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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8880#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2839 fasta sequence
[TCCCTCTCGCTCTCTGCTCTCGCACAGGCGACGGCGCGCGCGGCCGGCGACGGCGGCTCCCGGGTGGCGGCGCGCGGGTTCAGGGCGGCGCGCGGCTACGGCCATCATCACATCTCGACGACGCCGCCATCAGTCGCTGCCATCGGCGATGGCGGCACGCTGCAGTGGGCCATCCAAAACTTCATCCGCGCCAGTGACTACATCACGCTGTTGCACGTCTGCCCGCCAGCGAGGTTGCGCAGCCTACGCCTCGGCGGCTTCCAGCTCGCCCTCGCCTTCAGGGAGCTCTGCAACGGCATCGCGGAGGCGAAGGTGGAGATAGTGGTTAGGGAGGGGAAGGTCGGGGAGACGGTGGTGGTGACGGTGAACCAGCTCGCCGCCACCACGCTCGTCGTCGGTCTCCACGACAAGATTCCTCAACTGAACTGAACTATACTGTACCGAAGCTGGTCCTCCACCACGCCGTCGTCTGGCCTCCGCATTCTGCAGGCCAACAACCCCGGCCTCGTGCACCGGCATGGAGGGCCCTAGGGGCGGCGAGATCGACGATGGCCGCTGCCCACGACGAGGTCCCCTTGGAGGCGGTGGTGGTCGATTCCATTTTTTCCCACATCCAGGCAGGTGGCGCGGCGGAGGTGGCGGCGGGATCCGCCGGGAGGTCGCGGAGGTGGGACGCCGCGGACGAATGGAGCGGCGGCGCGGCGGGCGACCAGGACGATGGCCACTGCGCCACGGCGGGATCCAGCGGGGACGAGGGGGACGACGACACCGACGAGGAAGAGAGGATCCCGTCGGGAGGAGCGGGCGCTCGCGCCCAACTCCTCGCCCACTGTCGTTGCCTCCCATCTCTTCCCCCGGCGGCAGCCGCCCGCGCCCAGCTATTCCCCCTTTGGCCACCGCCCGTGCCCAGCTCCTCGGTCGTTGTCGCCGACGCCCATCTCTTCCCCCGCCGCCCATGCGCGCGCGGCTGTGCTCAATTGACCAAGCCTTCCTCCCTCGGCGGCCGCCGACACGCCCGCCTCACCGGCCATCCCCCGCCAGCCGCCGGTGCGCGGCACTCCTCCCCTGTCGCTGTGAGTGAGAGAGAGAGAGAGGAGGATGAAGAGAGAGAGAGAGGAGGGGAAAGAGATAGAGGGCGCTGACGTGGCATCCTGACACGTGGGGCTCACGTGGGTCCCATGCTGACTCAGCCATCACATCGGATAAATGAGTGAACGGTTTTGTAAGTTGATAGATGTTATATATCTGATTTTGTGGTTGGGGGATGATTTTGTAATTCGATGACAGGTTGAGGGACCTTGGGTGTACTTTTTCCTCTCCCGGAATCAACTCGCCGCCCATTTCCTCGATTTACCGCCTTGTCTCATACTCTCATCTCATGGGGCAGGTAGGGTTTACTGCCCGGCGATCATCTCCGCCGCCGCCTCCGTCGCCGTCGCCGGCGACCGAGGCGAGGGCCTGCGGTAGCGACCCAACCCAGCCGCCGCCGCCGGCGAAACGCCGGAGGACAACACGCCGCGTCGTCGGCATCGACTCCCTCGGCGAGGACCTCCTCCTGGACATCCTCCTCCGCCTCCCCACCCTCGCCTCGCTCGTCCGCGCCGCGCTCACCTGCAGGGCGTAGCGCGCCGCGGTGGCCTCCTCCCCGTCCTTCCGCCGCCGCTTCAGGGACCTCCACCCGCCGCCCTTCCTCGGCGCCTTCGGCGACCCCGACGGCCACGACGGCCTCCCGGTCTTCCTCCCCGCGCGGCGCACCCGCGACCGGGACCGCGGCGGCGACTTCCTCCTCACCTGCCTCCAGGACCCCGACCACGACGCGCCCCTCCGCTGGCGCGTCGCCGACTGCCGGGACGGCTACCTCCTCCTCTTCAACTCCGACGCAGGATTGGTCGCCACCGCCAACCCCATGGCCCCGCGGATGACGGATCTCATCAAAACGCCCTTCCGGATCAACAATTCGGCCAGCAATGGCGCCATCCAAGACGAATCCTTGCCAATCTCCCTCGACGTGCACCTGATTTCCTCGGAAGAGGATCCCATGTCATTCCAACTGGTCTGGCTTTGCCACGACGAGTTCAGGGTTCAGGTGTCCGTCTTCTCGAACGACACAAGGGATTGGTGCTTTCTCCCATGGGTGGACATCGAGGAGAGGGTTTCTTCGCCGGATGTGCCACAAGATGGCACCAAATACTGGCTTATGTCCGGGATGCAAGCCAATGGCCTCATATTCTGGCCCTTCCAGAATGGGAAGCACATGCTGGTGCTGGACACTGGCACCATGGAGTTCTCCGTGTATGAGTTCCCAATATACTCTAAGCTCGTGCAAGGTTGTAGC-TTCGGTGTCGGCGAGACCAAAGACGGCATCCCTTGCATTGCTTATGTCAATGGAGCCACCATTGTTGTGTTGATCCGCAGATTCGACAAGAAGCAGGGTGTTCAGGGGTGGAGGTTTGTCGACGGCGTCAATTGCGACGACGAGGCGGACCAACTGGGTATTAATGGTGGGCTTGATGTGGTGGCCATAAAGGATGGCTTTGTGTACCTGGCCGCGACAGGGATGATCCTTTCGCTCTGCTTAGAAACAAGGAAGCTTGAGAAGCTGTTTCCAATGAGTTTCCAGTTCCCTCTCCATCCCTACATCATGGCGTGGCCTCCTACTTTGGTAGGAAACTATGGGAGCTTTGCAGAGATCCAAGATGATATTAGCAATGTTTAACTGCTAGCTAGGTTAAGGTGGCAAATTTAATCTTTATTAATTGTTGCGGGAACATTGTTTTATTCAATTCTCTAATCAGGGGATCAACATTTTGGTGATATTATGCAAAAAAGAAAAAAATCT]
