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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8832#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2557 fasta sequence
[TCCTCTGCCTGCCGCCCCCAATCGCCGGCGATGCCGCGCCCCGCCGCCTCCTCCTCCAGCCGCCCTCCGCCGGAAGGCGAGCCGGCCTCGAGCCGCGCGACCTCCTCTGCGGAGTCCTCCATCGCGTCCCTCATCGACCGCGCCACCTCCACCACCTCCCCCTCCGTCGACCCGGCCCTCCTCCGCGCCATCAAGTCCGCCGCCCGCGCCTCCGACGGCGCCATCCGCGACGCCTTCCGGATCCTCCTCTCCCTCATGTCCAAGCCCCACGCCCACGTGAGTAAGCTCCTCCCTGCTGGTTTGATTCCCTTGACGAATTCGCCCAAACCCTAACTCGCCCAATCTTCAGGTGCGGCTGCTCGCGTTCATCATCGCCGACGAGCTCTTCATGCGCTCGAAGCTCTTCCGCTCCCTGCTGACCGACGTGCTGGACGGCTTCCTCCCGCTCGCCGTCGGCTTCCGCCGCGCCCACCCGCTCCCGCCGCCCGCTGCCTCCGCGACCCTGCTCCGCAAGGCCGCCGTCCAGGCGCTCGAGCGCTGGCACCACCTGTTCGGCGCGCACTACCGCCAGCTCCGCCTCGCCGTCGAGTACCTCAAGGAGTCCGCCCGGGTCCAGTTCCCCGGCCTCCGTGCCGCCGTCGAGGCTCGTGCCGCGCGGGAGGCTCGCACGCAGGAGATCTTAACTGCAAAGGTCGAGCAGTTGCGCCGAAACCTGGCAGCGATTAAGGCTGAAATCCGCTCCGCGATTGATGAGATCCGCAATGGGTTGGATATCATTCGCATCGAGAGTGAAAAATTTAACAATTATGCAAATGATGAGGATGAGGAGCAGGAGATTGCCTCTTTGGCGATGCGGAGTATTAGGATGGCTTCTTTGATGGCTGGGGAGTGGGTTCCTGAGACTCAGGAGAATGAAGCAGTTTTCGACGCGTTGAGGGAGTCATATCGGCTCCTTGTGTCAAAGCATTTGGTCACAGTTCAGGAATGGATATCTGTGCTGGTTAGGGTCAATCTCGCAGATAATCGTTTCAGAGATTCTGCTTTGAAGGAATTCATTGATGTTAAGAATGAAATACGAGCGGTGAGAAATCGGTGTAGTGAGCTTGGTCTTAATCTTGACAATGTCCATAGGCGGAAGGGTGTTCAGGAGGAAGAGGATGATGACTTTTGGGTTGAGGGGAATATTGAGGTTCCTAGCCCTGGTAGAGTAGGTACCAGTGCAGATGTTGCAAGTAGCAGCAAGGACACTAGAAAGGGAAAGAAGCCAGTAGGTGGCACGGATACTGATGATGGCAAGGCACCTAATGCTGGCAATAGTCCTCAAGAGCTGGATCCAGAGAGGGCAAAGCTGCATGCAGAAGCCCCTGTGCTGCCATGGAGCTCTGTTTTGGATCGTTGGGGTTCTAACAGGGATGCACTTGTAAACCAAAGGGGACTTGAGCTCGAGAGCCATTGGGGAAGGGTGGATAATGATGCTGTTATACCTGCTGCAAAGATTGCAGAATTAAATGTTCATAGTTCAATATATAGAGAAGATCCAGTTGAGATTCTACCATGCCTTGCACCTCTGAAGAAAGGAGGCCTTTGCCAGAGAAGAGATCTCAAGATATGCCCGTTTCATGGGCCTATTGTTCCACGAGATGCCGAAGGAAATCCAATTCATCAGAGTGATGGCCATTGTGATGCAGAAGGAAATCCAGTTGGGCAGACTGATGGCCATTATGATGCAGCAGTAAGTCCTATTGATCCGAATGAAGACAGTTCTGATGTAAGAGAAAATATGATTATGCCAGATGGAAGCAGTGATGGTGAATGTATTTATGAGTCCTCTCCTTCAAGAACGGCAAACATAAATAATGACATTAGCGACAGCGATGTAGGTCATGACCTCGGTAAAATTACAGTGGAGCAGTTGGCGAGACAGGCAGTGCAGAATGTCCGGAAAAGAGACAGGGATGACAAAAAAGCTCTGGAAAAAGCCCAACGAGCGAGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCATTCCCAAATCAATGGTAGTATAAGAAGCCTAATTTTTGCTGAATAGGTTGGTGAATCGTCATGATAAGAGTGAATCAATAATTCTTTCTGTGCGCAGTTTTCAGTTAACCACATGTCTTCTTGAGTTGCCCAGATACAAGTAAAATTGTAGGTTTTCATTGTGAAGTTTAGTTTTTGTACAGTACAGTAGATTGAATAAGTTTCTTTTATTTCTTTTGCATGTTCATTTTCCCTTTGTAAACATGTATATGTACCACTCCATACTTGCTGGATTAATAACTATATACGCTGAGGCTGCAGTTC]
[+] EMBL AK103308 [TCCTCTGCCTGCCGCCCCCAATCGCCGGCGATGCCGCGCCCCGCCGCCTCCTCCTCCAGCCGCCCTCCGCCGGAAGGCGAGCCGGCCTCGAGCCGCGCGACCTCCTCTGCGGAGTCCTCCATCGCGTCCCTCATCGACCGCGCCACCTCCACCACCTCCCCCTCCGTCGACCCGGCCCTCCTCCGCGCCATCAAGTCCGCCGCCCGCGCCTCCGACGGCGCCATCCGCGACGCCTTCCGGATCCTCCTCTCCCTCATGTCCAAGCCCCACGCCCACGTGAGTAAGCTCCTCCCTGCTGGTTTGATTCCCTTGACGAATTCGCCCAAACCCTAACTCGCCCAATCTTCAGGTGCGGCTGCTCGCGTTCATCATCGCCGACGAGCTCTTCATGCGCTCGAAGCTCTTCCGCTCCCTGCTGACCGACGTGCTGGACGGCTTCCTCCCGCTCGCCGTCGGCTTCCGCCGCGCCCACCCGCTCCCGCCGCCCGCTGCCTCCGCGACCCTGCTCCGCAAGGCCGCCGTCCAGGCGCTCGAGCGCTGGCACCACCTGTTCGGCGCGCACTACCGCCAGCTCCGCCTCGCCGTCGAGTACCTCAAGGAGTCCGCCCGGGTCCAGTTCCCCGGCCTCCGTGCCGCCGTCGAGGCTCGTGCCGCGCGGGAGGCTCGCACGCAGGAGATCTTAACTGCAAAGGTCGAGCAGTTGCGCCGAAACCTGGCAGCGATTAAGGCTGAAATCCGCTCCGCGATTGATGAGATCCGCAATGGGTTGGATATCATTCGCATCGAGAGTGAAAAATTTAACAATTATGCAAATGATGAGGATGAGGAGCAGGAGATTGCCTCTTTGGCGATGCGGAGTATTAGGATGGCTTCTTTGATGGCTGGGGAGTGGGTTCCTGAGACTCAGGAGAATGAAGCAGTTTTCGACGCGTTGAGGGAGTCATATCGGCTCCTTGTGTCAAAGCATTTGGTCACAGTTCAGGAATGGATATCTGTGCTGGTTAGGGTCAATCTCGCAGATAATCGTTTCAGAGATTCTGCTTTGAAGGAATTCATTGATGTTAAGAATGAAATACGAGCGGTGAGAAATCGGTGTAGTGAGCTTGGTCTTAATCTTGACAATGTCCATAGGCGGAAGGGTGTTCAGGAGGAAGAGGATGATGACTTTTGGGTTGAGGGGAATATTGAGGTTCCTAGCCCTGGTAGAGTAGGTACCAGTGCAGATGTTGCAAGTAGCAGCAAGGACACTAGAAAGGGAAAGAAGCCAGTAGGTGGCACGGATACTGATGATGGCAAGGCACCTAATGCTGGCAATAGTCCTCAAGAGCTGGATCCAGAGAGGGCAAAGCTGCATGCAGAAGCCCCTGTGCTGCCATGGAGCTCTGTTTTGGATCGTTGGGGTTCTAACAGGGATGCACTTGTAAACCAAAGGGGACTTGAGCTCGAGAGCCATTGGGGAAGGGTGGATAATGATGCTGTTATACCTGCTGCAAAGATTGCAGAATTAAATGTTCATAGTTCAATATATAGAGAAGATCCAGTTGAGATTCTACCATGCCTTGCACCTCTGAAGAAAGGAGGCCTTTGCCAGAGAAGAGATCTCAAGATATGCCCGTTTCATGGGCCTATTGTTCCACGAGATGCCGAAGGAAATCCAATTCATCAGAGTGATGGCCATTGTGATGCAGAAGGAAATCCAGTTGGGCAGACTGATGGCCATTATGATGCAGCAGTAAGTCCTATTGATCCGAATGAAGACAGTTCTGATGTAAGAGAAAATATGATTATGCCAGATGGAAGCAGTGATGGTGAATGTATTTATGAGTCCTCTCCTTCAAGAACGGCAAACATAAATAATGACATTAGCGACAGCGATGTAGGTCATGACCTCGGTAAAATTACAGTGGAGCAGTTGGCGAGACAGGCAGTGCAGAATGTCCGGAAAAGAGACAGGGATGACAAAAAAGCTCTGGAAAAAGCCCAACGAGCGAGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCATTCCCAAATCAATGGTAGTATAAGAAGCCTAATTTTTGCTGAATAGGTTGGTGAATCGTCATGATAAGAGTGAATCAATAATTCTTTCTGTGCGCAGTTTTCAGTTAACCACATGTCTTCTTGAGTTGCCCAGATACAAGTAAAATTGTAGGTTTTCATTGTGAAGTTTAGTTTTTGTACAGTACAGTAGATTGAATAAGTTTCTTTTATTTCTTTTGCATGTTCATTTTCCCTTTGTAAACATGTATATGTACCACTCCATACTTGCTGGATTAATAACTATATACGCTGAGG ]
[+] EMBL AK058474 [ GAGGATGAGGAGCAGGAGATTGCCTCTTTGGCGATGCGGAGTATTAGGATGGCTTCTTTGATGGCTGGGGAGTGGGTTCCTGAGACTCAGGAGAATGAAGCAGTTTTCGACGCGTTGAGGGAGTCATATCGGCTCCTTGTGTCAAAGCATTTGGTCACAGTTCAGGAATGGATATCTGTGCTGGTTAGGGTCAATCTCGCAGATAATCGTTTCAGAGATTCTGCTTTGAAGGAATTCATTGATGTTAAGAATGAAATACGAGCGGTGAGAAATCGGTGTAGTGAGCTTGGTCTTAATCTTGACAATGTCCATAGGCGGAAGGGTGTTCAGGAGGAAGAGGATGATGACTTTTGGGTTGAGGGGAATATTGAGGTTCCTAGCCCTGGTAGAGTAGGTACCAGTGCAGATGTTGCAAGTAGCAGCAAGGACACTAGAAAGGGAAAGAAGCCAGTAGGTGGCACGGATACTGATGATGGCAAGGCACCTAATGCTGGCAATAGTCCTCAAGAGCTGGATCCAGAGAGGGCAAAGCTGCATGCAGAAGCCCCTGTGCTGCCATGGAGCTCTGTTTTGGATCGTTGGGGTTCTAACAGGGATGCACTTGTAAACCAAAGGGGACTTGAGCTCGAGAGCCATTGGGGAAGGGTGGATAATGATGCTGTTATACCTGCTGCAAAGATTGCAGAATTAAATGTTCATAGTTCAATATATAGAGAAGATCCAGTTGAGATTCTACCATGCCTTGCACCTCTGAAGAAAGGAGGCCTTTGCCAGAGAAGAGATCTCAAGATATGCCCGTTTCATGGGCCTATTGTTCCACGAGATGCCGAAGGAAATCCAATTCATCAGAGTGATGGCCATTGTGATGCAGAAGGAAATCCAGTTGGGCAGACTGATGGCCATTATGATGCAGCAGTAAGTCCTATTGATCCGAATGAAGACAGTTCTGATGTAAGAGAAAATATGATTATGCCAGATGGAAGCAGTGATGGTGAATGTATTTATGAGTCCTCTCCTTCAAGAACGGCAAACATAAATAATGACATTAGCGACAGCGATGTAGGTCATGACCTCGGTAAAATTACAGTGGAGCAGTTGGCGAGACAGGCAGTGCAGAATGTCCGGAAAAGAGACAGGGATGACAAAAAAGCTCTGGAAAAAGCCCAACGAGCGAGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCATTCCCAAATCAATGGTAGTATAAGAAGCCTAATTTTTGCTGAATAGGTTGGTGAATCGTCATGATAAGAGTGAATCAATAATTCTTTCTGTGCGCAGTTTTCAGTTAACCACATGTCTTCTTGAGTTGCCCAGATACAAGTAAAATTGTAGGTTTTCATTGTGAAGTTTAGTTTTTGTACAGTACAGTAGATTGAATAAGTTTCTTTTATTTCTTTTGCATGTTCATTTTCCCTTTGTAAACATGTATATGTACCACTCCATACTTGCTGGATTAATAACTATATACGCTGAGGCTGCAGTTC]
