|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8864#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 3256 fasta sequence
[AGAGAGAATTGTGGCGTGGGGGAGTCACTGAAACCGTGAAACGAAAGCTGATTATGGATCTGGTCGTCGGCGCGTCGAGCGGCGCCGTGAAGTCGCTCGTCAACAAGCTGGGCACCCTCCTGGCGCAGGAGTACACCCTCATCTCCGGCGTCCGCGACGACATCCAGTACATCAACGACGAGCTCGCCAGCATGCAGGCCTTCCTCAGCAGGCTCAAGCGGGACGTCGCCCACGACGAGCAGCGTCAGGACTGGATGAAGCAGGTGCGCGAGGTCGCCTACGACATCGAGGACTGCGTCGACGACGTCCGCCACCGCCTCGGCGGCGAGCCCCGCGGGACCGGCACAGTTGTCTCCCTCAAGAGGACGTGGTACCTGCTCACCACGCTGTACCAGCGCTGCTGCATCGCCACCGACATCGGCAACCTCAAGGTCAGGGCGCAGCATGTCAGCGAGCGGCGCACCAGGTACGGGGTGGAGAACCTCCCAGCAAACAGAAATGGTGGCGGCAACAACAACTCCGGCGCTCCCGGAGACCATCCAGCTCCTCTCCCCCGGCTGATTGGCACCACTGAACCTGTAGGCATGGACGACGCCATGAACGACCTTCAAAGATGGTTCATGGTCTCAAAGCAGAACAGCCAAATCAGTTACCTTGCTATCGTCGGATCCGGTGGGCTTGGCAAAACCACACTCGCAATGTCATTTTACCGCAAGTTTGGAGATGAGTTTGATTCCAGAGCGTTCATGCTCGCGTCGCAGAAGTTTCATCTCCCAACAGTTTTGAGAAGCCTTGTCAGCCAGTTCCATCAGAAGCAGGTCAGCGCTTCTGAGGATGCTCTTCACGGAATTGAGGAATGGGGAGTTGAAGCCCTCAAGAAGAAGCTCGCTGATCAACTGCAAGGCAAGAGGTACCATATCTTGATTGATGACATATGGTCTGTATCAGCATGGGAAAGTATTAGGGATTCATTACCTAAGAATAATAAGGGTAGTTGCGTAATTGTGACTACCAGGTTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAAAATGGTCATGTGCACAAGCTCAAACAGCTCGATCCAGTGAACTCCAGCAAATTGTTTCTTCAAATAATATATGCTAATGATCCGTGTCCCACTCCAACCATTAATGATGAGATTGTCGTGAAGATGTGTGGTGGTCTGCCTTTGGCCATAATAGTAGTGTCAGGGCTCATTGCTAGTGAACTGAAATCAAAGATTGGAAAGCCATTGGATCAGAAATTGATTGAGGTGGAGAAGGCTTTAAGGGCAGAGTTGGGAAACAATCTCACCACAGAAGTAGTGCAGATAATTAACCACTGCTACAAAAATCTGCCACCTGACCTTAAGACATGTTTGCTCTACTTGAGTACATTTCCAAAGGGCCGCAATATTAGCAGGAAACGATTGATAAGAAGATGGGTTGCTGAAGGGTTCGTTACTGAGAAACATGGGCAGACGGCAGAGGAAGTTGCAGAAGACAACTTCAATGAGCTCATTGGCAGGAACTTGATTCGGCCTATCAACAACAGCAGCAATGGGAAGGTGAAGAGCTGTCAAATTCATGACATGGTCCTTGAGTACATTGTCTCCAAATCTGGTGATGAGAATTTCATCACTGTAATTGGTAGCCACTGGCAGACACCGTTTCCAAGCTACAAGGTGCGGCGGTTGTCTGTCCATAAAAGTGATAGGCAAGAAACTGATCTAGTAGAGAGGATGAAGTTGTCGCATGTCCGATCTTTGACTGTGTTGGAGAGTTTCAAAGCTCTTCATTCTACTATGCTCAAATTCCAGATACTGCAGGTGTTGGATCTTGAAGGATGCAAGGACTTGTCGTCAAACCAGCTCAAGAAAATATGTAATATGCATCAGATGAAGTACCTAAGCTTGCGTGGGACGGACATATACAAGATACCGAAGAAAATAGGCAGGCTGGAGTATTTGGAGGTACTTGACATAAGGGACACGGATGTCACAAACTTGCCTGCATCAGTGGAGAGGCTTCAACGAATGGTCCATCTATTGGCTGGCAATAAAACCAAGCGGAGAGCATTGAGATTAACTGAAGGAATCACAAAGATGAAAACTATACAGACACTGTCTGGGATTGAGATCTCTGGAAGGTCAACCAGGACAGCAGCTGGGGAGCAGGCACCAGTTCTTGAAGTCATCAGAAATGCTACAACCACCGATGCCAAGGATGGAGATATCGCGGGCTTGCAAGGTACCCGTAAGGAAGGCAGCAAGGTGGATATGCCAAAACAATTGCGTCCGCTAGCAGCCTTGGAGAAGCTCACCAACCTTAAGAAACTTGCCATTTACAGGCTTGTTAATTTCCAAGCGAAAGATGATGAATTGTTGCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCTCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGCTTTCTTGACAGATCACTGAGTTCTTCACAAGCACAACCAGAACACCTTTACACCCTTGAGCTTTCTGGCAGCTTGTTTAAAGTGCCAGAATGGATTGACCGCTTGCACAACCTTGAGAAGCTTACTCTGTCCATGACTTCACTTACGACAGATACTTTGGTGACTCTTAGTAGGCTTCCTGAGCTTTTCTCTCTCATTTTTTCACTTGATGCAGCAAATGGTATTTCAAATATCCTCAAAACTGTGCAGAAGAATACATTGGAGTCAGGTGGTAAAATCTTTGTGCCGGATGGGGGGTTTACAAAGTTGAGGTTGCTCCGTTTTACGGCACCAGTGCTACCACCTCTGAGCTTCCTAGAAGGGGCAATGCCAGAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATCATTGAGTTTGTATACGGCCTGGAAAACCTTTCAAGTCTCCAACAGGTATTTCTGACCTTTAGCAGCCAGGCACCTGAAGATGCGAAAGAGAAGGTCTCTCAGATCAAAGGACTGGCAAGCAAGATTCGAAAGGCTGATTCCTCCAACATTAGTGTGGTGATAGATGAGTACAACGAATTATCAAAAGAACAATAGATTACCTAGTCATGATCTCCACAGTTGGAGGGAACCAGTGTGTTATCGATGTGTTGTACCTACTCCATCTACAGTCTGTTTTTGTTTTATGATTTTCAGATCTATTTACAATTTTTTGTACTGTTTTTTTGTTGAGCTGTGGCATCTTTGTTTTGTCTGCTGTACTCCCAAAACTCTGCTAGTGAAAAAAAATATATCTT]
[+] EMBL AK065351 [AGAGAGAATTGTGGCGTGGGGGAGTCACTGAAACCGTGAAACGAAAGCTGATTATGGATCTGGTCGTCGGCGCGTCGAGCGGCGCCGTGAAGTCGCTCGTCAACAAGCTGGGCACCCTCCTGGCGCAGGAGTACACCCTCATCTCCGGCGTCCGCGACGACATCCAGTACATCAACGACGAGCTCGCCAGCATGCAGGCCTTCCTCAGCAGGCTCAAGCGGGACGTCGCCCACGACGAGCAGCGTCAGGACTGGATGAAGCAGGTGCGCGAGGTCGCCTACGACATCGAGGACTGCGTCGACGACGTCCGCCACCGCCTCGGCGGCGAGCCCCGCGGGACCGGCACAGTTGTCTCCCTCAAGAGGACGTGGTACCTGCTCACCACGCTGTACCAGCGCTGCTGCATCGCCACCGACATCGGCAACCTCAAGGTCAGGGCGCAGCATGTCAGCGAGCGGCGCACCAGGTACGGGGTGGAGAACCTCCCAGCAAACAGAAATGGTGGCGGCAACAACAACTCCGGCGCTCCCGGAGACCATCCAGCTCCTCTCCCCCGGCTGATTGGCACCACTGAACCTGTAGGCATGGACGACGCCATGAACGACCTTCAAAGATGGTTCATGGTCTCAAAGCAGAACAGCCAAATCAGTTACCTTGCTATCGTCGGATCCGGTGGGCTTGGCAAAACCACACTCGCAATGTCATTTTACCGCAAGTTTGGAGATGAGTTTGATTCCAGAGCGTTCATGCTCGCGTCGCAGAAGTTTCATCTCCCAACAGTTTTGAGAAGCCTTGTCAGCCAGTTCCATCAGAAGCAGGTCAGCGCTTCTGAGGATGCTCTTCACGGAATTGAGGAATGGGGAGTTGAAGCCCTCAAGAAGAAGCTCGCTGATCAACTGCAAGGCAAGAGGTACCATATCTTGATTGATGACATATGGTCTGTATCAGCATGGGAAAGTATTAGGGATTCATTACCTAAGAATAATAAGGGTAGTTGCGTAATTGTGACTACCAGGTTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAAAATGGTCATGTGCACAAGCTCAAACAGCTCGATCCAGTGAACTCCAGCAAATTGTTTCTTCAAATAATATATGCTAATGATCCGTGTCCCACTCCAACCATTAATGATGAGATTGTCGTGAAGATGTGTGGTGGTCTGCCTTTGGCCATAATAGTAGTGTCAGGGCTCATTGCTAGTGAACTGAAATCAAAGATTGGAAAGCCATTGGATCAGAAATTGATTGAGGTGGAGAAGGCTTTAAGGGCAGAGTTGGGAAACAATCTCACCACAGAAGTAGTGCAGATAATTAACCACTGCTACAAAAATCTGCCACCTGACCTTAAGACATGTTTGCTCTACTTGAGTACATTTCCAAAGGGCCGCAATATTAGCAGGAAACGATTGATAAGAAGATGGGTTGCTGAAGGGTTCGTTACTGAGAAACATGGGCAGACGGCAGAGGAAGTTGCAGAAGACAACTTCAATGAGCTCATTGGCAGGAACTTGATTCGGCCTATCAACAACAGCAGCAATGGGAAGGTGAAGAGCTGTCAAATTCATGACATGGTCCTTGAGTACATTGTCTCCAAATCTGGTGATGAGAATTTCATCACTGTAATTGGTAGCCACTGGCAGACACCGTTTCCAAGCTACAAGGTGCGGCGGTTGTCTGTCCATAAAAGTGATAGGCAAGAAACTGATCTAGTAGAGAGGATGAAGTTGTCGCATGTCCGATCTTTGACTGTGTTGGAGAGTTTCAAAGCTCTTCATTCTACTATGCTCAAATTCCAGATACTGCAGGTGTTGGATCTTGAAGGATGCAAGGACTTGTCGTCAAACCAGCTCAAGAAAATATGTAATATGCATCAGATGAAGTACCTAAGCTTGCGTGGGACGGACATATACAAGATACCGAAGAAAATAGGCAGGCTGGAGTATTTGGAGGTACTTGACATAAGGGACACGGATGTCACAAACTTGCCTGCATCAGTGGAGAGGCTTCAACGAATGGTCCATCTATTGGCTGGCAATAAAACCAAGCGGAGAGCATTGAGATTAACTGAAGGAATCACAAAGATGAAAACTATACAGACACTGTCTGGGATTGAGATCTCTGGAAGGTCAACCAGGACAGCAGCTGGGGAGCAGGCACCAGTTCTTGAAGTCATCAGAAATGCTACAACCACCGATGCCAAGGATGGAGATATCGCGGGCTTGCAAGGTACCCGTAAGGAAGGCAGCAAGGTGGATATGCCAAAACAATTGCGTCCGCTAGCAGCCTTGGAGAAGCTCACCAACCTTAAGAAACTTGCCATTTACAGGCTTGTTAATTTCCAAGCGAAAGATGATGAATTGTTGCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCTCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGCTTTCTTGACAGATCACTGAGTTCTTCACAAGCACAACCAGAACACCTTTACACCCTTGAGCTTTCTGGCAGCTTGTTTAAAGTGCCAGAATGGATTGACCGCTTGCACAACCTTGAGAAGCTTACTCTGTCCATGACTTCACTTACGACAGATACTTTGGTGACTCTTAGTAGGCTTCCTGAGCTTTTCTCTCTCATTTTTTCACTTGATGCAGCAAATGGTATTTCAAATATCCTCAAAACTGTGCAGAAGAATACATTGGAGTCAGGTGGTAAAATCTTTGTGCCGGATGGGGGGTTTACAAAGTTGAGGTTGCTCCGTTTTACGGCACCAGTGCTACCACCTCTGAGCTTCCTAGAAGGGGCAATGCCAGAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATCATTGAGTTTGTATACGGCCTGGAAAACCTTTCAAGTCTCCAACAGGTATTTCTGACCTTTAGCAGCCAGGCACCTGAAGATGCGAAAGAGAAGGTCTCTCAGATCAAAGGACTGGCAAGCAAGATTCGAAAGGCTGATTCCTCCAACATTAGTGTGGTGATAGATGAGTACAACGAATTATCAAAAGAACAATAGATTACCTAGTCATGATCTCCACAGTTGGAGGGAACCAGTGTGTTATCGATGTGTTGTACCTACTCCATCTACAGTCTGTTTTTGTTTTATGATTTTCAGATCTATTTACAATTTTTTGTACTGTTTTTTTGTTGAGCTGTGGCATCTTTGTTTTGTCTGCTGTACTCCCAAAACTCTGCTAGTGAAAAAAAATATATCTT]
consensusID : consensus_8864#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2376 fasta sequence
[TAGGGATTCATTCCCCAAGAGTGATAAGGGTAGTTGTGTAGTGGTGACTACAAGGTTTAACTCTGTAGCTGAAGCCTCCGCCGTCAACAAGGTCATGTGCACAAGCTCAAACAGCTCGATCCAGAGAGCTCCTACAATTTGTTTCTTCAGATAATATCTGCTAATGATCTGTGTCCCATTAGACCTATTAATGCTCGCATTATCATGAAAACGTGTGGGGGTCTGCCTTTGGCAATTGTAGTAGTAGCAGGGCTGATTGCTAGTAAAATGAAATCAAAGATTGACCTGACATTGGATCAGCATTTGGTTGATGTAGATGAGGCTTTAAGTGCAGAGTTGGGAAGCAATCTCACCACCGAAGGAGTAACGCAAATAATTAACCACTGTTACAAAAATCTGCCACCTGATCTTAAGACATGCTTGCTGTACTTGAGCACATTTCCCAAGGGCCGCAGTATTAGCAGGAAGCATTTGATAAGAAGATGGATTGCTGAAGGATTCATTACTGAAGAGCATGGGAAGACTGCTGAGGAAGTTGCAGAAGACAGCCTCAATGAACTCATTGGCAGGAACTTGATAAAGCCTATCAAATACAGCAGCAACGGCAGGGTGAAGAGCTGCCAAATTCATGACATGGTCCTCCAGTACATTGTCTCCAAGTCTAGTGATGAGAATTTCATCGCCGTTATTGGCGGCCACTGGCAGACACCACTTCCAAGCTACAAGGTACGGCGATTGTCTGTCCATAAAAGTGATAAGCAAGAAACAGACATGGTAGAGAGGATGAAATTGTCCCATGTCCGATCCTTGACAGTATTGGAGAGTTTCAGTGCTCTTCATTCTACTATGCTCAAGTTCCAGATACTGCAGGTATTGGACCTTGATGGCTGCAAGGACTTGTCCCACCCACATCAGCTCAAGAAAATATGCAACATGTATCAGTTGAAGTACCTGGGCTTGCGGCGGACAGATATTGACAAGATCCCGAAGAATATAGGGAGGCTGGAGTACTTGGAGGTACTGGACATTAGGGAGACAAATGTCAGAAAGTTGCCTACATCATTTGCAAAGCTTCAGCGAATGACCCATCTACTTGCTGGCAACAAAAGCAAGCGGACAGCATTGAAATTAACTGAGGAAATTACAAAGGTCGTAGCTCTACAAACACTTTCCGGGATTGAGATCAGTGGAAGCTCAACTTTAGAAGAAGACCGGGAGCAGCCACGAGATATGCCCATCAGACACTCTACAACCACCAGAGCCGAGGAGAGAGGCAACACTGCCTTGCATGGTCCACATAAAGAAGCTAGCAAAGTGGACCTTCCAAAACAGCTGCGTCCTCTTGAAGCCTTGGAGAAGCTCACCAACCTTAAGAAACTTGCCATTTACAAGCTTGTAAAGTTCCAAGCGAAAGACGATGAGTTACTGCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCCCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGTTTCCTTGAAAGCTCACTGAGTTCTTCGCAAGCAGCACCAGAACACCTGTACACCCTCGAGCTTTCTGGCAGTTATCTAAAGCGCCTGGATGGATTGACCGCCTGCACAACCTTGAGAAGCTTACTCTGTCATTGACTTCACTTAAGACAGATACTTTGGTGGTTCTGAGTAGCCTGCCTGAGTTATTCTCTCTCACTTTTTCACTCCATGCAGCAGACAATGATTCAAATGCTCTCAAAATAATACATAGGAATACAATGAAGTCAGGAGGTAAGATCTTTGTGCTGGATGAGGGATTTGAAAAGCTGAAGCTACTGCATTTTGCGGCACCTGTGCTACCTTCTCTGAGCTTTCTAGAAGGAGCTATGCCGGAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATGGTGGACTATATGTATGGTCTGGAAAACCTCTCAAAGCTGGGGAGCCCATGATGGCCTCTTGAAGTCTTGATGAGCCCTGATCCTCGGGCTAGCTGGTAGCTAAGCCGCGGCAGTTGAAAGATGAGAGAAGAAAGACGCATCACGCCAAAACTGTAATTTTACTTCCCCATCTGGCTATATAAATCCAAGGCAGAAGCAAAGGGTCGGTTTCCTCCTCGGCATTCTATCAAACAGTTCGTGGGCAACAAATATTTGTAGCCTTCAGACCATCTGCAACTGCAAGCTAGGCCCCAACCTTCGATCTGCAGAATGCATCTGGTGATACATGATACTCCCGGAAGAGGCAAGATAGCCTCCACATTCCCCCTCCTCCGGGCACACGGCCGCCGGTCACCGGTCGCCGGTGAGGTAGCCGACGCCCGACGCGGACACGGCGGCGGGGAGGCCGGAAGGCCACCGCCGGTGAGAGTGGTAT]
