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Oryza sativa
cluster # 8847 cluster # 8847       Sequences # 6       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8847#0 length = 1931 sequences # 4  
 consensus_8847#1 length = 758 sequences # 1  
consensus_8847#2 length = 685 sequences # 1  
consensusID : consensus_8847#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1931
fasta sequence 
                              [AGGCGTAGGCGAGCGAGCAAACGACACGGCACGACAGTACGGCACCAAACCCCAACCCCAACACCGGTCGCGCTCGCGTCGCACCGCCCCGGCAGCCAAGAGAGAGAAGCCCAGGAAAGGCCAAGGTGATCGACGAGCGCACGCACGCACGCACGCGGCGCCGTCAGAAGGCCAGAGCGGGGGGAGAGGGGAGGAGGGGCTAAATCGGGGAGAGGTCTCCGTCATCTCCGACTCGCGGCGCGGCCCCCTCGCCGAGACCGACGGGCCGACGCAACCGAGGCGAGCCAGCGATCGAGCGGGCGGGGGGCAACGCGTACAAAAAAAACCCCCTCCCCTTCCCTTCCCTTCCCTCTCGGTCGCGTCGTCGCGTGGTCGGCGAATATTCGAGCGGCAACGGCATAACACCATTGTCGCCCGGGACGCGCGCTCTTTCTCTCTCTCTCTCTCTTCCTGGCGATGGCGGCGGCGGCGGGGGAGGAGGTGGAGGCGGCGCGGTGGGCGGAGGCGGAGGACGAGAGGAAGGAGGGGCTGCGGCGGCGGCGGAGGTACGGGCTTGTGGAGTACCGGGCGCTGCCGGGCTACATGCGGGACAACGAGTACATCCTGCGCCACTACCGCTGCGAGTGGCCGCTCCCGCAGGTGCTCCTCTCCGCCTTCTCCATCCACAACGAGACCCTCAACGTCTGGACGCACTTGATAGGATTTTTCATCTTTCTTGTTCTTACCATATACACCGCAACACAAGTTCCAAATGTAGTAGATCTTCAAAGTCTGCAGCATTTACCTGATGTGCTGAGAAACGCTGATCTTCATAAGATTCAGACAGAACTTGTGGCATGCCTTCCTTCGTTACCTCACCTTTCTGACTTGCAAAAGCTGAAGGATGAATTGAAAAGCTCATGGAATTCAATTGAGGTGCTTCCATCATTGTCCCGTTGGCACCTCTTGGAGTTACTATCAAGTTGCTTGCCGCACAGATTTACTCATTCCAATGAAACCAGTCTGTCTGTTCTTCAAAGCATGAAGGAAGATATAGCAAACATGATTGCGCCACAGTTGATTAGGCCAATTCCGAGATGGCCATTTTATGCCTTCTTGGGAGGAGCAATGTTTTGCCTTCTTGCCAGCAGCACATGCCATCTTCTCTCCTGCCACTCCCGTCGCCTTGCATACATTATGCTTCGCCTTGATTATGCAGGCATTGCTGCTCTTATCGCAACATCATTCTACCCTCCAGTATACTATTCTTTCATGTGCTATCCATTCTTTTGCAACCTGTATCTCAGCTGCATAACTATTTTAGGAGTGGCAACTATTGCTTTCTCTTTACTCCCTGTTTTCCAGAACCCTGAGTTTCGGACCATACGAGCATGCCTCTTCTTTGGCATGGGTGCATCCGGCGTGATCCCTGTCATTCACAAATTGATCCTCTTTTGGCACCAACCAGAGGCATTGCACACTACCGCATATGAGGTTCTGATGGGCCTTTTCTATGGCATTGGGGCACTGGTGTATGCAACTCGGGTGCCCGAGCGCTGGATGCCTGGAAAATTTGACATTGCTGGTCATAGCCACCAGCTTTTTCATGTGTTAGTTGTTGCTGGAGCATACACACACTATCATTCTGGACTGGTATACCTCAAGTGGAGAGACGTGCAAGGCTGCTAGAAATTATCTGTGTGCTCGTAGGATGTGGATAGATTGTAGGTGCCCTGCTTGTGTCCCGAAAAAGAGGACCGCTGATTCTCTCTCGTCTTCAGAAACAAAAGATGACTGTTGTTGTTGGCCAAAAGACTAGACCTGGTCTGTTGTAAAATGTAACGGAGGACTTGCTAGTACTGTGAGATACAAATTGATAATGAGTGATGATCGGTACCTGTAAACTGTGGTGTGGTATTGGCTGATTTTTCAGGGTGCAACTCACTTGATAA]

