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Oryza sativa
cluster # 8831 cluster # 8831       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8831#0 length = 1869 sequences # 2  
consensus_8831#1 length = 1459 sequences # 4  

consensusID : consensus_8831#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1869
fasta sequence
                              [GTGCGTCCGCTCCGCTCTTGCGTTGCGCCTCCTTCCTCCTCCCCTCCGCTCCTCGCTTCAGATCCAAACCCTCCTCTAAAAAAAGGGGAAAAAGCCACCAAAACCCTAACCCTAAGCATCCCAATCCCCAAATCCCCCCGAAAACCCTAACCGGATCCCCCTTCCCCTCCCGCCGCCGCCATGGCGGGGTCCTCCGGCGGCGCCACCTCCTCCTCCTCCCGCAACAGCGTCGAACGATTCTACCTGCCTCCCCATTCCCGCCGCCAGCAGCAGCAGCGGCTGCGGAGCCCCACGTCCCCTTCACTGTCCCCGTCGCCGTCCCCGCGGTCGGGGAGGCACAAGGCGGCCGCCGCGGCGCCACCGGCGGTGGTGGCTGCGGCGGCGGTGGGCGCGGGTGTGCTGACGGACGGGGATAGCAGGGTGGATTCGGACGACTCCTCGTCGACGTCGTCCAAGCCTTCCGTGGCATCCACAGCGACTGCCACGACCACCGCGGCTGACGTGAATGTGACGGCGGTGGAGGAGAGTGGGAATTTGGAGAGGTTTCTCACCTCCACCACTCCCTCCGTGCCCTTCCAATACCTGCCCAAGACAAGCTTGAAAATGTGGAGGACTGGTGATTGTACAAATACATCACCATATTTCTGCCTTGAAGATCTTTGGGAATCTTTCAGGGAGTGGAGTGCTTATGGAGCTGGCGTTCCCCTGTTGCTAAATGGCAGTGACTCTGTAACACAGTATTACGTGCCATATCTGTCTGCTATCCAGTTGTATGCAGATCCA-TCAAGATCTGTTTCAAGAACCGGGCGCCTTGGGGATGAAAGTGATGGGGAATACCTGGATGCTAGCAGCGAGAGTAGCAGTGAAACTGATGTTGACCGATTAAGAG-TCTCATCCGTGGAAGCTACACATGGGATGGCAAATGGTAGTTTGCGAACTGATGATGCTGATGGTTATGCATCTGCAAGTTCTCCAATCTTTCAGTATATGGAGAGGGATCCCCCGTTTTGTAGAGAACCTCTGACAGACAAGGTATCAATTCTTGCTAGTAGATTTCCAGCTCTGAAGGCATTCAAAAGCTGTGATCTGCTGCCATCCAGTTGGATGTCTGTTGCATGAGGATGCCTACCAGTTGCAATGCCTAACAACAGGCATGCCTACTGTGCTGAAATTCAGCACGACATACAATCTGTGTAGAAGAGCATCACTGCTAATATGGTGTTGCTATGATTCTATACATTACTGGTTTCATCCTCGTGCTTCCCATTGCAGGTACCCCATATATAGAATTCCAACAGGGCCGACGTTGGAAGACCTTGATGCCTGTTTCTTGACATTCCATTGCCTAGCAACACCTTCTAAGGATAGCGATAGCACTACACCAGCATGCCCTGGTTTTGGTGGCATCAGCCCTTGCGCAAATGCAACTGGCAAGCTATCTTTGCCTGCCTTTGGACTGGCATCTTACAAACTTCGCAGCTCCATTTGGGCATCCGATGGGACCCAAGGACAGCGTGTCACCTCGCTGATGGAGGAGGCTGGCAACTGGCTCAGCTGCGTACAAGTAGAGCATCCAGATTTCCGTTTTTTCGTCTCCCGTTCCGGTACGTGGAGATGACTGTAAATGTTTGTTAGTGAAACATTGCCGTCTGAATTTTCAGCTGCCTTGAGCACATCTGCCTATGGCACATAGAGTATGATGATATGATGATGAATGCCCTCTTGTACGGGGGTTGTATCAGCCTACATGCTAACTTTTTTCCTGTCTCCAATAAGTTGTCTGGTGTAGCGGTGTAGGTAACCCTTTGTGGGAGAGTAAAGATGGAAAGGAAAATTGGAGACTTGTAGAACTTAAGAGGGGGAAAAAAA]