[-] EMBL AK073861 [TAGGGATTCATTCCCCAAGAGTGATAAGGGTAGTTGTGTAGTGGTGACTACAAGGTTTAACTCTGTAGCTGAAGCCTCCGCCGTCAACAAGGTCATGTGCACAAGCTCAAACAGCTCGATCCAGAGAGCTCCTACAATTTGTTTCTTCAGATAATATCTGCTAATGATCTGTGTCCCATTAGACCTATTAATGCTCGCATTATCATGAAAACGTGTGGGGGTCTGCCTTTGGCAATTGTAGTAGTAGCAGGGCTGATTGCTAGTAAAATGAAATCAAAGATTGACCTGACATTGGATCAGCATTTGGTTGATGTAGATGAGGCTTTAAGTGCAGAGTTGGGAAGCAATCTCACCACCGAAGGAGTAACGCAAATAATTAACCACTGTTACAAAAATCTGCCACCTGATCTTAAGACATGCTTGCTGTACTTGAGCACATTTCCCAAGGGCCGCAGTATTAGCAGGAAGCATTTGATAAGAAGATGGATTGCTGAAGGATTCATTACTGAAGAGCATGGGAAGACTGCTGAGGAAGTTGCAGAAGACAGCCTCAATGAACTCATTGGCAGGAACTTGATAAAGCCTATCAAATACAGCAGCAACGGCAGGGTGAAGAGCTGCCAAATTCATGACATGGTCCTCCAGTACATTGTCTCCAAGTCTAGTGATGAGAATTTCATCGCCGTTATTGGCGGCCACTGGCAGACACCACTTCCAAGCTACAAGGTACGGCGATTGTCTGTCCATAAAAGTGATAAGCAAGAAACAGACATGGTAGAGAGGATGAAATTGTCCCATGTCCGATCCTTGACAGTATTGGAGAGTTTCAGTGCTCTTCATTCTACTATGCTCAAGTTCCAGATACTGCAGGTATTGGACCTTGATGGCTGCAAGGACTTGTCCCACCCACATCAGCTCAAGAAAATATGCAACATGTATCAGTTGAAGTACCTGGGCTTGCGGCGGACAGATATTGACAAGATCCCGAAGAATATAGGGAGGCTGGAGTACTTGGAGGTACTGGACATTAGGGAGACAAATGTCAGAAAGTTGCCTACATCATTTGCAAAGCTTCAGCGAATGACCCATCTACTTGCTGGCAACAAAAGCAAGCGGACAGCATTGAAATTAACTGAGGAAATTACAAAGGTCGTAGCTCTACAAACACTTTCCGGGATTGAGATCAGTGGAAGCTCAACTTTAGAAGAAGACCGGGAGCAGCCACGAGATATGCCCATCAGACACTCTACAACCACCAGAGCCGAGGAGAGAGGCAACACTGCCTTGCATGGTCCACATAAAGAAGCTAGCAAAGTGGACCTTCCAAAACAGCTGCGTCCTCTTGAAGCCTTGGAGAAGCTCACCAACCTTAAGAAACTTGCCATTTACAAGCTTGTAAAGTTCCAAGCGAAAGACGATGAGTTACTGCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCCCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGTTTCCTTGAAAGCTCACTGAGTTCTTCGCAAGCAGCACCAGAACACCTGTACACCCTCGAGCTTTCTGGCAGTTATCTAAAGCGCCTGGATGGATTGACCGCCTGCACAACCTTGAGAAGCTTACTCTGTCATTGACTTCACTTAAGACAGATACTTTGGTGGTTCTGAGTAGCCTGCCTGAGTTATTCTCTCTCACTTTTTCACTCCATGCAGCAGACAATGATTCAAATGCTCTCAAAATAATACATAGGAATACAATGAAGTCAGGAGGTAAGATCTTTGTGCTGGATGAGGGATTTGAAAAGCTGAAGCTACTGCATTTTGCGGCACCTGTGCTACCTTCTCTGAGCTTTCTAGAAGGAGCTATGCCGGAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATGGTGGACTATATGTATGGTCTGGAAAACCTCTCAAAGCTGGGGAGCCCATGATGGCCTCTTGAAGTCTTGATGAGCCCTGATCCTCGGGCTAGCTGGTAGCTAAGCCGCGGCAGTTGAAAGATGAGAGAAGAAAGACGCATCACGCCAAAACTGTAATTTTACTTCCCCATCTGGCTATATAAATCCAAGGCAGAAGCAAAGGGTCGGTTTCCTCCTCGGCATTCTATCAAACAGTTCGTGGGCAACAAATATTTGTAGCCTTCAGACCATCTGCAACTGCAAGCTAGGCCCCAACCTTCGATCTGCAGAATGCATCTGGTGATACATGATACTCCCGGAAGAGGCAAGATAGCCTCCACATTCCCCCTCCTCCGGGCACACGGCCGCCGGTCACCGGTCGCCGGTGAGGTAGCCGACGCCCGACGCGGACACGGCGGCGGGGAGGCCGGAAGGCCACCGCCGGTGAGAGTGGTAT]
consensusID : consensus_8864#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2316 fasta sequence
[AAATGTTATTTAAAGAGCAACTTTTACAGTACTTTCTCAAGTACTGTAAAATCACACTCTATTTACAACTACAAGTACCATCAAAGCACACTCTATTTACAACTACTTACTTCTAAACAATTCCTGAACAGGTACCATATCTTGATTGATGACATATGGTCTGTATCAGCATGGGAAAGTATTAGGGATTCATTACCTAAGAATAATAAGGGTAGTTGCGTAATTGTGACTACCAGGTTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAAAATGGTCATGTGCACAAGCTCAAACAGCTCGATCCAGTGAACTCCAGCAAATTGTTTCTTCAAATAATATATGCTAATGATCCGTGTCCCACTCCAACCATTAATGATGAGATTGTCGTGAAGATGTGTGGTGGTCTGCCTTTGGCCATAATAGTAGTGTCAGGGCTCATTGCTAGTGAACACAGAAGTAGTGCAGATAATTAACCACTGCTACAAAAATCTGCCACCTGACCTTAAGACATGTTTGCTCTACTTGAGTACATTTCCAAAGGGCCGCAATATTAGCAGGAAACGATTGATAAGAAGATGGGTTGCTGAAGGGTTCGTTACTGAGAAACATGGGCAGACGGCAGAGGAAGTTGCAGAAGACAACTTCAATGAGCTCATTGGCAGGAACTTGATTCGGCCTATCAACAACAGCAGCAATGGGAAGGTGAAGAGCTGTCAAATTCATGACATGGTCCTTGAGTACATTGTCTCCAAATCTGGTGATGAGAATTTCATCACTGTAATTGGTAGCCACTGGCAGACACCGTTTCCAAGCTACAAGGTGCGGCGGTTGTCTGTCCATAAAAGTGATAGGCAAGAAACTGATCTAGTAGAGAGGATGAAGTTGTCGCATGTCCGATCTTTGACTGTGTTGGAGAGTTTCAAAGCTCTTCATTCTACTATGCTCAAATTCCAGATACTGCAGGTGTTGGATCTTGAAGGATGCAAGGACTTGTCGTCAAACCAGCTCAAGAAAATATGTAATATGCATCAGATGAAGTACCTAAGCTTGCGTGGGACGGACATATACAAGATACCGAAGAAAATAGGCAGGCTGGAGTATTTGGAGGTACTTGACATAAGGGACACGGATGTCACAAACTTGCCTGCATCAGTGGAGAGGCTTCAACGAATGGTCCATCTATTGGCTGGCAATAAAACCAAGCGGAGAGCATTGAGATTAACTGAAGGAATCACAAAGATGAAAACTATACAGACACTGTCTGGGATTGAGATCTCTGGAAGGTCAACCAGGACAGCAGCTGGGGAGCAGGCACCAGTTCTTGAAGTCATCAGAAATGCTACAACCACCGATGCCAAGGATGGAGATATCGCGGGCTTGCAAGGTACCCGTAAGGAAGGCAGCAAGGTGGATATGCCAAAACAATTGCGTCCGCTAGCAGCCTTGGAGAAGCTCACCAACCTTAAGAAACTTGCCATTTACAGGCTTGTTAATTTCCAAGCGAAAGATGATGAATTGTTGCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCTCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGCTTTCTTGACAGATCACTGAGTTCTTCACAAGCACAACCAGAACACCTTTACACCCTTGAGCTTTCTGGCAGCTTGTTTAAAGTGCCAGAATGGATTGACCGCTTGCACAACCTTGAGAAGCTTACTCTGTCCATGACTTCACTTACGACAGATACTTTGGTGACTCTTAGTAGGCTTCCTGAGCTTTTCTCTCTCATTTTTTCACTTGATGCAGCAAATGGTATTTCAAATATCCTCAAAACTGTGCAGAAGAATACATTGGAGTCAGGTGGTAAAATCTTTGTGCCGGATGGGGGGTTTACAAAGTTGAGGTTGCTCCGTTTTACGGCACCAGTGCTACCACCTCTGAGCTTCCTAGAAGGGGCAATGCCAGAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATCATTGAGTTTGTATACGGCCTGGAAAACCTTTCAAGTCTCCAACAGGTATTTCTGACCTTTAGCAGCCAGGCACCTAGTAAGCCGTGGTCCTCCTGATGAGCCATGGTGCTCGACCTGCCGATGGTTGGGTGGAGGCCGACGAAGGAAGACGTGAAAAGGGGATCCGACCTCGGAGGAGGAGGAGGTGCATGCGCGGAGATGTAGCGGCGACGCCGGCGTGGACGGCACAGGGATGCCGCGCCCGCGCGTGGGCAGGAGGTGGAGAAGGGGGGCGCCGGCGGGGAGGACGTGCGCCGTGTCCCTCCGGTGGCCGGAGCGGA]
