These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8883#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3703 fasta sequence [GACACTTCCCAAAACCCCAAACCGCCCATATCTCTCTCCTCTTCTCCGCTCCTCGCTTCCCCCAAAACCCTCGCGGTGGCGGTGGGCCGCCGGTCTCATTCCGCCGGCGTCCACGGAGGCGGCCGGAGCCAGGCGCTCCGCGGGCCGGGGAGCCACCGGAAGGCTGGAACCCTAGCGGCGGCGGGTCTCCTCCCCCTCCCCGCGCGCCGGGCGGCGCCATGGCCATTCAGCGGCTGCTCGCGAGCTCGCTCGTGGCCGCCACGCCGCGGTGGCTTCCCGTCGCCGCCGACTCGTTTCTCCGGCGCCGCCACCGCCCTCGCTGCTCCCCGCTCCCCGCGCTGCTATTTAACAGGAGGTCCTGGTCTAAACCAAGGAAAGTCTCACGAAGCATTTCCATTGTGTCTAGGAAGATGAACAAACAAGGAGATCTCTGTAATGAAGGCATGCTGCCACATATTCTGTGGTGGAAAGAGAAAATGGAGAGGTGCAGGAAACCATCATCAATGCAATTGACTCAGAGACTTGTGTATTCAAATATTTTAGGATTGGATCCAACTTTAAGAAATGGAAGCTTGAAGGATGGAAGCCTGAACACGGAAATGTTGCAATTCAAATCGAAGTTTCCTCGTGAAGTTCTACTTTGCAGAGTGGGAGATTTCTACGAGGCTGTTGGGTTTGATGCATGTATCCTTGTGGAGCATGCAGGCTTAAATCCTTTTGGAGGCTTGCGTTCTGATAGTATTCCAAAAGCTGGATGTCCAGTCATGAATTTGCGGCAGACATTGGATGATTTGACTCGATGTGGTTACTCTGTGTGCATAGTTGAAGAAATTCAAGGCCCAACCCAAGCTCGTGCTAGGAAAGGCCGATTTATTTCTGGCCATGCACATCCTGGTAGTCCTTATGTATTTGGTCTTGCTGAAGTAGACCATGATGTTGAGTTCCCTGATCCAATGCCTGTAGTTGGGATTTCACGATCTGCAAAAGGCTATTGCCTGATTTCTGTGCTAGAGACAATGAAAACATATTCAGCTGAGGAGGGCTTAACAGAGGAAGCAGTTGTTACTAAGCTTCGCATATGCCGTTATCATCATCTATACCTTCATAGTTCTTTGAGGAACAATTCTTCAGGCACATCACGCTGGGGAGAATTTGGCGAAGGTGGGCTATTGTGGGGAGAGTGCAGTGGAAAATCTTTTGAGTGGTTTGATGGTAATCCTATTGAAGAACTGTTATGCAAGGTAAGGGAAATATATGGGCTTGAAGAGAAGACTGTTTTCCGTAATGTCAGTGTCTCATTGGAAGGGAGGCCTCAACCCTTGTATCTTGGAACAGCTACTCAAATTGGGGTGATACCAACTGAGGGAATACCCAGTTTGCTAAAAATTGTTCTCCCTCCAAACTTTGGTGGCCTTCCATCATTGTATATTAGAGATCTTCTTCTTAACCCTCCATCTTTTGATGTTGCATCATCAGTTCAAGAGGCTTGCAGGCTTATGGGTAGCATAACTTGCTCGATTCCTGAATTTACATGCATACCGGCAGCAAAGCTTGTGAAATTACTCGAGTCAAAAGAGGTTAATCACATCGAATTTTGTAGAATAAAGAATGTCCTCGATGAGGTGTTGTTCATGGGTAGCAATGCTGAGCTTTCTGCTATCCTGAATAAATTGCTTGATCCTGCCGCCATAGTTACTGGGTTCAAAGTTGAAGCCGATATACTAGTGAATGAATGTAGCTTTATTTCACAACGTATAGCTGAAGTAATCTCTTTAGGTGGTGAAAGTGACCAGGCAATAACTTCATCTGAATATATTCCGAAAGAGTTCTTCAATGGTATGGAGTCATCTTGGAAGGGACGTGTAAAAAGGGTGCATGCTGAAGAGGAGTTCTCAAATGTTGATATAGCTGCTGAGGCACTGTCAACAGCGGTCATTGAAGATTTTCTGCCAATTATTTCAAGAGTAAAATCTGTGATGTCCTCAAATGGAAGTTCGAAGGGAGAAATCAGTTATGCAAAAGAGCATGAATCTGTTTGGTTTAAAGGGAGGCGATTCACACCAAATGTGTGGGCCAACACTCCTGGTGAACTACAGATAAAGCAATTGAAGCCTGCAATTGACTCAAAAGGTAGAAAGGTCGGAGAAGAATGGTTCACCACTATCAAAGTTGAGAATGCTTTAACCAGGTACCATGAAGCTTGTGATAATGCAAAACGTAAAGTTCTTGAGTTGTTGAGAGGACTTTCAAGTGAATTGCAGGACAAGATTAATGTCCTTGTCTTTTGCTCAACGATGCTCATCATAACAAAAGCACTTTTTGGTCATGTTAGTGAAGGACGAAGAAGGGGTTGGGTGCTTCCTACTATATCTCCCTTGTGTAAGGATAATGTTACAGAGGAAATCTCAAGTGAAATGGAATTGTCAGGAACTTTTCCTTACTGGCTTGATACTAACCAAGGGAATGCAATACTGAATGATGTCCATATGCACTCTTTGTTTATTCTTACTGGTCCAAACGGTGGTGGTAAATCCAGTATGCTGAGATCAGTCTGTGCTGCTGCATTACTTGGAATATGTGGCCTGATGGTGCCAGCTGCTTCAGCTGTCATCCCACATTTCGATTCCATCATGCTGCATATGAAAGCATATGATAGCCCAGCTGATGGTAAAAGTTCGTTTCAGATTGAAATGTCAGAGATACGATCTTTAGTCTGCCGAGCTACAGCTAGGAGTCTTGTTCTAATTGATGAAATATGTAGGGGCACAGAAACAGCAAAAGGAACATGTATAGCTGGTAGCATCATTGAAAGACTCGATAATGTTGGCTGCATAGGCATCATATCAACTCATTTGCATGGCATTTTTGACCTTCCACTGTCACTCCACAATACTGATTTCAAAGCTAT-GGG-AA-CCGAAATCATCGATA-GGTGCA-TTCAG-CCAACATGGGAAATTAAT-GGATGGCA-TCT-GTAGAGAGAGTC-TTGC-TTTTCAAACAG-CCAGGAAAG-AAGGTATGCCT-GA-CTTGAT-AATT-ANAAGAGCTGAGG-AACTA-TATTT-GGCTATGAGCACAAAC-AGCAA-G-CAGACAT-CA-TCAGC-TG-TCCACCATG-AAANATT-CCATAGNCCACCTC-TACT-G-AAAANAGCTT-GGTT-G-AGAA-GCCTAATTA-CCTGGGAAAAGGACTAGAGCTTCAATCTGGTTCCTTCGGATTACTAAGAAAAGAAATTGAGAGTGTTGTTACCACAATATGCAAGAAGAAACTGTTGGATCTCTACAACAAAAGGAGCATCTCAGAACTGATTGAGGTGGTCTGTGTTGCTGTGGGTGCTAGGGAGCAACCCCCACCTTCAACTGTTGGCAGGTCCAGCATTTATGTAATTATCAGACGTGACAGCAAGCTCTATATTGGACAGACGGATGATCTTGTGGGTCGACTTAGTGCTCACAGATCGAAGGAAGGTATGCAGGATGCCACGATATTATATATTTTGGTACCTGGGAAGAGCATTGCATGCCAACTGGAAACTCTTCTCATAAATCAGCTACCTTTGAAAGGTTTCAAGCTCATCAACAAGGCAGATGGCAAGCATCGAAATTTCGGTATATCTCTTGTCCCAGGAGAGGCAATTGCCGCATAGAGCACACTGAGCATACCCACTGAAAATCTGATGTACTACTAACTCTTTATAATATGCAATCTAATCGAACTCTAGGAGAGTAA] [+] EMBL AK067042 [GACACTTCCCAAAACCCCAAACCGCCCATATCTCTCTCCTCTTCTCCGCTCCTCGCTTCCCCCAAAACCCTCGCGGTGGCGGTGGGCCGCCGGTCTCATTCCGCCGGCGTCCACGGAGGCGGCCGGAGCCAGGCGCTCCGCGGGCCGGGGAGCCACCGGAAGGCTGGAACCCTAGCGGCGGCGGGTCTCCTCCCCCTCCCCGCGCGCCGGGCGGCGCCATGGCCATTCAGCGGCTGCTCGCGAGCTCGCTCGTGGCCGCCACGCCGCGGTGGCTTCCCGTCGCCGCCGACTCGTTTCTCCGGCGCCGCCACCGCCCTCGCTGCTCCCCGCTCCCCGCGCTGCTATTTAACAGGAGGTCCTGGTCTAAACCAAGGAAAGTCTCACGAAGCATTTCCATTGTGTCTAGGAAGATGAACAAACAAGGAGATCTCTGTAATGAAGGCATGCTGCCACATATTCTGTGGTGGAAAGAGAAAATGGAGAGGTGCAGGAAACCATCATCAATGCAATTGACTCAGAGACTTGTGTATTCAAATATTTTAGGATTGGATCCAACTTTAAGAAATGGAAGCTTGAAGGATGGAAGCCTGAACACGGAAATGTTGCAATTCAAATCGAAGTTTCCTCGTGAAGTTCTACTTTGCAGAGTGGGAGATTTCTACGAGGCTGTTGGGTTTGATGCATGTATCCTTGTGGAGCATGCAGGCTTAAATCCTTTTGGAGGCTTGCGTTCTGATAGTATTCCAAAAGCTGGATGTCCAGTCATGAATTTGCGGCAGACATTGGATGATTTGACTCGATGTGGTTACTCTGTGTGCATAGTTGAAGAAATTCAAGGCCCAACCCAAGCTCGTGCTAGGAAAGGCCGATTTATTTCTGGCCATGCACATCCTGGTAGTCCTTATGTATTTGGTCTTGCTGAAGTAGACCATGATGTTGAGTTCCCTGATCCAATGCCTGTAGTTGGGATTTCACGATCTGCAAAAGGCTATTGCCTGATTTCTGTGCTAGAGACAATGAAAACATATTCAGCTGAGGAGGGCTTAACAGAGGAAGCAGTTGTTACTAAGCTTCGCATATGCCGTTATCATCATCTATACCTTCATAGTTCTTTGAGGAACAATTCTTCAGGCACATCACGCTGGGGAGAATTTGGCGAAGGTGGGCTATTGTGGGGAGAGTGCAGTGGAAAATCTTTTGAGTGGTTTGATGGTAATCCTATTGAAGAACTGTTATGCAAGGTAAGGGAAATATATGGGCTTGAAGAGAAGACTGTTTTCCGTAATGTCAGTGTCTCATTGGAAGGGAGGCCTCAACCCTTGTATCTTGGAACAGCTACTCAAATTGGGGTGATACCAACTGAGGGAATACCCAGTTTGCTAAAAATTGTTCTCCCTCCAAACTTTGGTGGCCTTCCATCATTGTATATTAGAGATCTTCTTCTTAACCCTCCATCTTTTGATGTTGCATCATCAGTTCAAGAGGCTTGCAGGCTTATGGGTAGCATAACTTGCTCGATTCCTGAATTTACATGCATACCGGCAGCAAAGCTTGTGAAATTACTCGAGTCAAAAGAGGTTAATCACATCGAATTTTGTAGAATAAAGAATGTCCTCGATGAGGTGTTGTTCATGGGTAGCAATGCTGAGCTTTCTGCTATCCTGAATAAATTGCTTGATCCTGCCGCCATAGTTACTGGGTTCAAAGTTGAAGCCGATATACTAGTGAATGAATGTAGCTTTATTTCACAACGTATAGCTGAAGTAATCTCTTTAGGTGGTGAAAGTGACCAGGCAATAACTTCATCTGAATATATTCCGAAAGAGTTCTTCAATGGTATGGAGTCATCTTGGAAGGGACGTGTAAAAAGGGTGCATGCTGAAGAGGAGTTCTCAAATGTTGATATAGCTGCTGAGGCACTGTCAACAGCGGTCATTGAAGATTTTCTGCCAATTATTTCAAGAGTAAAATCTGTGATGTCCTCAAATGGAAGTTCGAAGGGAGAAATCAGTTATGCAAAAGAGCATGAATCTGTTTGGTTTAAAGGGAGGCGATTCACACCAAATGTGTGGGCCAACACTCCTGGTGAACTACAGATAAAGCAATTGAAGCCTGCAATTGACTCAAAAGGTAGAAAGGTCGGAGAAGAATGGTTCACCACTATCAAAGTTGAGAATGCTTTAACCAGGTACCATGAAGCTTGTGATAATGCAAAACGTAAAGTTCTTGAGTTGTTGAGAGGACTTTCAAGTGAATTGCAGGACAAGATTAATGTCCTTGTCTTTTGCTCAACGATGCTCATCATAACAAAAGCACTTTTTGGTCATGTTAGTGAAGGACGAAGAAGGGGTTGGGTGCTTCCTACTATATCTCCCTTGTGTAAGGATAATGTTACAGAGGAAATCTCAAGTGAAATGGAATTGTCAGGAACTTTTCCTTACTGGCTTGATACTAACCAAGGGAATGCAATACTGAATGATGTCCATATGCACTCTTTGTTTATTCTTACTGGTCCAAACGGTGGTGGTAAATCCAGTATGCTGAGATCAGTCTGTGCTGCTGCATTACTTGGAATATGTGGCCTGATGGTGCCAGCTGCTTCAGCTGTCATCCCACATTTCGATTCCATCATGCTGCATATGAAAGCATATGATAGCCCAGCTGATGGTAAAAGTTCGTTTCAGATTGAAATGTCAGAGATACGATCTTTAGTCTGCCGAGCTACAGCTAGGAGTCTTGTTCTAATTGATGAAATATGTAGGGGCACAGAAACAGCAAAAGGAACATGTATAGCTGGTAGCATCATTGAAAGACTCGATAATGTTGGCTGCATAGGCATCATATCAACTCATTTGCATGGCATTTTTGACCTTCCACTGTCACTCCACAATACTGATTTCAAAGCTAT