cluster # 8875

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8875 cluster # 8875 Sequences # 6 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8875#0 length = 3058 sequences # 5

consensus_8875#1 length = 451 sequences # 1

consensusID : consensus_8875#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 3058
fasta sequence

                              [AGAGATCCTCGCCTCCCGCCGCTAACTCTCGGTCTCGCCATCGCCAAAACTCAGATTAGGTCGGTGGCCGCGCCGCTGCTCACCGGCGGATGGATCTTGTGTCATCTCGATTCGCAGCCGACGGCGTGTTCGTCCCGGCCCAGGGGAATAGTTTCCAGTCGTGCATCGTGCTTGGATTTTTTTTCTTTTTTGGGGGGAGTTGGGAGTTTGATTTAGCGGCGGCCTTTCCTGCATTCGAATTAGAGAGATGCTTGGGCCATTGGCGTTGGAGTTTCCAGCCTGGGTGATCTGAATGAACCCAATCTGCAGAATGTTCTCTCCCTTTCCGGTTGCCCCGGGGGAGGGATTGATGGAATGGGATAGGGTGGGGGGCTTTATTCTGATGATTTTGAATGAACTCAAGCCACAGAATGTTCTACAGGTCTCAAATTATTCTGTTGGTCTATCGGGTAGTCTTCGATGCTGTATGTAATTCCAGTTAGGCTCCGGTTTGAGATTATTTTTTTCTTGCAGTAAATTGGTAGGTTTCATGAACTCCTGCTCAGCTGCGGACGCGAGCGTCTGCGATTTGATCCAAGCTGGGGAGCTCAATCTTCGGAGAACATGGATATGCATTGTTCTGTTATTCTCGACAAGCCGACATCATCGTTCTTGTTCAGGGGATTGACTGATGGATCCTGAAAACCCCGATGTTTTTCGCAGATTTATTTTGTACTACAAGTTTGAGATTCAGAGTTCATACACTATAGACTATGGGTGAGTTTGAGAGGAGGGGAAAAGAGAAGATTGGGAAGATACGCAAAACGAGTCAAGCAGTAGTGGTGCCAGATCAAACCTTCCAGTCTCAACAGGAAAGCCGTTGACACCGACCTTTTCTGGTCAATCTGGATCAGTTTCAGGTTTTCGTCATCCTGGTTCACTAGCACCAAGGGGTTCCTCAATGACTGGTAGTTCATCCCTTGGGGTTCAACCACCTAGGGGTAGTATTTCTGGTGCTTGGTTTCCTCCAAATAGTCTTCAAGCATCCATTTATCAGGTCGGGTATCCTGCTCTCAGCAACCGAGGAGGTATGCATGTTGGGGGAAGTCCTGTTTTTACTGCTGCTCCAGTTTGTGGGAATTTTGGCCCGCGAATAACTTATGTGGCTAGCGTTGCGGGTGGGGGCAACATTGGGAGAACCATAAGCTCTGCCGGAATGTCTATGCCTACTGTTGCATCCCCTGTGAATTTGTCTGGAAGTGGGGCTCTTAATATCCGAGGATCAAACCAAATGGGTGGTACTCATCAACAAGGATTGCCGGCTATGAATATGCTTGGAAGCTCTAGTTCAGCACCTGGAGGAACACTATCTAAGAACCAATTGCAGGCAGGAAGCAGTTCGTCTGGTTCTCCAGGAATGCGACATGATGGTAACTTTGGTGAAAATTCTCTATTTGACATCAATGATTTTCCTCAATTAGTTGGGCGACCTAATTCTGCTGGAAATATTCAGGGGTTATATGGTAATGCTGACATGCAAACTAAATATTCTGAATGATAATATTAGTTAACTAACTTTTCTCCTTTATAACAAATGAAGGACCTCTAAGACAACAAGCATTTGGTATTAATGCTGTTCAGCAAAACCAGGAATTTAGAATCCATAATGAGGACTTCCCAGCTTTACCAAGATTGGAAGGTATGGAGTTGCATCGCAAGGATCATCTTCCTAAGAATGCAAATATTATGCAAGCACAACATTATCCTATGGGCAAATCATCTGGCTTTAACACGGGCAGCAGTTGTCCACCCCGTAAACAACATAAGCAGACAGCTAATTCGGTTCAAAATACTGGGCCTGAAAATGTTGGACCAAAGCCAGTAAATTCTCCAAGGTTGCCTTTAAATCCGAGGCCTCGTGAACAAGTTATCCAGCAAAATCATGAACCACAGGCTCAGAAGTCAGTTAGGCTGCAGTCATCTTCCGGCCCAGAGTCTCACAAGGTTCAGAGTCCCAAGTCTTCTCAGAGAACTGATACCACACCAGAGTCTTACAAGGTTCAGAGTCCCAAGCCTTCTCAGAGAACCGATACCGCACCAGAGTCTCACAAGGTTCAGAGTCCCAAGTCTTCTCAGAGAACTGATACCGCACCGGATCCATATGATCCATATGGCTTACATGGACTACTGAGGGTAATGAAGTTGAAAGAGGAGGGACCGGCATCTCTTGCTTTAGGGATTGATTTGACAACACTAGGGTTGGATATGAACTCTTCAGATAATCTTTACAAGACATTTGGCTCTCCTTGGTCAAGTGAGCCAGTTAAAGAAGAGTATTCTTATGAAATTCCGGATTGCTACTCTTCTATGCAGCCTCCACCCCTGCAAGCGTTGCATTTTCTGAGGTTTCACCTCATGACACTATTCTACATCTTCTACAGTATGCCACAGGATGCAGCTCAGTTATATGCCGCGAATGAAATATGCAAATACGGGTGGGTTTACCACAAAGAGCTGCGTCAGTGGGTTAAAAGAGCTCCTAATACGACCCCTCTCGTCAAAACTACAACTTATGAACAAGGACTCTGCTATCTTTTTGATGCCAACATTTGGGATGCAATTCCTAAGGACAACTTT-ATTCTCCGTTATGACGATATCGAGAAGATACCTGCCCTTCCTCCCCTTCTTCCTGCCACCCAAAATCCTGCCACCCAAAATGGTAGTGTAAGAATAAACAAGCCATTGCAGTAGGTTCTCCGTGTTGAAGATTAGAGTTTCATGGCTTGGATCAATTGTTGGTATTATTAAGGGTATGCATGCTGGTTCTGGGGATCGGAGCTCCTGCGATGGCCGGCGTTTGTGGTAGCTGCGAAATACCGCGGTTCATAATTCGTTGGCTGCAATCAGTTAAACCCATTTTTAAGTTTTGAAACAAAGTTGAACCCCGTTTTAATTATGTTTCGGTCTTGTGATGACTGAATGTTTTGAATGTTTAAACCTGTTTTTACCTGTACCGTACCAGATATGTCGTTTAAACTTATCAGGCACCGACATTTTGGATCTTGAAAAAAAAAAAAAA]