[-] EMBL AK105448 [AAATGTTATTTAAAGAGCAACTTTTACAGTACTTTCTCAAGTACTGTAAAATCACACTCTATTTACAACTACAAGTACCATCAAAGCACACTCTATTTACAACTACTTACTTCTAAACAATTCCTGAACAGGTACCATATCTTGATTGATGACATATGGTCTGTATCAGCATGGGAAAGTATTAGGGATTCATTACCTAAGAATAATAAGGGTAGTTGCGTAATTGTGACTACCAGGTTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAAAATGGTCATGTGCACAAGCTCAAACAGCTCGATCCAGTGAACTCCAGCAAATTGTTTCTTCAAATAATATATGCTAATGATCCGTGTCCCACTCCAACCATTAATGATGAGATTGTCGTGAAGATGTGTGGTGGTCTGCCTTTGGCCATAATAGTAGTGTCAGGGCTCATTGCTAGTGAACACAGAAGTAGTGCAGATAATTAACCACTGCTACAAAAATCTGCCACCTGACCTTAAGACATGTTTGCTCTACTTGAGTACATTTCCAAAGGGCCGCAATATTAGCAGGAAACGATTGATAAGAAGATGGGTTGCTGAAGGGTTCGTTACTGAGAAACATGGGCAGACGGCAGAGGAAGTTGCAGAAGACAACTTCAATGAGCTCATTGGCAGGAACTTGATTCGGCCTATCAACAACAGCAGCAATGGGAAGGTGAAGAGCTGTCAAATTCATGACATGGTCCTTGAGTACATTGTCTCCAAATCTGGTGATGAGAATTTCATCACTGTAATTGGTAGCCACTGGCAGACACCGTTTCCAAGCTACAAGGTGCGGCGGTTGTCTGTCCATAAAAGTGATAGGCAAGAAACTGATCTAGTAGAGAGGATGAAGTTGTCGCATGTCCGATCTTTGACTGTGTTGGAGAGTTTCAAAGCTCTTCATTCTACTATGCTCAAATTCCAGATACTGCAGGTGTTGGATCTTGAAGGATGCAAGGACTTGTCGTCAAACCAGCTCAAGAAAATATGTAATATGCATCAGATGAAGTACCTAAGCTTGCGTGGGACGGACATATACAAGATACCGAAGAAAATAGGCAGGCTGGAGTATTTGGAGGTACTTGACATAAGGGACACGGATGTCACAAACTTGCCTGCATCAGTGGAGAGGCTTCAACGAATGGTCCATCTATTGGCTGGCAATAAAACCAAGCGGAGAGCATTGAGATTAACTGAAGGAATCACAAAGATGAAAACTATACAGACACTGTCTGGGATTGAGATCTCTGGAAGGTCAACCAGGACAGCAGCTGGGGAGCAGGCACCAGTTCTTGAAGTCATCAGAAATGCTACAACCACCGATGCCAAGGATGGAGATATCGCGGGCTTGCAAGGTACCCGTAAGGAAGGCAGCAAGGTGGATATGCCAAAACAATTGCGTCCGCTAGCAGCCTTGGAGAAGCTCACCAACCTTAAGAAACTTGCCATTTACAGGCTTGTTAATTTCCAAGCGAAAGATGATGAATTGTTGCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCTCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGCTTTCTTGACAGATCACTGAGTTCTTCACAAGCACAACCAGAACACCTTTACACCCTTGAGCTTTCTGGCAGCTTGTTTAAAGTGCCAGAATGGATTGACCGCTTGCACAACCTTGAGAAGCTTACTCTGTCCATGACTTCACTTACGACAGATACTTTGGTGACTCTTAGTAGGCTTCCTGAGCTTTTCTCTCTCATTTTTTCACTTGATGCAGCAAATGGTATTTCAAATATCCTCAAAACTGTGCAGAAGAATACATTGGAGTCAGGTGGTAAAATCTTTGTGCCGGATGGGGGGTTTACAAAGTTGAGGTTGCTCCGTTTTACGGCACCAGTGCTACCACCTCTGAGCTTCCTAGAAGGGGCAATGCCAGAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATCATTGAGTTTGTATACGGCCTGGAAAACCTTTCAAGTCTCCAACAGGTATTTCTGACCTTTAGCAGCCAGGCACCTAGTAAGCCGTGGTCCTCCTGATGAGCCATGGTGCTCGACCTGCCGATGGTTGGGTGGAGGCCGACGAAGGAAGACGTGAAAAGGGGATCCGACCTCGGAGGAGGAGGAGGTGCATGCGCGGAGATGTAGCGGCGACGCCGGCGTGGACGGCACAGGGATGCCGCGCCCGCGCGTGGGCAGGAGGTGGAGAAGGGGGGCGCCGGCGGGGAGGACGTGCGCCGTGTCCCTCCGGTGGCCGGAGCGGA]
[+] EMBL CB096240 [ AGAAAATAGGCAGGCTGGAGTATTTGGAGGTACTTGACATAAGGGACACAGATGTCACAAACTTGCCTGCATCAGTGGAGAGGCTTCAACGAATGGTCCATCTATTGGCTGGCAATAAAACCAAGCGAAGGGCATTGAGATTAACTGAAGGAATCACAAAGATGACAACTATACAGACACTGCCTGGGATTGAGATCTCTGGAAGGTCAACCAAGAAAGCAGCTAGGGAGCAGGCACAAGTTATGGAAGTCATCAGAGATGCTTCAACCACCGATGCCAAGGATGGAGATATCACAGGCTTGCAAGGTACCCATAAGGAAGGCAGCAAGGTGGATATGCCAAAACAGTTGCGTCCGCTAGCAGCTTTGGAGAAGCTCACCAACCTTAAGAAACTTGCCATTTACAGGCTTGTTAATTTCCAAGCAAAAGATGATGAATTGCTGCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCTCTCAAGTTTCTTGCAATTGATGACAGTTTCACAGGCTTCCTTAACAGATCACTGAGTTCTTCACAAGCACAACCAGAACACCTTTACACCCTTGAGCTTTCTGGCAGCTTGNTTAAAGTGCCAGAATGGATTGACCGCTTACACAACCTTGAGAAGCTTACTCTGTCCTTGACTTCACTTACGACAGATACTTTGGTGACTCTTAGTANGCTTCCTGAGCTTTTCTCTCTCATTTTTTCACTTGGTGCAGCAAA GGAATTTCAAATATCCTCNAAACTGNGCATAA AATACATTGGAGTCAGGAGGTAAAATCTTTGGGCCAGATGGGGGGTTTAC AAGCTGAGGTTGCTGNGGTTTANAGNACCAGNGCTTCCANCCCTGA CTT ]
consensusID : consensus_8864#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 636 fasta sequence
[CCGGCTACATAAACAAAAAAAAAAAANAANACGNANGNNGGNGNGGGGGACGNNCGCGGNNGCCCCNANNATTGCAACCTACCGANNCTCGCCCTTCGCTTCTCTTCTCNTTTCCGTTTCTTTTTTTCNTCCTGTTGTTCGGAGGGAACANNNNGGGGGGNGGGGCGNGGGGNACGGAACGGAGGATGGANAAACCNCCCCGCACCCCCCCCNCCGTGTTTTGTTTGTTTGTGTTTTTNGGTNTNGGNGGNNNNNNNNNGGGNNAGGGGGGAGAAAAAAACGAAAAANNNAAAAAGGAAANNANANNANNNNNNNNCCCCCCCCCCCCCCCCGGGGGGGGGGGCCCCCCCCCCCTTGAAAAAAATTTGCCAAAAAAAAGAAAGGGTTCTCTTCAAGATCCAAAAGGGACTGGGCCAAAGCCAAAGATTCGAAAAGGCTGNTATTCCTCCAACATTAGTGTGGTGATAGATGAGTACAACGAATTATCAAAAGAACAATAGATTACCTAGTCATAATCTCCACAGTTGGAGGGAACTAGTGTGTTATCGATGTGTTGTACACACCTACTCCATCTGTAGTCTTTTTTGTTTTATGATTTTGTGATCTATTTACAAATTTCTGTAAAAAAAAAAAAAA]