[+] EMBL AK099765 [TCCCTCTCGCTCTCTGCTCTCGCACAGGCGACGGCGCGCGCGGCCGGCGACGGCGGCTCCCGGGTGGCGGCGCGCGGGTTCAGGGCGGCGCGCGGCTACGGCCATCATCACATCTCGACGACGCCGCCATCAGTCGCTGCCATCGGCGATGGCGGCACGCTGCAGTGGGCCATCCAAAACTTCATCCGCGCCAGTGACTACATCACGCTGTTGCACGTCTGCCCGCCAGCGAGGTTGCGCAGCCTACGCCTCGGCGGCTTCCAGCTCGCCCTCGCCTTCAGGGAGCTCTGCAACGGCATCGCGGAGGCGAAGGTGGAGATAGTGGTTAGGGAGGGGAAGGTCGGGGAGACGGTGGTGGTGACGGTGAACCAGCTCGCCGCCACCACGCTCGTCGTCGGTCTCCACGACAAGATTCCTCAACTGAACTGAACTATACTGTACCGAAGCTGGTCCTCCACCACGCCGTCGTCTGGCCTCCGCATTCTGCAGGCCAACAACCCCGGCCTCGTGCACCGGCATGGAGGGCCCTAGGGGCGGCGAGATCGACGATGGCCGCTGCCCACGACGAGGTCCCCTTGGAGGCGGTGGTGGTCGATTCCATTTTTTCCCACATCCAGGCAGGTGGCGCGGCGGAGGTGGCGGCGGGATCCGCCGGGAGGTCGCGGAGGTGGGACGCCGCGGACGAATGGAGCGGCGGCGCGGCGGGCGACCAGGACGATGGCCACTGCGCCACGGCGGGATCCAGCGGGGACGAGGGGGACGACGACACCGACGAGGAAGAGAGGATCCCGTCGGGAGGAGCGGGCGCTCGCGCCCAACTCCTCGCCCACTGTCGTTGCCTCCCATCTCTTCCCCCGGCGGCAGCCGCCCGCGCCCAGCTATTCCCCCTTTGGCCACCGCCCGTGCCCAGCTCCTCGGTCGTTGTCGCCGACGCCCATCTCTTCCCCCGCCGCCCATGCGCGCGCGGCTGTGCTCAATTGACCAAGCCTTCCTCCCTCGGCGGCCGCCGACACGCCCGCCTCACCGGCCATCCCCCGCCAGCCGCCGGTGCGCGGCACTCCTCCCCTGTCGCTGTGAGTGAGAGAGAGAGAGAGGAGGATGAAGAGAGAGAGAGAGGAGGGGAAAGAGATAGAGGGCGCTGACGTGGCATCCTGACACGTGGGGCTCACGTGGGTCCCATGCTGACTCAGCCATCACATCGGATAAATGAGTGAACGGTTTTGTAAGTTGATAGATGTTATATATCTGATTTTGTGGTTGGGGGATGATTTTGTAATTCGATGACAGGTTGAGGGACCTTGGGTGTACTTTTTCCTCTCCCGGAATCAACTCGCCGCCCATTTCCTCGATTTACCGCCTTGTCTCATACTCTCATCTCATGGGGCAGGTAGGGTTTACTGCCCGGCGATCATCTCCGCCGCCGCCTCCGTCGCCGTCGCCGGCGACCGAGGCGAGGGCCTGCGGTAGCGACCCAACCCAGCCGCCGCCGCCGGCGAAACGCCGGAGGACAACACGCCGCGTCGTCGGCATCGACTCCCTCGGCGAGGACCTCCTCCTGGACATCCTCCTCCGCCTCCCCACCCTCGCCTCGCTCGTCCGCGCCGCGCTCACCTGCAGGGCGTAGCGCGCCGCGGTGGCCTCCTCCCCGTCCTTCCGCCGCCGCTTCAGGGACCTCCACCCGCCGCCCTTCCTCGGCGCCTTCGGCGACCCCGACGGCCACGACGGCCTCCCGGTCTTCCTCCCCGCGCGGCGCACCCGCGACCGGGACCGCGGCGGCGACTTCCTCCTCACCTGCCTCCAGGACCCCGACCACGACGCGCCCCTCCGCTGGCGCGTCGCCGACTGCCGGGACGGCTACCTCCTCCTCTTCAACTCCGACGCAGGATTGGTCGCCACCGCCAACCCCATGGCCCCGCGGATGACGGATCTCATCAAAACGCCCTTCCGGATCAACAATTCGGCCAGCAATGGCGCCATCCAAGACGAATCCTTGCCAATCTCCCTCGACGTGCACCTGATTTCCTCGGAAGAGGATCCCATGTCATTCCAACTGGTCTGGCTTTGCCACGACGAGTTCAGGGTTCAGGTGTCCGTCTTCTCGAACGACACAAGGGATTGGTGCTTTCTCCCATGGGTGGACATCGAGGAGAGGGTTTCTTCGCCGGATGTGCCACAAGATGGCACCAAATACTGGCTTATGTCCGGGATGCAAGCCAATGGCCTCATATTCTGGCCCTTCCAGAATGGGAAGCACATGCTGGTGCTGGACACTGGCACCATGGAGTTCTCCGTGTATGAGTTCCCAATATACTCTAAGCTCGTGCAAGGTTGTAGC