Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8868 cluster # 8868       Sequences # 6       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8868#0 length = 3790 sequences # 3  
consensus_8868#1 length = 716 sequences # 1  
 consensus_8868#2 length = 695 sequences # 1  
consensus_8868#3 length = 338 sequences # 1  
consensusID : consensus_8868#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3790
fasta sequence 
                              [CACTCTCTCAGATCCACCGCCGCTGCCGCCTCCTCCTCCTCGACGCCGCCGTTGCCTCCTCCTCCTCCACCGCCGCTGCCTCTCACTCTCTCAGATCCACCGCCGACGCCGCCTCTCACTCTATCACCCTCTCACATCCACCGCCGCCGCCTCCTCCTCCTCCTCCAAGCCGTCGCCTCCCGACTGCCACCGCCGCCTCCTTCTCCTCGACGCCGCCACCGCCGCCTCGTCCTCCTCGACACCGCCGTCGCCCTCCCGGTTCACCGACCACGGCCTCCTCCTCCCTCGTCGTCCACGAGCCCTCATGGATCCGGCCTCCCCGACCACCGCCGCCGCCTCCCGGTTCAAGATCCGGCCTCCCCGACCGCCAGCGCCTCCTCCACGCCCAAGACCGCCGCCGCCGGCCTCCTCTCGAAGTCCGCCACCGCCGGCTTCCTCTCCGCCAAGTCCTCAAGACAGACGTCGCGGCCGCTTCGCCGACCGCCGCTGCCACGCCGCCGCCTCTCAGATCCTCAAGACCAATGTCAAGCCCGCCCCCACCGGCCTCCTTTCCTCCCAGGTACACTTCCTCTCCCTTGTTTTTTTTATGCATTGTGGATGCAATGGATGCAGTGTATGATTTTTGCATGAATTTTGGATGAATTAGATGTATGGATGCAGTGGATGTTTTTTGCATTGTATAGTTGCATGAATTAGATATTGCTATGCAGTGGATGTTTTTTGCATTGTATTGCTATGCAGTGGATGCAGTGGATGAATTTTGCATGAATTTTAGATGAATTAGATGTATGGATGCATTGGATGGATTTTTTTTGAGTGCTTGACAAGTATAGGTCTAAATTAACAAATACTATTAGCATCTGGCATGTTTTCCAGAGCTAAAATTTGTAGGCAGAATTTGCTACTGGACATCTAAAATCATGTAATTGGCTGGAAGACAACACAGAAACGTGACACTGCGTTGGATTCCACATATAACTTGTGTAAATGGTCGTAGGATACCCGAGGCATTATTTTATTATTTCCAGGCAAAAAGAGGAGAGAGAATTTCGAAATGACGGAAGTGCCCCTGGCATCGCACCATGTAACCCTAACTACGTCCGATTGAACTAGACCCTGTCAGACTCGTTGCTCCCTCCACAAACACTCGAAATCCCCAAATCTAACCTTAGGCGGCGATGGTGGCAGTGGTGGAGATGGTTGGTAGCAATGACAGGCAATCGGTGCTAGAAGCGGCTGGTTGAACTACACCCAATCGGACTCGTCGCTCCCGCCACACACACCGGAAATCCCCATCCAAACCTATCCCAAGGTGGCGGCTGTGGCTTTGGTGGCAGCTGGTGGCTGCGGCGGGCTATCAAGTGGCACTGGAAGCGGCGGCAGCGGTGGTGGAGGTGGTGGTGGTGCATCAAAGATGGATGGCTCGGCTTCATCATTGGTCATGCGTCACCGCACTGGTGAGTTTCCCTTCAGGAATTGTCCATTATGTGTGACACAATTGGAGGCACGAATGTCGAGGACCCTATTGGTGTTTCTTAACGATATTACTAGAAATATAATTCCCAGCAATGGCGCAGAAACTCTCGTGGTATATTATGGTTACCGATTTCATCTGTAAGCGCACGAATATACCATTATAGTATTTCACCCGAGAGTATTCCAAGGGTATCGTATTTATTTAATCCCGTGGGATGATTATAATAGAGAGAGCTATACTAATAATTTATATATTACTTGTAATAATCAAAGTCTAAGAAGGGGTTAAGATAATGAATAGGGTAGAGTGACACACAGCAAGAGAATTGCATACTCTCATAATAAATCATCTAAGCTAAGTGGAACGAAAATAGAAAGAATCTATTCCTATACTTCTAATATACATACACATTATACATACTTCCTAGTTATATGATTATTTAGCTAATACCCTCTTTCCAAATGCCCTCGTGGTGCTTGAGAAGCCACTCCTGATTGCCGAGTTTCTTACGATAATCCGTCATGACCATCCAACTAGGGCTAAATACGGATGAGTACCCTCCCCAGGAAAGTAACTTAGGATTATATACATGCGCGGAGGAATACCCGTACTGAGCTGTCACCATCAGCGGCCCACCTCGACATGTTCGCAGCATATAACCCCAAATAACGATATCCAGCAATCTAAACACCACGCTTAAATTACCAAATACTATCCTAATATCATCGTCATGACATAGAGAAATCGTATACATGATCATTATGCTCACACCATTGCATTTCCCAGATAAGCTAGCATCATAATTAATATAATTTGGATATATAATAAAGTTGGTATTCATATACTCGGAAAGTAATACAATACCAGAGTAGTATAAAGAAGAATATTCTAATATATCAATAGTAAAATCAAAGAAATACTAATCAAGAAAAAAAACATCAAAGCCGGCCGTCCAGCACTTATGTGTTGTCCATAGCCTTTAAACTACGATTTTGTTAAAAATACTACACAGAAATAAGTAGGGGACAAAAATTATAACTATTTTCATCACCTCCTCCTTGTTGTCCCTCTCCGTCCTTCAATGCAGGGTATAGTATTCACTATGCTATCGTAAATACTGCAAGGGTATACATATGGTTGAGTTCAGGTGGCATCAGTGAAAGGCTAATGTAGGCAATGTATATAAAGGGACATACTAACTAATAGAATCATTTGTGAGTGTGCCAATAGTGTATTAAGTGTTAAATGATGCTATAGGCTGATCTTTGGGGTTACGGCTACGTCGATGTGGGACTGATGTTCCAGGGCATTACATAAGAAAGCCTTGGCAATTATAGTCAACTTTATCCGTTAGAGAGACATTCATGTCTATTTTTAATGGTGTTATTGTATTATTCGATTGAAGTGGTATGTTTAGACTATTTATACATAGATGTGGAAATAAGTGGTGAACACCAAGTTAAGCGGTGTAGATGATTTTTAGTGTATTAATAATGTATAATTTATTTTAGTGGTATTAATGTTGTTTTATTAAAAATGCACATAGCTTTTGAAGCAAGAACAATAGAGGAGTTTATATATGACCACGACAAAAAGATTTTTATTTAAATATGAGAGATATTCTTATTCTTATCATATTTAGTAGTATATTCCATCTATTTTACGGTAAATATTTTTCTTTTTTTATTGCTAGATAATTTACATTTCCTTAATTACATTGTATATAGTGATGTATGATTTATTTTATCATTCTTTTTTTTAACAACAAATATTCTCTGGCTTATATCCCATCTTTATAGTGTTTGAAATACAGCCCTACGATATATACTTACGCGAATGCGCGGGCTACCTTGTTGATTTAAAATGAACTCTCTCTTGCTGGTCACTTCGGCAGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAGCACGAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTCTCGAGTGCACAGGCGGACAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAGGTCGGTGGACGAGCTCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATCGGCGGCAACACAAATGGCAAGCTCCATAGCAGCGCTACGTTGAATGAATCCCACCTTGATGTCGAGATTTTACTTCCCATCATACCCTTTGTAATGGACAGTTGGATATGAATGGTACCTCGTACCTCATAGTACCTTGTGAGACCTTTTCAAGGATGGGAAAGATGCTCATAAAATTTGCTTACGTTTATAAAGTGCTGCAGAAGC]