[-] EMBL CA761159 [CCGGCTACATAAACAAAAAAAAAAAANAANACGNANGNNGGNGNGGGGGACGNNCGCGGNNGCCCCNANNATTGCAACCTACCGANNCTCGCCCTTCGCTTCTCTTCTCNTTTCCGTTTCTTTTTTTCNTCCTGTTGTTCGGAGGGAACANNNNGGGGGGNGGGGCGNGGGGNACGGAACGGAGGATGGANAAACCNCCCCGCACCCCCCCCNCCGTGTTTTGTTTGTTTGTGTTTTTNGGTNTNGGNGGNNNNNNNNNGGGNNAGGGGGGAGAAAAAAACGAAAAANNNAAAAAGGAAANNANANNANNNNNNNNCCCCCCCCCCCCCCCCGGGGGGGGGGGCCCCCCCCCCCTTGAAAAAAATTTGCCAAAAAAAAGAAAGGGTTCTCTTCAAGATCCAAAAGGGACTGGGCCAAAGCCAAAGATTCGAAAAGGCTGNTATTCCTCCAACATTAGTGTGGTGATAGATGAGTACAACGAATTATCAAAAGAACAATAGATTACCTAGTCATAATCTCCACAGTTGGAGGGAACTAGTGTGTTATCGATGTGTTGTACACACCTACTCCATCTGTAGTCTTTTTTGTTTTATGATTTTGTGATCTATTTACAAATTTCTGTAAAAAAAAAAAAAA]
consensusID : consensus_8864#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 580 fasta sequence
[GTAGTTGCGTAATTGTGACTACCAGGTTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAAAATGGTCATGTGCACAAGCTCAAACAGCTCGATCTAGAGAACTCCTACAATTTGTTTCTTCAGATAATATCTGCTAATGATCTGTGTCCCAGTAGACCCATTAACGTTAGCATTATCATGAGGATATGTGGAGGTCTGCCTTTGGCCATTGTAGTAGTAGCAGGGCTGATTGCTAGTAAACTGAAATCGAAGATTGACCTGACATTGGATCAGCATTTGGTTGATGTAGATGAGGCTTTAAGTGCAGAGTTGGGAAACAATCTTACCACAGAAGTAGTGCAGATAATTAACCACTGCTACAAAAATCTGCCACCTGATCTTAAGACATGTTTGCTCTACTTGAGTACATTTCCGAAGGGCCGCAATATTAGCAGGAAACGTTTGATAAGAAGATGGATTGCTGAAGGATTTGTTACTGAGAAACATGGGCAGACGGCAGAGGAAGTTGCAGAAGACAACTTCAATGAACTCATTGGCAGGAACTTGATTCGGCCTATCAACAACAGCAGCAATGGGAAGGT]
[-] EMBL CB000569 [GTAGTTGCGTAATTGTGACTACCAGGTTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAAAATGGTCATGTGCACAAGCTCAAACAGCTCGATCTAGAGAACTCCTACAATTTGTTTCTTCAGATAATATCTGCTAATGATCTGTGTCCCAGTAGACCCATTAACGTTAGCATTATCATGAGGATATGTGGAGGTCTGCCTTTGGCCATTGTAGTAGTAGCAGGGCTGATTGCTAGTAAACTGAAATCGAAGATTGACCTGACATTGGATCAGCATTTGGTTGATGTAGATGAGGCTTTAAGTGCAGAGTTGGGAAACAATCTTACCACAGAAGTAGTGCAGATAATTAACCACTGCTACAAAAATCTGCCACCTGATCTTAAGACATGTTTGCTCTACTTGAGTACATTTCCGAAGGGCCGCAATATTAGCAGGAAACGTTTGATAAGAAGATGGATTGCTGAAGGATTTGTTACTGAGAAACATGGGCAGACGGCAGAGGAAGTTGCAGAAGACAACTTCAATGAACTCATTGGCAGGAACTTGATTCGGCCTATCAACAACAGCAGCAATGGGAAGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 AGAGAGAATTGTGGCGTGGGGGAGTCACTGAAACCGTGAAACGAAAGCTGATTATGGATC 60
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 TGGTCGTCGGCGCGTCGAGCGGCGCCGTGAAGTCGCTCGTCAACAAGCTGGGCACCCTCC 120
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 TGGCGCAGGAGTACACCCTCATCTCCGGCGTCCGCGACGACATCCAGTACATCAACGACG 180
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 AGCTCGCCAGCATGCAGGCCTTCCTCAGCAGGCTCAAGCGGGACGTCGCCCACGACGAGC 240
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 AGCGTCAGGACTGGATGAAGCAGGTGCGCGAGGTCGCCTACGACATCGAGGACTGCGTCG 300
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 ACGACGTCCGCCACCGCCTCGGCGGCGAGCCCCGCGGGACCGGCACAGTTGTCTCCCTCA 360
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 AGAGGACGTGGTACCTGCTCACCACGCTGTACCAGCGCTGCTGCATCGCCACCGACATCG 420
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 GCAACCTCAAGGTCAGGGCGCAGCATGTCAGCGAGCGGCGCACCAGGTACGGGGTGGAGA 480
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 ACCTCCCAGCAAACAGAAATGGTGGCGGCAACAACAACTCCGGCGCTCCCGGAGACCATC 540
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 CAGCTCCTCTCCCCCGGCTGATTGGCACCACTGAACCTGTAGGCATGGACGACGCCATGA 600
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 ACGACCTTCAAAGATGGTTCATGGTCTCAAAGCAGAACAGCCAAATCAGTTACCTTGCTA 660
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 TCGTCGGATCCGGTGGGCTTGGCAAAACCACACTCGCAATGTCATTTTACCGCAAGTTTG 720
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------AAATGT 6
consensus_8864#0 GAGATGAGTTTGATTCCAGAGCGTTCATGCTCGCGTCGCAGAAGTTTCATCTCCCAACAG 780
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 TATTTAAAGAGCAACTTTTACAGTACTTTCTCAAGTACTGTAAAATCAC-----ACTCTA 61
consensus_8864#0 TTTTGAGAAGCCTTGTCAGCCAGTTCCATCAGAAGCAGGTCAGCGCTTCTGAGGATGCTC 840
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 TTTACAACTACAAGTACCATCAAAGCACACTCTATTTACAACTACTTACTTCTAAACAAT 121
consensus_8864#0 TTCACGGAATTGAGGAATGGGGAGTTGAAGCCCTCAAGAAGAAGCTCGCTGATCAACTGC 900
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ------------------------------------------------------------
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 TCCTGAACAGGTACCATATCTTGATTGATGACATATGGTCTGTATCAGCATGGGAAAGTA 181
consensus_8864#0 AAGGCAAGAGGTACCATATCTTGATTGATGACATATGGTCTGTATCAGCATGGGAAAGTA 960
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 -TAGGGATTCATTCCCCAAGAGTGATAAGGGTAGTTGTGTAGTGGTG----ACTACAAGG 55
consensus_8864#4 ------------------------------GTAGTTGCGTAATTGTG----ACTACCAGG 26
consensus_8864#2 TTAGGGATTCATTACCTAAGAATAATAAGGGTAGTTGCGTAATTGTG----ACTACCAGG 237
consensus_8864#0 TTAGGGATTCATTACCTAAGAATAATAAGGGTAGTTGCGTAATTGTG----ACTACCAGG 1016
consensus_8864#3 --CCGGCTACATAAACAAAAAAAAAAAANAANACGNANGNNGGNGNGGGGGACGNNCGCG 58
* * * * ** *
consensus_8864#1 TTTAACTCTGTAGCTGAAGCCT-CCGCCGTCAACAAGGTCATGTGCACAAGCTCAAACAG 114
