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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8878#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2905 fasta sequence
[TACACCGCTTCGTGGAGAGCAACAGGATAGAGCTGGACTTGAAGCTTGGCACTGCTCTGATCGACATGTATGCCAAGTGTGGTGACATTGAGAGTGCACAGAGAGTGTTCGACAGAATGCCAGAGAAGGATGTGCAAACTTGGAGTTCAATGATTATCGGACTGGCCAATCACGGGCTTGGCCATGAGTCGCTCAGCTTGTTCTCGAAGATGATATCTGAAGGGATGAAACCGAATGGGGTCACCTTCGTCGGTGTTCTTATCGCGTGTACTCATGTTGGCCTTGTGAGCGAAGGCAAGAAGTATTTTAGATCAATGAATGAAGTTCATGGTATAGAGCCAACAGTTGAGCACTATGGATGTATGGTTGATCTTCTGGGGCGTTCAGGCCATGTTGAGGAGGCAAGACAACTCATCAGGAGCATGACATTCGAACCCGACACAATTATCTGGAGAGCACTACTTGGGGCCTGTCGCATCCATAAGAATGTGGAGATTGCAGAGGAAGCCATGGCCAAACTGCGAGTTCTGGATCCTCTTGGTGATGGACACTATGTGCTATTGTCAAATATATATGCACAGGCAAACTCTTGGGAAGGTGTTGCAGAAATGAGGAAGACGATTAGAAGGGACAATATTCAGAGGATTCCTGGAAGAAGTTCAATTGAATGGGATGAAAAGATTCATGAGTTTGTCTCTGGTGATAGATTGCATCCAAGGTCCAAGGAGATCTACAGAGTGTTGGAAGAGATGATGGATCGGTTAAAACAAGCAGGTTATAAGCCTATGACAGGTTTGGTATTGCAAGATATTGATGAGCAATCTAAGGAACGCTCCTTGGCTGAACATAGTGAGAAGCTGGCCATTGCTTTTGCGCTGCTAACTACCCCTGCGAGGTCAACTATTCGAATAACGAAGAATCTTAGAGCTTGTGAAGATTGCCATTCAGCTATGAAGTTGATCTCCTTGGTGTATGATCGCAAGTTGGTTGTTAGAGACCGGAACCGTTTCCATCATTTCAGTGAAGGGCAGTGCTCATGCAAGGATTACTGGTGAACTTAACATGCTTTTACCAAAACAAGACACAAACTTACACATTCAACACATAACTTCAAAGGAACACAAGATGAGGGAATCAGGTTTGGACGGATAGGGGGAAGGTTTTCACTGGAGGAATTTAGCCCCAGCTAATTCTTGATGTCAATTGCATCTCCTACAGAAACAAGGTTTAATGAACAATCGGGAGGCAGAGATCTGATCAACAGCCGCAACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTACTAAATCATTGGGCAGTACCAAATCATTGGGCAGTCACACTGGTGCGCATATGTTTTTGCTTTAGAGTCAGGAGCTCCATTTTCTAATCTTCCGCTTGCAAGAAGTAAGCCTCTCACGGACATTTATCCACTAATGCAATCATTCGGTGAACCTAACACTTACAAAAATGGACTGAAAGTTGCCTAAAAGTGACTAGTAAAAGATCGCTCTGATTATTGGGTGATGTCGGCCAACCTCGTCAGAAAGCTCTTTTGGTGGCTTCTGGATTGGGTCTTAACCAGGCAGGCTTCAGAGCATGTAGAGCAACGACGGCCATCGGATCATCAGATTGTACGGCTCAGATGGCACATGAACCTTGCTCCTAATAGCCACATGATCTCATCAGCAAGTATCCCAATGCTCCAGTGGGCGATTCTCCGTGATGAGATTCGCAGGGTTTGACGTGACAACCCAAGTTTGTTTTTGCTGCAGGGGAATCTGATAAACCCAAGTCTGCACGGGCGCATCATCACCCGACTAAAATACTCCGAGAAGCAAGAGCGCAGTAAAAGGAAAGGGAAATAATATTGCTTGCTGAAACTGAAAGACCCTTTGCCTTGTCCTACTACTTCCATGAGCAGGAAAAAAACATATTGGGTGGTCATTTCGTGTGCTCAATTGTTTATGCAGATGTCCAGGTCAAGAAACAGTAAAAAGGACAATTATTCTACTGCACACAAGGGGGAGAGTTATCCAAAGAGAGGTATTAGCAGCCAAGTTAAAAAAAAAATTAGTGCTATATCGCAGCCGGAGAGGAGTTCAGACGGCAACATCAATGGCGCAAGAGGCGTTGAACAGCAAGAGGAAGAAAGCAAGAGAGTAAAAAAAACACAAAAGAAAGGATTTCTGCTGAAACTCTGTGGGTTGCGAAGCTCACCTCGTGGAGGCGGACGACATTGGGGTGCTTGAGCAGCTTCAACGTGGCGATCTCCCTCTTTATCTGAGCAAGAAATTAATTAACCAGCCGGCCAAGCAAAGGAACAGGAACCCGGATGAGCAATCAATCAAGGTTAATTCACCTGTTCGTCGATCTTCATGGCGAGGATGCGTTGGCGGTCGAGGATCTTGATGGCGAAGGCGGCGCCGGTGTCGGCGTGGCGCGCCAGCTTCACCTTGCCGAAGTGCCCCTCTCCCAGCGCCCGCCCCATCTCGTACTTCCCCATCCGCATTGCCGGCGCCCGCCGCGGATGGGAGGGCCGCCGTCTCCGGCGCGCGCGCGCGCGGTGGCGGAGTTCGACACTCGCGAGAGGAGAGGAGAAGAGAAGGTTTGGTGGCGGCTTTGGGGGGAGTTGGAGGAAGGGCGTGAGACTTTGGGAATTCGGCTGGGTTTTTATTGGGAGTTGCCGAATGGCGACTCTTCCCGTTGCAGCCGCGACCGGGTCGGTGACCGGATTCATACTTGTCTTTTGCATTCCTTTCTCTTTTTTTTTTTGAAAGTTTTTTTTTTAATTTTTGTTGCTGTTGTGTAGGAGTATGTCTTTTGCTTTCGTATGCGTGTTTGAGCTGGATTTTTCACATTTTTGTCCTTTTAAAAAACTTATTTTGCAAATAGATCCATAGAAA]