[+] EMBL AK073521             [AGAGATCCTCGCCTCCCGCCGCTAACTCTCGGTCTCGCCATCGCCAAAACTCAGATTAGGTCGGTGGCCGCGCCGCTGCTCACCGGCGGATGGATCTTGTGTCATCTCGATTCGCAGCCGACGGCGTGTTCGTCCCGGCCCAGGGGAATAGTTTCCAGTCGTGCATCGTGCTTGGATTTTTTTTCTTTTTTGGGGGGAGTTGGGAGTTTGATTTAGCGGCGGCCTTTCCTGCATTCGAATTAGAGAGATGCTTGGGCCATTGGCGTTGGAGTTTCCAGCCTGGGTGATCTGAATGAACCCAATCTGCAGAATGTTCTCTCCCTTTCCGGTTGCCCCGGGGGAGGGATTGATGGAATGGGATAGGGTGGGGGGCTTTATTCTGATGATTTTGAATGAACTCAAGCCACAGAATGTTCTACAGGTCTCAAATTATTCTGTTGGTCTATCGGGTAGTCTTCGATGCTGTATGTAATTCCAGTTAGGCTCCGGTTTGAGATTATTTTTTTCTTGCAGTAAATTGGTAGGTTTCATGAACTCCTGCTCAGCTGCGGACGCGAGCGTCTGCGATTTGATCCAAGCTGGGGAGCTCAATCTTCGGAGAACATGGATATGCATTGTTCTGTTATTCTCGACAAGCCGACATCATCGTTCTTGTTCAGGGGATTGACTGATGGATCCTGAAAACCCCGATGTTTTTCGCAGATTTATTTTGTACTACAAGTTTGAGATTCAGAGTTCATACACTATAGACTATGGGTGAGTTTGAGAGGAGGGGAAAAGAGAAGATTGGGAAGATACGCAAAACGAGTCAAGCAGTAGTGGTGCCAGATCAAACCTTCCAGTCTCAACAGGAAAGCCGTTGACACCGACCTTTTCTGGTCAATCTGGATCAGTTTCAGGTTTTCGTCATCCTGGTTCACTAGCACCAAGGGGTTCCTCAATGACTGGTAGTTCATCCCTTGGGGTTCAACCACCTAGGGGTAGTATTTCTGGTGCTTGGTTTCCTCCAAATAGTCTTCAAGCATCCATTTATCAGGTCGGGTATCCTGCTCTCAGCAACCGAGGAGGTATGCATGTTGGGGGAAGTCCTGTTTTTACTGCTGCTCCAGTTTGTGGGAATTTTGGCCCGCGAATAACTTATGTGGCTAGCGTTGCGGGTGGGGGCAACATTGGGAGAACCATAAGCTCTGCCGGAATGTCTATGCCTACTGTTGCATCCCCTGTGAATTTGTCTGGAAGTGGGGCTCTTAATATCCGAGGATCAAACCAAATGGGTGGTACTCATCAACAAGGATTGCCGGCTATGAATATGCTTGGAAGCTCTAGTTCAGCACCTGGAGGAACACTATCTAAGAACCAATTGCAGGCAGGAAGCAGTTCGTCTGGTTCTCCAGGAATGCGACATGATGGTAACTTTGGTGAAAATTCTCTATTTGACATCAATGATTTTCCTCAATTAGTTGGGCGACCTAATTCTGCTGGAAATATTCAGGGGTTATATGGTAATGCTGACATGCAAACTAAATATTCTGAATGATAATATTAGTTAACTAACTTTTCTCCTTTATAACAAATGAAGGACCTCTAAGACAACAAGCATTTGGTATTAATGCTGTTCAGCAAAACCAGGAATTTAGAATCCATAATGAGGACTTCCCAGCTTTACCAAGATTGGAAGGTATGGAGTTGCATCGCAAGGATCATCTTCCTAAGAATGCAAATATTATGCAAGCACAACATTATCCTATGGGCAAATCATCTGGCTTTAACACGGGCAGCAGTTGTCCACCCCGTAAACAACATAAGCAGACAGCTAATTCGGTTCAAAATACTGGGCCTGAAAATGTTGGACCAAAGCCAGTAAATTCTCCAAGGTTGCCTTTAAATCCGAGGCCTCGTGAACAAGTTATCCAGCAAAATCATGAACCACAGGCTCAGAAGTCAGTTAGGCTGCAGTCATCTTCCGGCCCAGAGTCTCACAAGGTTCAGAGTCCCAAGTCTTCTCAGAGAACTGATACCACACCAGAGTCTTACAAGGTTCAGAGTCCCAAGCCTTCTCAGAGAACCGATACCGCACCAGAGTCTCACAAGGTTCAGAGTCCCAAGTCTTCTCAGAGAACTGATACCGCACCGGATCCATATGATCCATATGGCTTACATGGACTACTGAGGGTAATGAAGTTGAAAGAGGAGGGACCGGCATCTCTTGCTTTAGGGATTGATTTGACAACACTAGGGTTGGATATGAACTCTTCAGATAATCTTTACAAGACATTTGGCTCTCCTTGGTCAAGTGAGCCAGTTAAAGAAGAGTATTCTTATGAAATTCCGGATTGCTACTCTTCTATGCAGCCTCCACCCCTGCAAGCGTTGCATTTTCTGAGGTTTCACCTCATGACACTATTCTACATCTTCTACAGTATGCCACAGGATGCAGCTCAGTTATATGCCGCGAATGAAATATGCAAATACGGGTGGGTTTACCACAAAGAGCTGCGTCAGTGGGTTAAAAGAGCTCCTAATACGACCCCTCTCGTCAAAACTACAACTTATGAACAAGGACTCTGCTATCTTTTTGATGCCAACATTTGGGATGCAATTCCTAAGGACAACTTT