consensus_8864#4 TTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAAAATGGTCATGTGCACAAGCTCAAACAG 86
consensus_8864#2 TTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAAAATGGTCATGTGCACAAGCTCAAACAG 297
consensus_8864#0 TTTAACTCTGTAGCTGAAGCCTGCCGCCGTCAAAATGGTCATGTGCACAAGCTCAAACAG 1076
consensus_8864#3 GNNGCCCCNANNATTGCAACCTACCG-----ANNCTCGCCCTTCGCTTCTCTTCT--CNT 111
* * ** * *** *** * * * * ** ** *
consensus_8864#1 CTCGATCCAGAGAGCTCCTACAATTTGTTTCTTCAGATAATATCTGCTAATGATCTGTGT 174
consensus_8864#4 CTCGATCTAGAGAACTCCTACAATTTGTTTCTTCAGATAATATCTGCTAATGATCTGTGT 146
consensus_8864#2 CTCGATCCAGTGAACTCCAGCAAATTGTTTCTTCAAATAATATATGCTAATGATCCGTGT 357
consensus_8864#0 CTCGATCCAGTGAACTCCAGCAAATTGTTTCTTCAAATAATATATGCTAATGATCCGTGT 1136
consensus_8864#3 TTCCGTTTCTTTTTTTCNTCCTG-TTGTTCGGAGGGAACANNNNGGGGGGNGGGGCGNGG 170
** * ** * ***** * * * * * *
consensus_8864#1 CCCATTAGACCTATTAATGCTCGCATTATCATGAAAACGT---GTGGGGGTCTGCCT-TT 230
consensus_8864#4 CCCAGTAGACCCATTAACGTTAGCATTATCATGAGGATAT---GTGGAGGTCTGCCT-TT 202
consensus_8864#2 CCCACTCCAACCATTAATGATGAGATTGTCGTGAAGATGT---GTGGTGGTCTGCCT-TT 413
consensus_8864#0 CCCACTCCAACCATTAATGATGAGATTGTCGTGAAGATGT---GTGGTGGTCTGCCT-TT 1192
consensus_8864#3 GGNAC-GGAACGGAGGATGGANAAACCNCCCCGCACCCCCCCCNCCGTGTTTTGTTTGTT 229
* * * * * * * * * * * ** * **
consensus_8864#1 GGCAATTGTAGTAGTAGCAGGGCTGATTGCTAGTAAAATGAAATCAAAGATTGACCTGAC 290
consensus_8864#4 GGCCATTGTAGTAGTAGCAGGGCTGATTGCTAGTAAACTGAAATCGAAGATTGACCTGAC 262
consensus_8864#2 GGCCATAATAGTAGTGTCAGGGCTCATTGCTAGTGAA----------------------- 450
consensus_8864#0 GGCCATAATAGTAGTGTCAGGGCTCATTGCTAGTGAACTGAAATCAAAGATTGGAAAGCC 1252
consensus_8864#3 TGTGTTTTTNGGTNTNGGNGGNNNNNNNNNGGGNNAGGGGGGAGAAAAAA---------- 279
* * * * * ** * *
consensus_8864#1 ATTGGATCAGCATTTGGTTGATGTAGATGAGGCTTTAAGTGCAGAGTTGGGAAGCAATCT 350
consensus_8864#4 ATTGGATCAGCATTTGGTTGATGTAGATGAGGCTTTAAGTGCAGAGTTGGGAAACAATCT 322
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 ATTGGATCAGAAATTGATTGAGGTGGAGAAGGCTTTAAGGGCAGAGTTGGGAAACAATCT 1312
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 CACCACCGAAGGAGTAACGCAAATAATTAACCACTGTTACAAAAATCTGCCACCTGATCT 410
consensus_8864#4 TACCAC---AGAAGTAGTGCAGATAATTAACCACTGCTACAAAAATCTGCCACCTGATCT 379
consensus_8864#2 ---CAC---AGAAGTAGTGCAGATAATTAACCACTGCTACAAAAATCTGCCACCTGACCT 504
consensus_8864#0 CACCAC---AGAAGTAGTGCAGATAATTAACCACTGCTACAAAAATCTGCCACCTGACCT 1369
consensus_8864#3 ----ACGAAAAANNNAAAAAGGAAANNANANNANNNNNNNNCCCCCCCCCCCCCCCCGGG 335
** * * * * * * * ** **
consensus_8864#1 TAAGACATGCTTGCTGTACTTGAGCACATTTCCCAAGGGCCGCAGTATTAGCAGGAAGCA 470
consensus_8864#4 TAAGACATGTTTGCTCTACTTGAGTACATTTCCGAAGGGCCGCAATATTAGCAGGAAACG 439
consensus_8864#2 TAAGACATGTTTGCTCTACTTGAGTACATTTCCAAAGGGCCGCAATATTAGCAGGAAACG 564
consensus_8864#0 TAAGACATGTTTGCTCTACTTGAGTACATTTCCAAAGGGCCGCAATATTAGCAGGAAACG 1429
consensus_8864#3 GGGGGGGGCCCCCCCCCCCTTGAAAAAAATTT------GCCAAAAAAAAGAAAGGGTTCT 389
* * ***** * * ** *** * * *** *
consensus_8864#1 TTTGATAAG--AAGATGGATTGCTGAAGGATTCATTACTGAAGAGCATGGGAAGACTGCT 528
consensus_8864#4 TTTGATAAG--AAGATGGATTGCTGAAGGATTTGTTACTGAGAAACATGGGCAGACGGCA 497
consensus_8864#2 ATTGATAAG--AAGATGGGTTGCTGAAGGGTTCGTTACTGAGAAACATGGGCAGACGGCA 622
consensus_8864#0 ATTGATAAG--AAGATGGGTTGCTGAAGGGTTCGTTACTGAGAAACATGGGCAGACGGCA 1487
consensus_8864#3 CTTCAAGATCCAAAAGGGACTGGGCCAAAGCCAAAGATTCGAAAAGGCTGNTATTCCTCC 449
** * * ** * ** ** * * * * * * * *
consensus_8864#1 GAGG---AAGTTGCAGAAGACAGCCTCAATGAACTCATTGGCAGGAACTTGATAAAGCCT 585
consensus_8864#4 GAGG---AAGTTGCAGAAGACAACTTCAATGAACTCATTGGCAGGAACTTGATTCGGCCT 554
consensus_8864#2 GAGG---AAGTTGCAGAAGACAACTTCAATGAGCTCATTGGCAGGAACTTGATTCGGCCT 679
consensus_8864#0 GAGG---AAGTTGCAGAAGACAACTTCAATGAGCTCATTGGCAGGAACTTGATTCGGCCT 1544
consensus_8864#3 AACATTAGTGTGGTGATAGATGAGTACAACGAA-TTATCAA-AAGAACAATAGATTACCT 507
* ** * *** *** ** * ** * **** * ***
consensus_8864#1 ATCAAATACAGCAGCAACGGCAGGGTGAAGAGCTGCCAAATTCATGACATGGTCCTCCAG 645
consensus_8864#4 ATCAACAACAGCAGCAATGGGAAGGT---------------------------------- 580
consensus_8864#2 ATCAACAACAGCAGCAATGGGAAGGTGAAGAGCTGTCAAATTCATGACATGGTCCTTGAG 739
consensus_8864#0 ATCAACAACAGCAGCAATGGGAAGGTGAAGAGCTGTCAAATTCATGACATGGTCCTTGAG 1604
consensus_8864#3 AGTCATAATCTCCACAGTTGGAGGG-----AACTAGTGTGTTATCGATGTG----TTGTA 558
* * * * ** * * **
consensus_8864#1 TACATTGTCTCCAAGTCTAGTGATGAGAATTTCATCGCCGTTATTGGCGGCCACTGGCAG 705
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 TACATTGTCTCCAAATCTGGTGATGAGAATTTCATCACTGTAATTGGTAGCCACTGGCAG 799
consensus_8864#0 TACATTGTCTCCAAATCTGGTGATGAGAATTTCATCACTGTAATTGGTAGCCACTGGCAG 1664
consensus_8864#3 CACACCTACTCCATCTGTAGTCTTTTTTGTTTTATGATT----TTGTGATCTATTTACAA 614