[+] EMBL AK067409             [CACTCTCTCAGATCCACCGCCGCTGCCGCCTCCTCCTCCTCGACGCCGCCGTTGCCTCCTCCTCCTCCACCGCCGCTGCCTCTCACTCTCTCAGATCCACCGCCGACGCCGCCTCTCACTCTATCACCCTCTCACATCCACCGCCGCCGCCTCCTCCTCCTCCTCCAAGCCGTCGCCTCCCGACTGCCACCGCCGCCTCCTTCTCCTCGACGCCGCCACCGCCGCCTCGTCCTCCTCGACACCGCCGTCGCCCTCCCGGTTCACCGACCACGGCCTCCTCCTCCCTCGTCGTCCACGAGCCCTCATGGATCCGGCCTCCCCGACCACCGCCGCCGCCTCCCGGTTCAAGATCCGGCCTCCCCGACCGCCAGCGCCTCCTCCACGCCCAAGACCGCCGCCGCCGGCCTCCTCTCGAAGTCCGCCACCGCCGGCTTCCTCTCCGCCAAGTCCTCAAGACAGACGTCGCGGCCGCTTCGCCGACCGCCGCTGCCACGCCGCCGCCTCTCAGATCCTCAAGACCAATGTCAAGCCCGCCCCCACCGGCCTCCTTTCCTCCCAGGTACACTTCCTCTCCCTTGTTTTTTTTATGCATTGTGGATGCAATGGATGCAGTGTATGATTTTTGCATGAATTTTGGATGAATTAGATGTATGGATGCAGTGGATGTTTTTTGCATTGTATAGTTGCATGAATTAGATATTGCTATGCAGTGGATGTTTTTTGCATTGTATTGCTATGCAGTGGATGCAGTGGATGAATTTTGCATGAATTTTAGATGAATTAGATGTATGGATGCATTGGATGGATTTTTTTTGAGTGCTTGACAAGTATAGGTCTAAATTAACAAATACTATTAGCATCTGGCATGTTTTCCAGAGCTAAAATTTGTAGGCAGAATTTGCTACTGGACATCTAAAATCATGTAATTGGCTGGAAGACAACACAGAAACGTGACACTGCGTTGGATTCCACATATAACTTGTGTAAATGGTCGTAGGATACCCGAGGCATTATTTTATTATTTCCAGGCAAAAAGAGGAGAGAGAATTTCGAAATGACGGAAGTGCCCCTGGCATCGCACCATGTAACCCTAACTACGTCCGATTGAACTAGACCCTGTCAGACTCGTTGCTCCCTCCACAAACACTCGAAATCCCCAAATCTAACCTTAGGCGGCGATGGTGGCAGTGGTGGAGATGGTTGGTAGCAATGACAGGCAATCGGTGCTAGAAGCGGCTGGTTGAACTACACCCAATCGGACTCGTCGCTCCCGCCACACACACCGGAAATCCCCATCCAAACCTATCCCAAGGTGGCGGCTGTGGCTTTGGTGGCAGCTGGTGGCTGCGGCGGGCTATCAAGTGGCACTGGAAGCGGCGGCAGCGGTGGTGGAGGTGGTGGTGGTGCATCAAAGATGGATGGCTCGGCTTCATCATTGGTCATGCGTCACCGCACTGGTGAGTTTCCCTTCAGGAATTGTCCATTATGTGTGACACAATTGGAGGCACGAATGTCGAGGACCCTATTGGTGTTTCTTAACGATATTACTAGAAATATAATTCCCAGCAATGGCGCAGAAACTCTCGTGGTATATTATGGTTACCGATTTCATCTGTAAGCGCACGAATATACCATTATAGTATTTCACCCGAGAGTATTCCAAGGGTATCGTATTTATTTAATCCCGTGGGATGATTATAATAGAGAGAGCTATACTAATAATTTATATATTACTTGTAATAATCAAAGTCTAAGAAGGGGTTAAGATAATGAATAGGGTAGAGTGACACACAGCAAGAGAATTGCATACTCTCATAATAAATCATCTAAGCTAAGTGGAACGAAAATAGAAAGAATCTATTCCTATACTTCTAATATACATACACATTATACATACTTCCTAGTTATATGATTATTTAGCTAATACCCTCTTTCCAAATGCCCTCGTGGTGCTTGAGAAGCCACTCCTGATTGCCGAGTTTCTTACGATAATCCGTCATGACCATCCAACTAGGGCTAAATACGGATGAGTACCCTCCCCAGGAAAGTAACTTAGGATTATATACATGCGCGGAGGAATACCCGTACTGAGCTGTCACCATCAGCGGCCCACCTCGACATGTTCGCAGCATATAACCCCAAATAACGATATCCAGCAATCTAAACACCACGCTTAAATTACCAAATACTATCCTAATATCATCGTCATGACATAGAGAAATCGTATACATGATCATTATGCTCACACCATTGCATTTCCCAGATAAGCTAGCATCATAATTAATATAATTTGGATATATAATAAAGTTGGTATTCATATACTCGGAAAGTAATACAATACCAGAGTAGTATAAAGAAGAATATTCTAATATATCAATAGTAAAATCAAAGAAATACTAATCAAGAAAAAAAACATCAAAGCCGGCCGTCCAGCACTTATGTGTTGTCCATAGCCTTTAAACTACGATTTTGTTAAAAATACTACACAGAAATAAGTAGGGGACAAAAATTATAACTATTTTCATCACCTCCTCCTTGTTGTCCCTCTCCGTCCTTCAATGCAGGGTATAGTATTCACTATGCTATCGTAAATACTGCAAGGGTATACATATGGTTGAGTTCAGGTGGCATCAGTGAAAGGCTAATGTAGGCAATGTATATAAAGGGACATACTAACTAATAGAATCATTTGTGAGTGTGCCAATAGTGTATTAAGTGTTAAATGATGCTATAGGCTGATCTTTGGGGTTACGGCTACGTCGATGTGGGACTGATGTTCCAGGGCATTACATAAGAAAGCCTTGGCAATTATAGTCAACTTTATCCGTTAGAGAGACATTCATGTCTATTTTTAATGGTGTTATTGTATTATTCGATTGAAGTGGTATGTTTAGACTATTTATACATAGATGTGGAAATAAGTGGTGAACACCAAGTTAAGCGGTGTAGATGATTTTTAGTGTATTAATAATGTATAATTTATTTTAGTGGTATTAATGTTGTTTTATTAAAAATGCACATAGCTTTTGAAGCAAGAACAATAGAGGAGTTTATATATGACCACGACAAAAAGATTTTTATTTAAATATGAGAGATATTCTTATTCTTATCATATTTAGTAGTATATTCCATCTATTTTACGGTAAATATTTTTCTTTTTTTATTGCTAGATAATTTACATTTCCTTAATTACATTGTATATAGTGATGTATGATTTATTTTATCATTCTTTTTTTTAACAACAAATATTCTCTGGCTTATATCCCATCTTTATAGTGTTTGAAATACAGCCCTACGATATATACTTACGCGAATGCGCGGGCTACCTTGTTGATTTAAAATGAACTCTCTCTTGCTGGTCACTTCGGCAGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAGCACGAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTCTCGAGTGCACAGGCGGACAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAGGTCGGTGGACGAGCTCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATCGGCGGCAACACAAATGGCAAGCTCCATAGCAGCGCTACGTTGAATGAATCCCACCTTGATGTCGAGATTTTACTTCCCATCATACCCTTTGTAATGGACAGTTGGATATGAATGGTACCTCGTACCTCATAGTACCTTGTGAGACCTTTTCAAGGATGGGAAAGATGCTCATAAAATT                             ]
[+] EMBL CB648803             [                                               GCCGTTCCCTCCTCCTCCTCCACCGCCGCTGCCTCTCACTCTCTCAGATCCACCGCCGACGCCGCCTCTCACTCTATCACCCTCTCACATCCACCGCCGCCGCCTCCTCCTCCTCCTCCAAGCCGTCGCCTCCCGACTGCCACCGCCGCCTCCTTCTCCTCGACGCCGCCACCGCCGCCTCGTCCTCCTCGACACCGCCGTCGCCCTCCCGGTTCACCGACCACGGCCTCCTCCTCCCTCGTCGTCCACGAGCCCTCATGGATCCGGCCTCCCCGACCACCGCCGCCGCCTCCCGGTTCAAGATCCGGCCTCCCCGACCGCCAGCGCCTCCTCCACGCCCAAGACCGCCGCCGCCGGCCTCCTCTCGAAGTCCGCCACCGCCGGCTTCCTCTCCGCCAAGTCCTCAAGACAGACGTCGCGGCCGCTTCGCCGACCGCCGCTGCCACGCCGCCGCCTCTCAGATCCTCAAGACCAATGTCAAGCCCGCCCCCACCGGCCTCCTTTCCTCCCAGGTACACTTCCTCTCCCTTGTTTTTTTTATGCATTGTGGATGCAATGGATGCAGTGTATGATTTTTGCATGAATTTTGGATGAATTAGATGTATGGATGCAGTGGATGTTTTTTGCATTGTATAGTTGCATGAATTAGATATTGCTATGCAGTGGATGTTTTTTGCATTGTATTGCTATGCAGTGGATGCAGTGGATGAATTTTGCATGAATTTTAGATGAATTAGATGTATGGATGCATTGGATGGATTTTTTTTGAGTGCTTGACAAGTATAGGTCTAAATTAACAAATACTATTAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK061934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGGAAATAAGTGGTGAACACCAAGTTAAGCGGTGTAGATGATTTTTAGTGTATTAATAATGTATAATTTATTTTAGTGGTATTAATGTTGTTTTATTAAAAATGCACATAGCTTTTGAAGCAAGAACAATAGAGGAGTTTATATATGACCACGACAAAAAGATTTTTATTTAAATATGAGAGATATTCTTATTCCTATCATATTTAGTAGTATATTCCATCTATTTTGCGGTAAATATTTTTCTTTTTTTATTGCTAGATAATTTACATTTCCTTAATTACATTGTATATAGTGATGTATGATTTATTTTATCATTCTTTTTTTTAACAACAAATATTCTCTGGCTTATATCCCATCTTTATAGTGTTTGAAATACAGCCCTACGATATATACTTACGCGAATGCGCGGGCTACCTTGTTGATTTAAAATGAACTCTCTCTTGCTGGTCACTTCGGCAGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAGCACGAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTCTCGAGTGCACAGGCGGACAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAGGTCGGTGGACGAGCTCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATCGGCGGCAACACAAATGGCAAGCTCCATAGCAGCGCTACGTTGAATGAATCCCACCTTGATGTCGAGATTTTACTTCCCATCATACCCTTTGTAATGGACAGTTGGATATGAATGGTACCTCGTACCTCATAGTACCTTGTGAGACCTTTTCAAGGATGGGAAAGATGCTCATAAAATTTGCTTACGTTTATAAAGTGCTGCAGAAGC]