[+] EMBL AK072709             [AGGCGTAGGCGAGCGAGCAAACGACACGGCACGACAGTACGGCACCAAACCCCAACCCCAACACCGGTCGCGCTCGCGTCGCACCGCCCCGGCAGCCAAGAGAGAGAAGCCCAGGAAAGGCCAAGGTGATCGACGAGCGCACGCACGCACGCACGCGGCGCCGTCAGAAGGCCAGAGCGGGGGGAGAGGGGAGGAGGGGCTAAATCGGGGAGAGGTCTCCGTCATCTCCGACTCGCGGCGCGGCCCCCTCGCCGAGACCGACGGGCCGACGCAACCGAGGCGAGCCAGCGATCGAGCGGGCGGGGGGCAACGCGTACAAAAAAAACCCCCTCCCCTTCCCTTCCCTTCCCTCTCGGTCGCGTCGTCGCGTGGTCGGCGAATATTCGAGCGGCAACGGCATAACACCATTGTCGCCCGGGACGCGCGCTCTTTCTCTCTCTCTCTCTCTTCCTGGCGATGGCGGCGGCGGCGGGGGAGGAGGTGGAGGCGGCGCGGTGGGCGGAGGCGGAGGACGAGAGGAAGGAGGGGCTGCGGCGGCGGCGGAGGTACGGGCTTGTGGAGTACCGGGCGCTGCCGGGCTACATGCGGGACAACGAGTACATCCTGCGCCACTACCGCTGCGAGTGGCCGCTCCCGCAGGTGCTCCTCTCCGCCTTCTCCATCCACAACGAGACCCTCAACGTCTGGACGCACTTGATAGGATTTTTCATCTTTCTTGTTCTTACCATATACACCGCAACACAAGTTCCAAATGTAGTAGATCTTCAAAGTCTGCAGCATTTACCTGATGTGCTGAGAAACGCTGATCTTCATAAGATTCAGACAGAACTTGTGGCATGCCTTCCTTCGTTACCTCACCTTTCTGACTTGCAAAAGCTGAAGGATGAATTGAAAAGCTCATGGAATTCAATTGAGGTGCTTCCATCATTGTCCCGTTGGCACCTCTTGGAGTTACTATCAAGTTGCTTGCCGCACAGATTTACTCATTCCAATGAAACCAGTCTGTCTGTTCTTCAAAGCATGAAGGAAGATATAGCAAACATGATTGCGCCACAGTTGATTAGGCCAATTCCGAGATGGCCATTTTATGCCTTCTTGGGAGGAGCAATGTTTTGCCTTCTTGCCAGCAGCACATGCCATCTTCTCTCCTGCCACTCCCGTCGCCTTGCATACATTATGCTTCGCCTTGATTATGCAGGCATTGCTGCTCTTATCGCAACATCATTCTACCCTCCAGTATACTATTCTTTCATGTGCTATCCATTCTTTTGCAACCTGTATCTCAGCTGCATAACTATTTTAGGAGTGGCAACTATTGCTTTCTCTTTACTCCCTGTTTTCCAGAACCCTGAGTTTCGGACCATACGAGCATGCCTCTTCTTTGGCATGGGTGCATCCGGCGTGATCCCTGTCATTCACAAATTGATCCTCTTTTGGCACCAACCAGAGGCATTGCACACTACCGCATATGAGGTTCTGATGGGCCTTTTCTATGGCATTGGGGCACTGGTGTATGCAACTCGGGTGCCCGAGCGCTGGATGCCTGGAAAATTTGACATTGCTGGTCATAGCCACCAGCTTTTTCATGTGTTAGTTGTTGCTGGAGCATACACACACTATCATTCTGGACTGGTATACCTCAAGTGGAGAGACGTGCAAGGCTGCTAGAAATTATCTGTGTGCTCGTAGGATGTGGATAGATTGTAGGTGCCCTGCTTGTGTCCCGAAAAAGAGGACCGCTGATTCTCTCTCGTCTTCAGAAACAAAAGATGACTGTTGTTGTTGGCCAAAAGACTAGACCTGGTCTGTTGTAAAATGTAACGGAGGACTTGCTAGTACTGTGAGATACAAATTGATAATGAGTGATGATCGGTACCTGTAAACTGTGGTGTGGTATTGGCTGATTTTTCAGGGTGCAACTCACTTGATAA]
[+] EMBL CF306716             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GTCTGTTCTTCAAAGCATGAAGGAAGATATAGCAAACATGATTGCGCCACAGTTGATTAGGCCAATTCCGAGATGGCCATTTTATGCCTTCTTGGGAGGAGCAATGTTTTGCCTTCTTGCCAGCAGCACATGCCATCTTCTCTCCTGCCACTCCCGTCGCCTTGCATACATTATGCTTCGCCTTGATTATGCAGGCATTGCTGCTCTTATCGCAACATCATTCTACCCTCCAGTATACTATTCTTTCATGTGCTATCCATTCTTTTGCAACCTGTATCTCAGCTGCATAACTATTTTAGGAGTGGCAACTATTGCTTTCTCTTTACTCCCTGTTTTCCAGAACCCTGAGTTTCGGACCATACGAGCATGCCTCTTCTTTGGCATGGGTGCATCCGGCGTGATCCCTGTCATTCACAAATTGATCCTCTTTTGGCACCAACCAGAGGCATTGCACACTACCGCATATGAGGTTCTGATGGGCCTTTTCTATGGCATTGGGGCAC                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA767274             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACATTATGCTTCGCCTTGATTATGCAGGCNTTGCTGCTCTTATCGCAACATCATTCTACCCTCCAGTATACTATTCTTTCATGTGCTATCCATTCTTTNGCAACCTGTATCTCAGCTGCATAACTATTTTAGGAGTGGCAACTATTGCTTTCTCTTTACTCCCTGGTTTCCAGAACCCTGAGTTNCGGACCATACGAGCATGCCTCTTCTTTGGCATGGGTGCATCCGGCGTGATCCCTGTCATTCACAAATTGATCCTCTTTTGGCACCAACCAGAGGCATTGCACACTACCGCATATGAGGTTCTGATGGGCCTTTTCTATGGCATTGGGGCACTGGTGTATGCAACTCGGNNGCCCGAGCGCTGGATGCCTGGAAAATTTGACATTGCTGGTCATAGCCACCAGCTTTTTCATGNGTTAGNTGTTGCTGGAGCATACACACACTATCATTCTGGACTGGTATACCTCAAGTGGAGAGACGTGCAAGGCTGCTAGAAATTATCTGNGTGCTCGTAGGATGTGGATAGATTGTAGGTGCCCTGCTTGTGTCCCGAAANAGAGGACCGCTGATTCTCTCTCGTCTTCAGAAACAANAGATGACTGTTGATGTTGGCCAAAAGACTAGACCTGGTCTGGTGTAAAAAGTAACGGAGGACTTGCTAGTACTGGGAGANACAAATTGATAATGAGTGATGATCG                                                           ]
[+] EMBL CB000936             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCAGGCATTGCTGCTCTTATCGCAACATCATTCTACCCTCCAGTATACTATTCTTTCATGTGCTATCCATTCTTTTGCAACCTGTATCTCAGCTGCATAACTATTTTAGGAGTGGCAACTATTGCTTTCTCTTTACTCCCTGTTTTCCAGAACCCTGAGTTTCGGACCATACGAGCATGCCTCTTCTTTGGCATGGGTGCATCCGGCGTGATCCCTGTCATTCACAAATTGATCCTCTTTTGGCACCAACCAGAGGCATTGCACACTACCGCATATGAGGTTCTGATGGGCCTTTTCTATGGCATTGGGGCACTGGTGTATGCAACTCGGGTGCCCGAGCGCTGGATGCCTGGAAAATTTGACATTGCTGGTCATAGCCACCAGCTTTTTCATGTGTTAGTTGTTGCTGGAGCATACACACACTATCATTCTGGACTGGTATACCTCAAGTGGAGAGACGTGCAAGGCTGCTAGAAATT                                                                                                                                                                                                                                                                  ]