consensus_8864#1 ACACCACTTCCAAGCTACAAGGTACGGCGATTGTCTGTCCATAAAAGTGATAAGCAAGAA 765
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ACACCGTTTCCAAGCTACAAGGTGCGGCGGTTGTCTGTCCATAAAAGTGATAGGCAAGAA 859
consensus_8864#0 ACACCGTTTCCAAGCTACAAGGTGCGGCGGTTGTCTGTCCATAAAAGTGATAGGCAAGAA 1724
consensus_8864#3 ATTTCTGTAAAAAAAAAAAAAA-------------------------------------- 636
consensus_8864#1 ACAGACATGGTAGAGAGGATGAAATTGTCCCATGTCCGATCCTTGACAGTATTGGAGAGT 825
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ACTGATCTAGTAGAGAGGATGAAGTTGTCGCATGTCCGATCTTTGACTGTGTTGGAGAGT 919
consensus_8864#0 ACTGATCTAGTAGAGAGGATGAAGTTGTCGCATGTCCGATCTTTGACTGTGTTGGAGAGT 1784
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 TTCAGTGCTCTTCATTCTACTATGCTCAAGTTCCAGATACTGCAGGTATTGGACCTTGAT 885
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 TTCAAAGCTCTTCATTCTACTATGCTCAAATTCCAGATACTGCAGGTGTTGGATCTTGAA 979
consensus_8864#0 TTCAAAGCTCTTCATTCTACTATGCTCAAATTCCAGATACTGCAGGTGTTGGATCTTGAA 1844
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 GGCTGCAAGGACTTGTCCCACCCACATCAGCTCAAGAAAATATGCAACATGTATCAGTTG 945
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 GGATGCAAGGACTTGTCGT---CAAACCAGCTCAAGAAAATATGTAATATGCATCAGATG 1036
consensus_8864#0 GGATGCAAGGACTTGTCGT---CAAACCAGCTCAAGAAAATATGTAATATGCATCAGATG 1901
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 AAGTACCTGGGCTTGCGGCGGACAGATATTGACAAGATCCCGAAGAATATAGGGAGGCTG 1005
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 AAGTACCTAAGCTTGCGTGGGACGGACATATACAAGATACCGAAGAAAATAGGCAGGCTG 1096
consensus_8864#0 AAGTACCTAAGCTTGCGTGGGACGGACATATACAAGATACCGAAGAAAATAGGCAGGCTG 1961
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 GAGTACTTGGAGGTACTGGACATTAGGGAGACAAATGTCAGAAAGTTGCCTACATCATTT 1065
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 GAGTATTTGGAGGTACTTGACATAAGGGACACGGATGTCACAAACTTGCCTGCATCAGTG 1156
consensus_8864#0 GAGTATTTGGAGGTACTTGACATAAGGGACACGGATGTCACAAACTTGCCTGCATCAGTG 2021
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 GCAAAGCTTCAGCGAATGACCCATCTACTTGCTGGCAACAAAAGCAAGCGGACAGCATTG 1125
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 GAGAGGCTTCAACGAATGGTCCATCTATTGGCTGGCAATAAAACCAAGCGGAGAGCATTG 1216
consensus_8864#0 GAGAGGCTTCAACGAATGGTCCATCTATTGGCTGGCAATAAAACCAAGCGGAGAGCATTG 2081
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 AAATTAACTGAGGAAATTACAAAGGTCGTAGCTCTACAAACACTTTCCGGGATTGAGATC 1185
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 AGATTAACTGAAGGAATCACAAAGATGAAAACTATACAGACACTGTCTGGGATTGAGATC 1276
consensus_8864#0 AGATTAACTGAAGGAATCACAAAGATGAAAACTATACAGACACTGTCTGGGATTGAGATC 2141
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 AGTGGAAGCTCAACTTTAGAAGAAGACCGGGAGCAGCCACGAGATAT---GCCCATCAGA 1242
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 TCTGGAAGGTCAACCAGGACAGCAGCTGGGGAGCAGGCACCAGTTCTTGAAGTCATCAGA 1336
consensus_8864#0 TCTGGAAGGTCAACCAGGACAGCAGCTGGGGAGCAGGCACCAGTTCTTGAAGTCATCAGA 2201
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 CACTCTACAACCACCAGAGCCGAGGAGAGAGGCAACACTGCCTTGCATGGTCCACATAAA 1302
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 AATGCTACAACCACCGATGCCAAGGATGGAGATATCGCGGGCTTGCAAGGTACCCGTAAG 1396
consensus_8864#0 AATGCTACAACCACCGATGCCAAGGATGGAGATATCGCGGGCTTGCAAGGTACCCGTAAG 2261
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 GAAGCTAGCAAAGTGGACCTTCCAAAACAGCTGCGTCCTCTTGAAGCCTTGGAGAAGCTC 1362
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 GAAGGCAGCAAGGTGGATATGCCAAAACAATTGCGTCCGCTAGCAGCCTTGGAGAAGCTC 1456
consensus_8864#0 GAAGGCAGCAAGGTGGATATGCCAAAACAATTGCGTCCGCTAGCAGCCTTGGAGAAGCTC 2321
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ACCAACCTTAAGAAACTTGCCATTTACAAGCTTGTAAAGTTCCAAGCGAAAGACGATGAG 1422
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ACCAACCTTAAGAAACTTGCCATTTACAGGCTTGTTAATTTCCAAGCGAAAGATGATGAA 1516
consensus_8864#0 ACCAACCTTAAGAAACTTGCCATTTACAGGCTTGTTAATTTCCAAGCGAAAGATGATGAA 2381
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 TTACTGCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCCCTCAAGTTTCTTGCAATTGAT 1482
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 TTGTTGCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCTCTCAAGTTTCTTGCAATTGAT 1576
consensus_8864#0 TTGTTGCTCTCTGCTATTGAGCATTTGAGCAGTTGTTCTCTCAAGTTTCTTGCAATTGAT 2441
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 GACAGTTTCACAGGTTTCCTTGAAAGCTCACTGAGTTCTTCGCAAGCAGCACCAGAACAC 1542
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 GACAGTTTCACAGGCTTTCTTGACAGATCACTGAGTTCTTCACAAGCACAACCAGAACAC 1636
consensus_8864#0 GACAGTTTCACAGGCTTTCTTGACAGATCACTGAGTTCTTCACAAGCACAACCAGAACAC 2501
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 CTGTACACCCTCGAGCTTTCTGGCAG-TTATCTAAAGCGCCTGGATGGATTGACCGCCTG 1601
