cluster # 8841

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Oryza sativa
cluster # 8841 cluster # 8841 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8841#0 length = 2000 sequences # 6
consensusID : consensus_8841#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2000
fasta sequence
                              [CACCACCACCACCACAACAACAGCAACAACCATCGGCTACGCCGCATCATCCCCCGAGTCCTCCTCGCCGTCTTCGCCATCTACGCCGTCTCGTTCGCGGCGTACCTCCTCCGCCACCAGTCGCCGCACCCGCACCCGCACCCTGCCGCTGACCCCGAGCGCGACGCCGTGGACGCAGCCGGAGGAGGCGGAGGAGGAGGAGCCGTGGACCGTGTGCGGGTAGAAGCGCCGTCCTCGCAGAAGCCATGGCCTCGCCTCCCCTCCTTCCTCCCGTGGACGTCCGCCTCCGTTCGGCCGCCGCCGAAGCACTCCTGTGAGGGGTACTTCGGGAACGGGTTCTCCCGCCTCGTGGACGTGCTCCCCGCGCGGGGCGGCGGCGGCGGCGGGTGGTTCCGGTGCCACCACAGCGAGACGCTGCGCAGCTCGATCTGCGAGGGCGGGAGGGTGCGGCTCGACCCGGGGCTCATCGCGATGTCGCGCGGCGGCGAGCCGCTCGACCAGGTGATGGGCCGCGCCGAGGAGGAGGAGCTGCCCAAGTACGAGCCCGGCGCGCTGCAGGTGGAGGCGGCGGCGAAGAGGACGGGGCCGTTGGTGGAAGCGGGGTTCCTCGACGCCTACGTGCCCACCGGCGGGATCGGGATGCACACGATGAGGTCGCTGCTCGACTCGGGGCGCGTCGTGCCGCCCGGCGAGCTACACTGCTCGCAGTGGGTTGAAGAACCAACACTTCTAGTAACTCGTTTTGAATATGCAAACCTTTTCCACACAATTACGGACTGGTACAGTGCATATGTCAGTTCCAGAGTCACGGATTTACCTAACCGCCCTAATGTGGTCTTTGTGGATGGACATTGCAAGGCACAACTGGAGCAAACATGGGAAGCACTTTTCTCAAATGTGACATATGTTAAGAATTTCTCTGGCCCTGTTTGTTTTCGACATGCAATTCTTTCACCATTGGGCTATGAGACTGCGCTATTTAAGGGCCTTAGTGAGAGCTTTAGCTGCGAAGGTGCTTCTGCGGAGTCCCTCAGAGAAAAGCCTGATCACCAGAAAACGGCAAGGTTGTCTGAATTTGGTGAGATGATTTTAGCTTCTTTTGATCTTCTGAGGGATGACATACTGTCATCCAAAACATCAAATGGGCTCAATGTTCTCTTTGTTCGGCGAGAGGACTACTTGGCCCATCCACGCCACAGTGGAAAGGTTGAATCTAGACTAAGCAATGAGAAGGAGGTATATGATGCAATTGAGGGCTGGGCAAAAGGTCAGAAATGCAAAATAAATGTCATCAATGGTCTTTTTGCCCACATGAACATGAAGGAGCAACTGCGTGCTATACAGGAAGCTTCAGTAGTAATAGGGGCACATGGGGCTGGTCTAACTCACTTGGTTTCAGCTACCCCAGATACAAAAGTCCTTGAAATCATCAGCAGCATGTATCGACGCCCACATTTTGCATTGATCTCACACTGGAAGAGCTTAGAGTATCATGCCATAAATCTCCCTGGATCATATGCAAGGGTAACAGATGTTATCAATGAGTTGAGTAATATACTGAAAGGTTTTGGATGCTGAGACAGAGCTAGGTATTCATCAGGAAAGTCACCATACTAACAACACAAATGCTTACAATTTCAATGGATGGGAAGGAGGTTATTTGCATCTGTGATCTGTGAACTGATGCATTACCAGGGCTCATCACTTCATCGGAGGAATTTTTATGCTGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCGCACACTTTTCTACCAT-GAATTCATGGTCTTGA-GGACCGATCCTCAAACTGTAATTGTAATTCATCATTTGGGACATTCGGCGACAATTCTTGTATGTTAATGCATAATGTTGAGTGCTTCAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK101954             [CACCACCACCACCACAACAACAGCAACAACCATCGGCTACGCCGCATCATCCCCCGAGTCCTCCTCGCCGTCTTCGCCATCTACGCCGTCTCGTTCGCGGCGTACCTCCTCCGCCACCAGTCGCCGCACCCGCACCCGCACCCTGCCGCTGACCCCGAGCGCGACGCCGTGGACGCAGCCGGAGGAGGCGGAGGAGGAGGAGCCGTGGACCGTGTGCGGGTAGAAGCGCCGTCCTCGCAGAAGCCATGGCCTCGCCTCCCCTCCTTCCTCCCGTGGACGTCCGCCTCCGTTCGGCCGCCGCCGAAGCACTCCTGTGAGGGGTACTTCGGGAACGGGTTCTCCCGCCTCGTGGACGTGCTCCCCGCGCGGGGCGGCGGCGGCGGCGGGTGGTTCCGGTGCCACCACAGCGAGACGCTGCGCAGCTCGATCTGCGAGGGCGGGAGGGTGCGGCTCGACCCGGGGCTCATCGCGATGTCGCGCGGCGGCGAGCCGCTCGACCAGGTGATGGGCCGCGCCGAGGAGGAGGAGCTGCCCAAGTACGAGCCCGGCGCGCTGCAGGTGGAGGCGGCGGCGAAGAGGACGGGGCCGTTGGTGGAAGCGGGGTTCCTCGACGCCTACGTGCCCACCGGCGGGATCGGGATGCACACGATGAGGTCGCTGCTCGACTCGGGGCGCGTCGTGCCGCCCGGCGAGCTACACTGCTCGCAGTGGGTTGAAGAACCAACACTTCTAGTAACTCGTTTTGAATATGCAAACCTTTTCCACACAATTACGGACTGGTACAGTGCATATGTCAGTTCCAGAGTCACGGATTTACCTAACCGCCCTAATGTGGTCTTTGTGGATGGACATTGCAAGGCACAACTGGAGCAAACATGGGAAGCACTTTTCTCAAATGTGACATATGTTAAGAATTTCTCTGGCCCTGTTTGTTTTCGACATGCAATTCTTTCACCATTGGGCTATGAGACTGCGCTATTTAAGGGCCTTAGTGAGAGCTTTAGCTGCGAAGGTGCTTCTGCGGAGTCCCTCAGAGAAAAGCCTGATCACCAGAAAACGGCAAGGTTGTCTGAATTTGGTGAGATGATTTTAGCTTCTTTTGATCTTCTGAGGGATGACATACTGTCATCCAAAACATCAAATGGGCTCAATGTTCTCTTTGTTCGGCGAGAGGACTACTTGGCCCATCCACGCCACAGTGGAAAGGTTGAATCTAGACTAAGCAATGAGAAGGAGGTATATGATGCAATTGAGGGCTGGGTAAAAGGTCAGAAATGCAAAATAAATGTCATCAATGGTCTTTTTGCCCACATGAACATGAAGGAGCAACTGCGTGCTATACAGGAAGCTTCAGTAGTAATAGGGGCACATGGGGCTGGTCTAACTCACTTGGTTTCAGCTACCCCAGATACAAAAGTCCTTGAAATCATCAGCAGCATGTATCGACGCCCACATTTTGCATTGATCTCACACTGGAAGAGCTTAGAGTATCATGCCATAAATCTCCCTGGATCATATGCAAGGGTAACAGATGTTATCAATGAGTTGAGTAATATACTGAAAGGTTTTGGATGCTGAGACAGAGCTAGGTATTCATCAGGAAAGTCACCATACTAACAACACAAATGCTTACAATTTCAATGGATGGGAAGGAGGTTATTTGCATCTGTGATCTGTGAACTGATGCATTACCAGGGCTCATCACTTCATCGGAGGAATTTTTATGCTGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCGCACACTTTTCTACCAT GAATTCATGGTCTTGA GGACCGATCCTCAAACTGTAATTGTAATTCATCATTTGGGACATTCGGCGACAATTCTTGTATGTTAATGCATAATGTTGAGTGCTTCtcc                      ]