>consensus_8868#0
CACTCTCTCAGATCCACCGCCGCTGCCGCCTCCTCCTCCTCGACGCCGCCGTTGCCTCCT
CCTCCTCCACCGCCGCTGCCTCTCACTCTCTCAGATCCACCGCCGACGCCGCCTCTCACT
CTATCACCCTCTCACATCCACCGCCGCCGCCTCCTCCTCCTCCTCCAAGCCGTCGCCTCC
CGACTGCCACCGCCGCCTCCTTCTCCTCGACGCCGCCACCGCCGCCTCGTCCTCCTCGAC
ACCGCCGTCGCCCTCCCGGTTCACCGACCACGGCCTCCTCCTCCCTCGTCGTCCACGAGC
CCTCATGGATCCGGCCTCCCCGACCACCGCCGCCGCCTCCCGGTTCAAGATCCGGCCTCC
CCGACCGCCAGCGCCTCCTCCACGCCCAAGACCGCCGCCGCCGGCCTCCTCTCGAAGTCC
GCCACCGCCGGCTTCCTCTCCGCCAAGTCCTCAAGACAGACGTCGCGGCCGCTTCGCCGA
CCGCCGCTGCCACGCCGCCGCCTCTCAGATCCTCAAGACCAATGTCAAGCCCGCCCCCAC
CGGCCTCCTTTCCTCCCAGGTACACTTCCTCTCCCTTGTTTTTTTTATGCATTGTGGATG
CAATGGATGCAGTGTATGATTTTTGCATGAATTTTGGATGAATTAGATGTATGGATGCAG
TGGATGTTTTTTGCATTGTATAGTTGCATGAATTAGATATTGCTATGCAGTGGATGTTTT
TTGCATTGTATTGCTATGCAGTGGATGCAGTGGATGAATTTTGCATGAATTTTAGATGAA
TTAGATGTATGGATGCATTGGATGGATTTTTTTTGAGTGCTTGACAAGTATAGGTCTAAA
TTAACAAATACTATTAGCATCTGGCATGTTTTCCAGAGCTAAAATTTGTAGGCAGAATTT
GCTACTGGACATCTAAAATCATGTAATTGGCTGGAAGACAACACAGAAACGTGACACTGC
GTTGGATTCCACATATAACTTGTGTAAATGGTCGTAGGATACCCGAGGCATTATTTTATT
ATTTCCAGGCAAAAAGAGGAGAGAGAATTTCGAAATGACGGAAGTGCCCCTGGCATCGCA
CCATGTAACCCTAACTACGTCCGATTGAACTAGACCCTGTCAGACTCGTTGCTCCCTCCA
CAAACACTCGAAATCCCCAAATCTAACCTTAGGCGGCGATGGTGGCAGTGGTGGAGATGG
TTGGTAGCAATGACAGGCAATCGGTGCTAGAAGCGGCTGGTTGAACTACACCCAATCGGA
CTCGTCGCTCCCGCCACACACACCGGAAATCCCCATCCAAACCTATCCCAAGGTGGCGGC
TGTGGCTTTGGTGGCAGCTGGTGGCTGCGGCGGGCTATCAAGTGGCACTGGAAGCGGCGG
CAGCGGTGGTGGAGGTGGTGGTGGTGCATCAAAGATGGATGGCTCGGCTTCATCATTGGT
CATGCGTCACCGCACTGGTGAGTTTCCCTTCAGGAATTGTCCATTATGTGTGACACAATT
GGAGGCACGAATGTCGAGGACCCTATTGGTGTTTCTTAACGATATTACTAGAAATATAAT
TCCCAGCAATGGCGCAGAAACTCTCGTGGTATATTATGGTTACCGATTTCATCTGTAAGC
GCACGAATATACCATTATAGTATTTCACCCGAGAGTATTCCAAGGGTATCGTATTTATTT
AATCCCGTGGGATGATTATAATAGAGAGAGCTATACTAATAATTTATATATTACTTGTAA
TAATCAAAGTCTAAGAAGGGGTTAAGATAATGAATAGGGTAGAGTGACACACAGCAAGAG
AATTGCATACTCTCATAATAAATCATCTAAGCTAAGTGGAACGAAAATAGAAAGAATCTA
TTCCTATACTTCTAATATACATACACATTATACATACTTCCTAGTTATATGATTATTTAG
CTAATACCCTCTTTCCAAATGCCCTCGTGGTGCTTGAGAAGCCACTCCTGATTGCCGAGT
TTCTTACGATAATCCGTCATGACCATCCAACTAGGGCTAAATACGGATGAGTACCCTCCC
CAGGAAAGTAACTTAGGATTATATACATGCGCGGAGGAATACCCGTACTGAGCTGTCACC
ATCAGCGGCCCACCTCGACATGTTCGCAGCATATAACCCCAAATAACGATATCCAGCAAT
CTAAACACCACGCTTAAATTACCAAATACTATCCTAATATCATCGTCATGACATAGAGAA
ATCGTATACATGATCATTATGCTCACACCATTGCATTTCCCAGATAAGCTAGCATCATAA
TTAATATAATTTGGATATATAATAAAGTTGGTATTCATATACTCGGAAAGTAATACAATA
CCAGAGTAGTATAAAGAAGAATATTCTAATATATCAATAGTAAAATCAAAGAAATACTAA
TCAAGAAAAAAAACATCAAAGCCGGCCGTCCAGCACTTATGTGTTGTCCATAGCCTTTAA
ACTACGATTTTGTTAAAAATACTACACAGAAATAAGTAGGGGACAAAAATTATAACTATT
TTCATCACCTCCTCCTTGTTGTCCCTCTCCGTCCTTCAATGCAGGGTATAGTATTCACTA
TGCTATCGTAAATACTGCAAGGGTATACATATGGTTGAGTTCAGGTGGCATCAGTGAAAG
GCTAATGTAGGCAATGTATATAAAGGGACATACTAACTAATAGAATCATTTGTGAGTGTG
CCAATAGTGTATTAAGTGTTAAATGATGCTATAGGCTGATCTTTGGGGTTACGGCTACGT
CGATGTGGGACTGATGTTCCAGGGCATTACATAAGAAAGCCTTGGCAATTATAGTCAACT
TTATCCGTTAGAGAGACATTCATGTCTATTTTTAATGGTGTTATTGTATTATTCGATTGA
AGTGGTATGTTTAGACTATTTATACATAGATGTGGAAATAAGTGGTGAACACCAAGTTAA
GCGGTGTAGATGATTTTTAGTGTATTAATAATGTATAATTTATTTTAGTGGTATTAATGT
TGTTTTATTAAAAATGCACATAGCTTTTGAAGCAAGAACAATAGAGGAGTTTATATATGA
CCACGACAAAAAGATTTTTATTTAAATATGAGAGATATTCTTATTCTTATCATATTTAGT
AGTATATTCCATCTATTTTACGGTAAATATTTTTCTTTTTTTATTGCTAGATAATTTACA
TTTCCTTAATTACATTGTATATAGTGATGTATGATTTATTTTATCATTCTTTTTTTTAAC
AACAAATATTCTCTGGCTTATATCCCATCTTTATAGTGTTTGAAATACAGCCCTACGATA
TATACTTACGCGAATGCGCGGGCTACCTTGTTGATTTAAAATGAACTCTCTCTTGCTGGT
CACTTCGGCAGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAGCAC
GAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTCTCGAGTGCACAGGCGGA
CAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAGGTCGGTGGACGAGCTCA
ACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATCGGCGGCAACACAAATGG
CAAGCTCCATAGCAGCGCTACGTTGAATGAATCCCACCTTGATGTCGAGATTTTACTTCC
CATCATACCCTTTGTAATGGACAGTTGGATATGAATGGTACCTCGTACCTCATAGTACCT
TGTGAGACCTTTTCAAGGATGGGAAAGATGCTCATAAAATTTGCTTACGTTTATAAAGTG
CTGCAGAAGC