>consensus_8847#0
AGGCGTAGGCGAGCGAGCAAACGACACGGCACGACAGTACGGCACCAAACCCCAACCCCA
ACACCGGTCGCGCTCGCGTCGCACCGCCCCGGCAGCCAAGAGAGAGAAGCCCAGGAAAGG
CCAAGGTGATCGACGAGCGCACGCACGCACGCACGCGGCGCCGTCAGAAGGCCAGAGCGG
GGGGAGAGGGGAGGAGGGGCTAAATCGGGGAGAGGTCTCCGTCATCTCCGACTCGCGGCG
CGGCCCCCTCGCCGAGACCGACGGGCCGACGCAACCGAGGCGAGCCAGCGATCGAGCGGG
CGGGGGGCAACGCGTACAAAAAAAACCCCCTCCCCTTCCCTTCCCTTCCCTCTCGGTCGC
GTCGTCGCGTGGTCGGCGAATATTCGAGCGGCAACGGCATAACACCATTGTCGCCCGGGA
CGCGCGCTCTTTCTCTCTCTCTCTCTCTTCCTGGCGATGGCGGCGGCGGCGGGGGAGGAG
GTGGAGGCGGCGCGGTGGGCGGAGGCGGAGGACGAGAGGAAGGAGGGGCTGCGGCGGCGG
CGGAGGTACGGGCTTGTGGAGTACCGGGCGCTGCCGGGCTACATGCGGGACAACGAGTAC
ATCCTGCGCCACTACCGCTGCGAGTGGCCGCTCCCGCAGGTGCTCCTCTCCGCCTTCTCC
ATCCACAACGAGACCCTCAACGTCTGGACGCACTTGATAGGATTTTTCATCTTTCTTGTT
CTTACCATATACACCGCAACACAAGTTCCAAATGTAGTAGATCTTCAAAGTCTGCAGCAT
TTACCTGATGTGCTGAGAAACGCTGATCTTCATAAGATTCAGACAGAACTTGTGGCATGC
CTTCCTTCGTTACCTCACCTTTCTGACTTGCAAAAGCTGAAGGATGAATTGAAAAGCTCA
TGGAATTCAATTGAGGTGCTTCCATCATTGTCCCGTTGGCACCTCTTGGAGTTACTATCA
AGTTGCTTGCCGCACAGATTTACTCATTCCAATGAAACCAGTCTGTCTGTTCTTCAAAGC
ATGAAGGAAGATATAGCAAACATGATTGCGCCACAGTTGATTAGGCCAATTCCGAGATGG
CCATTTTATGCCTTCTTGGGAGGAGCAATGTTTTGCCTTCTTGCCAGCAGCACATGCCAT
CTTCTCTCCTGCCACTCCCGTCGCCTTGCATACATTATGCTTCGCCTTGATTATGCAGGC
ATTGCTGCTCTTATCGCAACATCATTCTACCCTCCAGTATACTATTCTTTCATGTGCTAT
CCATTCTTTTGCAACCTGTATCTCAGCTGCATAACTATTTTAGGAGTGGCAACTATTGCT
TTCTCTTTACTCCCTGTTTTCCAGAACCCTGAGTTTCGGACCATACGAGCATGCCTCTTC
TTTGGCATGGGTGCATCCGGCGTGATCCCTGTCATTCACAAATTGATCCTCTTTTGGCAC
CAACCAGAGGCATTGCACACTACCGCATATGAGGTTCTGATGGGCCTTTTCTATGGCATT
GGGGCACTGGTGTATGCAACTCGGGTGCCCGAGCGCTGGATGCCTGGAAAATTTGACATT
GCTGGTCATAGCCACCAGCTTTTTCATGTGTTAGTTGTTGCTGGAGCATACACACACTAT
CATTCTGGACTGGTATACCTCAAGTGGAGAGACGTGCAAGGCTGCTAGAAATTATCTGTG
TGCTCGTAGGATGTGGATAGATTGTAGGTGCCCTGCTTGTGTCCCGAAAAAGAGGACCGC
TGATTCTCTCTCGTCTTCAGAAACAAAAGATGACTGTTGTTGTTGGCCAAAAGACTAGAC
CTGGTCTGTTGTAAAATGTAACGGAGGACTTGCTAGTACTGTGAGATACAAATTGATAAT
GAGTGATGATCGGTACCTGTAAACTGTGGTGTGGTATTGGCTGATTTTTCAGGGTGCAAC
TCACTTGATAA