ATTCTCCGTTATGACGATATCGAGAAGATACCTGCCCTTCCTCCCCTTCTTCCTGCCACCCAAAATCCTGCCACCCAAAATGGTAGTGTAAGAATAAACAAGCCATTGCAGTAGGTTCTCCGTGTTGAAGATTAGAGTTTCATGGCTTGGATCAATTGTTGGTATTATTAAGGGTATGCATGCTGGTTCTGGGGATCGGAGCTCCTGCGATGGCCGGCGTTTGTGGTAGCTGCGAAATACCGCGGTTCATAATTCGTTGGCTGCAATCAGTTAAACCCATTTTTAAGTTTTGAAACAAAGTTGAACCCCGTTTTAATTATGTTTCGGTCTTGTGATGACTGAATGTTTTGAATGTTTAAACCTGTTTTTACCTGTACCGTACCAGATATGTCGTTTAAACTTATCAGGCACCGACATT                        ]
[-] EMBL CA762683             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGTTTCACCTCATGACACTATTCTACACCTTTTACAGTATGCCACAGGATGCAGCTCAGTTATATGCCGCGAATGAAATATGCAAATACGGGTGGGTTTACCACAAAGAGCTGCGTCAGTGGGTTAAAAGAGCTCCTAATACGACCCCTCTCGTCAAAACTACAACTTATGAACAAGGGCTTTGCTATCTTTTTGATGCCAACATTTGGGATGCAATTCCTAAGGACAACTTT ATTCTCCGTTATGATGATATCGAGAAGATACCTGCCCTTCCTCCCCTTTTTCCTGCCACCCAAAATCCTGCCCCCCAAAATGGTAGTGTAAGAATAAACAAGCCCTTGCAGTAGGTTTTCCGTGTTGAAGATTAGAGTTTCATGGCTTGGATCAATTGTTGGTATTATTAAGGGTATGCATGCTGGTTTTGGGGATTGGAGCTCCTGCGATGGCCGGCGTTTGTGGTAACTGCGAAATACCCCGGTTCATAATTCGTTGGCTGCAATCAGTTAAACCCATTTTTAAGTTTTGAAACAAAGTTGAACCCCGTTTTAATTATGTTTCGGTCTTGTGATGACTGAATGTTTTGAATGTTTAAACCTGTTTTTACCTGTACCGTACCAGATATGTCGTTTAAACTTATCAGGCACCGACATTTTGGATCTTGAAAAAAAAAAAAAA]
[+] EMBL C99222               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCAACATTTGGGATGCATTCCCTAAGGAC ACTTTNATTCT CGTTATGACGNTATCGAG AGATA CTG CCTTCCTCCCCTTCTT CTGCCACCC AAATCCTGCCNCCC AAATGGTAGTGTAAGANTAAAC AGCCATTGCAGTAGGTTCTCCGTGTTGAAGATTAGAGTTTCA GGCTTGGATCAATTGTTGGTATTATTAAGGGTATGCATGCTGGTTCTGGGGATCGGAGCTCCTGCGATGGCCGGCGTTTGTGGTAGCTGCGAAATACCGCGGTTCATAATTCGTTGGCTGCAATCAGTTAAACCCATTTTTAAGTTTTGAAACAAAGTTGAACCCCGTTTTAATTATGTTTCGGTCTTGTGATGACTGAATGTTTTGAATGTTTAAACCTGTTTTTACCTGTACCGTACCAGATATGTCGTTTAAACTTATCAGGCACCGACATTTTGGATCTTGA             ]
[+] EMBL AA749747             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GATACCTGCCCTTCCTCCCCTTGTTCCTGCCACCCAAAATCCTGCCACCCAAAATGGTAGTGTAAGAATAAACAAGCCATTGCAGTAGGTTCTCCGTGTTGAAGATTAGAGTTTCATGGCTTGGATCAATTGTTGGTATTATTAAGGGTATGCATGC                                                                                                                                                                                                                                                                   ]
[+] EMBL BI794968             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAGTTTTGAAAC AAGTTGAACCCCGTTTTAATTATGTTTCGGTCTTGTGATGACTGAATGTTTTGAATGTTTAAACCTGTTTTTACCTGTACCGTACCAGATATGTCGTTTAAACTTATCAGGCACCGACATTTTGGATCTTGAAAAA         ]