[+] EMBL AK073782             [GTGCGTCCGCTCCGCTCTTGCGTTGCGCCTCCTTCCTCCTCCCCTCCGCTCCTCGCTTCAGATCCAAACCCTCCTCTAAAAAAAGGGGAAAAAGCCACCAAAACCCTAACCCTAAGCATCCCAATCCCCAAATCCCCCCGAAAACCCTAACCGGATCCCCCTTCCCCTCCCGCCGCCGCCATGGCGGGGTCCTCCGGCGGCGCCACCTCCTCCTCCTCCCGCAACAGCGTCGAACGATTCTACCTGCCTCCCCATTCCCGCCGCCAGCAGCAGCAGCGGCTGCGGAGCCCCACGTCCCCTTCACTGTCCCCGTCGCCGTCCCCGCGGTCGGGGAGGCACAAGGCGGCCGCCGCGGCGCCACCGGCGGTGGTGGCTGCGGCGGCGGTGGGCGCGGGTGTGCTGACGGACGGGGATAGCAGGGTGGATTCGGACGACTCCTCGTCGACGTCGTCCAAGCCTTCCGTGGCATCCACAGCGACTGCCACGACCACCGCGGCTGACGTGAATGTGACGGCGGTGGAGGAGAGTGGGAATTTGGAGAGGTTTCTCACCTCCACCACTCCCTCCGTGCCCTTCCAATACCTGCCCAAGACAAGCTTGAAAATGTGGAGGACTGGTGATTGTACAAATACATCACCATATTTCTGCCTTGAAGATCTTTGGGAATCTTTCAGGGAGTGGAGTGCTTATGGAGCTGGCGTTCCCCTGTTGCTAAATGGCAGTGACTCTGTAACACAGTATTACGTGCCATATCTGTCTGCTATCCAGTTGTATGCAGATCCA TCAAGATCTGTTTCAAGAACCGGGCGCCTTGGGGATGAAAGTGATGGGGAATACCTGGATGCTAGCAGCGAGAGTAGCAGTGAAACTGATGTTGACCGATTAAGAG TCTCATCCGTGGAAGCTACACATGGGATGGCAAATGGTAGTTTGCGAACTGATGATGCTGATGGTTATGCATCTGCAAGTTCTCCAATCTTTCAGTATATGGAGAGGGATCCCCCGTTTTGTAGAGAACCTCTGACAGACAAGGTATCAATTCTTGCTAGTAGATTTCCAGCTCTGAAGGCATTCAAAAGCTGTGATCTGCTGCCATCCAGTTGGATGTCTGTTGCATGAGGATGCCTACCAGTTGCAATGCCTAACAACAGGCATGCCTACTGTGCTGAAATTCAGCACGACATACAATCTGTGTAGAAGAGCATCACTGCTAATATGGTGTTGCTATGATTCTATACATTACTGGTTTCATCCTCGTGCTTCCCATTGCAGGTACCCCATATATAGAATTCCAACAGGGCCGACGTTGGAAGACCTTGATGCCTGTTTCTTGACATTCCATTGCCTAGCAACACCTTCTAAGGATAGCGATAGCACTACACCAGCATGCCCTGGTTTTGGTGGCATCAGCCCTTGCGCAAATGCAACTGGCAAGCTATCTTTGCCTGCCTTTGGACTGGCATCTTACAAACTTCGCAGCTCCATTTGGGCATCCGATGGGACCCAAGGACAGCGTGTCACCTCGCTGATGGAGGAGGCTGGCAACTGGCTCAGCTGCGTACAAGTAGAGCATCCAGATTTCCGTTTTTTCGTCTCCCGTTCCGGTACGTGGAGATGACTGTAAATGTTTGTTAGTGAAACATTGCCGTCTGAATTTTCAGCTGCCTTGAGCACATCTGCCTATGGCACATAGAGTATGATGATATGATGATGAATGCCCTCTTGTACGGGGGTTGTATCAGCCTACATGCTAACTTTTTTCCTGTCTCCAATAAGTTGTCTGGTGTAGCGGTGTAGGTAACCCTTTGTGGGAGAGTAAAGATGGAAAGGAAAATTGGAGACTTGTAGAACTTAAGAGGGGGAAAAAAA]
[+] EMBL CA753044             [                                                                                                                                                                                                                   