consensusID : consensus_8868#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 716
fasta sequence 
                              [GCCTCCACTCNATACCCTCTCACATCCACCGCACGCCGCCTCCTCCTCCTCCTCCAAGCCGTCGCCTCCCGACTGCCACCGCCGCCTCCTTCTCCTCGACGCCGCCACCGCCGCCTCGTCCTCCTCGACACCGCCGTCGCCCTCCCGGTTCACCGACCACGGCCTCCTCCTCCCTCGTCGTCCACGAGCCCTCATGGATCCGGCCTCCCCGACCACCGCCGCCGCCTCCCGGTTCAAGATCCGGCCTCCCCGACCGCCAGCGCCTCCTCCACGCCCAAGACCGCCGCCGCCGGCCTCCTCTCGAAGTCCGCCACCGCCGGCTTCCTCTCCGCCAAGTCCTCAAGACAGACGTCGCGGCCGCTTCGCCGACCGCCGCTGCCACGCCGCCGCCTCTCAGATCCTCAAGACCAATGTCAAGCCCGCCCCCACCGGCCTCCTTTCCTCCCAGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAGCACGAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTCTCGAGTGCACAGGCGGACAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAGGTCGGTGGACGAGCTCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATCGGCGGCAACACAAATGGCAAGCTCCATAGCAGCGCTACGTTGAATGAATCCCACCT]