>consensus_8875#0
AGAGATCCTCGCCTCCCGCCGCTAACTCTCGGTCTCGCCATCGCCAAAACTCAGATTAGG
TCGGTGGCCGCGCCGCTGCTCACCGGCGGATGGATCTTGTGTCATCTCGATTCGCAGCCG
ACGGCGTGTTCGTCCCGGCCCAGGGGAATAGTTTCCAGTCGTGCATCGTGCTTGGATTTT
TTTTCTTTTTTGGGGGGAGTTGGGAGTTTGATTTAGCGGCGGCCTTTCCTGCATTCGAAT
TAGAGAGATGCTTGGGCCATTGGCGTTGGAGTTTCCAGCCTGGGTGATCTGAATGAACCC
AATCTGCAGAATGTTCTCTCCCTTTCCGGTTGCCCCGGGGGAGGGATTGATGGAATGGGA
TAGGGTGGGGGGCTTTATTCTGATGATTTTGAATGAACTCAAGCCACAGAATGTTCTACA
GGTCTCAAATTATTCTGTTGGTCTATCGGGTAGTCTTCGATGCTGTATGTAATTCCAGTT
AGGCTCCGGTTTGAGATTATTTTTTTCTTGCAGTAAATTGGTAGGTTTCATGAACTCCTG
CTCAGCTGCGGACGCGAGCGTCTGCGATTTGATCCAAGCTGGGGAGCTCAATCTTCGGAG
AACATGGATATGCATTGTTCTGTTATTCTCGACAAGCCGACATCATCGTTCTTGTTCAGG
GGATTGACTGATGGATCCTGAAAACCCCGATGTTTTTCGCAGATTTATTTTGTACTACAA
GTTTGAGATTCAGAGTTCATACACTATAGACTATGGGTGAGTTTGAGAGGAGGGGAAAAG
AGAAGATTGGGAAGATACGCAAAACGAGTCAAGCAGTAGTGGTGCCAGATCAAACCTTCC
AGTCTCAACAGGAAAGCCGTTGACACCGACCTTTTCTGGTCAATCTGGATCAGTTTCAGG
TTTTCGTCATCCTGGTTCACTAGCACCAAGGGGTTCCTCAATGACTGGTAGTTCATCCCT
TGGGGTTCAACCACCTAGGGGTAGTATTTCTGGTGCTTGGTTTCCTCCAAATAGTCTTCA
AGCATCCATTTATCAGGTCGGGTATCCTGCTCTCAGCAACCGAGGAGGTATGCATGTTGG
GGGAAGTCCTGTTTTTACTGCTGCTCCAGTTTGTGGGAATTTTGGCCCGCGAATAACTTA
TGTGGCTAGCGTTGCGGGTGGGGGCAACATTGGGAGAACCATAAGCTCTGCCGGAATGTC
TATGCCTACTGTTGCATCCCCTGTGAATTTGTCTGGAAGTGGGGCTCTTAATATCCGAGG
ATCAAACCAAATGGGTGGTACTCATCAACAAGGATTGCCGGCTATGAATATGCTTGGAAG
CTCTAGTTCAGCACCTGGAGGAACACTATCTAAGAACCAATTGCAGGCAGGAAGCAGTTC
GTCTGGTTCTCCAGGAATGCGACATGATGGTAACTTTGGTGAAAATTCTCTATTTGACAT
CAATGATTTTCCTCAATTAGTTGGGCGACCTAATTCTGCTGGAAATATTCAGGGGTTATA
TGGTAATGCTGACATGCAAACTAAATATTCTGAATGATAATATTAGTTAACTAACTTTTC
TCCTTTATAACAAATGAAGGACCTCTAAGACAACAAGCATTTGGTATTAATGCTGTTCAG
CAAAACCAGGAATTTAGAATCCATAATGAGGACTTCCCAGCTTTACCAAGATTGGAAGGT
ATGGAGTTGCATCGCAAGGATCATCTTCCTAAGAATGCAAATATTATGCAAGCACAACAT
TATCCTATGGGCAAATCATCTGGCTTTAACACGGGCAGCAGTTGTCCACCCCGTAAACAA
CATAAGCAGACAGCTAATTCGGTTCAAAATACTGGGCCTGAAAATGTTGGACCAAAGCCA
GTAAATTCTCCAAGGTTGCCTTTAAATCCGAGGCCTCGTGAACAAGTTATCCAGCAAAAT
CATGAACCACAGGCTCAGAAGTCAGTTAGGCTGCAGTCATCTTCCGGCCCAGAGTCTCAC
AAGGTTCAGAGTCCCAAGTCTTCTCAGAGAACTGATACCACACCAGAGTCTTACAAGGTT
CAGAGTCCCAAGCCTTCTCAGAGAACCGATACCGCACCAGAGTCTCACAAGGTTCAGAGT
CCCAAGTCTTCTCAGAGAACTGATACCGCACCGGATCCATATGATCCATATGGCTTACAT
GGACTACTGAGGGTAATGAAGTTGAAAGAGGAGGGACCGGCATCTCTTGCTTTAGGGATT
GATTTGACAACACTAGGGTTGGATATGAACTCTTCAGATAATCTTTACAAGACATTTGGC
TCTCCTTGGTCAAGTGAGCCAGTTAAAGAAGAGTATTCTTATGAAATTCCGGATTGCTAC
TCTTCTATGCAGCCTCCACCCCTGCAAGCGTTGCATTTTCTGAGGTTTCACCTCATGACA
CTATTCTACATCTTCTACAGTATGCCACAGGATGCAGCTCAGTTATATGCCGCGAATGAA
ATATGCAAATACGGGTGGGTTTACCACAAAGAGCTGCGTCAGTGGGTTAAAAGAGCTCCT
AATACGACCCCTCTCGTCAAAACTACAACTTATGAACAAGGACTCTGCTATCTTTTTGAT
GCCAACATTTGGGATGCAATTCCTAAGGACAACTTTATTCTCCGTTATGACGATATCGAG
AAGATACCTGCCCTTCCTCCCCTTCTTCCTGCCACCCAAAATCCTGCCACCCAAAATGGT
AGTGTAAGAATAAACAAGCCATTGCAGTAGGTTCTCCGTGTTGAAGATTAGAGTTTCATG
GCTTGGATCAATTGTTGGTATTATTAAGGGTATGCATGCTGGTTCTGGGGATCGGAGCTC
CTGCGATGGCCGGCGTTTGTGGTAGCTGCGAAATACCGCGGTTCATAATTCGTTGGCTGC
AATCAGTTAAACCCATTTTTAAGTTTTGAAACAAAGTTGAACCCCGTTTTAATTATGTTT
CGGTCTTGTGATGACTGAATGTTTTGAATGTTTAAACCTGTTTTTACCTGTACCGTACCA
GATATGTCGTTTAAACTTATCAGGCACCGACATTTTGGATCTTGAAAAAAAAAAAAAA