GGG AA CCGAAATCATCGATA GGTGCA TTCAG CCAACAT GGAAATTAAT GGATGGCA TCT GTAGAGAGAGTC TTGC TTTTCAAACAG CCAGGAAAG AAGGTATGCCT GA CTTGAT AATT AGAAGAGCTGAGG AACTA TATTT GGCTATGAGCACAAAC AGCAA G CATACAT CA TCAGC TG TCCACCATG AAATA T CCATAG CCAACTC TACT G TAAATAGCTT GGTT G AGAA GCCTAATTA CCTGAGAAATGGACTAGAGCTTCAATCTGGTTCCTTCGGATTACTAAGAAAAGAAATTGAGAGTGTTGTTACCACAATATGCAAGAAGAAACTGTTGGATCTCTACAACAAAAGGAGCATCTCAGAACTGATTGAGGTGGTCTGTGTTGCTGTGGGTGCTAGGGAGCAACCCCCACCTTCAACTGTTGGCAGGTCCAGCATTTATGTAATTATCAGACGTGACAGCAAGCTCTATATTGGACAGACGGATGATCTTGTGGGTCGACTTAGTGCTCACAGATCGAAGGAAGGTATGCAGGATGCCACGATATTATATATTTTGGTACCTGGGAAGAGCATTGCATGCCAACTGGAAACTCTTCTCATAAATCAGCTACCTTTGAAAGGTTTCAAGCTCATCAACAAGGCAGATGGCAAGCATCGAAATTTCGGTATATCTCTTGTCCCAGGAGAGGCAATTGCCGCATAGAGCACACTGAGCATACCCACTGAAAATCTGATGTACTACTAACTCTTTATAATATGCAATCTAATCGAACTCTAGGAGAGTAA] [+] EMBL CB096710 [ ATGCTCATCATAACAAAAGCACTTTTTGGTCATGTTAGTGAAGGACGAAGAAGGGGTTGGGTGCTTCCTACTATATCTCCCTTGTGTAAGGATAATGTTACAGAGGAAATCTCAAGTGAAATGGAATTGTCAGGAACTTTTCCTTACTGGCTTGATACTAACCAAGGGAATGCAATACTGAATGATGTCCATATGCACTCTTTGTTTATTCTTACTGGTCCAAACGGTGGTGGTAAATCCAGTATGCTGAGATCAGTCTGTGCTGCTGCATTACTTGGAATATGTGGCCTGATGGTGCCAGCTGCTTCAGCTGTCATCCCACATTTCGATTCCATCATGCTGCATATGAAAGCATATGATAGCCCAGCTGATGGTAAAAGTTCGTTTCAGATTGAAATGTCAGAGATACGATCTTTAGTCTGCCGAGCTACAGCTAGGAGTCTTGTTCTAATTGATGAAATATGTAGGGGCACAGAAACAGCAAAAGGAACATGTATAGCTGGTAGCATCATTGAAAGACTCGATAATGTTGGCTGCATAGGCATCATATCAACTCATTTGCATGGCATTTTTGACCTTTCACTGTCACTCCACAATACTGATTTCAAAGCTATGGGG AACCCGAAATCATCGATAGGGTGCATTTCAG CCAACATGGGAAATTAATGGGATGGCATTCTGGTAGAGAGAGTCTTTGCTTTTTCAAACAGCCCAGGAAAGAAAGGTATGCCTGGN CTTGATAAATT ANAANACCTGAGGNACCTATTNTTT GGCTNTGAGCCCAAACNGGNAAGG CAGCCAT NATTNAGCTTG TCCNCCATG NAANATTCCCNTAGNCCACCTCTTCCT GNAAAANAGCTTGGGTTGG ANAANACCNAAATACCCTGGNAAAA ] [+] EMBL CA765022 [ TTCCTACTATATCTCCCTTGTGTAAGGATAATGTTACAGAGGAAATCTCAAGTGAAATGGAATTGTCAGGAACTTTTCCTTACTGGCTTGATACTAACCAAGGGAATGCAATACTGAATGATGTCCATATGCACTCTTTGTTTATTCTTACTGGTCCAAACGGTGGTGGTGAATCCAGTATGCTGAGATCAGTCTGTGCTGCTGCATTACTTGGAATATGTGGCCTGATGGTGCCAGCTGCTTCAGCTGTCATCCCACATTTCGATTCCATCATGCTGCATATGAAAGCATATGATAGCCCAGCTGATGGTAAAAGTCCGTTTCAGATTGAAATGTCAGAGATACGATCTTTAGTCTGCCGAGCTACAGCTAGGAGTCTTGTTCTAATTGATGAAATATGTAGGGGCACAGAAACAGCAAAAGGAACATGTATAGCTGGTAGCATCATTGAAAGACTCGATAATGTTGGCTGCATAGGCATCATATCAACTCATTTGCATGGCATTTTTGACCTTCCACTGTCACTCCACAATACTGATTTCAAAGCTAT