CCTCCTCCCGCAACAGCGTCGAACGATTCTACCTGCCTCCCCATTCCCGCCGCCAGCAGCAGCAGCGGCTGCGGAGCCCCACGTCCCCTTCACTGTCCCCGTCGCCGTCCCCGCGGTCGGGGAGGCACAAGGCGGCCGCCGCGGCGCCACCGGCGGTGGTGGCTGCGGCGGCGGTGGGCGCGGGTGTGCTGACGGACGGGGATAGCAGGGTGGATTCGGACGACTCCTCGTCGACGTCGTCCAAGCCTTCCGTGGCATCCACAGCGACTGCCACGACCACCGCGGCTGACGTGAATGTGACGGCGGTGGAGGAGAGTGGGAATCTGGAGAGGTTTCTCACCTCCACCACTCCCTCCGTGCCCTTCCAATACCTGCCCAAGACAAGCTTGAAAATGTGGAGGACTGGTGATTGTACAAATACATCACCATATTTCTGCCTTGAAGATCTTTGGGAATCTTTCAGGGAGTGGAGTGCTTATGGAGCTGGCGTTCCCCTGTNGCTAAATGGCAGTGACTCTGTAACACAGTATCACGTGCCATATCTGTCTGCTATTCAGTGGTATGCAGATCCACTC AGATCTGTNTCAAGAA CAGGCGCCNTGGNGATGANAGTGAT GGGAATA CTGNATGCTAGC GCGAGAGTAGC GTG AACTGATG TGACCGAT  AGAGTTCTCc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_8831#0 GTGCGTCCGCTCCGCTCTTGCGTTGCGCCTCCTTCCTCCTCCCCTCCGCTCCTCGCTTCA GATCCAAACCCTCCTCTAAAAAAAGGGGAAAAAGCCACCAAAACCCTAACCCTAAGCATC CCAATCCCCAAATCCCCCCGAAAACCCTAACCGGATCCCCCTTCCCCTCCCGCCGCCGCC ATGGCGGGGTCCTCCGGCGGCGCCACCTCCTCCTCCTCCCGCAACAGCGTCGAACGATTC TACCTGCCTCCCCATTCCCGCCGCCAGCAGCAGCAGCGGCTGCGGAGCCCCACGTCCCCT TCACTGTCCCCGTCGCCGTCCCCGCGGTCGGGGAGGCACAAGGCGGCCGCCGCGGCGCCA CCGGCGGTGGTGGCTGCGGCGGCGGTGGGCGCGGGTGTGCTGACGGACGGGGATAGCAGG GTGGATTCGGACGACTCCTCGTCGACGTCGTCCAAGCCTTCCGTGGCATCCACAGCGACT GCCACGACCACCGCGGCTGACGTGAATGTGACGGCGGTGGAGGAGAGTGGGAATTTGGAG AGGTTTCTCACCTCCACCACTCCCTCCGTGCCCTTCCAATACCTGCCCAAGACAAGCTTG AAAATGTGGAGGACTGGTGATTGTACAAATACATCACCATATTTCTGCCTTGAAGATCTT TGGGAATCTTTCAGGGAGTGGAGTGCTTATGGAGCTGGCGTTCCCCTGTTGCTAAATGGC AGTGACTCTGTAACACAGTATTACGTGCCATATCTGTCTGCTATCCAGTTGTATGCAGAT CCATCAAGATCTGTTTCAAGAACCGGGCGCCTTGGGGATGAAAGTGATGGGGAATACCTG GATGCTAGCAGCGAGAGTAGCAGTGAAACTGATGTTGACCGATTAAGAGTCTCATCCGTG GAAGCTACACATGGGATGGCAAATGGTAGTTTGCGAACTGATGATGCTGATGGTTATGCA TCTGCAAGTTCTCCAATCTTTCAGTATATGGAGAGGGATCCCCCGTTTTGTAGAGAACCT CTGACAGACAAGGTATCAATTCTTGCTAGTAGATTTCCAGCTCTGAAGGCATTCAAAAGC TGTGATCTGCTGCCATCCAGTTGGATGTCTGTTGCATGAGGATGCCTACCAGTTGCAATG CCTAACAACAGGCATGCCTACTGTGCTGAAATTCAGCACGACATACAATCTGTGTAGAAG AGCATCACTGCTAATATGGTGTTGCTATGATTCTATACATTACTGGTTTCATCCTCGTGC TTCCCATTGCAGGTACCCCATATATAGAATTCCAACAGGGCCGACGTTGGAAGACCTTGA TGCCTGTTTCTTGACATTCCATTGCCTAGCAACACCTTCTAAGGATAGCGATAGCACTAC ACCAGCATGCCCTGGTTTTGGTGGCATCAGCCCTTGCGCAAATGCAACTGGCAAGCTATC TTTGCCTGCCTTTGGACTGGCATCTTACAAACTTCGCAGCTCCATTTGGGCATCCGATGG GACCCAAGGACAGCGTGTCACCTCGCTGATGGAGGAGGCTGGCAACTGGCTCAGCTGCGT ACAAGTAGAGCATCCAGATTTCCGTTTTTTCGTCTCCCGTTCCGGTACGTGGAGATGACT GTAAATGTTTGTTAGTGAAACATTGCCGTCTGAATTTTCAGCTGCCTTGAGCACATCTGC CTATGGCACATAGAGTATGATGATATGATGATGAATGCCCTCTTGTACGGGGGTTGTATC AGCCTACATGCTAACTTTTTTCCTGTCTCCAATAAGTTGTCTGGTGTAGCGGTGTAGGTA ACCCTTTGTGGGAGAGTAAAGATGGAAAGGAAAATTGGAGACTTGTAGAACTTAAGAGGG GGAAAAAAA