[+] EMBL AK102097 [TACACCGCTTCGTGGAGAGCAACAGGATAGAGCTGGACTTGAAGCTTGGCACTGCTCTGATCGACATGTATGCCAAGTGTGGTGACATTGAGAGTGCACAGAGAGTGTTCGACAGAATGCCAGAGAAGGATGTGCAAACTTGGAGTTCAATGATTATCGGACTGGCCAATCACGGGCTTGGCCATGAGTCGCTCAGCTTGTTCTCGAAGATGATATCTGAAGGGATGAAACCGAATGGGGTCACCTTCGTCGGTGTTCTTATCGCGTGTACTCATGTTGGCCTTGTGAGCGAAGGCAAGAAGTATTTTAGATCAATGAATGAAGTTCATGGTATAGAGCCAACAGTTGAGCACTATGGATGTATGGTTGATCTTCTGGGGCGTTCAGGCCATGTTGAGGAGGCAAGACAACTCATCAGGAGCATGACATTCGAACCCGACACAATTATCTGGAGAGCACTACTTGGGGCCTGTCGCATCCATAAGAATGTGGAGATTGCAGAGGAAGCCATGGCCAAACTGCGAGTTCTGGATCCTCTTGGTGATGGACACTATGTGCTATTGTCAAATATATATGCACAGGCAAACTCTTGGGAAGGTGTTGCAGAAATGAGGAAGACGATTAGAAGGGACAATATTCAGAGGATTCCTGGAAGAAGTTCAATTGAATGGGATGAAAAGATTCATGAGTTTGTCTCTGGTGATAGATTGCATCCAAGGTCCAAGGAGATCTACAGAGTGTTGGAAGAGATGATGGATCGGTTAAAACAAGCAGGTTATAAGCCTATGACAGGTTTGGTATTGCAAGATATTGATGAGCAATCTAAGGAACGCTCCTTGGCTGAACATAGTGAGAAGCTGGCCATTGCTTTTGCGCTGCTAACTACCCCTGCGAGGTCAACTATTCGAATAACGAAGAATCTTAGAGCTTGTGAAGATTGCCATTCAGCTATGAAGTTGATCTCCTTGGTGTATGATCGCAAGTTGGTTGTTAGAGACCGGAACCGTTTCCATCATTTCAGTGAAGGGCAGTGCTCATGCAAGGATTACTGGTGAACTTAACATGCTTTTACCAAAACAAGACACAAACTTACACATTCAACACATAACTTCAAAGGAACACAAGATGAGGGAATCAGGTTTGGACGGATAGGGGGAAGGTTTTCACTGGAGGAATTTAGCCCCAGCTAATTCTTGATGTCAATTGCATCTCCTACAGAAACAAGGTTTAATGAACAATCGGGAGGCAGAGATCTGATCAACAGCCGCAACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTACTAAATCATTGGGCAGTACCAAATCATTGGGCAGTCACACTGGTGCGCATATGTTTTTGCTTTAGAGTCAGGAGCTCCATTTTCTAATCTTCCGCTTGCAAGAAGTAAGCCTCTCACGGACATTTATCCACTAATGCAATCATTCGGTGAACCTAACACTTACAAAAATGGACTGAAAGTTGCCTAAAAGTGACTAGTAAAAGATCGCTCTGATTATTGGGTGATGTCGGCCAACCTCGTCAGAAAGCTCTTTTGGTGGCTTCTGGATTGGGTCTTAACCAGGCAGGCTTCAGAGCATGTAGAGCAACGACGGCCATCGGATCATCAGATTGTACGGCTCAGATGGCACATGAACCTTGCTCCTAATAGCCACATGATCTCATCAGCAAGTATCCCAATGCTCCAGTGGGCGATTCTCCGTGATGAGATTCGCAGGGTTTGACGTGACAACCCAAGTTTGTTTTTGCTGCAGGGGAATCTGATAAACCCAAGTCTGCACGGGCGCATCATCACCCGACTAAAATACTCCGAGAAGCAAGAGCGCAGTAAAAGGAAAGGGAAATAATATTGCTTGCTGAAACTGAAAGACCCTTTGCCTTGTCCTACTACTTCCATGAGCAGGAAAAAAACATATTGGGTGGTCATTTCGTGTGCTCAATTGTTTATGCAGATGTCCAGGTCAAGAAACAGTAAAAAGGACAATTATTCTACTGCACACAAGGGGGAGAGTTATCCAAAGAGAGGTATTAGCAGCCAAGTTAAAAAAAAAATTAGTGCTATATCGCAGCCGGAGAGGAGTTCAGACGGCAACATCAATGGCGCAAGAGGCGTTGAACAGCAAGAGGAAGAAAGCAAGAGAGTAAAAAAAACACAAAAGAAAGGATTTCTGCTGAAACTCTGTGGGTTGCGAAGCTCACCTCGTGGAGGCGGACGACATTGGGGTGCTTGAGCAGCTTCAACGTGGCGATCTCCCTCTTTATCTGAGCAAGAAATTAATTAACCAGCCGGCCAAGCAAAGGAACAGGAACCCGGATGAGCAATCAATCAAGGTTAATTCACCTGTTCGTCGATCTTCATGGCGAGGATGCGTTGGCGGTCGAGGATCTTGATGGCGAAGGCGGCGCCGGTGTCGGCGTGGCGCGCCAGCTTCACCTTGCCGAAGTGCCCCTCTCCCAGCGCCCGCCCCATCTCGTACTTCCCCATCCGCATTGCCGGCGCCCGCCGCGGATGGGAGGGCCGCCGTCTCCGGCGCGCGCGCGCGCGGTGGCGGAGTTCGACACTCGCGAGAGGAGAGGAGAAGAGAAGGTTTGGTGGCGGCTTTGGGGGGAGTTGGAGGAAGGGCGTGAGACTTTGGGAATTCGGCTGGGTTTTTATTGGGAGTTGCCGAATGGCGACTCTTCCCGTTGCAGCCGCGACCGGGTCGGTGACCGGATTCATACTTGTCTTTTGCATTCCTTTCTCTTTTTTTTTTTGAAAGTTTTTTTTTTAATTTTTGTTGCTGTTGTGTAGGAGTATGTCTTTTGCTTTCGTATGCGTGTTTGAGCTGGATTTTTCACATTTTTGTCCTTTTAAAAAACTTATTTTGCAAATAGATCCATAGAAA]
consensusID : consensus_8878#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1764 fasta sequence
[CAAAGGAACACAACATGAGGTAACTATTTATGTCCACTTAGATTGTCTACATCATACTTTTATACACTGTCAGTAGCCAATTTGCCCAGGAGGTAGCGATTTACCAGTAAAGGCAAAAAGAACACAAACTAATGAACTCCTAAAGGAAATACTTGGATGATCGGTATACTCTTTTCGGTGTACAATTGGATTGTTTTGTATTTACAGTTTAATTTTACAAAACTGTGTCATACGTCGTTGTATTGGGGGCTCTTGTTAAAAATGCTAGAGCCTTCACAACTAAAAGCTAGAGAGACCCTTTTATCAAAAGCTACTGTTATATCGACAAAGGTCTTGTCTCATAGAATCTTTCTTCAAAAGCTGTTGCCTTTTGCATATGCCCAAGTCTTCAGAAAGTGACGCACATAGCTGTCTGTAAAGGGAACAATCCCCAGATGACCTTTTTAGCTCAACAACATAAAGAGATTCATTGATCTCAAACACCTCAGCAGAAATCAATAAATTTCCATGTCCTCTTGGATTTGCTGGTTCTTTACAAACTTGGATCACTTTTAGCTTGCCACTGTTCTTCTGTACCTGGAAACCCTTTTCTGTGACAGTGCTCTCAATCTTCTCAAATAGAGAAGTAGGGGAATAATTTGATACAAATCTGATTTTCCTTTCAGAAACATCTTCTTTCTCAAAAAATCCAGATAGATCAAGGCATGAGGACATCCCAATGAGCTGGAATGCATTGATTTGGCTGATTGCTGGGCTGGTTTCAATATCTTGATTCTCAGTCATATGTAGGTTGCCATCACTGATATTGTTGTCGTCATCATCATCGAAAGGCATAGCAGGAGTATAATCTTGCCTGAACCACTCATGTGCCCTTATTCCAGTTATATCTAAGCGTGTAATTGGGTTAGGATCCAAGATTTTTCGCAGTATATCTTGGGCACCTGGGGAAAGCCATTTAGGAATACGAGCATCCCCCTTCAGAATCTTCTGATAAAGGACAACCGTATTTTGGTCATCAAATGGAAGATTCCCTGTAAGCATGACATATAGGATAACCCCACAAGACCATATGTCGGACAAAGAGCCATCATAACCTCTGTTGAGAAGGACCTCAGGGGCGATGTAGTTAGGGCTGCCACATGTGGTATGCAACAATCCATCTTTCCGTTGATTTTGTGGAAGGGCACTTAGTCCAAAATCCGAAACCTTTATGTTTCCTTTTGCATCAACTAGGACATTCTCCGGCTTAAGGTCCCTATGATAAACTCCCTTCTCATGGCAATAGCTTACAGCATCCATCAGCTGCTGGAAGAGTTTTCTTCCTTCCTTCTCTGACAACTTACCCTTTAATGCAATTTTGTCGAATAGCTCTCCTCCATTTACATATTCAAGAACCATGTATATCTTGGTTTTGCTAGCTGAAACCTCGTGGAGGCGGACGACATTGGGGTGCTTGAGCAGCTTCAACGTGGCGATCTCCCTCTTTATCTGTTCGTCGATCTTCATGGCGAGGATGCGTTGGCGGTCGAGGATCTTGATGGCGAAGGCGGCGCCGGTGTCGGCGTGGCGCGCCAGCTTCACCTTGCCGAAGTGCCCCTCTCCCAGCGCCCGCCCCATCTCGTACTTCCCCATCCGCATTGCCGGCGCCCGCCGCGGATGGGAGGGCCGCCGTCTCCGGCGCGCGCGCGCGCGGTGGCGGAGTTCGACACTCGCGAGAGGAGAGGAGAAGAGAAGGTTTGGTGGCGGCTTTGGGGGGAGTTGGAG]