[+] EMBL CB000330             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAACATCAAATGGGCTCAATGTTCTCTTTGTCCCGCGAGAGGACTACTTGGCCCATCCACGCCACAGTGGAAAGGTTGAATCTAGACTAAGCAATGAGAAGGAGGCATATGATGCAATTGAGGGCTGGGCAAAAGGTCAGAAATGCAAAATAAATGTCATCAATGGTCTTTTTGCCCACATGAACATGAAGGAGCAACTGCGTGCTATACAGGAAGCTTCAGTAGTAATAGGGGCACATGGGGCTGGTCTAACTCACTTGGTTTCAGCTACCCCAGATACAAAAGTCCTTGAAATCATCAGCAGCATGTATCGACGCCCACATTTTGCATTGATCTCACACTGGAAGAGCTTAGAGTATCATGCCATAAATCTCCCTGGATCATATGCAAGGGTAACAGATGTTATCAATGAGTTGAGTAATATACTGAAAGGTTTTGGATGCTGAGACAGAGCTAGGTATTCATCAGGAAAGTCACCATACTAACAACACAAATGCTTACAATTTCAATGGATGGGAAGGAGGTTATTTGCATCTGTGATCTGTGAACTGATGCATTACCAGGGCTCATCACTTCATCGGAGGAATTTTTATGCTGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCGCACACTTTTCTACCAT GAATTCATGGTCTTGA GGACCGATCCTCAAACTG                                                                                               ]
[+] EMBL CB000901             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACATCAAATGGGCTCAATGTTCTCTTTGTTCGGCGAGAGGACTACTTGGCCCATCCACGCCACAGTGGAAAGGTTGAATCTAGACTAAGCAATGAGAAGGAGGTATATGATGCAATTGAGGGCTGGGCAAAAGGTCAGAAATGCAAAATAAATGTCATCAATGGTCTTTTTGCCCACATGAACATGAAGGAGCAACTGCGTGCTATACAGGAAGCTTCAGTAGTAATAGGGGCACATGGGGCTGGTCTAACTCACTTGGTTTCAGCTACCCCAGATACAAAAGTCCTTGAAATCATCAGCAGCATGTATCGACGCCCACATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSS15079A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGAGCTTAGAGTATCATGCCATAAATCTCCCTGGATCATATGCAAGGGTAACAGATGTTATCAATGAGTTGAGTAATATACTGAAAGGTTTTGGATGCTGAGACAGAGCTAGGTATTCATCAGGAAAGTCACCATACTAACAACACAAATGCTTACAATTTCAATGGATGGGAAGGAGGTTATTTGCATCTGTGATCTGTGAACTGATGCATTACCAGGGCTCATCACTTCATCGGAGGAATTTTTATGCTGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCG ACACTTTTCTACCATGGAATTCATGGTCTTGAGGGNCCG TCCTCAAACTGTAATTGTAATTC                                                                                   ]
[+] EMBL CA757905             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCGCACACTTTTCTACCAT GAATTCATGGTCTTGA GGACCGATCCTCAAACTGTAATTGTAATTCATCATTTGGGACATTCGGCGACAATTCTTGTATGTTAATGCATAATGTTGAGTGCTTCAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA757446             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGCCAAATGCAGAGAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCAATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCGCACACTTTTCTACCAT GAATTCATGGTCTTGA GGACCGATCCTCAAACTGTAATTGTAATTCATCATTTGGGACATTCGGCGACAATTCTTGTATGTTAATGCATAATGTTGAGTGCTTCANAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_8841#0