consensusID : consensus_8831#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1459
fasta sequence
                              [GACGGGGATAGCAGGGTGGATTCGGACGACTCCTCGTCGACGTCGTCCAAGCCTTCCGTGGCATCCACAGCGACTGCCACGACCACCGCGGCTGACGTGAATGTGACGGCGGTGGAGGAGAGTGGGAATTTGGAGAGGTTTCTCACCTCCACCACTCCCTCCGTGCCCTTCCAATACCTGCCCAAGACAAGCTTGAAAATGTGGAGGACTGGTGATTGTACAAATACATCACCATATTTCTGCCTTGAAGATCTTTGGGAATCTTTCAGGGAGTGGAGTGCTTATGGAGCTGGCGTTCCCCTGTTGCTAAATGGCAGTGACTCTGTAACACAGTATTACGTGCCATATCTGTCTGCTATCCAGTTGTATGCAGATCCATCAAGATCTGTTTCAAGAACCAGGCGCCTTGGGGATGAAAGTGATGGGGAATACCTGGATGCTAGCAGCGAGAGTAGCAGTGAAACTGATGTTGACCGATTAAGAGTCTCATCCGTGGAAGCTACACATGGGATGGCAAATGGTAGTTTGCGAACTGATGATGCTGATGGTTATGCATCTGCAAGTTCTCCAATCTTTCAGTATATGGAGAGGGATCCCCCGTTTTGTAGAGAACCTCTGACAGACAAGGTATCAATTCTTGCTAGTAGATTTCCAGCTCTGAAGGCATTCAAAAGCTGTGATCTGCTGCCATCCAGTTGGATGTCTGTTGCATGGTACCCCATATATAGAATTCCAACAGGGCCGACGTTGGAAGACCTTGATGCCTGTTTCTTGACATTCCATTGCCTAGCAACACCTTCTAAGGATAGCGATAGCACTACACCAGCATGCCCTGGTTTTGGTGGCATCAGCCCTTGCGCAAATGCAACTGGCAAGCTATCTTTGCCTGCCTTTGGACTGGCATCTTACAAACTTCGCAGCTCCATTTGGGCATCCGATGGGACCCAAGGACAGCGTGTCACCTCGCTGATGGAGGAGGCTGGCAACTGGCTCAGCTGCGTACAAGTAGAGCATCCAGATTTCCGTTTTTTCGTCTCCCGTTCCGGTACGTGGAGATGACTGTAAATGTTTGTTAGTGAAACATTGCCGTCTGAATTTTCAGCTGCCTTGAGCACATCTGCCTATGGCACATAGAGTATGATGATATGATGATGAATGCCCTCTTGTACGGGGGTTGTATCAGCCTACATGCTAACTTTTTTCCTGTCTCCAATAAGTTGTTTGGTGTAGCGGTGTAGGTAACCCTTTGTGGGGGAGTAAAGATGGAAAGGAAAATTGGAGACTTGTAGAACTTAAGAGGGGAAAAAAAAGAGAAAGAGCAAAAAAGAAAAGATTTTTTTGTTAGAATTAGCCAAAAAACTGTGTTTGCATGTAAATTGTTTTTTTTATCTCGGTTACTTTTGATCAACATAGTGAGATGATAGATCAGTTTGCACCTGTGCCTTGTACAAAAAAAAGA]

