTTCATGCCTTTCATTGTTTTCAGTTCCTTAATTCTGTTGCCAGTGTACATAGCATCATCGGTTGTGCTCTGCTTGGGCAGCAGCCATCAGACATGCATCAGTCCGGCCTGGAAGCATGGGGACAATGTACTTAATTGGGATTTTGATCAAGTTATTTA-A-TCATGTACAA] [+] EMBL AK102717 [CAAGAACCCTCACACACACAGCCACACTCCATCCCCAAGCTCGCGGGAAAAGCCAAAGCAGCAGCCAAAGAAATCCACCTTTTCTAGACAAAAATTTTAGACGAACCGCGAGACTGATGGCCGGCTTCCAAATCCGGCAGCCGGGCGCTTTCCCTCTCGATTCCCCGCTGCAGATGAGATGAGATGAGAGGAGAGGAAATCTCCAGGAAAATTTGGCAGGATAAATGGGTAGTAATTGATTGATTGGGGTGGTTAATGCCTTCCAAGATTGCTCCTCTGCTGCTGTGCTGCTAGGGTTGTGCGATTCGGCATGGGGACCAAACCAGAGAGGGGAGGGGGGGGGGGGGGGCATGACGACGACGACGCCCCCGTTGCTATAATTCCTTGCCCCGTTTCGCCAAATCCCTCGGGCTGTTGCCTCCTAACCCCGCAATCCCTCCTCGCCGGTTGGTGATCAATCCGGCTCCTGATTTGGAGTTTCTCTTGGGGACCCAGGGTGGCCGTTCCATGCCCGGTTTGCTCGTGCATTAATACTAGCCGCTTCTTGGATAGGAGGACAACTAGTAGTAGTTCTTCTCTCCTCTCGCTCGCTGTTCCTTGCCCCATTCTCTTGGCTTCTTCTTCTTCTTCTTC TTCTTGTTGTGGTTGTGTGTTATGATAAGAGTTCTTCGCCGTTGAGATGGGTTGCTTTGGGTGCTTCTCGCCGGAGGTGGACGACGACCTCAAGCCATCCAAGCCCAATTACCACTCTTCTGACGAATCATCAGGCGCCGACGCGAGGAGAAAGGTCGCGCCGTTGGCGACGGATGGGGGGAACGGCTACGCGCACAGCTTCACCTTCAAGGATCTGTCAGTGGCGACCGGCTACTTCAACGAGGCGAATTTCATCGGAGAAGGTGGCTTTGGGAAGGTGTACAAAGGCAAGATCAATGGGCAGATGGTGGCAGTGAAGCAGCTCACCCGGGACGGCGTGCAGGGGAGGAACGAGTTCTTGGTGGAGGTGCTGATGCTGACCGTGCTCAACCATCCGCATCTCGTCAGTTTGGTCGGCTTCTGCGCGCAGGGTGACGAGAGGCTGCTGGTGTACGAGTACATGCCATTCGGCAGCTTGGAGAGCCATCTCTTCGATGTGCCTCTTGGCAAGCAGCCACTGGACTGGAATACACGCATGAGGATAGCTGTTGGAGTGGCCGAAGGGCTTTCGTATTTGCACAATGTGGCTGATCCGCCTATAATTTACCGTGACATGAAAGCAGCTAACATTCTGTTGGATGAGGACTACAGACCAAAGCTCTCTGATTTCGGACTAGCAAAAGTTGGACCAGTCGGTGACAGAACTCATGTCTCCACCAGGGTTATGGGAACTTATGGCTACTGTGCTCCTGACTATGTGGTGAGTGGTAAGCTTACCATGAAATCTGACATATACAGTTTTGGTGTTCTCCTGTTGGAACTGATCACCGGCAGAAGGATCTACGATGCTTCAAGGCCTAAACCAGAGCAGAGTTTACTAACATGGTCAAGACCATTTCTGCATGACAAGAGGAAATTCTACAGGCTCGCTGACCCAGCTCTGCACGGGTGCTATCCAACATCTGCACTAAATCAGTTGGTTGTGATCAGCATCATGTGCCTCCAAGATCAGCCCCACGTCCGCCCAATCATCTCTGATGTCGTAATCGGCCTGAACCATGTCGCAAGCCAGCCATATGTCCCTGAGCGCTCCTCAGTGTCGCTGAGTTCCCCAGCAAGGTGCGGGTCACCACAATATGCCGGCACGCCATCTAGAAGGCGAGGCGGCAGAAGAGTTGCTCAGTATGCATAGCCTAGACTATATCCTTGTCTCAAAAGAACAGCAAGATCTCAGTCTGGTGAGACGGGTAGATAGTTGAAACTGTCAAAAATGCCATATAGTCAAAGCCTTCTTGATTCAAGAACCGGTCTTTAGCAACCCGATTGACACAGTTTGCTGTGAGATTGGTGATAGTTTGAAGCTGACCATGATGACTGTTGTTCTTTCATGCCTTTCATTGTTTTCAGTTCCTTAATTCTGTTGCCAGTGTACATAGCATCATCGGTTGTGCTCTGCTTGGGCAGCAGCCATCAGACATGCATCAGTCCGGCCTGGAAGCATGGGGACAATGTACTTAATTGGGATTTTGATCAAGTTATTTA A TCATGTA ] [+] EMBL AK105632 [ TAGTTCTTCTCTCCTCTCGCTCGCTGTTCCTTGCCCCATTCTCTTGGCTTCTTCTTCTTCTTCTTC TTCTTGTTGTGGTTGTGTGTTATGATAAGAGTTCTTCGCCGTTGAGATGGGTTGCTTTGGGTGCTTCTCGCCGGAGGTGGACGACGACCTCAAGCCATCCAAGCCCAATTACCACTCTTCTGACGAATCATCAGGCGCCGACGCGAGGAGAAAGGTCGCGCCGTTGGCGACGGATGGGGGGAACGGCTACGCGCACAGCTTCACCTTCAAGGATCTGTCAGTGGCGACCGGCTACTTCAACGAGGCGAATTTCATCGGAGAAGGTGGCTTTGGGAAGGTGTACAAAGGCAAGATCAATGGGCAGATGGTGGCAGTGAAGCAGCTCACCCGGGACGGCGTGCAGGGGAGGAACGAGTTCTTGGTGGAGGTGCTGATGCTGACCGTGCTCAACCATCCGCATCTCGTCAGTTTGGTCGGCTTCTGCGCGCAGGGTGACGAGAGGCTGCTGGTGTACGAGTACATGCCATTCGGCAGCTTGGAGAGCCATCTCTTCGATGTGCCTCTTGGCAAGCAGCCACTGGACTGGAATACACGCATGAGGATAGCTGTTGGAGTGGCCGAAGGGCTTTCGTATTTGCACAATGTGGCTGATCCGCCTATAATTTACCGTGACATGAAAGCAGCTAACATTCTGTTGGATGAGGACTACAGACCAAAGCTCTCTGATTTCGGACTAGCAAAAGTTGGACCAGTCGGTGACAGAACCCATGTCTCCACCAGGGTTATGGGAACTTATGGCTACTGTGCTCCTGACTATGTGGTGAGTGGTAAGCTTACCATGAAATCTGACATATACAGTTTTGGTGTTCTCCTGTTGGAACTGATCACCGGCAGAAGGATCTACGATGCTTCAAGGCCTAAACCAGAGCAGAGTTTACTAACATGGTCAAGACCATTTCTGCATGACAAGAGGAAATTCTACAGGCTCGCTGACCCAGCTCTGCACGGGTGCTATCCAACATCTGCACTAAATCAGTTGGTTGTGATCAGCATCATGTGCCTCCAAGATCAGCCCCACGTCCGCCCAATCATCTCTGATGTCGTAATCGGCCTGAACCATGTCGCAAGCCAGCCATATGTCCCTGAGCGCTCCTCAGTGTCGCTGAGTTCCCCAGCAAGGTGCGGGTCACCACAATATGCCGGCACGCCATCTAGAAGGCGAGGCGGCAGAAGAGTTGCTCAGTATGCATAGCCTAGACTATATCCTTGTCTCAAAAGAACAGCAAGATCTCAGTCTGGTGAGACGGGTAGATAGTTGAAACTGTCAAAAATGCCATATAGTCAAAGCCTTCTTGATTCAAGAACCGGTCTTTAGCAACCCGATTGACACAGTTTGCTGTGAGATTGGTGATAGTTTGAAGCTGACCATGATGACTGTTGTTCTTTCATGCCTTTCATTGTTTTCAGTTCCTTAATTCTGTTGCCAGTGTACATAGCATCATCGGTTGTGCTCTGCTTGGGCAGCAGCCATCAGACATGCATCAGTCCGGCCTGGAAGCATGGGGACAATGTACTTAATTGGGATTTTGATCAAGTTAT ] [+] EMBL CB633066 [ CGCTCGCTGTTCCTTGCCCCATTCTCTTGGCTTCTTCTTCTTCTTCTTCTTGTTGTTGTTGTGGTTGTGTGTTATGATAAGAGTTCTTCGCCGTTGAGATGGGTTGCTTTGGGTGCTTCTCGCCGGAGGTGGACGACGACCTCAAGCCATCCAAGCCCAATTACCACTCTTCTGACGAATCATCAGGCGCCGACGCGAGGAGAAAGGTCGCGCCGTTGGCGACGGATGGGGGGAACGGCTACGCGCACAGCTTCACCTTCAAGGATCTGTCAGTGGCGACCGGCTACTTCAACGAGGCGAATTTCATCGGAGAAGGTGGCTTTGGGAAGGTGTACAAAGGCAAGATCAATGGGCAGATGGTGGCAGTGAAGCAGCTCACCCGGGACGGCGTGCAGGGGAGGAACGAGTTCTTGGTGGAGGTGCTGATGCTGACCGTGCTCAACCATCCGCATCTCGTCAGTTTGGTCGGCTTCTGCGCGCAGGGTGACGAGAGGCTGCTGGTGTACGAGTACATGCCATTCGGCAGCTTGGAGAGCCATCTCTTCGATGTGCCTCTTGGCAAGCAGCCACTGGACTGGAATACACGCATGAGGATAGCTGTTGGAGTGGCCGAAGGGCTTTCGTATTTGCACAATGTGGCTGATCCGCCTATAATTTACCGTGACATGAAAGCAGCTAACATTCTGTTGGATGAGGACTACAGACCAAAGCTCTCTGATTTCGGACTAGCAAAAGTTGGACCAGTCGGTGACAGAACTCATGTCTCCACCAGGGTTATGGGAACTTATGGCTACTGTGCTCCTGACTATGTGGTGAGTGGTAAGCTTACCATGAAATCTGA ] [-] EMBL CA305771 [ CCATGAAATCTGACATATACAGTTTTGGTGTTCTCCTGTTGGAACTGATCACCGGCAGAAGGATCTACGATGCTTCAAGGCCTAAACCAGAGCAGAGTTTACTAACATGGTCAAGACCATTTCTGCATGACAAGAGGAAATTCTACAGGCTCGCTGACCCAGCTCTGCACGGGTGCTATCCAACATCTGCACTAAATCAGTTGGTTGTGATCAGCATCATGTGCCTCCAAGATCAGCCCCACGTCCGCCCAATCATCTCTGATGTCGTAATCGGCCTGAACCATGTCGCAAGCCAGCCATATGTCCCTGAGCGCTCCTCAGTGTCGCTGAGTTCCCCAGCAAGGTGCGGGTCACCACAATATGCCGGCACGCCATCTAGAAGGCGAGGCGGCAGAAGAGTTGCTCAGTATGCATAGCCTAGACTATATCCTTGTCTCAAAAGAACAGCAAGATCTCAGTCTGGTGAGACGGGTAGATAGTTGAAACTGTCAAAAATGCCATATAGTCAAAGCCTTCTTGATTCAAGAACCGGTCTTTAGCAACCCGATTGACACAGTTTGCTGTGAGATTGGTGATAGTTTGAAGCTGACCATGATGACTGTTGTTCTTTCATGCCTTTCATTGTTTTCAGTTCC ] [-] EMBL CA305720 [ CCATGAAATCTGACATATACAGTTTTGGTGTTCTCCTGTTGGAACTGATCACCGGCAGAAGGATCTACGATGCTTCAAGGCCTAAACCAGAGCAGAGTTTACTAACATGGTCAAGACCATTTCTGCATGACAAGAGGAAATTCTACAGGCTCGCTGACCCAGCTCTGCACGGGTGCTATCCAACATCTGCACTAAATCAGTTGGTTGTGATCAGCATCATGTGCCTCCAAGATCAGCCCCACGTCCGCCCAATCATCTCTGATGTCGTAATCGGCCTGAACCATGTCGCAAGCCAGCCATATGTCCCTGAGCGCTCCTCAGTGTCGCTGAGTTCCCCAGCAAGGTGCGGGTCACCACAATATGCCGGCACGCCATCTAGAAGGCGAGGCGGCAGAAGAGTTGCTCAGTATGCATAGCCTAGACTATATCCTTGTCTCAAAAGAACAGCAAGATCTCAGTCTGGTGAGACGGGTAGATAGTTGAAACTGTCAAAAATGCCATATAGTCAAAGCCTTCTTGATTCAAGAACCGGTCTTTAGCAACCCGATTGACACAGTTTGCTGTGAGATTGGTGATAGTTTGAAGCTGACCATGATGACTGTTGTTCTTTCATGCCTTTCATTGTTTTCAGTTCC ] [-] EMBL CB633067 [ GTTTTGGTGTTCTCCTGTTGGAACTGATCACCGGCAGAAGGATCTACGATGCTTCAAGGCCTAAACCAGAGCAGAGTTTACTAACATGGTCAAGACCATTTCTGCATGACAAGAGGAAATTCTACAGGCTCGCTGACCCAGCTCTGCACGGGTGCTATCCAACATCTGCACTAAATCAGTTGGTTGTGATCAGCATCATGTGCCTCCAAGATCAGCCCCACGTCCGCCCAATCATCTCTGATGTCGTAATCGGCCTGAACCATGTCGCAAGCCAGCCATATGTCCCTGAGCGCTCCTCAGTGTCGCTGAGTTCCCCAGCAAGGTGCGGGTCACCACAATATGCCGGCACGCCATCTAGAAGGCGAGGCGGCAGAAGAGTTGCTCAGTATGCATAGCCTAGACTATATCCTTGTCTCAAAAGAACAGCAAGATCTCAGTCTGGTGAGACGGGTAGATAGTTGAAACTGTCAAAAATGCCATATAGTCAAAGCCTTCTTGATTCAAGAACCGGTCTTTAGCAACCCGATTGACACAGTTTGCTGTGAGATTGGTGATAGTTTGAAGCTGACCATGATGACTGTTGTTCTTTCATGCCTTTCATTGTTTTCAGTTCCTTAATTCTGTTGCCAGTGTACATAGCATCATCGGTTGTGCTCTGCTTGGGCAGCAGCCATCAGACATGCATCAGTCCGGCCTGGAAGCATGGGGACAATGTACTTAATTGGGATTTTGATCAAGTTATTTAGAGTCATGTACAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||