[+] EMBL CB628591 [CAAAGGAACACAACATGAGGTAACTATTTATGTCCACTTAGATTGTCTACATCATACTTTTATACACTGTCAGTAGCCAATTTGCCCAGGAGGTAGCGATTTACCAGTAAAGGCAAAAAGAACACAAACTAATGAACTCCTAAAGGAAATACTTGGATGAGCGGTATACTCTTTTCGGTGTACAATTGGATTGTTTTGTATTTACAGTTTAATTTTACAAAACTGTGTCATACGTCGTTGTATTGGGGGCTCTTGTTAAAAATGCTAGAGCCTTCACAACTAAAAGCTAGAGAGACCCTTTTATCAAAAGCTACTGTTATATCGACAAAGGTCTTGTCTCATAGAATCTTTCTTCAAAAGCTGTTGCCTTTTGCATATGCCCAAGTCTTCTGAAAGTGACGCACATAGCTGTCTGTAAAGGGAACAATCCCCAGATGACCTTTTTAGCTCAACAACATAAAGAGATTCATTGATCTCAAACACCTCAGCAGAAATCAATAAATTTCCATGTCCTCTTGGATTTGCTGGTTCTTTACAAACTTGGATCACTTTTAGCTTGCCACTGTTCTTCTGTACCTGGAAACCCTTTTCTGTGACAGTGCTCTCAATCTTCTCAAATAGAGAAGTAGGGGAATAATTTGATACAAATCTGATTTTCCTTTCAGAAACATCTTCTTTCTCAAAAAATCCAGATAGATCAAGGCATGAGGACATCCCAATGAGCTGGAATGCATTGATTTGGCTGATTGCTGGGCTGGTTTCAAT ]
[-] EMBL AK107137 [ GAACACAAGATGAGGTAACTATTTATGTACACTTAGATTGTCTACATCATACTTTTATACACTGTCAGTAGCCAATTTGCCCAGGAGGTAGCGATTTACCAGTAAAGGCAAAAAGAACACAAACTAATGAACTCCTAAAGGAAATACTTGGATGATCGGTATACTCTTTTCGGTGTACAATTGGATTGTTTTGTATTTACAGTTTAATTTTACAAAACTGTGTCATACGTCGTTGTATTGGGGGCTCTTGTTAAAAATGCTAGAGCCTTCACAACTAAAAGCTAGAGAGACCCTTTTATCAAAAGCTACTGTTATATCGACAAAGGTCTTGTCTCATAGAATCTTTCTTCAAAAGCTGTTGCCTTTTGCATATGCCCAAGTCTTCAGAAAGTGACGCACATAGCTGTCTGTAAAGGGAACAATCCCCAGATGACCTTTTTAGCTCAACAACATAAAGAGATTCATTGATCTCAAACACCTCAGCAGAAATCAATAAATTTCCATGTCCTCTTGGATTTGCTGGTTCTTTACAAACTTGGATCACTTTTAGCTTGCCACTGTTCTTCTGTACCTGGAAACCCTTTTCTGTGACAGTGCTCTCAATCTTCTCAAATAGAGAAGTAGGGGAATAATTTGATACAAATCTGATTTTCCTTTCAGAAACATCTTCTTTCTCAAAAAATCCAGATAGATCAAGGCATGAGGACATCCCAATGAGCTGGAATGCATTGATTTGGCTGATTGCTGGGCTGGTTTCAATATCTTGATTCTCAGTCATATGTAGGTTGCCATCACTGATATTGTTGTCGTCATCATCATCGAAAGGCATAGCAGGAGTATAATCTTGCCTGAACCACTCATGTGCCCTTATTCCAGTTATATCTAAGCGTGTAATTGGGTTAGGATCCAAGATTTTTCGCAGTATATCTTGGGCACCTGGGGAAAGCCATTTAGGAATACGAGCATCCCCCTTCAGAATCTTCTGATAAAGGACAACCGTATTTTGGTCATCAAATGGAAGATTCCCTGTAAGCATAACATATAGGATAACCCCACAAGACCATATGTCGGACAAAGAGCCATCATAACCTCTGTTGAGAAGGACCTCAGGGGCGATGTAGTTAGGGCTGCCACATGTGGTATGCAACAATCCATCTTTCCGTTGATTTTGTGGAAGGGCACTTAGTCCAAAATCCGAAACCTTT TGTTTCCTTTTGCATCAACTAGGACATTCTCCGGCTTAAGGTCCCTATGATAAACTCCCTTCTCATGGCAATAGCTTACAGCATCCATCAGCTGCTGGAAGAGTTTTCTTCCTTCCTTCTCTGACAACTTACCCTTTAATGCAATTTTGTCGAATAGCTCTCCTCCATTTACATATTCAAGAACCATGTATATCTTGGTTTTGCTAGCTGAAACCTCGTGGAGGCGGACGACATTGGGGTGCTTGAGCAGCTTCAACGTGGCGATCTCCCTCTTTATCTGTTCGTCGATCTTCATGGCGAGGATGCGTTGGCGGTCGAGGATCTTGATGGCGAAGGCGGCGCCGGTGTCGGCGTGGCGCGCCAGCTTCACCTTGCCGAAGTGCCCCTCTCCCAGCGCCCGCCCCATCTCGTACTTCCCCATCCGCATTGCCGGCGCCCGCCGCGGATGGGAGGGCCGCCGTCTCCGGCGCGCGCGCGCGCGGTGGCGGAGTTCGACACTCGCGAGAGGAGAGGAGAAGAGAAGGTTTGGTGGCGGCTTTGGGGGGAGTTGGAG]
[+] EMBL CB660329 [ CAGGAGGTAGCGATTTACCAGTAAAGGCAAAAAGAACACAAACTAATGCACTCCTAAAGGAAATACTTGGATGATCGGTATACTCTTTTCGGTGTACAATTGGATTGTTTTGTATTTACAGTTTAATTTTACAAAACTGTGTCATACGTCGTTGTATTGGGGGCTCTTGTTAAAAATGCTAGAGCCTTCACAACTAAAAGCTAGAGAGACCCTTTTATCAAAAGCTACTGTTATATCGACAAAGGTCTTGTCTCATAGAATCTTTCTTCAAAAGCTGTTGCCTTTTGCATATGCCCAAGTCTTCAGAAAGTGACGCACATAGCTGTCTGTAAAGGGAACAATCCCCAGATGACCTTTTTAGCTCAACAACATAAAGAGATTCATTGATCTCAAACACCTCAGCAGAAATCAATAAATTTCCATGTCCTCTTGGATTTGCTGGTTCTTTACAAACTTGGATCACTTTTAGCTTGCCACTGTTCTTCTGTACCTGGAAACCCTTTTCTGTGACAGTGCTCTCAATCTTCTCAAATAGAGAAGTAGGGGAATAATTTGATACAAATCTGATTTTCCTTTCAGAAACATCTTCTTTCTCAAAAAATCCAGATAGATCAAGGCATGAGGACATCCCAATGAGCTGGAATGCATTGATTTGGCTGATTGCTGGGCTGGTTTC ]