[+] EMBL CB646190             [GCCTCCACTCNATACCCTCTCACATCCACCGCACGCCGCCTCCTCCTCCTCCTCCAAGCCGTCGCCTCCCGACTGCCACCGCCGCCTCCTTCTCCTCGACGCCGCCACCGCCGCCTCGTCCTCCTCGACACCGCCGTCGCCCTCCCGGTTCACCGACCACGGCCTCCTCCTCCCTCGTCGTCCACGAGCCCTCATGGATCCGGCCTCCCCGACCACCGCCGCCGCCTCCCGGTTCAAGATCCGGCCTCCCCGACCGCCAGCGCCTCCTCCACGCCCAAGACCGCCGCCGCCGGCCTCCTCTCGAAGTCCGCCACCGCCGGCTTCCTCTCCGCCAAGTCCTCAAGACAGACGTCGCGGCCGCTTCGCCGACCGCCGCTGCCACGCCGCCGCCTCTCAGATCCTCAAGACCAATGTCAAGCCCGCCCCCACCGGCCTCCTTTCCTCCCAGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAGCACGAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTCTCGAGTGCACAGGCGGACAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAGGTCGGTGGACGAGCTCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATCGGCGGCAACACAAATGGCAAGCTCCATAGCAGCGCTACGTTGAATGAATCCCACCT]




>consensus_8868#1
GCCTCCACTCNATACCCTCTCACATCCACCGCACGCCGCCTCCTCCTCCTCCTCCAAGCC
GTCGCCTCCCGACTGCCACCGCCGCCTCCTTCTCCTCGACGCCGCCACCGCCGCCTCGTC
CTCCTCGACACCGCCGTCGCCCTCCCGGTTCACCGACCACGGCCTCCTCCTCCCTCGTCG
TCCACGAGCCCTCATGGATCCGGCCTCCCCGACCACCGCCGCCGCCTCCCGGTTCAAGAT
CCGGCCTCCCCGACCGCCAGCGCCTCCTCCACGCCCAAGACCGCCGCCGCCGGCCTCCTC
TCGAAGTCCGCCACCGCCGGCTTCCTCTCCGCCAAGTCCTCAAGACAGACGTCGCGGCCG
CTTCGCCGACCGCCGCTGCCACGCCGCCGCCTCTCAGATCCTCAAGACCAATGTCAAGCC
CGCCCCCACCGGCCTCCTTTCCTCCCAGTGGCCAGGTTAAATTCATTGGCCAAGCTATTA
TGGAATCAAGACAGCACGAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTC
TCGAGTGCACAGGCGGACAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAG
GTCGGTGGACGAGCTCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATC
GGCGGCAACACAAATGGCAAGCTCCATAGCAGCGCTACGTTGAATGAATCCCACCT

consensusID : consensus_8868#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 695
fasta sequence 
                              [TAGCAATGACAGGCAATCGGTGCTAGAAGCGGCTGGTTGAACTACACCCAATCGGACTCGTCGCTCCCGCCACACACACCGGAAATCCCCATCCAAACCTATCCCAAGGTGGCGGCTGTGGCTTTGGTGGCAGCTGGTGGATGCGGCGGGCTATCAAGTGGCACTGGAAGCGGCGGCAGCGGTGGTGTTGGTGGTGTTGGTGCATCAAAGATGGATGGCTCGGCTTCATCATTGGTCATGCGTCACCGCTCTGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAGCCCGAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTCTAGAGTGCACAGGCGGACAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAGGTCGGTGGACGAGCTCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATTGGCGGCAACACAAATGGCAAGCTCCATATCAGCGATACGTTGAATGAATCCCCCCTTGATGTGGAGATTTTACTTCCCATCATACCCTTTGTAATGGACAGTTGGATATGAATGGTACCTCGTACCTCATAGTCCCTTGTGAGTCCTTTTCAAGGATGGGAAAGATGCTCATAAAATTTGATGGGGTTTATAAAGTGCTCCTGAAGCTTAAATGGTCAAAAAAGGGGAAA]