consensusID : consensus_8875#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 451
fasta sequence

                              [TCAAAGTCGACACAGTCAAGCAGTAGTGGTGCCAGATCAAACCTTCCAGTCTCAACAGGAAAGCCGTTGACACCGACCTTTTCTGGTCAATCTGGATCAGTTTCAGGTTTTCGTCATCCTGGTTCACTAGCACCAAGGGGTTCCTCAATGACTGGTAGTTCATCCCTTGGGGTTCAACCACCTAGGGGTAGTATTTCTGGTGCTTGGTTTCCTCCAAATAGTCTTCAAGCATCCATTTATCANGTCGGGTATCCTGCTCTCAGCAANCGAGGAGGTATGCATGTTGGGGGAAGTCCTGTTTTTACTGCTGCTCCAGTTTGTGGGAATTTTNGCCCGCGAATAACTTATGTGGCTAGCGTTNCGGGTGGGGGCAACATTGGGAGAACCATAAACTCTGCCGGAATGTCTATGCCTANTGTTGCATCCCCTGTGAATTTGTCTGGAAATGGGG]

[+] EMBL C99223               [TCAAAGTCGACACAGTCAAGCAGTAGTGGTGCCAGATCAAACCTTCCAGTCTCAACAGGAAAGCCGTTGACACCGACCTTTTCTGGTCAATCTGGATCAGTTTCAGGTTTTCGTCATCCTGGTTCACTAGCACCAAGGGGTTCCTCAATGACTGGTAGTTCATCCCTTGGGGTTCAACCACCTAGGGGTAGTATTTCTGGTGCTTGGTTTCCTCCAAATAGTCTTCAAGCATCCATTTATCANGTCGGGTATCCTGCTCTCAGCAANCGAGGAGGTATGCATGTTGGGGGAAGTCCTGTTTTTACTGCTGCTCCAGTTTGTGGGAATTTTNGCCCGCGAATAACTTATGTGGCTAGCGTTNCGGGTGGGGGCAACATTGGGAGAACCATAAACTCTGCCGGAATGTCTATGCCTANTGTTGCATCCCCTGTGAATTTGTCTGGAAATGGGG]