consensusID : consensus_8847#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 758
fasta sequence 
                              [AGGGGGTGGCGGCAGCGTGCGATCTGAATTGGGGGAGGAGGAGAGGAGTTAGGGTTAGAGTGGTCTACACAAATCTTGAAGCATATCCAATGGTCCAAAATTCGAATAATAGGAGGTGGCACTTTTTTGTCACATGATATATANGACAGCCCCTTCTTTTATTGTATTCGTTGCATATATATATCGAGCTCGAATGGAGATCAAGCAATTTGACTGGCATCATACAACGTTTATTTGGTTACTGTTATTTAAAAGTTATGTGCTCATATGGAGATGTATGCATTCTGGAAAATTATGACTGTGGCAAGTGCAACTCCTAGGCGACATTTTTTTATGTAAAAAAGTTATCAATGTGATTAATGCAGGAATACGTCTGCTAAGTTACTTTTCCTGATATACTAAAGCTGTTTTTTAATTTGTGAACTCAGGCACTTGATAGGATTTTTCGTCTTTCTTGTTCTTACCATATACACCGCAACACAAGTTCCAAATGTAGTAGATCTTCAAGGTCTGCAGCATTTACCTGATGTGCTGAGAAACGCTGATCTTCATAAGATTCAGACAGAACTTGTGGCATGCCTTCCTTCGTTACCTCACCTTTCTGACTTGCAAAAGCTGAAGGATGAATTGAAAAGCTCATGGAATTCAATTGAGGTGCTTCCATCATTGGTCCCGTTGGCACCTCTTGGAGNTACTATCAAGNTGCTTGCCGCACAGATTTACTCATTCCAATGAAANCAGTCCTGTCTGNTCTTCAA]

