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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8826#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2186 fasta sequence
[CAAGAACCCTCACACACACAGCCACACTCCATCCCCAAGCTCGCGGGAAAAGCCAAAGCAGCAGCCAAAGAAATCCACCTTTTCTAGACAAAAATTTTAGACGAACCGCGAGACTGATGGCCGGCTTCCAAATCCGGCAGCCGGGCGCTTTCCCTCTCGATTCCCCGCTGCAGATGAGATGAGATGAGAGGAGAGGAAATCTCCAGGAAAATTTGGCAGGATAAATGGGTAGTAATTGATTGATTGGGGTGGTTAATGCCTTCCAAGATTGCTCCTCTGCTGCTGTGCTGCTAGGGTTGTGCGATTCGGCATGGGGACCAAACCAGAGAGGGGAGGGGGGGGGGGGGGGCATGACGACGACGACGCCCCCGTTGCTATAATTCCTTGCCCCGTTTCGCCAAATCCCTCGGGCTGTTGCCTCCTAACCCCGCAATCCCTCCTCGCCGGTTGGTGATCAATCCGGCTCCTGATTTGGAGTTTCTCTTGGGGACCCAGGGTGGCCGTTCCATGCCCGGTTTGCTCGTGCATTAATACTAGCCGCTTCTTGGATAGGAGGACAACTAGTAGTAGTTCTTCTCTCCTCTCGCTCGCTGTTCCTTGCCCCATTCTCTTGGCTTCTTCTTCTTCTTCTTC---TTCTTGTTGTGGTTGTGTGTTATGATAAGAGTTCTTCGCCGTTGAGATGGGTTGCTTTGGGTGCTTCTCGCCGGAGGTGGACGACGACCTCAAGCCATCCAAGCCCAATTACCACTCTTCTGACGAATCATCAGGCGCCGACGCGAGGAGAAAGGTCGCGCCGTTGGCGACGGATGGGGGGAACGGCTACGCGCACAGCTTCACCTTCAAGGATCTGTCAGTGGCGACCGGCTACTTCAACGAGGCGAATTTCATCGGAGAAGGTGGCTTTGGGAAGGTGTACAAAGGCAAGATCAATGGGCAGATGGTGGCAGTGAAGCAGCTCACCCGGGACGGCGTGCAGGGGAGGAACGAGTTCTTGGTGGAGGTGCTGATGCTGACCGTGCTCAACCATCCGCATCTCGTCAGTTTGGTCGGCTTCTGCGCGCAGGGTGACGAGAGGCTGCTGGTGTACGAGTACATGCCATTCGGCAGCTTGGAGAGCCATCTCTTCGATGTGCCTCTTGGCAAGCAGCCACTGGACTGGAATACACGCATGAGGATAGCTGTTGGAGTGGCCGAAGGGCTTTCGTATTTGCACAATGTGGCTGATCCGCCTATAATTTACCGTGACATGAAAGCAGCTAACATTCTGTTGGATGAGGACTACAGACCAAAGCTCTCTGATTTCGGACTAGCAAAAGTTGGACCAGTCGGTGACAGAACTCATGTCTCCACCAGGGTTATGGGAACTTATGGCTACTGTGCTCCTGACTATGTGGTGAGTGGTAAGCTTACCATGAAATCTGACATATACAGTTTTGGTGTTCTCCTGTTGGAACTGATCACCGGCAGAAGGATCTACGATGCTTCAAGGCCTAAACCAGAGCAGAGTTTACTAACATGGTCAAGACCATTTCTGCATGACAAGAGGAAATTCTACAGGCTCGCTGACCCAGCTCTGCACGGGTGCTATCCAACATCTGCACTAAATCAGTTGGTTGTGATCAGCATCATGTGCCTCCAAGATCAGCCCCACGTCCGCCCAATCATCTCTGATGTCGTAATCGGCCTGAACCATGTCGCAAGCCAGCCATATGTCCCTGAGCGCTCCTCAGTGTCGCTGAGTTCCCCAGCAAGGTGCGGGTCACCACAATATGCCGGCACGCCATCTAGAAGGCGAGGCGGCAGAAGAGTTGCTCAGTATGCATAGCCTAGACTATATCCTTGTCTCAAAAGAACAGCAAGATCTCAGTCTGGTGAGACGGGTAGATAGTTGAAACTGTCAAAAATGCCATATAGTCAAAGCCTTCTTGATTCAAGAACCGGTCTTTAGCAACCCGATTGACACAGTTTGCTGTGAGATTGGTGATAGTTTGAAGCTGACCATGATGACTGTTGTTCTTTCATGCCTTTCATTGTTTTCAGTTCCTTAATTCTGTTGCCAGTGTACATAGCATCATCGGTTGTGCTCTGCTTGGGCAGCAGCCATCAGACATGCATCAGTCCGGCCTGGAAGCATGGGGACAATGTACTTAATTGGGATTTTGATCAAGTTATTTA-A-TCATGTACAA]
[+] EMBL AK102717 [CAAGAACCCTCACACACACAGCCACACTCCATCCCCAAGCTCGCGGGAAAAGCCAAAGCAGCAGCCAAAGAAATCCACCTTTTCTAGACAAAAATTTTAGACGAACCGCGAGACTGATGGCCGGCTTCCAAATCCGGCAGCCGGGCGCTTTCCCTCTCGATTCCCCGCTGCAGATGAGATGAGATGAGAGGAGAGGAAATCTCCAGGAAAATTTGGCAGGATAAATGGGTAGTAATTGATTGATTGGGGTGGTTAATGCCTTCCAAGATTGCTCCTCTGCTGCTGTGCTGCTAGGGTTGTGCGATTCGGCATGGGGACCAAACCAGAGAGGGGAGGGGGGGGGGGGGGGCATGACGACGACGACGCCCCCGTTGCTATAATTCCTTGCCCCGTTTCGCCAAATCCCTCGGGCTGTTGCCTCCTAACCCCGCAATCCCTCCTCGCCGGTTGGTGATCAATCCGGCTCCTGATTTGGAGTTTCTCTTGGGGACCCAGGGTGGCCGTTCCATGCCCGGTTTGCTCGTGCATTAATACTAGCCGCTTCTTGGATAGGAGGACAACTAGTAGTAGTTCTTCTCTCCTCTCGCTCGCTGTTCCTTGCCCCATTCTCTTGGCTTCTTCTTCTTCTTCTTC TTCTTGTTGTGGTTGTGTGTTATGATAAGAGTTCTTCGCCGTTGAGATGGGTTGCTTTGGGTGCTTCTCGCCGGAGGTGGACGACGACCTCAAGCCATCCAAGCCCAATTACCACTCTTCTGACGAATCATCAGGCGCCGACGCGAGGAGAAAGGTCGCGCCGTTGGCGACGGATGGGGGGAACGGCTACGCGCACAGCTTCACCTTCAAGGATCTGTCAGTGGCGACCGGCTACTTCAACGAGGCGAATTTCATCGGAGAAGGTGGCTTTGGGAAGGTGTACAAAGGCAAGATCAATGGGCAGATGGTGGCAGTGAAGCAGCTCACCCGGGACGGCGTGCAGGGGAGGAACGAGTTCTTGGTGGAGGTGCTGATGCTGACCGTGCTCAACCATCCGCATCTCGTCAGTTTGGTCGGCTTCTGCGCGCAGGGTGACGAGAGGCTGCTGGTGTACGAGTACATGCCATTCGGCAGCTTGGAGAGCCATCTCTTCGATGTGCCTCTTGGCAAGCAGCCACTGGACTGGAATACACGCATGAGGATAGCTGTTGGAGTGGCCGAAGGGCTTTCGTATTTGCACAATGTGGCTGATCCGCCTATAATTTACCGTGACATGAAAGCAGCTAACATTCTGTTGGATGAGGACTACAGACCAAAGCTCTCTGATTTCGGACTAGCAAAAGTTGGACCAGTCGGTGACAGAACTCATGTCTCCACCAGGGTTATGGGAACTTATGGCTACTGTGCTCCTGACTATGTGGTGAGTGGTAAGCTTACCATGAAATCTGACATATACAGTTTTGGTGTTCTCCTGTTGGAACTGATCACCGGCAGAAGGATCTACGATGCTTCAAGGCCTAAACCAGAGCAGAGTTTACTAACATGGTCAAGACCATTTCTGCATGACAAGAGGAAATTCTACAGGCTCGCTGACCCAGCTCTGCACGGGTGCTATCCAACATCTGCACTAAATCAGTTGGTTGTGATCAGCATCATGTGCCTCCAAGATCAGCCCCACGTCCGCCCAATCATCTCTGATGTCGTAATCGGCCTGAACCATGTCGCAAGCCAGCCATATGTCCCTGAGCGCTCCTCAGTGTCGCTGAGTTCCCCAGCAAGGTGCGGGTCACCACAATATGCCGGCACGCCATCTAGAAGGCGAGGCGGCAGAAGAGTTGCTCAGTATGCATAGCCTAGACTATATCCTTGTCTCAAAAGAACAGCAAGATCTCAGTCTGGTGAGACGGGTAGATAGTTGAAACTGTCAAAAATGCCATATAGTCAAAGCCTTCTTGATTCAAGAACCGGTCTTTAGCAACCCGATTGACACAGTTTGCTGTGAGATTGGTGATAGTTTGAAGCTGACCATGATGACTGTTGTTCTTTCATGCCTTTCATTGTTTTCAGTTCCTTAATTCTGTTGCCAGTGTACATAGCATCATCGGTTGTGCTCTGCTTGGGCAGCAGCCATCAGACATGCATCAGTCCGGCCTGGAAGCATGGGGACAATGTACTTAATTGGGATTTTGATCAAGTTATTTA A TCATGTA ]
[+] EMBL AK105632 [ TAGTTCTTCTCTCCTCTCGCTCGCTGTTCCTTGCCCCATTCTCTTGGCTTCTTCTTCTTCTTCTTC TTCTTGTTGTGGTTGTGTGTTATGATAAGAGTTCTTCGCCGTTGAGATGGGTTGCTTTGGGTGCTTCTCGCCGGAGGTGGACGACGACCTCAAGCCATCCAAGCCCAATTACCACTCTTCTGACGAATCATCAGGCGCCGACGCGAGGAGAAAGGTCGCGCCGTTGGCGACGGATGGGGGGAACGGCTACGCGCACAGCTTCACCTTCAAGGATCTGTCAGTGGCGACCGGCTACTTCAACGAGGCGAATTTCATCGGAGAAGGTGGCTTTGGGAAGGTGTACAAAGGCAAGATCAATGGGCAGATGGTGGCAGTGAAGCAGCTCACCCGGGACGGCGTGCAGGGGAGGAACGAGTTCTTGGTGGAGGTGCTGATGCTGACCGTGCTCAACCATCCGCATCTCGTCAGTTTGGTCGGCTTCTGCGCGCAGGGTGACGAGAGGCTGCTGGTGTACGAGTACATGCCATTCGGCAGCTTGGAGAGCCATCTCTTCGATGTGCCTCTTGGCAAGCAGCCACTGGACTGGAATACACGCATGAGGATAGCTGTTGGAGTGGCCGAAGGGCTTTCGTATTTGCACAATGTGGCTGATCCGCCTATAATTTACCGTGACATGAAAGCAGCTAACATTCTGTTGGATGAGGACTACAGACCAAAGCTCTCTGATTTCGGACTAGCAAAAGTTGGACCAGTCGGTGACAGAACCCATGTCTCCACCAGGGTTATGGGAACTTATGGCTACTGTGCTCCTGACTATGTGGTGAGTGGTAAGCTTACCATGAAATCTGACATATACAGTTTTGGTGTTCTCCTGTTGGAACTGATCACCGGCAGAAGGATCTACGATGCTTCAAGGCCTAAACCAGAGCAGAGTTTACTAACATGGTCAAGACCATTTCTGCATGACAAGAGGAAATTCTACAGGCTCGCTGACCCAGCTCTGCACGGGTGCTATCCAACATCTGCACTAAATCAGTTGGTTGTGATCAGCATCATGTGCCTCCAAGATCAGCCCCACGTCCGCCCAATCATCTCTGATGTCGTAATCGGCCTGAACCATGTCGCAAGCCAGCCATATGTCCCTGAGCGCTCCTCAGTGTCGCTGAGTTCCCCAGCAAGGTGCGGGTCACCACAATATGCCGGCACGCCATCTAGAAGGCGAGGCGGCAGAAGAGTTGCTCAGTATGCATAGCCTAGACTATATCCTTGTCTCAAAAGAACAGCAAGATCTCAGTCTGGTGAGACGGGTAGATAGTTGAAACTGTCAAAAATGCCATATAGTCAAAGCCTTCTTGATTCAAGAACCGGTCTTTAGCAACCCGATTGACACAGTTTGCTGTGAGATTGGTGATAGTTTGAAGCTGACCATGATGACTGTTGTTCTTTCATGCCTTTCATTGTTTTCAGTTCCTTAATTCTGTTGCCAGTGTACATAGCATCATCGGTTGTGCTCTGCTTGGGCAGCAGCCATCAGACATGCATCAGTCCGGCCTGGAAGCATGGGGACAATGTACTTAATTGGGATTTTGATCAAGTTAT ]
[+] EMBL CB633066 [ CGCTCGCTGTTCCTTGCCCCATTCTCTTGGCTTCTTCTTCTTCTTCTTCTTGTTGTTGTTGTGGTTGTGTGTTATGATAAGAGTTCTTCGCCGTTGAGATGGGTTGCTTTGGGTGCTTCTCGCCGGAGGTGGACGACGACCTCAAGCCATCCAAGCCCAATTACCACTCTTCTGACGAATCATCAGGCGCCGACGCGAGGAGAAAGGTCGCGCCGTTGGCGACGGATGGGGGGAACGGCTACGCGCACAGCTTCACCTTCAAGGATCTGTCAGTGGCGACCGGCTACTTCAACGAGGCGAATTTCATCGGAGAAGGTGGCTTTGGGAAGGTGTACAAAGGCAAGATCAATGGGCAGATGGTGGCAGTGAAGCAGCTCACCCGGGACGGCGTGCAGGGGAGGAACGAGTTCTTGGTGGAGGTGCTGATGCTGACCGTGCTCAACCATCCGCATCTCGTCAGTTTGGTCGGCTTCTGCGCGCAGGGTGACGAGAGGCTGCTGGTGTACGAGTACATGCCATTCGGCAGCTTGGAGAGCCATCTCTTCGATGTGCCTCTTGGCAAGCAGCCACTGGACTGGAATACACGCATGAGGATAGCTGTTGGAGTGGCCGAAGGGCTTTCGTATTTGCACAATGTGGCTGATCCGCCTATAATTTACCGTGACATGAAAGCAGCTAACATTCTGTTGGATGAGGACTACAGACCAAAGCTCTCTGATTTCGGACTAGCAAAAGTTGGACCAGTCGGTGACAGAACTCATGTCTCCACCAGGGTTATGGGAACTTATGGCTACTGTGCTCCTGACTATGTGGTGAGTGGTAAGCTTACCATGAAATCTGA ]
[-] EMBL CA305771 [ CCATGAAATCTGACATATACAGTTTTGGTGTTCTCCTGTTGGAACTGATCACCGGCAGAAGGATCTACGATGCTTCAAGGCCTAAACCAGAGCAGAGTTTACTAACATGGTCAAGACCATTTCTGCATGACAAGAGGAAATTCTACAGGCTCGCTGACCCAGCTCTGCACGGGTGCTATCCAACATCTGCACTAAATCAGTTGGTTGTGATCAGCATCATGTGCCTCCAAGATCAGCCCCACGTCCGCCCAATCATCTCTGATGTCGTAATCGGCCTGAACCATGTCGCAAGCCAGCCATATGTCCCTGAGCGCTCCTCAGTGTCGCTGAGTTCCCCAGCAAGGTGCGGGTCACCACAATATGCCGGCACGCCATCTAGAAGGCGAGGCGGCAGAAGAGTTGCTCAGTATGCATAGCCTAGACTATATCCTTGTCTCAAAAGAACAGCAAGATCTCAGTCTGGTGAGACGGGTAGATAGTTGAAACTGTCAAAAATGCCATATAGTCAAAGCCTTCTTGATTCAAGAACCGGTCTTTAGCAACCCGATTGACACAGTTTGCTGTGAGATTGGTGATAGTTTGAAGCTGACCATGATGACTGTTGTTCTTTCATGCCTTTCATTGTTTTCAGTTCC ]
[-] EMBL CA305720 [ CCATGAAATCTGACATATACAGTTTTGGTGTTCTCCTGTTGGAACTGATCACCGGCAGAAGGATCTACGATGCTTCAAGGCCTAAACCAGAGCAGAGTTTACTAACATGGTCAAGACCATTTCTGCATGACAAGAGGAAATTCTACAGGCTCGCTGACCCAGCTCTGCACGGGTGCTATCCAACATCTGCACTAAATCAGTTGGTTGTGATCAGCATCATGTGCCTCCAAGATCAGCCCCACGTCCGCCCAATCATCTCTGATGTCGTAATCGGCCTGAACCATGTCGCAAGCCAGCCATATGTCCCTGAGCGCTCCTCAGTGTCGCTGAGTTCCCCAGCAAGGTGCGGGTCACCACAATATGCCGGCACGCCATCTAGAAGGCGAGGCGGCAGAAGAGTTGCTCAGTATGCATAGCCTAGACTATATCCTTGTCTCAAAAGAACAGCAAGATCTCAGTCTGGTGAGACGGGTAGATAGTTGAAACTGTCAAAAATGCCATATAGTCAAAGCCTTCTTGATTCAAGAACCGGTCTTTAGCAACCCGATTGACACAGTTTGCTGTGAGATTGGTGATAGTTTGAAGCTGACCATGATGACTGTTGTTCTTTCATGCCTTTCATTGTTTTCAGTTCC ]
[-] EMBL CB633067 [ GTTTTGGTGTTCTCCTGTTGGAACTGATCACCGGCAGAAGGATCTACGATGCTTCAAGGCCTAAACCAGAGCAGAGTTTACTAACATGGTCAAGACCATTTCTGCATGACAAGAGGAAATTCTACAGGCTCGCTGACCCAGCTCTGCACGGGTGCTATCCAACATCTGCACTAAATCAGTTGGTTGTGATCAGCATCATGTGCCTCCAAGATCAGCCCCACGTCCGCCCAATCATCTCTGATGTCGTAATCGGCCTGAACCATGTCGCAAGCCAGCCATATGTCCCTGAGCGCTCCTCAGTGTCGCTGAGTTCCCCAGCAAGGTGCGGGTCACCACAATATGCCGGCACGCCATCTAGAAGGCGAGGCGGCAGAAGAGTTGCTCAGTATGCATAGCCTAGACTATATCCTTGTCTCAAAAGAACAGCAAGATCTCAGTCTGGTGAGACGGGTAGATAGTTGAAACTGTCAAAAATGCCATATAGTCAAAGCCTTCTTGATTCAAGAACCGGTCTTTAGCAACCCGATTGACACAGTTTGCTGTGAGATTGGTGATAGTTTGAAGCTGACCATGATGACTGTTGTTCTTTCATGCCTTTCATTGTTTTCAGTTCCTTAATTCTGTTGCCAGTGTACATAGCATCATCGGTTGTGCTCTGCTTGGGCAGCAGCCATCAGACATGCATCAGTCCGGCCTGGAAGCATGGGGACAATGTACTTAATTGGGATTTTGATCAAGTTATTTAGAGTCATGTACAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||