>consensus_8875#1
TCAAAGTCGACACAGTCAAGCAGTAGTGGTGCCAGATCAAACCTTCCAGTCTCAACAGGA
AAGCCGTTGACACCGACCTTTTCTGGTCAATCTGGATCAGTTTCAGGTTTTCGTCATCCT
GGTTCACTAGCACCAAGGGGTTCCTCAATGACTGGTAGTTCATCCCTTGGGGTTCAACCA
CCTAGGGGTAGTATTTCTGGTGCTTGGTTTCCTCCAAATAGTCTTCAAGCATCCATTTAT
CANGTCGGGTATCCTGCTCTCAGCAANCGAGGAGGTATGCATGTTGGGGGAAGTCCTGTT
TTTACTGCTGCTCCAGTTTGTGGGAATTTTNGCCCGCGAATAACTTATGTGGCTAGCGTT
NCGGGTGGGGGCAACATTGGGAGAACCATAAACTCTGCCGGAATGTCTATGCCTANTGTT
GCATCCCCTGTGAATTTGTCTGGAAATGGGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8875#0      AGAGATCCTCGCCTCCCGCCGCTAACTCTCGGTCTCGCCATCGCCAAAACTCAGATTAGG 60
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      TCGGTGGCCGCGCCGCTGCTCACCGGCGGATGGATCTTGTGTCATCTCGATTCGCAGCCG 120
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      ACGGCGTGTTCGTCCCGGCCCAGGGGAATAGTTTCCAGTCGTGCATCGTGCTTGGATTTT 180
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      TTTTCTTTTTTGGGGGGAGTTGGGAGTTTGATTTAGCGGCGGCCTTTCCTGCATTCGAAT 240
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      TAGAGAGATGCTTGGGCCATTGGCGTTGGAGTTTCCAGCCTGGGTGATCTGAATGAACCC 300
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      AATCTGCAGAATGTTCTCTCCCTTTCCGGTTGCCCCGGGGGAGGGATTGATGGAATGGGA 360
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      TAGGGTGGGGGGCTTTATTCTGATGATTTTGAATGAACTCAAGCCACAGAATGTTCTACA 420
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      GGTCTCAAATTATTCTGTTGGTCTATCGGGTAGTCTTCGATGCTGTATGTAATTCCAGTT 480
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      AGGCTCCGGTTTGAGATTATTTTTTTCTTGCAGTAAATTGGTAGGTTTCATGAACTCCTG 540
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      CTCAGCTGCGGACGCGAGCGTCTGCGATTTGATCCAAGCTGGGGAGCTCAATCTTCGGAG 600
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      AACATGGATATGCATTGTTCTGTTATTCTCGACAAGCCGACATCATCGTTCTTGTTCAGG 660
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      GGATTGACTGATGGATCCTGAAAACCCCGATGTTTTTCGCAGATTTATTTTGTACTACAA 720
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      GTTTGAGATTCAGAGTTCATACACTATAGACTATGGGTGAGTTTGAGAGGAGGGGAAAAG 780
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      AGAAGATTGGGAAGATACGCAAAACGAGTCAAGCAGTAGTGGTGCCAGATCAAACCTTCC 840
consensus_8875#1      ------------TCAAAGTCGACAC-AGTCAAGCAGTAGTGGTGCCAGATCAAACCTTCC 47
                                    * *  * * ** **********************************

consensus_8875#0      AGTCTCAACAGGAAAGCCGTTGACACCGACCTTTTCTGGTCAATCTGGATCAGTTTCAGG 900
consensus_8875#1      AGTCTCAACAGGAAAGCCGTTGACACCGACCTTTTCTGGTCAATCTGGATCAGTTTCAGG 107
                      ************************************************************

consensus_8875#0      TTTTCGTCATCCTGGTTCACTAGCACCAAGGGGTTCCTCAATGACTGGTAGTTCATCCCT 960
consensus_8875#1      TTTTCGTCATCCTGGTTCACTAGCACCAAGGGGTTCCTCAATGACTGGTAGTTCATCCCT 167
                      ************************************************************

consensus_8875#0      TGGGGTTCAACCACCTAGGGGTAGTATTTCTGGTGCTTGGTTTCCTCCAAATAGTCTTCA 1020
consensus_8875#1      TGGGGTTCAACCACCTAGGGGTAGTATTTCTGGTGCTTGGTTTCCTCCAAATAGTCTTCA 227
                      ************************************************************

consensus_8875#0      AGCATCCATTTATCAGGTCGGGTATCCTGCTCTCAGCAACCGAGGAGGTATGCATGTTGG 1080
consensus_8875#1      AGCATCCATTTATCANGTCGGGTATCCTGCTCTCAGCAANCGAGGAGGTATGCATGTTGG 287
                      *************** *********************** ********************

consensus_8875#0      GGGAAGTCCTGTTTTTACTGCTGCTCCAGTTTGTGGGAATTTTGGCCCGCGAATAACTTA 1140
consensus_8875#1      GGGAAGTCCTGTTTTTACTGCTGCTCCAGTTTGTGGGAATTTTNGCCCGCGAATAACTTA 347
                      ******************************************* ****************

consensus_8875#0      TGTGGCTAGCGTTGCGGGTGGGGGCAACATTGGGAGAACCATAAGCTCTGCCGGAATGTC 1200
consensus_8875#1      TGTGGCTAGCGTTNCGGGTGGGGGCAACATTGGGAGAACCATAAACTCTGCCGGAATGTC 407
                      ************* ****************************** ***************

consensus_8875#0      TATGCCTACTGTTGCATCCCCTGTGAATTTGTCTGGAAGTGGGGCTCTTAATATCCGAGG 1260
consensus_8875#1      TATGCCTANTGTTGCATCCCCTGTGAATTTGTCTGGAAATGGGG---------------- 451
                      ******** ***************************** *****                