GGGAAA CCGAAATCATCGATA GGTGCA TTCAGCCCAACATGGGAAATTAAT GGATGGCA TCT GTAGAGAGAGTC TTGC TTTTCAAACAG CCAGGAAAG AANGTATGCCT GACCTTGAT AATTAANAAGAGCTGANG AACTA TATTTGGGCTATGAGCNCAACC AGCAA GCCAGACATCCA TCAGC TGNCCCACCTTGNAAANATC CCATAGNCCACCTC TACTGG NAAANAGCTT GGTT GAAGGN GCCTAATTA CCTGGGNAAAngg ] consensusID : consensus_8883#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 497 fasta sequence [TTGTAGCAAACTGGCAAAAGCGCCAATAGAGTTGGATTCAATTCTTTTTCAATTTATATATAATTCTGGGAACTTCATGTTTCTCAAAATGAAAATTTTATAGATAATCAACTGGCTAGTTCTTTTCTTTAAAGGCCTCATGCCCTCATCAATCTGTAGTGTGACTGACTTGTTTTTTTAGCCACTGACATCAATCTTGGGTATTAGGCCTGAATATTTCTATGTTATGCATTTTAAACTTATTCTGGAAATTATTGATGAAATGTTTCTAATTGAATTTAGCTAGTAGCCTGTTACTTATATTTGTTGGACAATTTAGTCAATTTAATGTGCTTATGATGTTCCTGTTTTGGTAAATATGCACAATATTCTGGTTTCATGCATTTTTTTTATTGGGGTTTTGAGCAGTGAAGGACGAAGAAGGGGTTGGGTGCTTCCTACTATATCTCCCTTGTGTAAGGATAATGTTACAGAGGAAATCTCAAGTGAAATGGAAT] [+] EMBL CF307476 [TTGTAGCAAACTGGCAAAAGCGCCAATAGAGTTGGATTCAATTCTTTTTCAATTTATATATAATTCTGGGAACTTCATGTTTCTCAAAATGAAAATTTTATAGATAATCAACTGGCTAGTTCTTTTCTTTAAAGGCCTCATGCCCTCATCAATCTGTAGTGTGACTGACTTGTTTTTTTAGCCACTGACATCAATCTTGGGTATTAGGCCTGAATATTTCTATGTTATGCATTTTAAACTTATTCTGGAAATTATTGATGAAATGTTTCTAATTGAATTTAGCTAGTAGCCTGTTACTTATATTTGTTGGACAATTTAGTCAATTTAATGTGCTTATGATGTTCCTGTTTTGGTAAATATGCACAATATTCTGGTTTCATGCATTTTTTTTATTGGGGTTTTGAGCAGTGAAGGACGAAGAAGGGGTTGGGTGCTTCCTACTATATCTCCCTTGTGTAAGGATAATGTTACAGAGGAAATCTCAAGTGAAATGGAAT] consensusID : consensus_8883#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 326 fasta sequence [CCGTCTGTGCTGCTGCATTACTTGGAATATGTGGCCTGATGGTGCCAGCTGCTTCAGCTGTCATCCCACATTTCGATTCCCTCATGCTGCATATGAAAGCATATGATAGCCCAGCTGATGGTAAAAGTTCGTTTCAGGTGCCAATTTATAGCTTTTTCATTTTTTAAATATAATTTGTGTACTACATTCGCAGGTTGACACTCGGTGTTATTAGTTATTACCATATGTTATGTTAGTTTATTTCATGATGGGATTTAACCTGCTAAAATTGTATTGATACAGCTATTGCTGTTGTAAACTAATTGTCTTACTAGCTATCTTTTTAC] [+] EMBL CB097119 [CCGTCTGTGCTGCTGCATTACTTGGAATATGTGGCCTGATGGTGCCAGCTGCTTCAGCTGTCATCCCACATTTCGATTCCCTCATGCTGCATATGAAAGCATATGATAGCCCAGCTGATGGTAAAAGTTCGTTTCAGGTGCCAATTTATAGCTTTTTCATTTTTTAAATATAATTTGTGTACTACATTCGCAGGTTGACACTCGGTGTTATTAGTTATTACCATATGTTATGTTAGTTTATTTCATGATGGGATTTAACCTGCTAAAATTGTATTGATACAGCTATTGCTGTTGTAAACTAATTGTCTTACTAGCTATCTTTTTAC] consensusID : consensus_8883#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 272 fasta sequence [CGATCACACCAAATGTGTGGGCCAACACTCCTGGTGAACTACAGATAAAGCAATTGAAGCTCAATTGACTCAAAGGTAGAAGGCGAGAGATGGTCACACTATCAAAGTGAGATTTTTACAGGACATGAGTGTATATCAACGAAGTTGGTGTGGGACTTCAGGATCGACAGTATGTCTTCTTTTCACATTCCATCAACCTTTTGAGAGGGCGGGGGTGGTCCTCAACTCTTGAGAAGCGGACCAGGATGTGTGCTTCTTTTGTCCACAGGACA] [+] EMBL D42242 [CGATCACACCAAATGTGTGGGCCAACACTCCTGGTGAACTACAGATAAAGCAATTGAAGCTCAATTGACTCAAAGGTAGAAGGCGAGAGATGGTCACACTATCAAAGTGAGATTTTTACAGGACATGAGTGTATATCAACGAAGTTGGTGTGGGACTTCAGGATCGACAGTATGTCTTCTTTTCACATTCCATCAACCTTTTGAGAGGGCGGGGGTGGTCCTCAACTCTTGAGAAGCGGACCAGGATGTGTGCTTCTTTTGTCCACAGGACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8883#0 GACACTTCCCAAAACCCCAAACCGCCCATATCTCTCTCCTCTTCTCCGCTCCTCGCTTCC 60 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 CCCAAAACCCTCGCGGTGGCGGTGGGCCGCCGGTCTCATTCCGCCGGCGTCCACGGAGGC 120 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GGCCGGAGCCAGGCGCTCCGCGGGCCGGGGAGCCACCGGAAGGCTGGAACCCTAGCGGCG 180 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GCGGGTCTCCTCCCCCTCCCCGCGCGCCGGGCGGCGCCATGGCCATTCAGCGGCTGCTCG 240 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 CGAGCTCGCTCGTGGCCGCCACGCCGCGGTGGCTTCCCGTCGCCGCCGACTCGTTTCTCC 300 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GGCGCCGCCACCGCCCTCGCTGCTCCCCGCTCCCCGCGCTGCTATTTAACAGGAGGTCCT 360 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GGTCTAAACCAAGGAAAGTCTCACGAAGCATTTCCATTGTGTCTAGGAAGATGAACAAAC 420 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 AAGGAGATCTCTGTAATGAAGGCATGCTGCCACATATTCTGTGGTGGAAAGAGAAAATGG 480 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 AGAGGTGCAGGAAACCATCATCAATGCAATTGACTCAGAGACTTGTGTATTCAAATATTT 540 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TAGGATTGGATCCAACTTTAAGAAATGGAAGCTTGAAGGATGGAAGCCTGAACACGGAAA 600 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TGTTGCAATTCAAATCGAAGTTTCCTCGTGAAGTTCTACTTTGCAGAGTGGGAGATTTCT 660 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 ACGAGGCTGTTGGGTTTGATGCATGTATCCTTGTGGAGCATGCAGGCTTAAATCCTTTTG 720 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GAGGCTTGCGTTCTGATAGTATTCCAAAAGCTGGATGTCCAGTCATGAATTTGCGGCAGA 