[+] EMBL CA765130             [AGGGGGTGGCGGCAGCGTGCGATCTGAATTGGGGGAGGAGGAGAGGAGTTAGGGTTAGAGTGGTCTACACAAATCTTGAAGCATATCCAATGGTCCAAAATTCGAATAATAGGAGGTGGCACTTTTTTGTCACATGATATATANGACAGCCCCTTCTTTTATTGTATTCGTTGCATATATATATCGAGCTCGAATGGAGATCAAGCAATTTGACTGGCATCATACAACGTTTATTTGGTTACTGTTATTTAAAAGTTATGTGCTCATATGGAGATGTATGCATTCTGGAAAATTATGACTGTGGCAAGTGCAACTCCTAGGCGACATTTTTTTATGTAAAAAAGTTATCAATGTGATTAATGCAGGAATACGTCTGCTAAGTTACTTTTCCTGATATACTAAAGCTGTTTTTTAATTTGTGAACTCAGGCACTTGATAGGATTTTTCGTCTTTCTTGTTCTTACCATATACACCGCAACACAAGTTCCAAATGTAGTAGATCTTCAAGGTCTGCAGCATTTACCTGATGTGCTGAGAAACGCTGATCTTCATAAGATTCAGACAGAACTTGTGGCATGCCTTCCTTCGTTACCTCACCTTTCTGACTTGCAAAAGCTGAAGGATGAATTGAAAAGCTCATGGAATTCAATTGAGGTGCTTCCATCATTGGTCCCGTTGGCACCTCTTGGAGNTACTATCAAGNTGCTTGCCGCACAGATTTACTCATTCCAATGAAANCAGTCCTGTCTGNTCTTCAA]




>consensus_8847#1
AGGGGGTGGCGGCAGCGTGCGATCTGAATTGGGGGAGGAGGAGAGGAGTTAGGGTTAGAG
TGGTCTACACAAATCTTGAAGCATATCCAATGGTCCAAAATTCGAATAATAGGAGGTGGC
ACTTTTTTGTCACATGATATATANGACAGCCCCTTCTTTTATTGTATTCGTTGCATATAT
ATATCGAGCTCGAATGGAGATCAAGCAATTTGACTGGCATCATACAACGTTTATTTGGTT
ACTGTTATTTAAAAGTTATGTGCTCATATGGAGATGTATGCATTCTGGAAAATTATGACT
GTGGCAAGTGCAACTCCTAGGCGACATTTTTTTATGTAAAAAAGTTATCAATGTGATTAA
TGCAGGAATACGTCTGCTAAGTTACTTTTCCTGATATACTAAAGCTGTTTTTTAATTTGT
GAACTCAGGCACTTGATAGGATTTTTCGTCTTTCTTGTTCTTACCATATACACCGCAACA
CAAGTTCCAAATGTAGTAGATCTTCAAGGTCTGCAGCATTTACCTGATGTGCTGAGAAAC
GCTGATCTTCATAAGATTCAGACAGAACTTGTGGCATGCCTTCCTTCGTTACCTCACCTT
TCTGACTTGCAAAAGCTGAAGGATGAATTGAAAAGCTCATGGAATTCAATTGAGGTGCTT
CCATCATTGGTCCCGTTGGCACCTCTTGGAGNTACTATCAAGNTGCTTGCCGCACAGATT
TACTCATTCCAATGAAANCAGTCCTGTCTGNTCTTCAA

consensusID : consensus_8847#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 685
fasta sequence 
                              [CGGCGGAGGTACGGGCTTGTGGAGTACCCGGCGCTCCCGGGCTACATGCGGGACAACGAGTACATCCTGCGCCACTACCGCTGCGAGTGGCCGCTCCCGCAGGTGCTCCTCTCCGCCTTCTCCATCCACAACGAGACCCTCAANGTCTGGACGTACGTTCCCTCGTTCCTTTNTCCGTCTCTCCTCCCCCCCTCTCGATTGATTGTGCGGTTGAATTTCCTGTCATGTGAGAAGGAGGTTAAGTTGTTCATTGCACGGGTAATGCGGTGGAAAGGAGATGTGACATCGATTTCTTTCATGGATGGATCTGTTATACGGAGCAAAGAAATTGGTCTATAGATCGGGCGTTCGAAACATCTCTTGTCTGCTTGTGGATGCTATAGCTTTATGTTTCAGGCTGGATAAATCCCATACAACATATTTCTTCTGGCATTGGGTATTTGAAGTCTGAATCTTGAAATATTAGGCTGCCCTCAAAATATCTAGCCATTCTGTAGATTTTTGCTCTTGTGCTTATTTACTAATTTATTTATTTATTTTATTTGAATATTCTCAATAGTGCATAGTTTTGTAGTTGTGTAAATTAGGGAGGCCAAGGCTTACAGTTTCTAAACAGTCTGGTATTCAATTTACCTACCTTTCTCTCTACTTTAAAGACTAAACTCAATTTGCTCAAAAAAAAAAA]