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 CTTTACACCCTTGAGCTTTCTGGCAGCTTGTTTAAAGTGCCAGAATGGATTGACCGCTTG 1696
consensus_8864#0 CTTTACACCCTTGAGCTTTCTGGCAGCTTGTTTAAAGTGCCAGAATGGATTGACCGCTTG 2561
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 CACAACCTTGAGAAGCTTACTCTGTCATTGACTTCACTTAAGACAGATACTTTGGTGGTT 1661
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 CACAACCTTGAGAAGCTTACTCTGTCCATGACTTCACTTACGACAGATACTTTGGTGACT 1756
consensus_8864#0 CACAACCTTGAGAAGCTTACTCTGTCCATGACTTCACTTACGACAGATACTTTGGTGACT 2621
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 CTGAGTAGCCTGCCTGAGTTATTCTCTCTCACTTTTTCACTCCATGCAGCAGACAATGAT 1721
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 CTTAGTAGGCTTCCTGAGCTTTTCTCTCTCATTTTTTCACTTGATGCAGCAAATGGTATT 1816
consensus_8864#0 CTTAGTAGGCTTCCTGAGCTTTTCTCTCTCATTTTTTCACTTGATGCAGCAAATGGTATT 2681
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 TCAAATGCTCTCAAAATAATACATAGGAATACAATGAAGTCAGGAGGTAAGATCTTTGTG 1781
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 TCAAATATCCTCAAAACTGTGCAGAAGAATACATTGGAGTCAGGTGGTAAAATCTTTGTG 1876
consensus_8864#0 TCAAATATCCTCAAAACTGTGCAGAAGAATACATTGGAGTCAGGTGGTAAAATCTTTGTG 2741
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 CTGGATGAGGGATTTGAAAAGCTGAAGCTACTGCATTTTGCGGCACCTGTGCTACCTTCT 1841
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 CCGGATGGGGGGTTTACAAAGTTGAGGTTGCTCCGTTTTACGGCACCAGTGCTACCACCT 1936
consensus_8864#0 CCGGATGGGGGGTTTACAAAGTTGAGGTTGCTCCGTTTTACGGCACCAGTGCTACCACCT 2801
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 CTGAGCTTTCTAGAAGGAGCTATGCCGGAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATG 1901
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 CTGAGCTTCCTAGAAGGGGCAATGCCAGAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATC 1996
consensus_8864#0 CTGAGCTTCCTAGAAGGGGCAATGCCAGAGCTTCAGAGGCTTGAGCTGAGGTTCAGAATC 2861
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 GTGGACTATATGTATGGTCTGGAAAACCTCTCAAAGCTGGGGAGCCCATGATGGCCTCTT 1961
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ATTGAGTTTGTATACGGCCTGGAAAACCTTTCAAGTCTCCAACAGGTATTTCTGACCTTT 2056
consensus_8864#0 ATTGAGTTTGTATACGGCCTGGAAAACCTTTCAAGTCTCCAACAGGTATTTCTGACCTTT 2921
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 GAAGTCTTGATGAGCCCTGATCCTCGGGCTAGCTGGT-AGCTAAGCCGC---GGCAGTTG 2017
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 AGCAGCCAGGCACCTAGTAAGCCGTGGTCCTCCTGATGAGCCATGGTGCTCGACCTGCCG 2116
consensus_8864#0 AGCAGCCAGGCACCTGAAGATGCGAA------------AGAGAAGGTCT---CTCAGATC 2966
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 AAAGATGAGAGAAGAAAGACGCATCACGCCA--AAACTGTAATTTTACTTCCCCATCTGG 2075
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ATGGTTGGGTGGAGGCCGACGAAGGAAGACGTGAAAAGGGGATCCGACCTCGGAGGAGGA 2176
consensus_8864#0 AAAGGACTGGCAAGCAAGATTCGAAAGGCTG------ATTCCTCCAACATTAGTGTGGTG 3020
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 CTATATAAATCCAAGGCAGAAGCAAAGGGTCGGTTTCCTCCTCGGCATTCTATCAAACAG 2135
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 GGAGGTGCATGCGCGGAGATGTAGCGGCGACGCCGGCGTGGACGGCACAGGGATGCCGCG 2236
consensus_8864#0 ATAGATGAGTACAACGAATTATCAAAAGAACAATAGATTACCTAGTCATGATCTCCACAG 3080
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 TTCGTGGGCAACAAATATTTGTAGCCTTCAGACCATCTGCAACTGCAA-GCTAGGCCCCA 2194
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 CCCGCGCGTGGGCAGGAGGTGGAGAAGGGGGGCGCCGGCGGGGAGGAC-GTGCGCCGTGT 2295
consensus_8864#0 TTGGAGGGAACCAGTGTGTTATCGATGTGTTGTACCTACTCCATCTACAGTCTGTTTTTG 3140
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 ACCTTCGATCTGCAGAAT-GCATCTGGTGATACATGATACTCCCGGAAGAGGCAAGATAG 2253
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 CCCTCCGGTGGCCGGAGC-GGA-------------------------------------- 2316
consensus_8864#0 TTTTATGATTTTCAGATCTATTTACAATTTTTTGTACTGTTTTTTTGTTGAGCTGTGGCA 3200
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 CCTCCACATTCCCCCTCCTCCGGGCACACGGCCGCCGGTCACCGGTCGCCGGTGAGGTAG 2313
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 TCTTTGTTTTGTCTGCTGTACTCCCAAAACTCTGCTAGTGAAAAAAAATATATCTT---- 3256
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 CCGACGCCCGACGCGGACACGGCGGCGGGGAGGCCGGAAGGCCACCGCCGGTGAGAGTGG 2373
consensus_8864#4 ------------------------------------------------------------
consensus_8864#2 ------------------------------------------------------------
consensus_8864#0 ------------------------------------------------------------
consensus_8864#3 ------------------------------------------------------------
consensus_8864#1 TAT 2376
consensus_8864#4 ---
consensus_8864#2 ---
consensus_8864#0 ---
consensus_8864#3 ---
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||