780 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 CATTGGATGATTTGACTCGATGTGGTTACTCTGTGTGCATAGTTGAAGAAATTCAAGGCC 840 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 CAACCCAAGCTCGTGCTAGGAAAGGCCGATTTATTTCTGGCCATGCACATCCTGGTAGTC 900 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 CTTATGTATTTGGTCTTGCTGAAGTAGACCATGATGTTGAGTTCCCTGATCCAATGCCTG 960 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TAGTTGGGATTTCACGATCTGCAAAAGGCTATTGCCTGATTTCTGTGCTAGAGACAATGA 1020 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 AAACATATTCAGCTGAGGAGGGCTTAACAGAGGAAGCAGTTGTTACTAAGCTTCGCATAT 1080 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GCCGTTATCATCATCTATACCTTCATAGTTCTTTGAGGAACAATTCTTCAGGCACATCAC 1140 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GCTGGGGAGAATTTGGCGAAGGTGGGCTATTGTGGGGAGAGTGCAGTGGAAAATCTTTTG 1200 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 AGTGGTTTGATGGTAATCCTATTGAAGAACTGTTATGCAAGGTAAGGGAAATATATGGGC 1260 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TTGAAGAGAAGACTGTTTTCCGTAATGTCAGTGTCTCATTGGAAGGGAGGCCTCAACCCT 1320 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TGTATCTTGGAACAGCTACTCAAATTGGGGTGATACCAACTGAGGGAATACCCAGTTTGC 1380 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TAAAAATTGTTCTCCCTCCAAACTTTGGTGGCCTTCCATCATTGTATATTAGAGATCTTC 1440 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TTCTTAACCCTCCATCTTTTGATGTTGCATCATCAGTTCAAGAGGCTTGCAGGCTTATGG 1500 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GTAGCATAACTTGCTCGATTCCTGAATTTACATGCATACCGGCAGCAAAGCTTGTGAAAT 1560 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TACTCGAGTCAAAAGAGGTTAATCACATCGAATTTTGTAGAATAAAGAATGTCCTCGATG 1620 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 AGGTGTTGTTCATGGGTAGCAATGCTGAGCTTTCTGCTATCCTGAATAAATTGCTTGATC 1680 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 CTGCCGCCATAGTTACTGGGTTCAAAGTTGAAGCCGATATACTAGTGAATGAATGTAGCT 1740 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TTATTTCACAACGTATAGCTGAAGTAATCTCTTTAGGTGGTGAAAGTGACCAGGCAATAA 1800 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 CTTCATCTGAATATATTCCGAAAGAGTTCTTCAATGGTATGGAGTCATCTTGGAAGGGAC 1860 