[-] EMBL CB648804             [TAGCAATGACAGGCAATCGGTGCTAGAAGCGGCTGGTTGAACTACACCCAATCGGACTCGTCGCTCCCGCCACACACACCGGAAATCCCCATCCAAACCTATCCCAAGGTGGCGGCTGTGGCTTTGGTGGCAGCTGGTGGATGCGGCGGGCTATCAAGTGGCACTGGAAGCGGCGGCAGCGGTGGTGTTGGTGGTGTTGGTGCATCAAAGATGGATGGCTCGGCTTCATCATTGGTCATGCGTCACCGCTCTGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAGCCCGAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTCTAGAGTGCACAGGCGGACAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAGGTCGGTGGACGAGCTCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATTGGCGGCAACACAAATGGCAAGCTCCATATCAGCGATACGTTGAATGAATCCCCCCTTGATGTGGAGATTTTACTTCCCATCATACCCTTTGTAATGGACAGTTGGATATGAATGGTACCTCGTACCTCATAGTCCCTTGTGAGTCCTTTTCAAGGATGGGAAAGATGCTCATAAAATTTGATGGGGTTTATAAAGTGCTCCTGAAGCTTAAATGGTCAAAAAAGGGGAAA]




>consensus_8868#2
TAGCAATGACAGGCAATCGGTGCTAGAAGCGGCTGGTTGAACTACACCCAATCGGACTCG
TCGCTCCCGCCACACACACCGGAAATCCCCATCCAAACCTATCCCAAGGTGGCGGCTGTG
GCTTTGGTGGCAGCTGGTGGATGCGGCGGGCTATCAAGTGGCACTGGAAGCGGCGGCAGC
GGTGGTGTTGGTGGTGTTGGTGCATCAAAGATGGATGGCTCGGCTTCATCATTGGTCATG
CGTCACCGCTCTGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAGC
CCGAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTCTAGAGTGCACAGGCG
GACAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAGGTCGGTGGACGAGCT
CAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATTGGCGGCAACACAAAT
GGCAAGCTCCATATCAGCGATACGTTGAATGAATCCCCCCTTGATGTGGAGATTTTACTT
CCCATCATACCCTTTGTAATGGACAGTTGGATATGAATGGTACCTCGTACCTCATAGTCC
CTTGTGAGTCCTTTTCAAGGATGGGAAAGATGCTCATAAAATTTGATGGGGTTTATAAAG
TGCTCCTGAAGCTTAAATGGTCAAAAAAGGGGAAA

consensusID : consensus_8868#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 338
fasta sequence 
                              [NGCCCCCACCGGCNTCCTTTCCTCCNAGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAGCTCGATAGGTCGGTGGACGAGCTCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATCGGCGGCAANACAAATGGCAAGCTCCATAGCAGCGCTACGTTGAATGAATCCCACCTTGATGTCGAGATTTTACTTCCCATCATACCCTTTGTAATGGACAGTTGGATATGAATGGTACCTCGTACCTCATAGTACCTTGTGAGACCTTTTCAAGGATGGGAAAGATGCTCATAAAATTTGCTTAAAAAAAAAAAAA]

[+] EMBL AU102055             [NGCCCCCACCGGCNTCCTTTCCTCCNAGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAGCTCGATAGGTCGGTGGACGAGCTCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATCGGCGGCAANACAAATGGCAAGCTCCATAGCAGCGCTACGTTGAATGAATCCCACCTTGATGTCGAGATTTTACTTCCCATCATACCCTTTGTAATGGACAGTTGGATATGAATGGTACCTCGTACCTCATAGTACCTTGTGAGACCTTTTCAAGGATGGGAAAGATGCTCATAAAATTTGCTTAAAAAAAAAAAAA]