[-] EMBL CB628590 [ GGTTGCCATCACTGATATTGTTGTCGTCATCATCATCGAAAGGCATAGCAGGAGTATAATCTTGCCTGAACCACTCATGTGCCCTTATTCCAGTTATATCTAAGCGTGTAATTGGGTTAGGATCCAAGATTTTTCGCAGTATATCTTGGGCACCTGGGGAAAGCCATTTAGGAATACGAGCATCCCCCTTCAGAATCTTCTGATAAAGGACAACCGTATTTTGGTCATCAAATGGAAGATTCCCTGTAAGCATGACATATAGGATAACACCACAAGACCATATGTCGGACAAAGAGCCATCATAACCTCTGTTGAGAAGGACCTCAGGGGCGATGTAGTTAGGGCTGCCACATGTGGTATGCAACAATCCATCTTTCCGTTGATTTTGTGGAAGGGCACTTAGTCCAAAATCCGAAACCTTTATGTTTCCTTTTGCATCAACTAGGACATTCTCCGGCTTAAGGTCCCTATGATAAACTCCCTTCTCATGGCAATAGCTTACAGCATCCATCAGCTGCTGGAAGAGTTTTCTTCCTTCCTTCTCTGACAACTTACCCTTTAATGCAATTTTGTCGAATAGCTCTCCTCCATTTACATATTCAAGAACCATGTATATCTTGGTTTTGCTAGCTGAAACCTCGTGGAGGCGGACGACATTGGGGTGCTTGAGCAGCTTCAACGTGGCGATCTCCCTCTTTATCTGTTCGTCGATCTTCATGGCGAGGATGCGTTGGCGGTCGAGGATCTTGATGGCGAAGGCGGCGCCGGTGTCGGCGTGGCGCGCCAGCTTCACCGTGCCG ]
[-] EMBL CB660328 [ CATAGCAGGAGTATAATCTTGCCTGAACCACTCATGTGCCCTTATTCCAGTTATATCTAAGCGTGTAATTGGGTTAGGATCCAAGATTTTTCGCAGTATATCTTGGGCACCTGGGGAAAGCCATTTAGGAATACGAGCATCCCCCTTCAGAATCTTCTGATAAAGGACAACCGTATTTTGGTCATCAAATGGAAGATTCCCTGTAAGCATGACATATAGGATAACCCCACAAGACCATATGTCGGACAAAGAGCCATCATAACCTCTGTTGAGAAGGACCTCAGGGGCGATGTAGTTAGGGCTGCCACATGTGGTATGCAACAATCCATCTTTCCGTTGATTTTGTGGAAGGGCACTTAGTCCAAAATCCGAAACCTTTATGTTTCC TTTGCATCAACTAGGACATTCTCCGGCTTAAGGTCCCTATGATAAACTCCCTTCTCATGGCAATAGCTTACAGCATCCATCAGCTGCTGGAAGAGTTTTCTTCCTTCCTTCTCTGACAACTTACCCTTTAATGCAATTTTGTCGAATAGCTCTCCTCCATTTACATATTCAAGAACCATGTATATCTTGGTTTTGCTAGCTGAAACCTCGTGGAGGCGGACGACATTGGGGTGCTTGAGCAGCTTCAACGTGGCGATCTCCCTCTTTATCTGTTCGTCGATCTTCATGGCGAGGATGCGTTGGCGGTCGAGGATCTTGATGGCGAAGGCGGCGCCGGTGTCGGCGTGGCGCGCCAGCTTCACCTAGGGGAAGTGCCCCTCTCCCAGCGCCCGCCCCATCT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8878#0 TACACCGCTTCGTGGAGAGCAACAGGATAGAGCTGGACTTGAAGCTTGGCACTGCTCTGA 60
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 TCGACATGTATGCCAAGTGTGGTGACATTGAGAGTGCACAGAGAGTGTTCGACAGAATGC 120
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 CAGAGAAGGATGTGCAAACTTGGAGTTCAATGATTATCGGACTGGCCAATCACGGGCTTG 180
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 GCCATGAGTCGCTCAGCTTGTTCTCGAAGATGATATCTGAAGGGATGAAACCGAATGGGG 240
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 TCACCTTCGTCGGTGTTCTTATCGCGTGTACTCATGTTGGCCTTGTGAGCGAAGGCAAGA 300
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 AGTATTTTAGATCAATGAATGAAGTTCATGGTATAGAGCCAACAGTTGAGCACTATGGAT 360