[+] EMBL CB627717 [ GGGACGGTTGGATAATGATGCTGTCATACCTGCTGCAAAGATTGCACAATTAAATGTTCATAGTTCAATATATAGAGAAGATCCAGTTGAGATTCTACCATGCCTTGCACCTCTGAAGAAAGGAGGCCTTTGCCAGAGAAGAGATCTCAAGATATGCCCGTTTCATGGGCCTATTGTTCCACGAGATGCCGAAGGAAATCCAATTTATCAGAGTGATGGCCATTGTGATGCAGAAGGAAATCCAGTTGGGCAGACTGATGGCCGTTATGATGCAGCAGTAAGTCCTATTGATCCGAATGAAGACAGTTCTGATTTAAGAGAAAATATGATTATGCCAGATGGAAGCAGTGATGGTGAATGTATTTATGAGTCCTCTCCTTCAAGAACGGCAAACATAAATAATGACATTAGCGACAGTGATGTAGGTCATGACCTCGGTAAAATTACAGTGGAGCAGTTGGCGAGACAGGCAGTGCAGAATGTCCGGAAAAGGGACAGGGATGACAAAAAAGCTCTGGAAAAAGCCCAACGAGTGAGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCA ]
[-] EMBL CB627716 [ TAAGTCNTATTGATCCGAATGAAGACAGTTCTGATTTAAGAGAAAATATGATTATGCCAGATGGAAGCAGTGATGGTGAATGTATTTATGAGTCCTCTCCTTCAAGAACGGCAAACATAAATAATGACATTAGCGACAGTGATGTAGGTCATGACCTCGGTAAAATTACAGTGGAGCAGTTGGCGAGACAGGCAGTGCAGAATGTCCGGAAAAGGGACAGGGATGACAAAAAAGCTCTGGAAAAAGCCCAACGAGTGAGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCATTCCCAAATCAATGGTAGTATAAGAAGCCTAATTTTTGCTGAATAGGTTGGTGAATCGTCATGATAAGAGTGAATCAATAATTCTTTCTATGCGCAGTTTTCAGTTAACCACATGTCTTCTTGAGTTGCCCAGATACAAGTAAAATTGTAGGTTTTCGTTGTGAAGTTTAGTTTTTGTACAGTACAGTAGATTGAATAAGTTTCTTTTATTTCTTTTGCATGTTCATTTTCCCTTTGTAAACATGTATATGTACCACTCCATACTTGCTGGATTAATAACTATATACGCTGAGGCT ]
[+] EMBL CB682914 [ gcagccttGAATGTCCGGAAAAGAGACAGGGATGACAAAAAAGCTCTGGAAAAAGCCCAACGAGCGAGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCATTCCCAAATCAATGGTAGTATAAGAAGCCTAATTTTTGCTGAATAGGTTGGTGAATCGTCATGATAAGAGTGAATCAATAATTCTTTCTGTGCGCAGTTTTCAGTTAACCACATGTCTTCTTGAGTTGCCCAGATACAAGTAAAATTGTAGGTTTTCATTGTGAAGTTTAGTTTTTGTACAGTACAGTAGATTGAATAAGTTTCTTTTATTTCTTTTGCATGTTCATTTTCCCTTTGTAAACATGTATATGTACCACTCCATACTTGCTGGATTAATAACTATATACGCTGAGGCTGCAGTTC]
[+] EMBL CA753186 [ AGAATTCGTCAGCATAATCAAGATGTTTTGCGGGAAGCGGCTCTTGCTTCAACCTCGCGCTCAGCGGCAGACTATGACCTCCCTTCGCCAGCAGTGTCTCGACGGGGACGCCGAGGTAAGACAAAGGGACCAACACTGGCATCGATGCTGAAGAAGAAAGTTACTTCCAAAGATAGAATTGCAGAGAGGCTTCTGAATGCTCGAGCTAGGGATGCGACAATAAGAGAAGTTTCACATACTGAAGATATGAGCTACAGAGAAGCATTCCCAAATCAATGGTAGTATAAGAAGCCTAATTTTTGCTGAATAGGTTGGTGAATCGTCATGATAAGAGTGAATCAATAATTCTTTCTATGCGCAGTTTTCAGTTAACCACATGTCTTCTTGAGTTGCCCAGATACAAGTAAAATTGTAGGTTTTCGTTGTGAAGTTTAGTTTTTGTACAGTACAGTAGATTGAATAAGTTTCTTTTATTTCTTTTGCATGTTCATTTTCCCTTTGT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||