[-] EMBL CA759301             [CGGCGGAGGTACGGGCTTGTGGAGTACCCGGCGCTCCCGGGCTACATGCGGGACAACGAGTACATCCTGCGCCACTACCGCTGCGAGTGGCCGCTCCCGCAGGTGCTCCTCTCCGCCTTCTCCATCCACAACGAGACCCTCAANGTCTGGACGTACGTTCCCTCGTTCCTTTNTCCGTCTCTCCTCCCCCCCTCTCGATTGATTGTGCGGTTGAATTTCCTGTCATGTGAGAAGGAGGTTAAGTTGTTCATTGCACGGGTAATGCGGTGGAAAGGAGATGTGACATCGATTTCTTTCATGGATGGATCTGTTATACGGAGCAAAGAAATTGGTCTATAGATCGGGCGTTCGAAACATCTCTTGTCTGCTTGTGGATGCTATAGCTTTATGTTTCAGGCTGGATAAATCCCATACAACATATTTCTTCTGGCATTGGGTATTTGAAGTCTGAATCTTGAAATATTAGGCTGCCCTCAAAATATCTAGCCATTCTGTAGATTTTTGCTCTTGTGCTTATTTACTAATTTATTTATTTATTTTATTTGAATATTCTCAATAGTGCATAGTTTTGTAGTTGTGTAAATTAGGGAGGCCAAGGCTTACAGTTTCTAAACAGTCTGGTATTCAATTTACCTACCTTTCTCTCTACTTTAAAGACTAAACTCAATTTGCTCAAAAAAAAAAA]




>consensus_8847#2
CGGCGGAGGTACGGGCTTGTGGAGTACCCGGCGCTCCCGGGCTACATGCGGGACAACGAG
TACATCCTGCGCCACTACCGCTGCGAGTGGCCGCTCCCGCAGGTGCTCCTCTCCGCCTTC
TCCATCCACAACGAGACCCTCAANGTCTGGACGTACGTTCCCTCGTTCCTTTNTCCGTCT
CTCCTCCCCCCCTCTCGATTGATTGTGCGGTTGAATTTCCTGTCATGTGAGAAGGAGGTT
AAGTTGTTCATTGCACGGGTAATGCGGTGGAAAGGAGATGTGACATCGATTTCTTTCATG
GATGGATCTGTTATACGGAGCAAAGAAATTGGTCTATAGATCGGGCGTTCGAAACATCTC
TTGTCTGCTTGTGGATGCTATAGCTTTATGTTTCAGGCTGGATAAATCCCATACAACATA
TTTCTTCTGGCATTGGGTATTTGAAGTCTGAATCTTGAAATATTAGGCTGCCCTCAAAAT
ATCTAGCCATTCTGTAGATTTTTGCTCTTGTGCTTATTTACTAATTTATTTATTTATTTT
ATTTGAATATTCTCAATAGTGCATAGTTTTGTAGTTGTGTAAATTAGGGAGGCCAAGGCT
TACAGTTTCTAAACAGTCTGGTATTCAATTTACCTACCTTTCTCTCTACTTTAAAGACTA
AACTCAATTTGCTCAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8847#0      AGGCGTAGGCGAGCGAGCAAACGACACGGCACGACAGTACGGCACCAAACCCCAACCCCA 60
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      ACACCGGTCGCGCTCGCGTCGCACCGCCCCGGCAGCCAAGAGAGAGAAGCCCAGGAAAGG 120
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      CCAAGGTGATCGACGAGCGCACGCACGCACGCACGCGGCGCCGTCAGAAGGCCAGAGCGG 180
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      GGGGAGAGGGGAGGAGGGGCTAAATCGGGGAGAGGTCTCCGTCATCTCCGACTCGCGGCG 240
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      CGGCCCCCTCGCCGAGACCGACGGGCCGACGCAACCGAGGCGAGCCAGCGATCGAGCGGG 300
consensus_8847#1      ------------AGGGGGTGGCGGCAGCGTGCGATCTGAATTGGGGGAGGAGGAGAGGAG 48
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      CGGGGGGCAACGCGTACAAAAAAAACCCCCTCCCCTTCCCTTCCCTTCCCTCTCGGTCGC 360
consensus_8847#1      TTAGGGTTAGAGTGGTCTACACAAATCTTGAAGCATATCCAATGGTCCAAAAT---TCGA 105
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      GTCGTCGCGTGGTCGGCGAATATTCGAGCGGCAACG-GCATAACACCATTGTCGCCCGGG 419
consensus_8847#1      ATAATAG-GAGGT-GGCACTTTTTTGTCACATGATATATANGACAGCCCCTTCTTTTATT 163
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      ACGCGCGCTCTTTCTCTCTCTCTCTCTCTTCCTGGCGATGGCGGCGGCGGCGGGGGAGGA 479
consensus_8847#1      GTATTCGTTGCATATATATATCGAGCTCGAA-TGGAGATCAAGCAATTTGACTGGCATCA 222
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      GGTGGAGGCGGCGCGGTGGGCGGAGGCGGAGGACGAGAGGA--AGGAGGGGCTGCGGCGG 537
consensus_8847#1      TACAACGTTTATTTGGTTACTGTTATTTAAAAGTTATGTGCTCATATGGAGATGTATGCA 282
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      CGGCGGAGGTACGGGCTTGTGGAGTACCGGGCGCTGCCGGGCTACATGCGGGACAACGAG 597
consensus_8847#1      TTCTGGAAAATTATGACTGTGGCAAGT--GCAACTCCTAGGCGACATTTTTTTATGTAAA 340
consensus_8847#2      CGGCGGAGGTACGGGCTTGTGGAGTACCCGGCGCTCCCGGGCTACATGCGGGACAACGAG 60
                          ***       *  *****       *   ** *  *** ****           * 