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 GTATGGTTGATCTTCTGGGGCGTTCAGGCCATGTTGAGGAGGCAAGACAACTCATCAGGA 420
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 GCATGACATTCGAACCCGACACAATTATCTGGAGAGCACTACTTGGGGCCTGTCGCATCC 480
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 ATAAGAATGTGGAGATTGCAGAGGAAGCCATGGCCAAACTGCGAGTTCTGGATCCTCTTG 540
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 GTGATGGACACTATGTGCTATTGTCAAATATATATGCACAGGCAAACTCTTGGGAAGGTG 600
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 TTGCAGAAATGAGGAAGACGATTAGAAGGGACAATATTCAGAGGATTCCTGGAAGAAGTT 660
consensus_8878#1 --------------------------------------------------CAAAGGAACA 10
*** *
consensus_8878#0 CAATTGAATGGGATGAAAAGATTCATGAGTTTGTCTCTGGTGATAGATTGCATCCAAGGT 720
consensus_8878#1 CAAC---ATGAGGTAACTATTTATGTCCACTTAGAT-TGTCTACATCATACTTTTATACA 66
*** *** * * * * * * ** * ** * * * * * *
consensus_8878#0 CCAAGGAGATCTACAGAGTGTTGGAAGAGATGATGGATCGGTTAAAACAAGCAGGTTATA 780
consensus_8878#1 CTGTCAGTAGCCAATTTGCCCAGGAGGTAGCGATTTACCAGTAAAGGCAAAAAGAACACA 126
* * * * * *** * *** * * ** ** *** ** * *
consensus_8878#0 AGCCTATGACAGGTTTGGTATTGCAAGATATTGATGAGCAATCTAAGGAACGCTCCTTGG 840
consensus_8878#1 AACTAATGA-------ACTCCTAAAGGAAATACTTGGATGATC---GGTATACTCTTTT- 175
* * **** * * * ** ** ** *** ** * *** **
consensus_8878#0 CTGAACATAGTGAGAAGCTGGCCATTGCTTTTGCGCTGCTAACTACCCCTGCGAGGTCAA 900
consensus_8878#1 CGGTGTACAATTGGA---TTGTT-TTGTATTTACAGTTTAATTTTACAAAACTGTGTCAT 231
* * * * * ** * * *** *** * * * * * * ****
consensus_8878#0 CTATTCGAATAACGAAGAATCTTAGAGCTTGTGAAGATTGCCATTCAGCTATGAAGTTGA 960
consensus_8878#1 ACGTCGTTGTATTGGGGGCTCTTGTTAAAAATGCTAGAGCCTTCACAACTAAAAGCTAGA 291
* ** * * **** ** * ** *** * * **
consensus_8878#0 TCTCCTTGGTGTATGATCGCAAGTTGGTTGTTAGAGACCGGAACCGTTTCCATCATTTCA 1020
consensus_8878#1 GAGACCC----TTTTATCAAAAGCTA-CTGTTATA--TCGACAAAGGTCTTGTC---TCA 341
* * * *** *** * ***** * ** * * * ** ***
consensus_8878#0 GTGAAGGGCAGTGCTCATGCAAGGATTACTGGTGAACTTAACATGCTTTTACCAAAACAA 1080
consensus_8878#1 TAGAA------TCTTTCTTCAAAAG---CTGTTGCCTTT----TGCATATGCCCAAGTCT 388
*** * * * *** *** ** ** *** * * ** **
consensus_8878#0 GACACAAACTTACACATTCAACACATAACTTCAAAGGAACACAAGATGAGGGAATCAGGT 1140
consensus_8878#1 T-CAGAAAGTGACGCACATAGC---TGTCTGTAAAGGGA-ACAATCCCCAGATGACCTTT 443
** *** * ** ** * * * ** ***** * **** * * *
consensus_8878#0 TTGGACGGATAGGGGGAAGGTTTTCACTGGAGGAATTTAGCCCCAGCTAATTCTTGATGT 1200
consensus_8878#1 TTAGCTCAACAACATAAAGAGATTCATTGATCTCAAACA-CCTCAGCAGAAA-TCAATAA 501
** * * * *** **** ** * * ** **** * * **
consensus_8878#0 CAATTGCATCTCCTACAGAAACAA--GGTTTAATGAACAATCGGGAGGCAGAGATCTGAT 1258
consensus_8878#1 -ATTTCCATGTCCTCTTGGATTTGCTGGTTCTTTACAAACTTGGATCACTTTTAGCTTGC 560
* ** *** **** * * **** * * * * ** * * **
consensus_8878#0 CAACAGCCGCAACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTACTAAATCATTGGGCAG 1318
consensus_8878#1 CA-CTGTTCTTCTGTACCTGGAAACCCTTTTCTGTGACAGTGCTCTCAATCTTCTCA-AA 618
** * * * ** * * *** * * * ** **** * *
consensus_8878#0 TACCAAATCATTGGGCAGTCACACTGGTGCGCATATGTTTTTGCTTTAGAGTCAGGAGCT 1378
consensus_8878#1 TAGAGAAGTA--GGGGAATAAT-TTGATACAAATCTGATTTTCCTTTCAGA--AACATCT 673
** ** * *** * * * ** * * ** ** **** **** * * **
consensus_8878#0 CCATTTTCTAATCTTCCGCTTGCAAGAAGTAAGCCTCTCACGGACATTTATCCACTAATG 1438
consensus_8878#1 TCTTTCTCAAAAAATCCAGATAGATCAAGGCA------TGAGGACATC---CCAATGA-G 723
* ** ** ** *** * * *** * ****** *** * * *
consensus_8878#0 CAATCATTCGGTGAACCTAACACTTACAAAAATGGACTGAAAGTTGCCTAAAAGTGACTA 1498
consensus_8878#1 CTGGAATGCATTGATTTGGCTGATTGCTGGGCTGGTTTCAATAT--CTTGATTCTCAGTC 781
* ** * *** ** * *** * ** * * * * * * *
consensus_8878#0 GTAAA-AGATCGCTCTGATTATTGGGTGATGTCGGCCAACCTCGTCAGAAAGCTCTTTTG 1557
consensus_8878#1 ATATGTAGGTTGCCATCACTGATAT-TGTTGTCG-TCATCATCATCGAAAGGCA----TA 835
** ** * ** * * * * ** ***** ** * ** ** ** ** *
consensus_8878#0 GTGGCTTCTGGATTGGGTCTTAACCAGGCAGGCTTCAGAGCATGTAGAGCAACGACGGCC 1617
consensus_8878#1 GCAGGAGTATAATCTTGCCTGAACCA------CT------CATGTGCCCTTATTCCAGTT 883
* * ** * ** ***** ** ***** * * *
consensus_8878#0 ATCGGATCATCAGATTGTACGGCTCAGATGGCACATGAACCTTGCTCCTAATAGCCACAT 1677
consensus_8878#1 AT------ATCTAAGCGTGTAATTGGGTTAGGATCCAAGATTT-TTCGCAGTA-TATCTT 935
** *** * ** * * * * * * ** ** * ** * *
consensus_8878#0 GATCTCATCAGCAAGTATCCCAATGCTCCAGTGGGCGATTCTCCGTGATGAGATTCGCAG 1737
consensus_8878#1 GGGCACCTGGGGAAA------GCCATTTAGGAATACGAGCATCCCCCTTCAGAATCTTCT 989
* * * * * ** * * *** *** * *** **
consensus_8878#0 GGTTTGACGTGACAACCCAAGTTTGTTTTTGCTGCAGGGGAATCTGATAAACCCAAGTCT 1797
consensus_8878#1 GAT---AAAGGACAACCGTATTTTGGTCAT-----------------CAAATGGAAGATT 1029
* * * ******* * **** * * *** *** *
consensus_8878#0 GCACGGGCGCATCATCACCCGACTAAAATACTCCGAGAAGCAAGAGCGCAGTAAAAGGAA 1857
consensus_8878#1 CCCTGTAAGCATGA-----CATATAGGATAACCCCA----CAAGACCATATGTCGGACAA 1080
* * **** * * ** *** ** * ***** * * **
consensus_8878#0 AGGGAAATAATATTGCTTGCTGAAACTGAAAGACCCTTTGCCTTGTCCTACTACTTCCAT 1917
consensus_8878#1 AGAGCCATCATAACCTCTGTTGA----GAAGGACCTCAGGGGCGATGTAGTTA------- 1129
** * ** *** ** *** *** **** * * **
consensus_8878#0 GAGCAGGAAAAAAACATATTGGGTGGTCATTTCGTGTGCTCAATTGTTTATGCAGATGTC 1977
consensus_8878#1 GGGCTGCCACATGTGGTATGCAACAATCCATCTTTCCG-TTGATTTTGTGGAAGGGCACT 1188
* ** * * * *** ** * * * * *** * * *
consensus_8878#0 CAGGTCAAGAAACAGTAAAAAGGACAATTATTCTACTGCACACAAGGGGGAGAGTTATCC 2037
consensus_8878#1 TAGTCCAAAATCCG---AAACCTTTATGTTTCCTTTTGCAT-CAACTAGGACA-TTCTCC 1243
** *** * * *** * * * ** **** *** *** * ** ***
consensus_8878#0 AAAGAGAGGT-------ATTAGCAGCCAAGTTAAAAAAAAAATTAGTGCTATATCGCAGC 2090