TTCGGTGTCGGCGAGACCAAAGACGGCATCCCTTGCATTGCTTATGTCAATGGAGCCACCATTGTTGTGTTGATCCGCAGATTCGACAAGAAGCAGGGTGTTCAGGGGTGGAGGTTTGTCGACGGCGTCAATTGCGACGACGAGGCGGACCAACTGGGTATTAATGGTGGGCTTGATGTGGTGGCCATAAAGGATGGCTTTGTGTACCTGGCCGCGACAGGGATGATCCTTTCGCTCTGCTTAGAAACAAGGAAGCTTGAGAAGCTGTTTCCAATGAGTTTCCAGTTCCCTCTCCATCCCTACATCATGGCGTGGCCTCCTACTTTGGTAGGAAACTATGGGAGCTTTGCAGAGATCCAAGATGATATTAGCAATGTTTAACTGCTAGCTAGGTTAAGGTGGCAAATTTAATCTTTATTAATTGTTGCGGGAACATTGTTTTATTCAATTCTCTAATCAGGGGATCAACATTTTGGTGATATTATGCAAAAAAGAAAAAAATCT]
[+] EMBL CF322731 [ TCACCTGCCTCCAGGACCCCGACCACGACGCGCCCCTCCGCTGGCGCGTCGCCGACTGCCGGGACGGCTACCTCCTCCTCTTCAACTCCGACGCAGGATTGGTCGCCACCGTCAACCCCATGGCCCCGCGGATGACGGATCTCATCAAAACGCCCTTCCGGATCAACAATTCGGCCAGCAATGGCGCCATCCAAGACGAATCCTTGCCAATCTCCCTCGACGTGCACCTGATTTCCTCGGAAGAGGATCCCATGTCATTCCAACTGGTCTGGCTTTGCCACGACGAGTTCAGGGTTCAGGTGTCCGTCTTCTCGAACGACACAAGGGATTGGTGCTTTCTCCCATGGGTGGACATC AGGAGAGGGTTTCTTCGCCGGATGTGCCACAAGATGGCACCAAATACTGGCTTATGTCCGGGATGCAAGCCAATGGCCTCATATTCTGGCCCTTCCAGAATGGGAAGCACATGCTGGTGCTGGACACTGGCACCATGGAGTTCTCCGTGTATGAGTTCCCAATATACTCTAAGCTCGTGCAAGGTTGTAGCTTTCGGTGTCGGCGAGACCAAAGACGGCATCCCTTGCATTGCTTAT ]
consensusID : consensus_8880#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1523 fasta sequence
[TAGGCAGTCCCGGTCCGTTCGTGTTCCACGCACTGTGGGCACTGTGAATGTGTGACTAAATGGGCCGAGCCCAACTACTATAGCTAAGTCGCGCTGTCCATCTCACCATCTCCCGGAAGGCAAAAAGTACACCGAAGGTCCCTCAACTTGTCACCGAGTTACAAAATCGTCCCCCAACCATAAAACCGATACAACACATCCCCTAACTTGTTTTGACCCGGTTTTGTCTCACGTGACGGCTGAGTCAGCGTGAGACCCACGTGGACCCCACATGGCAGGGTGTCCCTGTCAGCTCCTGCTCTCTTTCCTCTCTTCTCTTTTTTTTTTTTCTCTTCTCCTTTCCTCCCTCTCGCTCTCTGCTCTCGCACAGGCGACGGCGCGCGCGGCCGGCGACGGCGGCTCCCGGGTGGCGGCGCGCGGGTTCAGGGCGGCGCGCGGCTACGGCCATCATCACATCTCGACGACGCCGCCATCAGTCGCTGCCATCGGCGATGGCGGCACGCTGCAGTGGGCCATCCAAAACTTCATCCGCGCCAGTGACTACATCACGCTGTTGCACGTCTGCCCGCCAGCGAGGTTGCGCAGCCTACGCCTCGGCGGCTTCCAGCTCGCCCTCGCCTTCAGGGAGCTCTGCAACGGCATCGCGGAGGTAAACCCATCAATCAATGGTGGTAGTTGGCTCAACTCAAAACAAAGAAAGAAGCAAATCATCTTTTTAATTGTGAAATGGTATGCAGGCGAAGGTGGAGATAGTGGTTAGGGAGGGGAAGGTCGGGGAGACGGTGGTGGTGACGGTGAACCAGCTCGCCGCCACCACGCTCGTCGTCGGTCTCCACGACAAGATTCCTCAACTGAACTGAACTATACTGTACCGAAGCTGGTCCTCCACCACGCCGTCGTCTGGCCTCCGCATTCTGCAGGCCAACAACCCCGGCCTCGTGCACCGGCATGGAGGGCCCTAGGGGCGGCGAGATCGACGATGGCCGCTGCCCACGACGAGGTCCCCTTGGAGGCGGTGGTGGTCGATTCCATTTTTTCCCACATCCAGGCAGGTGGCGCGGCGGAGGTGGCGGCGGGATCCGCCGGGAGGTCGCGGAGGTGGGACGCCGCGGACGAATGGAGCGGCGGCGCGGCGGGCGACCAGGACGATGGCCACTGCGCCACGGCGGGATCCAGCGGGGACGAGGGGGACGACGACACCGACGAGGAAGAGAGGATCCCGTCGGGAGGAGCGGGCGCTCGCGCCCAACTCCTCGCCCACTGTCGTTGCCTCCCATCTCTTCCCCCGGCGGCAGCCGCCCGCGCCCAGCTATTCCCCCTTTGGCCACCGCCCGTGCCCAGCTCCTCGGTCGTTGTCGCCGACGCCCATCTCTTCCCCCGCCGCCCATGCGCGCGCGGCTGTGCTCAATTGACCAAGCCTTCCTCCCTCGGCGGCCGCCGACACGCCCGCCTCACCGGCCATCCCCCGCCAGCCGCCGGTGCGCGGCACTCCTCCCCTGTCGCTGTGAGTGAGAGAGAGAGAG]