consensus_8847#0      TACATCCTGCGCCACTACCGCTGCGAGTGGCCGCTCCCGCAGGTGCTCCTCTCCGCCTTC 657
consensus_8847#1      AAAGTTAT-CAATGTGATTAATGCAGGAATACGTCTGCTAAGTTACTTTTCCTGATATAC 399
consensus_8847#2      TACATCCTGCGCCACTACCGCTGCGAGTGGCCGCTCCCGCAGGTGCTCCTCTCCGCCTTC 120
                       *  *  * *      *    ***  *    **    *  ** * **  **      * *

consensus_8847#0      TCCATCCACAACGAGACCCTCAACGTCTGGACGCACTTGATAGGATTTTTCATCTTTCTT 717
consensus_8847#1      TAAAGCTGTTTTTTAATTTGTGAACTC---AGGCACTTGATAGGATTTTTCGTCTTTCTT 456
consensus_8847#2      TCCATCCACAACGAGACCCTCAANGTCTGGACGTACGT-------TCCCTCG--TTCCTT 171
                      *  * *         *      *  **   * * ** *       *   **   ** ***

consensus_8847#0      GTTCTTACCATATACACCGCAACACAAGTTCCAAATGTAGTAGATCTTCAAAGTCTGCAG 777
consensus_8847#1      GTTCTTACCATATACACCGCAACACAAGTTCCAAATGTAGTAGATCTTCAAGGTCTGCAG 516
consensus_8847#2      TNTCCGTCTCTCCTCCCCCCCTCTCGA-TTGATTGTGCGGTTGAATTTCCTGTCATGTGA 230
                        **   *  *   * ** *  * * * **     **  ** **  ***      **   

consensus_8847#0      CATTTACCTGATGTGCTGAGAAACGCTGATCTTCATAAGATTCAGACAGAACTTGTGGCA 837
consensus_8847#1      CATTTACCTGATGTGCTGAGAAACGCTGATCTTCATAAGATTCAGACAGAACTTGTGGCA 576
consensus_8847#2      GAAGGAGGTTAAGTTGTTCATTGCACGGG---TAATGCGGT--GGAAAGGAGATGTGACA 285
                       *   *  * * **  *      * * *    * **  * *   ** ** *  **** **

consensus_8847#0      T-GCCTTCCTTCGTTACCTCACCTTTCTGACTTGCAAAAGCTGAAGGATGAATTGAAAAG 896
consensus_8847#1      T-GCCTTCCTTCGTTACCTCACCTTTCTGACTTGCAAAAGCTGAAGGATGAATTGAAAAG 635
consensus_8847#2      TCGATTTCTTTCATGGATGGATCTGTTATAC-----GGAGC--AAAGA--AATTG----G 332
                      * *  *** *** *      * ** *   **       ***  ** **  *****    *