[+] EMBL CB622742             [GACGGGGATAGCAGGGTGGATTCGGACGACTCCTCGTCGACGTCGTCCAAGCCTTCCGTGGCATCCACAGCGACTGCCACGACCACCGCGGCTGACGTGAATGTGACGGCGGTGGAGGAGAGTGGGAATTTGGAGAGGTTTCTCACCTCCACCACTCCCTCCGTGCCCTTCCAATACCTGCCCAAGACAAGCTTGAAAATGTGGAGGACTGGTGATTGTACAAATACATCACCATATTTCTGCCTTGAAGATCTTTGGGAATCTTTCAGGGAGTGGAGTGCTTATGGAGCTGGCGTTCCCCTGTTGCTAAATGGCAGTGACTCTGTAACACAGTATTACGTGCCATATCTGTCTGCTATCCAGTTGTATGCAGATCCATCAAGATCTGTTTCAAGAACCAGGCGCCTTGGGGATGAAAGTGATGGGGAATACCTGGATGCTAGCAGCGAGAGTAGCAGTGAAACTGATGTTGACCGATTAAGAGTCTCATCCGTGGAAGCTACACATGGGATGGCAAATGGTAGTTTGCGAACTGATGATGCTGATGGTTATGCATCTGCAAGTTCTCCAATCTTTCAGTATATGGAGAGGGATCCCCCGTTTTGTAGAGAACCTCTGACAGACAAGGTATCAATTCTTGCTAGTAGATTTCCAGCTCTGAAGGCATTCAAAAGCTGTGATCTGCTGCCATCCAGTTGGATGTCTGTTGCATGGTACCCCATATATAGAATTCCAACAGGGCCGACGTTGGAAGACCTTGATGCCTGTTTCTTGACATTCCATTGCCTAGCAACACCTTCTAAAGATAGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB652311             [            AGGGCGGATTCGGACGACTCCTCGTCGACGTCGTCCAAGCCTTCCGTGGCATCCACAGCGACTGCCACGACCACCGCGGCTGACGTGAATGTGACGGCGGTGGAGGAGAGTGGGAATTTGGAGAGGTTTCTCACCTCCACCACTCCCTCCGTGCCCTTCCAATACCTGCCCAAGACAAGCTTGAAAATGTGGAGGACTGGTGATTGTACAAATACATCACCATATTTCTGCCTTGAAGATCTTTGGGAATCTTTCAGGGAGTGGAGTGCTTATGGAGCTGGCGTTCCCCTGTTGCTAAATGGCAGTGACTCTGTAACACAGTATTACGTGCCATATCTGTCTGCTATCCAGTTGTATGCAGATCCATCAAGATCTGTTTCAAGAACCAGGCGCCTTGGGGATGAAAGTGATGGGGAATACCTGGATGCTAGCAGCGAGAGTAGCAGTGAAACTGATGTTGACCGATTAAGAGTCTCATCCGTGGAAGCTACACATGGGATGGCAAATGGTAGTTTGCGAACTGATGATGCTGATGGTTATGCATCTGCAAGTTCTCCAATCTTTCAGTATATGGAGAGGGATCCCCCGTTTTGTAGAGAACCTCTGACAGACAAGGTATCAATTCTTGCTAGTAGATTTCCAGCTCTGAAGGCATTCAAAAGCTGTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB652312             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATCAATTCTTGCTAGTAGATTTCCAGCTCTGAAGGCATTCAAAAGCTGTGATCTGCTGCCATCCAGTTGGATGTCTGTTGCATGGTACCCCATATATAGAATTCCAACAGGGCCGACGTTGGAAGACCTTGATGCCTGTTTCTTGACATTCCATTGCCTAGCAACACCTTTTAAGGATAGCGATAGCACTACACCAGCATGCCCTGGTTTTGGTGGCATCAGCCCTTGCGCAAATGCAACTGGCAAGCTATCTTTGCCTGCCTTTGGACTGGCATCTTACAAACTTCGCAGCTCCATTTGGGCATCCGATGGGACCCAAGGACAGCGTGTCACCTCGCTGATGGAGGAGGCTGGCAACTGGCTCAGCTGCGTACAAGTAGAGCATCCAGATTTCCGTTTTTTCGTCTCCCGTTCCGGTACGTGGAGATGACTGTAAATGTTTGTTAGTGAAACATTGCCGTCTGAATTTTCAGCTGCCTTGAGCACATCTGCCTATGGCACATAGAGTATGATGATATGATGATGAATGCCCTCTTGTACGGGGGTTGTATCAGCCTACATGCTAACTTTTTTCCTGTCTCCAATAAGTTGTTTGGTGTAGCGGTGTAGGTAACCCTTTGTGGGGGAGTAAAGATGGAAAGGAAAATTGGAGACTTGTAGAACTTAAGAGGGGAAAAAAAAGAGAAAGAGCAAAAAAGAAAAGATTTTTTTGTTAGAATTAGCCAAAAAAC                                                                                                   ]
[-] EMBL CB622743             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTTGGATGTCTGTTGCATGGTACCCCATATATAGAATTCCAACAGGGCCGACGTTGGAAGACCTTGATGCCTGTTTCTTGACATTCCATTGCCTAGCAACACCTTCTAAGGATAGCGATAGCACTACACCAGCATGCCCTGGTTTTGGTGGCATCAGCCCTTGCGCAAATGCAACTGGCAAGCTATCTTTGCCTGCCTTTGGACTGGCATCTTACAAACTTCGCAGCTCCATTTGGGCATCCGATGGGACCCAAGGACAGCGTGTCACCTCGCTGATGGAGGAGGCTGGCAACTGGCTCAGCTGCGTACAAGTAGAGCATCCAGATTTCCGTTTTTTCGTCTCCCGTTCCGGTACGTGGAGATGACTGTAAATGTTTGTTAGTGAAACATTGCCGTCTGAATTTTCAGCTGCCTTGAGCACATCTGCCTATGGCACATAGAGTATGATGATATGATGATGAATGCCCTCTTGTACGGGGGTTGTATCAGCCTACATGCTAACTTTTTTCCTGTCTCCAATAAGTTGTCTGGTGTAGCGGTGTAGGTAACCCTTTGTGGGAGAGTAAAGATGGAAAGGAAAATTGGAGACTTGTAGAACTTAAGAGGGGGAAAAAAAGAGAAAGAGCAAAAAAAAAAAGATTTTTTTGTTAGAATTAGACAACATCATGTGTTTGCATGTAAATTGTTTTTTTTATCTCGGTTACTTTTGATCAACATAGTGAGATGATAGATCAGTTTGCACCTGTGCCTTGTACAAAAAAAAGA]