[+] EMBL CB673973 [TAGGCAGTCCCGGTCCGTTCGTGTTCCACGCACTGTGGGCACTGTGAATGTGTGACTAAATGGGCCGAGCCCAACTACTATAGCTAAGTCGCGCTGTCCATCTCACCATCTCCCGGAAGGCAAAAAGTACACCGAAGGTCCCTCAACTTGTCACCGAGTTACAAAATCGTCCCCCAACCATAAAACCGATACAACACATCCCCTAACTTGTTTTGACCCGGTTTTGTCTCACGTGACGGCTGAGTCAGCGTGAGACCCACGTGGACCCCACATGGCAGGGTGTCCCTGTCAGCTCCTGCTCTCTTTCCTCTCTTCTCTTTTTTTTTTTTCTCTTCTCCTTTCCTCCCTCTCGCTCTCTGCTCTCGCACAGGCGACGGCGCGCGCGGCCGGCGACGGCGGCTCCCGGGTGGCGGCGCGCGGGTTCAGGGCGGCGCGCGGCTACGGCCATCATCACATCTCGACGACGCCGCCATCAGTCGCTGCCATCGGCGATGGCGGCACGCTGCAGTGGGCCATCCAAAACTTCATCCGCGCCAGTGACTACATCACGCTGTTGCACGTCTGCCCGCCAGCGAGGTTGCGCAGCCTACGCCTCGGCGGCTTCCAGCTCGCCCTCGCCTTCAGGGAGCTCTGCAACGGCATCGCGGAGGTAAACCCATCAATCAATGGTGGTAGTTGGCTCAACTCAAAACAAAGAAAGAAGCAAATCATCTTTTTAATTGTGAAATGGTATGCAGGCGAAGGTGGAGATAGTGG ]
[-] EMBL AK109130 [ GTCACCGAGTTACAAAATCGTCCCCCAACCATAAAACCGATACAACACATCCCCTAACTTGTTTTGACCCGGTTTTGTCTCACGTGACGGCTGAGTCAGCGTGAGACCCACGTGGACCCCACATGGCAGGGTGTCCCTGTCAGCTCCTGCTCTCTTTCCTCTCTTCTCTTTTTTTTTTTTCTCTTCTCCTTTCCTCCCTCTCGCTCTCTGCTCTCGCACAGGCGACGCCGCGCGCGGCCGGCGACGGCGGCTCCCGGGTGGCGGCGCGCGGGTTCAGGGCGGCGCGCGGCTACGGCCATCATCACATCTCGACGACGCCGCCATCAGTCGCTGCCATCGGCGATGGCGGCACGCTGCAGTGGGCCATCCAAAACTTCATCCGCGCCAGTGACTACATCACGCTGTTGCACGTCTGCCCGCCAGCGAGGTTGCGCAGCCTACGCCTCGGCGGCTTCCAGCTCGCCCTCGCCTTCAGGGAGCTCTGCAACGGCATCGCGGAGGTAAACCCATCAATCAATGGTGGTAGTTGGCTCAACTCAAAACAAAGAAAGAAGCAAATCATCTTTTTAATTGTGAAATGGTATGCAGGCGAAGGTGGAGATAGTGGTTAGGGAGGGGAAGGTCGGGGAGACGGTGGTGGTGACGGTGAACCAGCTCGCCGCCACCACGCTCGTCGTCGGTCTCCACGACAAGATTCCTCAACTGAACTGAACTATACTGTACCGAAGCTGGTCCTCCACCACGCCGTCGTCTGGCCTCCGCATTCTGCAGGCCAACAACCCCGGCCTCGTGCACCGGCATGGAGGGCACTAGGGGCGGCGAGATCGACGATGGCCGCTGCCCACGACGAGGTCCCCTTGGAGGCGGTGGTGGTCGATTCCATTTTTTCCCACATCCAGACAGGTGGCGCGGCGGAGGTGGCGGCGGGATCCGCCGGGAGGTCGCGGAGGTGGGACGCCGCGGACGAATGGAGCGGCGGCGCGGCGGGCGACCAGGACGATGGCCACTGCGCCACGGCGGGATCCAGCGGGGACGAGGGGGACGACGACACCGACGAGGAAGAGAGGATCCCGTCGGGAGGAGCGGGCGCTCGCGCCCAACTCCTCGCCCACTGTCGTTGCCTCCCATCTCTTCCCCCGGCGGCAGCCGCCCGCGCCCAGCTATTCCCCCTTTGGCCACCGCCCGTGCCCAGCTCCTCGGTCGTTGTCGCCGACGCCCATCTCTTCCCCCGCCGCCCATGCGCGCGCGGCTGTGCTCAATTGACCAAGCCTTCCTCCCTCGGCGGCCGCCGACACGCCCGCCTCACCGGCCATCCCCCGCCAGCCGCCGGTGCGCGGCACTCCTCCCCTGTCGCTGTGAGT ]
[-] EMBL AK067145 [ CCGAGTTACAAAATCGTCCCCCAACCATAAAACCGATACAACACATCCCCTAACTTGTTTTGACCCGGTTTTGTCTCACGTGACGGCTGAGTCAGCGTGAGACCCACGTGGACCCCACATGGCAGGGTGTCCCTGTCAGCTCCTGCTCTCTTTCCTCTCTTCTCTTTTTTTTTTTTCTCTTCTCCTTTCCTCCCTCTCGCTCTCTGCTCTCGCACAGGCGACGGCGCGCGCGGCCGGCGACGGCGGCTCCCGGGTGGCGGCGCGCGGGTTCAGGGCGGCGCGCGGCTACGGCCATCATCACATCTCGACGACGCCGCCATCAGTCGCTGCCATCGGCGATGGCGGCACGCTGCAGTGGGCCATCCAAAACTTCATCCGCGCCAGTGACTACATCACGCTGTTGCACGTCTGCCCGCCAGCGAGGTTGCGCAGCCTACGCCTCGGCGGCTTCCAGCTCGCCCTCGCCTTCAGGGAGCTCTGCAACGGCATCGCGGAGGTAAACCCATCAATCAATGGTGGTAGTTGGCTCAACTCAAAACAAAGAAAGAAGCAAATCATCTTTTTAATTGTGAAATGGTATGCAGGCGAAGGTGGAGATAGTGGTTAGGGAGGGGAAGGTCGGGGAGACGGTGGTGGTGACGGTGAACCAGCTCGCCGCCACCACGCTCGTCGTCGGTCTCCACGACAAGATTCCTCAACTGAACTGAACTATACTGTACCGAAGCTGGTCCTCCACCACGCCGTCGTCTGGCCTCCGCATTCTGCAGGCCAACAACCCCGGCCTCGTGCACCGGCATGGAGGGCCCTAGGGGCGGCGAGATCGACGATGGCCGCTGCCCACGACGAGGTCCCCTTGGAGGCGGTGGTGGTCGATTCCATTTTTTCCCACATCCAGGCAGGTGGCGCGGCGGAGGTGGCGGCGGGATCCGCCGGGAGGTCGCGGAGGTGGGACGCCGCGGACGAATGGAGCGGCGGCGCGGCGGGCGACCAGGACGATGGCCACTGCGCCACGGCGGGATCCAGCGGGGACGAGGGGGACGACGACACCGACGAGGAAGAGAGGATCCCGTCGGGAGGAGCGGGCGCTCGCGCCCAACTCCTCGCCCACTGTCGTTGCCTCCCATCTCTTCCCCCGGCGGCAGCCGCCCGCGCCCAGCTATTCCCCCTTTGGCCACCGCCCGTGCCCAGCTCCTCGGTCGTTGTCGCCGACGCCCATCTCTTCCCCCGCCGCCCATGCGCGCGCGGCTGTGCTCAATTGACCAAGCCTTCCTCCCTCGGCGGCCGCCGACACGCCCGCCTCACCGGCCATCCCCCGCCAGCCGCCGGTGCGCGGCACTCCTCCCCTGTCGCTGTGAGTGAGAGAGAGAGAG]
[-] EMBL CB673972 [ AATCATCTTTTTAATTGTGAAATGGTATGCAGGCGAAGGTGGAGATAGTGGTTAGGGAGGGGAAGGTCGGGGAGACGGTGGTGGTGACGGTGAACCAGCTCGCCGCCACCACGCTCGTCGTCGGTCTCCACGACAAGATTCCTCAACTGAACTGAACTATACTGTACCGAAGCTGGTCCTCCACCACGCCGTCGTCTGGCCTCCGCATTCTGCAGGCCAACAACCCCGGCCTCGTGCACCGGCATGGAGGGCCCTAGGGGCGGCGAGATCGACGATGGCCGCTGCCCACGACGAGGTCCCCTTGGAGGCGGTGGTGGTCGATTCCATTTTTTCCCACATCCAGGCAGGTGGCGCGGCGGAGGTGGCGGCGGGATCCGCCGGGAGGTCGCGGAGGTGGGACGCCGCGGACGAATGGAGCGGCGGCGCGGCGGGCGACCAGGACGATGGCCACTGCGCCACGGCGGGATCCAGCGGGGACGAGGGGGACGACGACACCGACGAGGAAGAGAGGATCCCGTCGGGAGGAGCGGGCGCTCGCGCCCAACTCCTCGCCCACTGTCGTTGCCTCCCATCTCTTCCCCCGGCGGCAGCCGCCCGCGCCCAGCTATTCCCCCTTTGGCCACCGCCCGTGCCCAGCTCCTCGGTCGTTGTCGCCGACGCCCATCTCTTCCCCCGCCGCCCATGCGCGCGCGGCTGTGCTCAATTGACCAAGCCTTCCTCCCTCGGCGGCCGCCGACACGCCCGCCTCACCGGCCATCCC ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8880#0 ------------------------------------------------------------
consensus_8880#1 TAGGCAGTCCCGGTCCGTTCGTGTTCCACGCACTGTGGGCACTGTGAATGTGTGACTAAA 60
consensus_8880#0 ------------------------------------------------------------
consensus_8880#1 TGGGCCGAGCCCAACTACTATAGCTAAGTCGCGCTGTCCATCTCACCATCTCCCGGAAGG 120
consensus_8880#0 ------------------------------------------------------------
consensus_8880#1 CAAAAAGTACACCGAAGGTCCCTCAACTTGTCACCGAGTTACAAAATCGTCCCCCAACCA 180
consensus_8880#0 ------------------------------------------------------------
consensus_8880#1 TAAAACCGATACAACACATCCCCTAACTTGTTTTGACCCGGTTTTGTCTCACGTGACGGC 240
consensus_8880#0 ------------------------------------------------------------
consensus_8880#1 TGAGTCAGCGTGAGACCCACGTGGACCCCACATGGCAGGGTGTCCCTGTCAGCTCCTGCT 300
consensus_8880#0 -------------------------------------------TCCCTCTCGCTCTCTGC 17