consensus_8878#1 GGCTTAAGGTCCCTATGATAAACTCCCTTCTCATGGCAATAGCTTACAGCATCCATCAGC 1303
**** ** * * ** * * ** * * ** ****
consensus_8878#0 CGG-AGAGGAGTTCAGACGGCAACATCAATGGCGCAAGAGGCGTTGAACAGCAAGAGGAA 2149
consensus_8878#1 TGCTGGAAGAGTTTTCTTCCTTCCTTCTCTGACA-ACTTACCCTTTAATGCAATTTTGTC 1362
* ** ***** * ** ** * * * ** ** * *
consensus_8878#0 GAAAGCAAGAGAGTAAAAAAAACACAAAAGAAAGGATTTCTGCTGAAACTCTGTGGGTTG 2209
consensus_8878#1 GAATAGCTCTCCTCCATTTACATATTCAAGAACC-ATGTATATCTTGGTTTTGCTAGCTG 1421
*** * * * * ***** ** * * * ** * **
consensus_8878#0 CGAAGCTCACCTCGTGGAGGCGGACGACATTGGGGTGCTTGAGCAGCTTCAACGTGGCGA 2269
consensus_8878#1 AA------ACCTCGTGGAGGCGGACGACATTGGGGTGCTTGAGCAGCTTCAACGTGGCGA 1475
****************************************************
consensus_8878#0 TCTCCCTCTTTATCTGAGCAAGAAATTAATTAACCAGCCGGCCAAGCAAAGGAACAGGAA 2329
consensus_8878#1 TCTCCCTCTTTATCTG-------------------------------------------- 1491
****************
consensus_8878#0 CCCGGATGAGCAATCAATCAAGGTTAATTCACCTGTTCGTCGATCTTCATGGCGAGGATG 2389
consensus_8878#1 -----------------------------------TTCGTCGATCTTCATGGCGAGGATG 1516
*************************
consensus_8878#0 CGTTGGCGGTCGAGGATCTTGATGGCGAAGGCGGCGCCGGTGTCGGCGTGGCGCGCCAGC 2449
consensus_8878#1 CGTTGGCGGTCGAGGATCTTGATGGCGAAGGCGGCGCCGGTGTCGGCGTGGCGCGCCAGC 1576
************************************************************
consensus_8878#0 TTCACCTTGCCGAAGTGCCCCTCTCCCAGCGCCCGCCCCATCTCGTACTTCCCCATCCGC 2509
consensus_8878#1 TTCACCTTGCCGAAGTGCCCCTCTCCCAGCGCCCGCCCCATCTCGTACTTCCCCATCCGC 1636
************************************************************
consensus_8878#0 ATTGCCGGCGCCCGCCGCGGATGGGAGGGCCGCCGTCTCCGGCGCGCGCGCGCGCGGTGG 2569
consensus_8878#1 ATTGCCGGCGCCCGCCGCGGATGGGAGGGCCGCCGTCTCCGGCGCGCGCGCGCGCGGTGG 1696
************************************************************
consensus_8878#0 CGGAGTTCGACACTCGCGAGAGGAGAGGAGAAGAGAAGGTTTGGTGGCGGCTTTGGGGGG 2629
consensus_8878#1 CGGAGTTCGACACTCGCGAGAGGAGAGGAGAAGAGAAGGTTTGGTGGCGGCTTTGGGGGG 1756
************************************************************
consensus_8878#0 AGTTGGAGGAAGGGCGTGAGACTTTGGGAATTCGGCTGGGTTTTTATTGGGAGTTGCCGA 2689
consensus_8878#1 AGTTGGAG---------------------------------------------------- 1764
********
consensus_8878#0 ATGGCGACTCTTCCCGTTGCAGCCGCGACCGGGTCGGTGACCGGATTCATACTTGTCTTT 2749
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 TGCATTCCTTTCTCTTTTTTTTTTTGAAAGTTTTTTTTTTAATTTTTGTTGCTGTTGTGT 2809
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 AGGAGTATGTCTTTTGCTTTCGTATGCGTGTTTGAGCTGGATTTTTCACATTTTTGTCCT 2869
consensus_8878#1 ------------------------------------------------------------
consensus_8878#0 TTTAAAAAACTTATTTTGCAAATAGATCCATAGAAA 2905
consensus_8878#1 ------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||