>consensus_8831#1 GACGGGGATAGCAGGGTGGATTCGGACGACTCCTCGTCGACGTCGTCCAAGCCTTCCGTG GCATCCACAGCGACTGCCACGACCACCGCGGCTGACGTGAATGTGACGGCGGTGGAGGAG AGTGGGAATTTGGAGAGGTTTCTCACCTCCACCACTCCCTCCGTGCCCTTCCAATACCTG CCCAAGACAAGCTTGAAAATGTGGAGGACTGGTGATTGTACAAATACATCACCATATTTC TGCCTTGAAGATCTTTGGGAATCTTTCAGGGAGTGGAGTGCTTATGGAGCTGGCGTTCCC CTGTTGCTAAATGGCAGTGACTCTGTAACACAGTATTACGTGCCATATCTGTCTGCTATC CAGTTGTATGCAGATCCATCAAGATCTGTTTCAAGAACCAGGCGCCTTGGGGATGAAAGT GATGGGGAATACCTGGATGCTAGCAGCGAGAGTAGCAGTGAAACTGATGTTGACCGATTA AGAGTCTCATCCGTGGAAGCTACACATGGGATGGCAAATGGTAGTTTGCGAACTGATGAT GCTGATGGTTATGCATCTGCAAGTTCTCCAATCTTTCAGTATATGGAGAGGGATCCCCCG TTTTGTAGAGAACCTCTGACAGACAAGGTATCAATTCTTGCTAGTAGATTTCCAGCTCTG AAGGCATTCAAAAGCTGTGATCTGCTGCCATCCAGTTGGATGTCTGTTGCATGGTACCCC ATATATAGAATTCCAACAGGGCCGACGTTGGAAGACCTTGATGCCTGTTTCTTGACATTC CATTGCCTAGCAACACCTTCTAAGGATAGCGATAGCACTACACCAGCATGCCCTGGTTTT GGTGGCATCAGCCCTTGCGCAAATGCAACTGGCAAGCTATCTTTGCCTGCCTTTGGACTG GCATCTTACAAACTTCGCAGCTCCATTTGGGCATCCGATGGGACCCAAGGACAGCGTGTC ACCTCGCTGATGGAGGAGGCTGGCAACTGGCTCAGCTGCGTACAAGTAGAGCATCCAGAT TTCCGTTTTTTCGTCTCCCGTTCCGGTACGTGGAGATGACTGTAAATGTTTGTTAGTGAA ACATTGCCGTCTGAATTTTCAGCTGCCTTGAGCACATCTGCCTATGGCACATAGAGTATG ATGATATGATGATGAATGCCCTCTTGTACGGGGGTTGTATCAGCCTACATGCTAACTTTT TTCCTGTCTCCAATAAGTTGTTTGGTGTAGCGGTGTAGGTAACCCTTTGTGGGGGAGTAA AGATGGAAAGGAAAATTGGAGACTTGTAGAACTTAAGAGGGGAAAAAAAAGAGAAAGAGC AAAAAAGAAAAGATTTTTTTGTTAGAATTAGCCAAAAAACTGTGTTTGCATGTAAATTGT TTTTTTTATCTCGGTTACTTTTGATCAACATAGTGAGATGATAGATCAGTTTGCACCTGT GCCTTGTACAAAAAAAAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8831#0      GTGCGTCCGCTCCGCTCTTGCGTTGCGCCTCCTTCCTCCTCCCCTCCGCTCCTCGCTTCA 60
consensus_8831#1      ------------------------------------------------------------
                                                                                  