CACCACCACCACCACAACAACAGCAACAACCATCGGCTACGCCGCATCATCCCCCGAGTC
CTCCTCGCCGTCTTCGCCATCTACGCCGTCTCGTTCGCGGCGTACCTCCTCCGCCACCAG
TCGCCGCACCCGCACCCGCACCCTGCCGCTGACCCCGAGCGCGACGCCGTGGACGCAGCC
GGAGGAGGCGGAGGAGGAGGAGCCGTGGACCGTGTGCGGGTAGAAGCGCCGTCCTCGCAG
AAGCCATGGCCTCGCCTCCCCTCCTTCCTCCCGTGGACGTCCGCCTCCGTTCGGCCGCCG
CCGAAGCACTCCTGTGAGGGGTACTTCGGGAACGGGTTCTCCCGCCTCGTGGACGTGCTC
CCCGCGCGGGGCGGCGGCGGCGGCGGGTGGTTCCGGTGCCACCACAGCGAGACGCTGCGC
AGCTCGATCTGCGAGGGCGGGAGGGTGCGGCTCGACCCGGGGCTCATCGCGATGTCGCGC
GGCGGCGAGCCGCTCGACCAGGTGATGGGCCGCGCCGAGGAGGAGGAGCTGCCCAAGTAC
GAGCCCGGCGCGCTGCAGGTGGAGGCGGCGGCGAAGAGGACGGGGCCGTTGGTGGAAGCG
GGGTTCCTCGACGCCTACGTGCCCACCGGCGGGATCGGGATGCACACGATGAGGTCGCTG
CTCGACTCGGGGCGCGTCGTGCCGCCCGGCGAGCTACACTGCTCGCAGTGGGTTGAAGAA
CCAACACTTCTAGTAACTCGTTTTGAATATGCAAACCTTTTCCACACAATTACGGACTGG
TACAGTGCATATGTCAGTTCCAGAGTCACGGATTTACCTAACCGCCCTAATGTGGTCTTT
GTGGATGGACATTGCAAGGCACAACTGGAGCAAACATGGGAAGCACTTTTCTCAAATGTG
ACATATGTTAAGAATTTCTCTGGCCCTGTTTGTTTTCGACATGCAATTCTTTCACCATTG
GGCTATGAGACTGCGCTATTTAAGGGCCTTAGTGAGAGCTTTAGCTGCGAAGGTGCTTCT
GCGGAGTCCCTCAGAGAAAAGCCTGATCACCAGAAAACGGCAAGGTTGTCTGAATTTGGT
GAGATGATTTTAGCTTCTTTTGATCTTCTGAGGGATGACATACTGTCATCCAAAACATCA
AATGGGCTCAATGTTCTCTTTGTTCGGCGAGAGGACTACTTGGCCCATCCACGCCACAGT
GGAAAGGTTGAATCTAGACTAAGCAATGAGAAGGAGGTATATGATGCAATTGAGGGCTGG
GCAAAAGGTCAGAAATGCAAAATAAATGTCATCAATGGTCTTTTTGCCCACATGAACATG
AAGGAGCAACTGCGTGCTATACAGGAAGCTTCAGTAGTAATAGGGGCACATGGGGCTGGT
CTAACTCACTTGGTTTCAGCTACCCCAGATACAAAAGTCCTTGAAATCATCAGCAGCATG
TATCGACGCCCACATTTTGCATTGATCTCACACTGGAAGAGCTTAGAGTATCATGCCATA
AATCTCCCTGGATCATATGCAAGGGTAACAGATGTTATCAATGAGTTGAGTAATATACTG
AAAGGTTTTGGATGCTGAGACAGAGCTAGGTATTCATCAGGAAAGTCACCATACTAACAA
CACAAATGCTTACAATTTCAATGGATGGGAAGGAGGTTATTTGCATCTGTGATCTGTGAA
CTGATGCATTACCAGGGCTCATCACTTCATCGGAGGAATTTTTATGCTGCCAAATGCAGA
GAGAGATTGTGCTGACAAGTGACAATCTTTAATCTGCATATCGTGTGGAACAAGAAGGCA
ATCCTTCCCCCCTTCCTGACATCAGCCGACGACATGAAAACCAATCCATGCTGCGCACAC
TTTTCTACCATGAATTCATGGTCTTGAGGACCGATCCTCAAACTGTAATTGTAATTCATC
ATTTGGGACATTCGGCGACAATTCTTGTATGTTAATGCATAATGTTGAGTGCTTCAAAAA
AAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case