consensus_8880#1 CTCTTTCCTCTCTTCTCTTTTTTTTTTTTCTCTTCTCCTTTCCTCCCTCTCGCTCTCTGC 360
*****************
consensus_8880#0 TCTCGCACAGGCGACGGCGCGCGCGGCCGGCGACGGCGGCTCCCGGGTGGCGGCGCGCGG 77
consensus_8880#1 TCTCGCACAGGCGACGGCGCGCGCGGCCGGCGACGGCGGCTCCCGGGTGGCGGCGCGCGG 420
************************************************************
consensus_8880#0 GTTCAGGGCGGCGCGCGGCTACGGCCATCATCACATCTCGACGACGCCGCCATCAGTCGC 137
consensus_8880#1 GTTCAGGGCGGCGCGCGGCTACGGCCATCATCACATCTCGACGACGCCGCCATCAGTCGC 480
************************************************************
consensus_8880#0 TGCCATCGGCGATGGCGGCACGCTGCAGTGGGCCATCCAAAACTTCATCCGCGCCAGTGA 197
consensus_8880#1 TGCCATCGGCGATGGCGGCACGCTGCAGTGGGCCATCCAAAACTTCATCCGCGCCAGTGA 540
************************************************************
consensus_8880#0 CTACATCACGCTGTTGCACGTCTGCCCGCCAGCGAGGTTGCGCAGCCTACGCCTCGGCGG 257
consensus_8880#1 CTACATCACGCTGTTGCACGTCTGCCCGCCAGCGAGGTTGCGCAGCCTACGCCTCGGCGG 600
************************************************************
consensus_8880#0 CTTCCAGCTCGCCCTCGCCTTCAGGGAGCTCTGCAACGGCATCGCGGAGG---------- 307
consensus_8880#1 CTTCCAGCTCGCCCTCGCCTTCAGGGAGCTCTGCAACGGCATCGCGGAGGTAAACCCATC 660
**************************************************
consensus_8880#0 ------------------------------------------------------------
consensus_8880#1 AATCAATGGTGGTAGTTGGCTCAACTCAAAACAAAGAAAGAAGCAAATCATCTTTTTAAT 720
consensus_8880#0 ------------------CGAAGGTGGAGATAGTGGTTAGGGAGGGGAAGGTCGGGGAGA 349
consensus_8880#1 TGTGAAATGGTATGCAGGCGAAGGTGGAGATAGTGGTTAGGGAGGGGAAGGTCGGGGAGA 780
******************************************
consensus_8880#0 CGGTGGTGGTGACGGTGAACCAGCTCGCCGCCACCACGCTCGTCGTCGGTCTCCACGACA 409
consensus_8880#1 CGGTGGTGGTGACGGTGAACCAGCTCGCCGCCACCACGCTCGTCGTCGGTCTCCACGACA 840
************************************************************
consensus_8880#0 AGATTCCTCAACTGAACTGAACTATACTGTACCGAAGCTGGTCCTCCACCACGCCGTCGT 469
consensus_8880#1 AGATTCCTCAACTGAACTGAACTATACTGTACCGAAGCTGGTCCTCCACCACGCCGTCGT 900
************************************************************
consensus_8880#0 CTGGCCTCCGCATTCTGCAGGCCAACAACCCCGGCCTCGTGCACCGGCATGGAGGGCCCT 529
consensus_8880#1 CTGGCCTCCGCATTCTGCAGGCCAACAACCCCGGCCTCGTGCACCGGCATGGAGGGCCCT 960
************************************************************
consensus_8880#0 AGGGGCGGCGAGATCGACGATGGCCGCTGCCCACGACGAGGTCCCCTTGGAGGCGGTGGT 589
consensus_8880#1 AGGGGCGGCGAGATCGACGATGGCCGCTGCCCACGACGAGGTCCCCTTGGAGGCGGTGGT 1020
************************************************************
consensus_8880#0 GGTCGATTCCATTTTTTCCCACATCCAGGCAGGTGGCGCGGCGGAGGTGGCGGCGGGATC 649
consensus_8880#1 GGTCGATTCCATTTTTTCCCACATCCAGGCAGGTGGCGCGGCGGAGGTGGCGGCGGGATC 1080