>consensus_8868#3
NGCCCCCACCGGCNTCCTTTCCTCCNAGTGGCCAGGTTAAATTCATTGGCCAAGCTATTA
TGGAATCAAGACAGCTCGATAGGTCGGTGGACGAGCTCAACGAATCAGAGCAATCTGGAA
GGAGGCGAGTAGGAATGAGATCGGCGGCAANACAAATGGCAAGCTCCATAGCAGCGCTAC
GTTGAATGAATCCCACCTTGATGTCGAGATTTTACTTCCCATCATACCCTTTGTAATGGA
CAGTTGGATATGAATGGTACCTCGTACCTCATAGTACCTTGTGAGACCTTTTCAAGGATG
GGAAAGATGCTCATAAAATTTGCTTAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CACTCTCTCAGATCCACCGCCGCTGCCGCCTCCTCCTCCTCGACGCCGCCGTTGCCTCCT 60
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CCTCCTCCACCGCCGCTGCCTCTCACTCTCTCAGATCCACCGCCGACGCCGCCTCTCACT 120
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CTATCACCCTCTCACATCCACCGCCGCCGCCTCCTCCTCCTCCTCCAAGCCGTCGCCTCC 180
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CGACTGCCACCGCCGCCTCCTTCTCCTCGACGCCGCCACCGCCGCCTCGTCCTCCTCGAC 240
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      ACCGCCGTCGCCCTCCCGGTTCACCGACCACGGCCTCCTCCTCCCTCGTCGTCCACGAGC 300
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CCTCATGGATCCGGCCTCCCCGACCACCGCCGCCGCCTCCCGGTTCAAGATCCGGCCTCC 360
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CCGACCGCCAGCGCCTCCTCCACGCCCAAGACCGCCGCCGCCGGCCTCCTCTCGAAGTCC 420
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      GCCACCGCCGGCTTCCTCTCCGCCAAGTCCTCAAGACAGACGTCGCGGCCGCTTCGCCGA 480
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CCGCCGCTGCCACGCCGCCGCCTCTCAGATCCTCAAGACCAATGTCAAGCCCGCCCCCAC 540
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CGGCCTCCTTTCCTCCCAGGTACACTTCCTCTCCCTTGTTTTTTTTATGCATTGTGGATG 600
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CAATGGATGCAGTGTATGATTTTTGCATGAATTTTGGATGAATTAGATGTATGGATGCAG 660
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TGGATGTTTTTTGCATTGTATAGTTGCATGAATTAGATATTGCTATGCAGTGGATGTTTT 720
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TTGCATTGTATTGCTATGCAGTGGATGCAGTGGATGAATTTTGCATGAATTTTAGATGAA 780
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TTAGATGTATGGATGCATTGGATGGATTTTTTTTGAGTGCTTGACAAGTATAGGTCTAAA 840
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TTAACAAATACTATTAGCATCTGGCATGTTTTCCAGAGCTAAAATTTGTAGGCAGAATTT 900
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      GCTACTGGACATCTAAAATCATGTAATTGGCTGGAAGACAACACAGAAACGTGACACTGC 960
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      GTTGGATTCCACATATAACTTGTGTAAATGGTCGTAGGATACCCGAGGCATTATTTTATT 1020
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      ATTTCCAGGCAAAAAGAGGAGAGAGAATTTCGAAATGACGGAAGTGCCCCTGGCATCGCA 1080
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CCATGTAACCCTAACTACGTCCGATTGAACTAGACCCTGTCAGACTCGTTGCTCCCTCCA 1140
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CAAACACTCGAAATCCCCAAATCTAACCTTAGGCGGCGATGGTGGCAGTGGTGGAGATGG 1200
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TTGGTAGCAATGACAGGCAATCGGTGCTAGAAGCGGCTGGTTGAACTACACCCAATCGGA 1260
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CTCGTCGCTCCCGCCACACACACCGGAAATCCCCATCCAAACCTATCCCAAGGTGGCGGC 1320
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TGTGGCTTTGGTGGCAGCTGGTGGCTGCGGCGGGCTATCAAGTGGCACTGGAAGCGGCGG 1380
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CAGCGGTGGTGGAGGTGGTGGTGGTGCATCAAAGATGGATGGCTCGGCTTCATCATTGGT 1440
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CATGCGTCACCGCACTGGTGAGTTTCCCTTCAGGAATTGTCCATTATGTGTGACACAATT 1500
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      GGAGGCACGAATGTCGAGGACCCTATTGGTGTTTCTTAACGATATTACTAGAAATATAAT 1560
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TCCCAGCAATGGCGCAGAAACTCTCGTGGTATATTATGGTTACCGATTTCATCTGTAAGC 1620
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      GCACGAATATACCATTATAGTATTTCACCCGAGAGTATTCCAAGGGTATCGTATTTATTT 1680
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      AATCCCGTGGGATGATTATAATAGAGAGAGCTATACTAATAATTTATATATTACTTGTAA 1740
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TAATCAAAGTCTAAGAAGGGGTTAAGATAATGAATAGGGTAGAGTGACACACAGCAAGAG 1800
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      AATTGCATACTCTCATAATAAATCATCTAAGCTAAGTGGAACGAAAATAGAAAGAATCTA 1860
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TTCCTATACTTCTAATATACATACACATTATACATACTTCCTAGTTATATGATTATTTAG 1920
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CTAATACCCTCTTTCCAAATGCCCTCGTGGTGCTTGAGAAGCCACTCCTGATTGCCGAGT 1980
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TTCTTACGATAATCCGTCATGACCATCCAACTAGGGCTAAATACGGATGAGTACCCTCCC 2040
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CAGGAAAGTAACTTAGGATTATATACATGCGCGGAGGAATACCCGTACTGAGCTGTCACC 2100
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      ATCAGCGGCCCACCTCGACATGTTCGCAGCATATAACCCCAAATAACGATATCCAGCAAT 2160
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CTAAACACCACGCTTAAATTACCAAATACTATCCTAATATCATCGTCATGACATAGAGAA 2220
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      ATCGTATACATGATCATTATGCTCACACCATTGCATTTCCCAGATAAGCTAGCATCATAA 2280
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TTAATATAATTTGGATATATAATAAAGTTGGTATTCATATACTCGGAAAGTAATACAATA 2340
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CCAGAGTAGTATAAAGAAGAATATTCTAATATATCAATAGTAAAATCAAAGAAATACTAA 2400
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TCAAGAAAAAAAACATCAAAGCCGGCCGTCCAGCACTTATGTGTTGTCCATAGCCTTTAA 2460
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      ACTACGATTTTGTTAAAAATACTACACAGAAATAAGTAGGGGACAAAAATTATAACTATT 2520
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TTCATCACCTCCTCCTTGTTGTCCCTCTCCGTCCTTCAATGCAGGGTATAGTATTCACTA 2580
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TGCTATCGTAAATACTGCAAGGGTATACATATGGTTGAGTTCAGGTGGCATCAGTGAAAG 2640
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      GCTAATGTAGGCAATGTATATAAAGGGACATACTAACTAATAGAATCATTTGTGAGTGTG 2700
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CCAATAGTGTATTAAGTGTTAAATGATGCTATAGGCTGATCTTTGGGGTTACGGCTACGT 2760
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CGATGTGGGACTGATGTTCCAGGGCATTACATAAGAAAGCCTTGGCAATTATAGTCAACT 2820
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TTATCCGTTAGAGAGACATTCATGTCTATTTTTAATGGTGTTATTGTATTATTCGATTGA 2880
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      AGTGGTATGTTTAGACTATTTATACATAGATGTGGAAATAAGTGGTGAACACCAAGTTAA 2940
consensus_8868#1      -------------------------------------GCCTCCACTCNATACCCTCTCAC 23
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      GCGGTGTAGATGATTTTTAGTGTATTAATAATGTATAATTTATTTTAGTGGTATTAATGT 3000
consensus_8868#1      ATCCACCGCACGCCGCCTCCTCCTCCTCCTCCAAGCCGTCGCCTCCCGACTGCCACCGCC 83
                                                                                  