consensus_8831#0      GATCCAAACCCTCCTCTAAAAAAAGGGGAAAAAGCCACCAAAACCCTAACCCTAAGCATC 120
consensus_8831#1      ------------------------------------------------------------
                                                                                  

consensus_8831#0      CCAATCCCCAAATCCCCCCGAAAACCCTAACCGGATCCCCCTTCCCCTCCCGCCGCCGCC 180
consensus_8831#1      ------------------------------------------------------------
                                                                                  

consensus_8831#0      ATGGCGGGGTCCTCCGGCGGCGCCACCTCCTCCTCCTCCCGCAACAGCGTCGAACGATTC 240
consensus_8831#1      ------------------------------------------------------------
                                                                                  

consensus_8831#0      TACCTGCCTCCCCATTCCCGCCGCCAGCAGCAGCAGCGGCTGCGGAGCCCCACGTCCCCT 300
consensus_8831#1      ------------------------------------------------------------
                                                                                  

consensus_8831#0      TCACTGTCCCCGTCGCCGTCCCCGCGGTCGGGGAGGCACAAGGCGGCCGCCGCGGCGCCA 360
consensus_8831#1      ------------------------------------------------------------
                                                                                  

consensus_8831#0      CCGGCGGTGGTGGCTGCGGCGGCGGTGGGCGCGGGTGTGCTGACGGACGGGGATAGCAGG 420
consensus_8831#1      ---------------------------------------------GACGGGGATAGCAGG 15
                                                                   ***************

consensus_8831#0      GTGGATTCGGACGACTCCTCGTCGACGTCGTCCAAGCCTTCCGTGGCATCCACAGCGACT 480
consensus_8831#1      GTGGATTCGGACGACTCCTCGTCGACGTCGTCCAAGCCTTCCGTGGCATCCACAGCGACT 75
                      ************************************************************

consensus_8831#0      GCCACGACCACCGCGGCTGACGTGAATGTGACGGCGGTGGAGGAGAGTGGGAATTTGGAG 540
consensus_8831#1      GCCACGACCACCGCGGCTGACGTGAATGTGACGGCGGTGGAGGAGAGTGGGAATTTGGAG 135
                      ************************************************************

consensus_8831#0      AGGTTTCTCACCTCCACCACTCCCTCCGTGCCCTTCCAATACCTGCCCAAGACAAGCTTG 600
consensus_8831#1      AGGTTTCTCACCTCCACCACTCCCTCCGTGCCCTTCCAATACCTGCCCAAGACAAGCTTG 195
                      ************************************************************

consensus_8831#0      AAAATGTGGAGGACTGGTGATTGTACAAATACATCACCATATTTCTGCCTTGAAGATCTT 660
consensus_8831#1      AAAATGTGGAGGACTGGTGATTGTACAAATACATCACCATATTTCTGCCTTGAAGATCTT 255
                      ************************************************************

consensus_8831#0      TGGGAATCTTTCAGGGAGTGGAGTGCTTATGGAGCTGGCGTTCCCCTGTTGCTAAATGGC 720
consensus_8831#1      TGGGAATCTTTCAGGGAGTGGAGTGCTTATGGAGCTGGCGTTCCCCTGTTGCTAAATGGC 315
                      ************************************************************

consensus_8831#0      AGTGACTCTGTAACACAGTATTACGTGCCATATCTGTCTGCTATCCAGTTGTATGCAGAT 780
consensus_8831#1      AGTGACTCTGTAACACAGTATTACGTGCCATATCTGTCTGCTATCCAGTTGTATGCAGAT 375
                      ************************************************************

consensus_8831#0      CCATCAAGATCTGTTTCAAGAACCGGGCGCCTTGGGGATGAAAGTGATGGGGAATACCTG 840
consensus_8831#1      CCATCAAGATCTGTTTCAAGAACCAGGCGCCTTGGGGATGAAAGTGATGGGGAATACCTG 435
                      ************************ ***********************************

consensus_8831#0      GATGCTAGCAGCGAGAGTAGCAGTGAAACTGATGTTGACCGATTAAGAGTCTCATCCGTG 900
consensus_8831#1      GATGCTAGCAGCGAGAGTAGCAGTGAAACTGATGTTGACCGATTAAGAGTCTCATCCGTG 495
                      ************************************************************

consensus_8831#0      GAAGCTACACATGGGATGGCAAATGGTAGTTTGCGAACTGATGATGCTGATGGTTATGCA 960
consensus_8831#1      GAAGCTACACATGGGATGGCAAATGGTAGTTTGCGAACTGATGATGCTGATGGTTATGCA 555
                      ************************************************************

consensus_8831#0      TCTGCAAGTTCTCCAATCTTTCAGTATATGGAGAGGGATCCCCCGTTTTGTAGAGAACCT 1020
consensus_8831#1      TCTGCAAGTTCTCCAATCTTTCAGTATATGGAGAGGGATCCCCCGTTTTGTAGAGAACCT 615
                      ************************************************************

consensus_8831#0      CTGACAGACAAGGTATCAATTCTTGCTAGTAGATTTCCAGCTCTGAAGGCATTCAAAAGC 1080
consensus_8831#1      CTGACAGACAAGGTATCAATTCTTGCTAGTAGATTTCCAGCTCTGAAGGCATTCAAAAGC 675
                      ************************************************************

consensus_8831#0      TGTGATCTGCTGCCATCCAGTTGGATGTCTGTTGCATGAGGATGCCTACCAGTTGCAATG 1140
consensus_8831#1      TGTGATCTGCTGCCATCCAGTTGGATGTCTGTTGCATG---------------------- 713
                      **************************************                      