************************************************************
consensus_8880#0 CGCCGGGAGGTCGCGGAGGTGGGACGCCGCGGACGAATGGAGCGGCGGCGCGGCGGGCGA 709
consensus_8880#1 CGCCGGGAGGTCGCGGAGGTGGGACGCCGCGGACGAATGGAGCGGCGGCGCGGCGGGCGA 1140
************************************************************
consensus_8880#0 CCAGGACGATGGCCACTGCGCCACGGCGGGATCCAGCGGGGACGAGGGGGACGACGACAC 769
consensus_8880#1 CCAGGACGATGGCCACTGCGCCACGGCGGGATCCAGCGGGGACGAGGGGGACGACGACAC 1200
************************************************************
consensus_8880#0 CGACGAGGAAGAGAGGATCCCGTCGGGAGGAGCGGGCGCTCGCGCCCAACTCCTCGCCCA 829
consensus_8880#1 CGACGAGGAAGAGAGGATCCCGTCGGGAGGAGCGGGCGCTCGCGCCCAACTCCTCGCCCA 1260
************************************************************
consensus_8880#0 CTGTCGTTGCCTCCCATCTCTTCCCCCGGCGGCAGCCGCCCGCGCCCAGCTATTCCCCCT 889
consensus_8880#1 CTGTCGTTGCCTCCCATCTCTTCCCCCGGCGGCAGCCGCCCGCGCCCAGCTATTCCCCCT 1320
************************************************************
consensus_8880#0 TTGGCCACCGCCCGTGCCCAGCTCCTCGGTCGTTGTCGCCGACGCCCATCTCTTCCCCCG 949
consensus_8880#1 TTGGCCACCGCCCGTGCCCAGCTCCTCGGTCGTTGTCGCCGACGCCCATCTCTTCCCCCG 1380
************************************************************
consensus_8880#0 CCGCCCATGCGCGCGCGGCTGTGCTCAATTGACCAAGCCTTCCTCCCTCGGCGGCCGCCG 1009
consensus_8880#1 CCGCCCATGCGCGCGCGGCTGTGCTCAATTGACCAAGCCTTCCTCCCTCGGCGGCCGCCG 1440
************************************************************
consensus_8880#0 ACACGCCCGCCTCACCGGCCATCCCCCGCCAGCCGCCGGTGCGCGGCACTCCTCCCCTGT 1069
consensus_8880#1 ACACGCCCGCCTCACCGGCCATCCCCCGCCAGCCGCCGGTGCGCGGCACTCCTCCCCTGT 1500
************************************************************
consensus_8880#0 CGCTGTGAGTGAGAGAGAGAGAGAGGAGGATGAAGAGAGAGAGAGAGGAGGGGAAAGAGA 1129
consensus_8880#1 CGCTGTGAGTGAGAGAGAGAGAG------------------------------------- 1523
***********************
consensus_8880#0 TAGAGGGCGCTGACGTGGCATCCTGACACGTGGGGCTCACGTGGGTCCCATGCTGACTCA 1189
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 GCCATCACATCGGATAAATGAGTGAACGGTTTTGTAAGTTGATAGATGTTATATATCTGA 1249
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 TTTTGTGGTTGGGGGATGATTTTGTAATTCGATGACAGGTTGAGGGACCTTGGGTGTACT 1309
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 TTTTCCTCTCCCGGAATCAACTCGCCGCCCATTTCCTCGATTTACCGCCTTGTCTCATAC 1369
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 TCTCATCTCATGGGGCAGGTAGGGTTTACTGCCCGGCGATCATCTCCGCCGCCGCCTCCG 1429
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 TCGCCGTCGCCGGCGACCGAGGCGAGGGCCTGCGGTAGCGACCCAACCCAGCCGCCGCCG 1489
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 CCGGCGAAACGCCGGAGGACAACACGCCGCGTCGTCGGCATCGACTCCCTCGGCGAGGAC 1549