consensus_8847#0      CTCATGGAATTCAATTGAGGTGCTTCCATCATTG-TCCCGTTGGCACCTCTTGGAGTTAC 955
consensus_8847#1      CTCATGGAATTCAATTGAGGTGCTTCCATCATTGGTCCCGTTGGCACCTCTTGGAGNTAC 695
consensus_8847#2      TCTATAGA-------TCGGGCGTTCGAAACATC--TCTTGTCTGC-----TTGTGGATGC 378
                         ** **       *  ** * *   * ***   **  **  **     ***  * * *

consensus_8847#0      TATCAAGTTGCTTGCCGCACAGATTTACTCATTCCAATGAAACCAGTC-TGTCTGTTCTT 1014
consensus_8847#1      TATCAAGNTGCTTGCCGCACAGATTTACTCATTCCAATGAAANCAGTCCTGTCTGNTCTT 755
consensus_8847#2      TAT--AGCTTTATGTTTC--AGGCTGGATAAATCCCATACAACATATTTCTTCTGGCATT 434
                      ***  ** *   **   *  **  *   * * *** **  **    *    ****   **

consensus_8847#0      CAAAGCATGAAGGAAGATATAGCAAACATGATTGCGCCACAGTTGATTAGGCCAATTCCG 1074
consensus_8847#1      CAA--------------------------------------------------------- 758
consensus_8847#2      GGGTATTTGAAGTCTGAATCTTGAAATA---TTAGGCTGCCCTCAA-------AATATC- 483
                                                                                  

consensus_8847#0      AGATGGCCATTTTATGCCTTCTTGGGAGGAGCAATGTTTTGCCTTCTTGCCAGCAGCACA 1134
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ---TAGCCATTCTGTAGATTTTTGC---------TCTTGTGCTTATTTACTAAT----TT 527
                                                                                  

consensus_8847#0      TGCCATCTTCTCTCCTGCCACTCCCGTCGCCTTGCATACATTATGCTTCGCCTTGATTAT 1194
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ATTTATTTATTTTATTTGAATATTCTCAATAGTGCATAGTTTTGTAGTTGTGTAAATTAG 587
                                                                                  

consensus_8847#0      GCAGGCATTGCTGCTCTTATCGCAACATCATTCTACCCTCCAGTATACTATTCTTTCATG 1254
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      GGAGGC--CAAGGCTTACAGTTTCTAAACAGTCTGGTATTCAATTTACCTACCTTTC--- 642
                                                                                  

consensus_8847#0      TGCTATCCATTCTTTTGCAACCTGTATCTCAGCTGCATAACTATTTTAGGAGTGGCAACT 1314
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------TCTCTACTTTAAAGACTAAACTCAATTTGCTCAAAAAAAAAAA----------- 685
                                                                                  

consensus_8847#0      ATTGCTTTCTCTTTACTCCCTGTTTTCCAGAACCCTGAGTTTCGGACCATACGAGCATGC 1374
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      CTCTTCTTTGGCATGGGTGCATCCGGCGTGATCCCTGTCATTCACAAATTGATCCTCTTT 1434
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      TGGCACCAACCAGAGGCATTGCACACTACCGCATATGAGGTTCTGATGGGCCTTTTCTAT 1494
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      GGCATTGGGGCACTGGTGTATGCAACTCGGGTGCCCGAGCGCTGGATGCCTGGAAAATTT 1554
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      GACATTGCTGGTCATAGCCACCAGCTTTTTCATGTGTTAGTTGTTGCTGGAGCATACACA 1614
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      CACTATCATTCTGGACTGGTATACCTCAAGTGGAGAGACGTGCAAGGCTGCTAGAAATTA 1674
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      TCTGTGTGCTCGTAGGATGTGGATAGATTGTAGGTGCCCTGCTTGTGTCCCGAAAAAGAG 1734
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      GACCGCTGATTCTCTCTCGTCTTCAGAAACAAAAGATGACTGTTGTTGTTGGCCAAAAGA 1794
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      CTAGACCTGGTCTGTTGTAAAATGTAACGGAGGACTTGCTAGTACTGTGAGATACAAATT 1854
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      GATAATGAGTGATGATCGGTACCTGTAAACTGTGGTGTGGTATTGGCTGATTTTTCAGGG 1914
consensus_8847#1      ------------------------------------------------------------
consensus_8847#2      ------------------------------------------------------------
                                                                                  

consensus_8847#0      TGCAACTCACTTGATAA 1931
consensus_8847#1      -----------------
consensus_8847#2      -----------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)