consensus_8831#0      CCTAACAACAGGCATGCCTACTGTGCTGAAATTCAGCACGACATACAATCTGTGTAGAAG 1200
consensus_8831#1      ------------------------------------------------------------
                                                                                  

consensus_8831#0      AGCATCACTGCTAATATGGTGTTGCTATGATTCTATACATTACTGGTTTCATCCTCGTGC 1260
consensus_8831#1      ------------------------------------------------------------
                                                                                  

consensus_8831#0      TTCCCATTGCAGGTACCCCATATATAGAATTCCAACAGGGCCGACGTTGGAAGACCTTGA 1320
consensus_8831#1      ------------GTACCCCATATATAGAATTCCAACAGGGCCGACGTTGGAAGACCTTGA 761
                                  ************************************************

consensus_8831#0      TGCCTGTTTCTTGACATTCCATTGCCTAGCAACACCTTCTAAGGATAGCGATAGCACTAC 1380
consensus_8831#1      TGCCTGTTTCTTGACATTCCATTGCCTAGCAACACCTTCTAAGGATAGCGATAGCACTAC 821
                      ************************************************************

consensus_8831#0      ACCAGCATGCCCTGGTTTTGGTGGCATCAGCCCTTGCGCAAATGCAACTGGCAAGCTATC 1440
consensus_8831#1      ACCAGCATGCCCTGGTTTTGGTGGCATCAGCCCTTGCGCAAATGCAACTGGCAAGCTATC 881
                      ************************************************************

consensus_8831#0      TTTGCCTGCCTTTGGACTGGCATCTTACAAACTTCGCAGCTCCATTTGGGCATCCGATGG 1500
consensus_8831#1      TTTGCCTGCCTTTGGACTGGCATCTTACAAACTTCGCAGCTCCATTTGGGCATCCGATGG 941
                      ************************************************************

consensus_8831#0      GACCCAAGGACAGCGTGTCACCTCGCTGATGGAGGAGGCTGGCAACTGGCTCAGCTGCGT 1560
consensus_8831#1      GACCCAAGGACAGCGTGTCACCTCGCTGATGGAGGAGGCTGGCAACTGGCTCAGCTGCGT 1001
                      ************************************************************

consensus_8831#0      ACAAGTAGAGCATCCAGATTTCCGTTTTTTCGTCTCCCGTTCCGGTACGTGGAGATGACT 1620
consensus_8831#1      ACAAGTAGAGCATCCAGATTTCCGTTTTTTCGTCTCCCGTTCCGGTACGTGGAGATGACT 1061
                      ************************************************************

consensus_8831#0      GTAAATGTTTGTTAGTGAAACATTGCCGTCTGAATTTTCAGCTGCCTTGAGCACATCTGC 1680
consensus_8831#1      GTAAATGTTTGTTAGTGAAACATTGCCGTCTGAATTTTCAGCTGCCTTGAGCACATCTGC 1121
                      ************************************************************

consensus_8831#0      CTATGGCACATAGAGTATGATGATATGATGATGAATGCCCTCTTGTACGGGGGTTGTATC 1740
consensus_8831#1      CTATGGCACATAGAGTATGATGATATGATGATGAATGCCCTCTTGTACGGGGGTTGTATC 1181
                      ************************************************************

consensus_8831#0      AGCCTACATGCTAACTTTTTTCCTGTCTCCAATAAGTTGTCTGGTGTAGCGGTGTAGGTA 1800
consensus_8831#1      AGCCTACATGCTAACTTTTTTCCTGTCTCCAATAAGTTGTTTGGTGTAGCGGTGTAGGTA 1241
                      **************************************** *******************

consensus_8831#0      ACCCTTTGTGGGAGAGTAAAGATGGAAAGGAAAATTGGAGACTTGTAGAACTTAAGAGGG 1860
consensus_8831#1      ACCCTTTGTGGGGGAGTAAAGATGGAAAGGAAAATTGGAGACTTGTAGAACTTAAGAGGG 1301
                      ************ ***********************************************

consensus_8831#0      GGAAAAAAA--------------------------------------------------- 1869
consensus_8831#1      GAAAAAAAAGAGAAAGAGCAAAAAAGAAAAGATTTTTTTGTTAGAATTAGCCAAAAAACT 1361
                      * *******                                                   

consensus_8831#0      ------------------------------------------------------------
consensus_8831#1      GTGTTTGCATGTAAATTGTTTTTTTTATCTCGGTTACTTTTGATCAACATAGTGAGATGA 1421
                                                                                  

consensus_8831#0      --------------------------------------
consensus_8831#1      TAGATCAGTTTGCACCTGTGCCTTGTACAAAAAAAAGA 1459
                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)