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 CTCCTCCTGGACATCCTCCTCCGCCTCCCCACCCTCGCCTCGCTCGTCCGCGCCGCGCTC 1609
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 ACCTGCAGGGCGTAGCGCGCCGCGGTGGCCTCCTCCCCGTCCTTCCGCCGCCGCTTCAGG 1669
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 GACCTCCACCCGCCGCCCTTCCTCGGCGCCTTCGGCGACCCCGACGGCCACGACGGCCTC 1729
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 CCGGTCTTCCTCCCCGCGCGGCGCACCCGCGACCGGGACCGCGGCGGCGACTTCCTCCTC 1789
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 ACCTGCCTCCAGGACCCCGACCACGACGCGCCCCTCCGCTGGCGCGTCGCCGACTGCCGG 1849
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 GACGGCTACCTCCTCCTCTTCAACTCCGACGCAGGATTGGTCGCCACCGCCAACCCCATG 1909
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 GCCCCGCGGATGACGGATCTCATCAAAACGCCCTTCCGGATCAACAATTCGGCCAGCAAT 1969
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 GGCGCCATCCAAGACGAATCCTTGCCAATCTCCCTCGACGTGCACCTGATTTCCTCGGAA 2029
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 GAGGATCCCATGTCATTCCAACTGGTCTGGCTTTGCCACGACGAGTTCAGGGTTCAGGTG 2089
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 TCCGTCTTCTCGAACGACACAAGGGATTGGTGCTTTCTCCCATGGGTGGACATCGAGGAG 2149
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 AGGGTTTCTTCGCCGGATGTGCCACAAGATGGCACCAAATACTGGCTTATGTCCGGGATG 2209
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 CAAGCCAATGGCCTCATATTCTGGCCCTTCCAGAATGGGAAGCACATGCTGGTGCTGGAC 2269
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 ACTGGCACCATGGAGTTCTCCGTGTATGAGTTCCCAATATACTCTAAGCTCGTGCAAGGT 2329
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 TGTAGCTTCGGTGTCGGCGAGACCAAAGACGGCATCCCTTGCATTGCTTATGTCAATGGA 2389
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 GCCACCATTGTTGTGTTGATCCGCAGATTCGACAAGAAGCAGGGTGTTCAGGGGTGGAGG 2449
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 TTTGTCGACGGCGTCAATTGCGACGACGAGGCGGACCAACTGGGTATTAATGGTGGGCTT 2509
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 GATGTGGTGGCCATAAAGGATGGCTTTGTGTACCTGGCCGCGACAGGGATGATCCTTTCG 2569
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 CTCTGCTTAGAAACAAGGAAGCTTGAGAAGCTGTTTCCAATGAGTTTCCAGTTCCCTCTC 2629
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 CATCCCTACATCATGGCGTGGCCTCCTACTTTGGTAGGAAACTATGGGAGCTTTGCAGAG 2689
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 ATCCAAGATGATATTAGCAATGTTTAACTGCTAGCTAGGTTAAGGTGGCAAATTTAATCT 2749
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 TTATTAATTGTTGCGGGAACATTGTTTTATTCAATTCTCTAATCAGGGGATCAACATTTT 2809
consensus_8880#1 ------------------------------------------------------------
consensus_8880#0 GGTGATATTATGCAAAAAAGAAAAAAATCT 2839
consensus_8880#1 ------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||