consensus_8875#0      ATCAAACCAAATGGGTGGTACTCATCAACAAGGATTGCCGGCTATGAATATGCTTGGAAG 1320
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      CTCTAGTTCAGCACCTGGAGGAACACTATCTAAGAACCAATTGCAGGCAGGAAGCAGTTC 1380
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      GTCTGGTTCTCCAGGAATGCGACATGATGGTAACTTTGGTGAAAATTCTCTATTTGACAT 1440
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      CAATGATTTTCCTCAATTAGTTGGGCGACCTAATTCTGCTGGAAATATTCAGGGGTTATA 1500
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      TGGTAATGCTGACATGCAAACTAAATATTCTGAATGATAATATTAGTTAACTAACTTTTC 1560
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      TCCTTTATAACAAATGAAGGACCTCTAAGACAACAAGCATTTGGTATTAATGCTGTTCAG 1620
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      CAAAACCAGGAATTTAGAATCCATAATGAGGACTTCCCAGCTTTACCAAGATTGGAAGGT 1680
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      ATGGAGTTGCATCGCAAGGATCATCTTCCTAAGAATGCAAATATTATGCAAGCACAACAT 1740
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      TATCCTATGGGCAAATCATCTGGCTTTAACACGGGCAGCAGTTGTCCACCCCGTAAACAA 1800
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      CATAAGCAGACAGCTAATTCGGTTCAAAATACTGGGCCTGAAAATGTTGGACCAAAGCCA 1860
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      GTAAATTCTCCAAGGTTGCCTTTAAATCCGAGGCCTCGTGAACAAGTTATCCAGCAAAAT 1920
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      CATGAACCACAGGCTCAGAAGTCAGTTAGGCTGCAGTCATCTTCCGGCCCAGAGTCTCAC 1980
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      AAGGTTCAGAGTCCCAAGTCTTCTCAGAGAACTGATACCACACCAGAGTCTTACAAGGTT 2040
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      CAGAGTCCCAAGCCTTCTCAGAGAACCGATACCGCACCAGAGTCTCACAAGGTTCAGAGT 2100
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      CCCAAGTCTTCTCAGAGAACTGATACCGCACCGGATCCATATGATCCATATGGCTTACAT 2160
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      GGACTACTGAGGGTAATGAAGTTGAAAGAGGAGGGACCGGCATCTCTTGCTTTAGGGATT 2220
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      GATTTGACAACACTAGGGTTGGATATGAACTCTTCAGATAATCTTTACAAGACATTTGGC 2280
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      TCTCCTTGGTCAAGTGAGCCAGTTAAAGAAGAGTATTCTTATGAAATTCCGGATTGCTAC 2340
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      TCTTCTATGCAGCCTCCACCCCTGCAAGCGTTGCATTTTCTGAGGTTTCACCTCATGACA 2400
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      CTATTCTACATCTTCTACAGTATGCCACAGGATGCAGCTCAGTTATATGCCGCGAATGAA 2460
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      ATATGCAAATACGGGTGGGTTTACCACAAAGAGCTGCGTCAGTGGGTTAAAAGAGCTCCT 2520
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      AATACGACCCCTCTCGTCAAAACTACAACTTATGAACAAGGACTCTGCTATCTTTTTGAT 2580
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      GCCAACATTTGGGATGCAATTCCTAAGGACAACTTTATTCTCCGTTATGACGATATCGAG 2640
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      AAGATACCTGCCCTTCCTCCCCTTCTTCCTGCCACCCAAAATCCTGCCACCCAAAATGGT 2700
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      AGTGTAAGAATAAACAAGCCATTGCAGTAGGTTCTCCGTGTTGAAGATTAGAGTTTCATG 2760
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      GCTTGGATCAATTGTTGGTATTATTAAGGGTATGCATGCTGGTTCTGGGGATCGGAGCTC 2820
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      CTGCGATGGCCGGCGTTTGTGGTAGCTGCGAAATACCGCGGTTCATAATTCGTTGGCTGC 2880
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      AATCAGTTAAACCCATTTTTAAGTTTTGAAACAAAGTTGAACCCCGTTTTAATTATGTTT 2940
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      CGGTCTTGTGATGACTGAATGTTTTGAATGTTTAAACCTGTTTTTACCTGTACCGTACCA 3000
consensus_8875#1      ------------------------------------------------------------
                                                                                  

consensus_8875#0      GATATGTCGTTTAAACTTATCAGGCACCGACATTTTGGATCTTGAAAAAAAAAAAAAA 3058
consensus_8875#1      ----------------------------------------------------------