consensus_8868#2      ------------------------------------------------------------
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      TGTTTTATTAAAAATGCACATAGCTTTTGAAGCAAGAACAATAGAGGAGTTTATATATGA 3060
consensus_8868#1      GCCTCCTTCTCCTCGACGCCGCCACCGCCGCCTCGTCCTCCTCGACACCGCCGTCGCCCT 143
                                                                                  

consensus_8868#2      --------------------------------------------------------TAGC 4
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      CCACGACAAAAAGATTTTTATTTAAATATGAGAGATATTCTTATTCTTATCATATTTAGT 3120
consensus_8868#1      CCCGGTTCACCGACCACGGCCTCCTCCTCCCTCGTCGTCCACGAGCCCTCATGGATCCGG 203
                                                                                  

consensus_8868#2      AATGACAGGCAATCGGTGCTAGAAGCGGCTGGTTGAACTACACCCAATCGGACTCGTCGC 64
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      AGT-ATATTCCATCTATTTTACGGTAAATATTTTTCTTTTTTTATTGCTAGATAATTTAC 3179
consensus_8868#1      CCTCCCCGACCACCGCCGCCGCCTCC--CGGTTCAAGATCCGGCCTCCCCGACCGCCAGC 261
                                                                                  

consensus_8868#2      -TCCCGCCACACACACCGGAAATCCCCATCCA-AACCTATCCC--AAGGTGGCGGCTGTG 120
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      ATTTCCTTAATTACATTGTATATAGTGATGTATGATTTATTTT--ATCATTCTTTTTTTT 3237
consensus_8868#1      GCCTCCTC---CACGCCCAAGACCGCCGCCGCCGGCCTCCTCTCGAAGTCCGCCACCGCC 318
                                                                                  

consensus_8868#2      GCTTTGGTGGCAGCTGGTGGATGCGGCGGGCTATCAAGTGGCACTGGAAGCGGCGGCAGC 180
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      AACAACAAATATTCTCTGGCTTATATCCCATCTTTATAGTGTTTGAAATACAGCCCTACG 3297
consensus_8868#1      GGCTTCCTCTCCGCCAAGTCCTCAAGACAGACGTC--GCGGCCGCTTCGCCGACCGCCGC 376
                                                                                  

consensus_8868#2      GGTGGTGTTGGTGGTGTTGGTGCATCAAAGATGGATGGCTCGGCTTCATCATTGGTCATG 240
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      ATATATACTTACGCGAATGCGCGGGCTACCTTGTTGATTTAAAATGAACTCTCTCTTGCT 3357
consensus_8868#1      TGCCACGCCGCCGCCTCTCAGATCCTCAAGACCAATGTCAAGCCCGCCCCCACCGGCCTC 436
                                                                                  

consensus_8868#2      CGTCACCGCT-CTGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAG 299
consensus_8868#3      ------------------------------------------------------------
consensus_8868#0      GGTCACTTCGGCAGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAG 3417
consensus_8868#1      CTTTCCTCC--CAGTGGCCAGGTTAAATTCATTGGCCAAGCTATTATGGAATCAAGACAG 494
                                                                                  

consensus_8868#2      CCCGAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTCTAGAGTGCACAGGC 359
consensus_8868#3      -------------------NGCCCC---CACCGGCNTCCTTTCCTCCN-AGTGGCCAGGT 37
consensus_8868#0      CACGAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTCTCGAGTGCACAGGC 3477
consensus_8868#1      CACGAAGCCGCAGAGGAGGAGCTCCAAGCACGAGCAGGCTCGACTCTCGAGTGCACAGGC 554
                                          ** **   ***  **   **   ***   ****  **** 

consensus_8868#2      GGACAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAGGTCGGTGGACGAGC 419
consensus_8868#3      TAAATTCATTGGCCAAG-CTATTATGGAATCAAGACAGCTCGATAGGTCGGTGGACGAGC 96
consensus_8868#0      GGACAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAGGTCGGTGGACGAGC 3537
consensus_8868#1      GGACAAGCTCGAGCACGACGGGCGGCGTGACGGGCGAGCTCGATAGGTCGGTGGACGAGC 614
                        *     * *  ** * *       *   *  *  ************************

consensus_8868#2      TCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATTGGCGGCAACACAAA 479
consensus_8868#3      TCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATCGGCGGCAANACAAA 156
consensus_8868#0      TCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATCGGCGGCAACACAAA 3597
consensus_8868#1      TCAACGAATCAGAGCAATCTGGAAGGAGGCGAGTAGGAATGAGATCGGCGGCAACACAAA 674
                      ********************************************* ******** *****

consensus_8868#2      TGGCAAGCTCCATATCAGCGATACGTTGAATGAATCCCCCCTTGATGTGGAGATTTTACT 539
consensus_8868#3      TGGCAAGCTCCATAGCAGCGCTACGTTGAATGAATCCCACCTTGATGTCGAGATTTTACT 216
consensus_8868#0      TGGCAAGCTCCATAGCAGCGCTACGTTGAATGAATCCCACCTTGATGTCGAGATTTTACT 3657
consensus_8868#1      TGGCAAGCTCCATAGCAGCGCTACGTTGAATGAATCCCACCT------------------ 716
                      ************** ***** ***************** ***                  

consensus_8868#2      TCCCATCATACCCTTTGTAATGGACAGTTGGATATGAATGGTACCTCGTACCTCATAGTC 599
consensus_8868#3      TCCCATCATACCCTTTGTAATGGACAGTTGGATATGAATGGTACCTCGTACCTCATAGTA 276
consensus_8868#0      TCCCATCATACCCTTTGTAATGGACAGTTGGATATGAATGGTACCTCGTACCTCATAGTA 3717
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      CCTTGTGAGTCCTTTTCAAGGATGGGAAAGATGCTCATAAAATTTGATGGGGTTTATAAA 659
consensus_8868#3      CCTTGTGAGACCTTTTCAAGGATGGGAAAGATGCTCATAAAATTTGCTTAAAAAAAAAAA 336
consensus_8868#0      CCTTGTGAGACCTTTTCAAGGATGGGAAAGATGCTCATAAAATTTGCTTACGTTTATAAA 3777
consensus_8868#1      ------------------------------------------------------------
                                                                                  

consensus_8868#2      GTGCTCCTGAAGCTTAAATGGTCAAAAAAGGGGAAA 695
consensus_8868#3      AA---------------------------------- 338
consensus_8868#0      GTGCTGCAGAAGC----------------------- 3790
consensus_8868#1      ------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)