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GTGTAAAAAGGGTGCATGCTGAAGAGGAGTTCTCAAATGTTGATATAGCTGCTGAGGCAC 1920 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TGTCAACAGCGGTCATTGAAGATTTTCTGCCAATTATTTCAAGAGTAAAATCTGTGATGT 1980 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 CCTCAAATGGAAGTTCGAAGGGAGAAATCAGTTATGCAAAAGAGCATGAATCTGTTTGGT 2040 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TTAAAGGGAGGCGATTCACACCAAATGTGTGGGCCAACACTCCTGGTGAACTACAGATAA 2100 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 AGCAATTGAAGCCTGCAATTGACTCAAAAGGTAGAAAGGTCGGAGAAGAATGGTTCACCA 2160 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 CTATCAAAGTTGAGAATGCTTTAACCAGGTACCATGAAGCTTGTGATAATGCAAAACGTA 2220 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 AAGTTCTTGAGTTGTTGAGAGGACTTTCAAGTGAATTGCAGGACAAGATTAATGTCCTTG 2280 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TCTTTTGCTCAACGATGCTCATCATAACAAAAGCACTTTTTGGTCATGTTAGTGAAGGAC 2340 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GAAGAAGGGGTTGGGTGCTTCCTACTATATCTCCCTTGTGTAAGGATAATGTTACAGAGG 2400 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ----------------------------------------------------TTGTAGCA 8 consensus_8883#0 AAATCTCAAGTGAAATGGAATTGTCAGGAACTTTTCCTTACTGGCTTGATACTAACCAAG 2460 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 AACTGGCAAAAGCGCCAATAGAGTTGGATTCAATTCTTTTTCAATTTATATATAATTCTG 68 consensus_8883#0 GGAATGCAATACTGAATGATGTCCATATGCACTCTTTGTTTATTCTTACTGGTCCAAACG 2520 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 GGAACTTCATGTT------TCTCAAAATGAAAATTTTATAGATAATCAACTGGCTAGTTC 122 consensus_8883#0 GTGGTGGTAAATCCAGTATGCTGAGATCAGTCTGTGCTGCTGCATTACTTGGAATATGTG 2580 consensus_8883#2 ---------------------------CCGTCTGTGCTGCTGCATTACTTGGAATATGTG 33 consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 TTTTCTTTAAAGGCCTCATGCCCTCATCAATCTGTAGTG-TGACTGACTTGT--TTTTTT 179 consensus_8883#0 GCCTGATGGTGCCAGCTGCTTCAGCTGTCATCCCACATTTCGATTCCATCATGCTGCATA 2640 consensus_8883#2 GCCTGATGGTGCCAGCTGCTTCAGCTGTCATCCCACATTTCGATTCCCTCATGCTGCATA 93 consensus_8883#3 ---CGATCACACCAAATGTGTGGGCCAACACTCCTGGT---GAACTACAGATAAAGCAAT 54 consensus_8883#1 AGCCACTGACATCAA---TCTTGGGTATTAGGCCTGAAT---ATTTCTATGTTATGCATT 233 * ** * * * ** * * *** consensus_8883#0 TGAAAG-CATAT----GATAGCCCAGCTGATGGTAAAAGTTCGTTTCAGATTGAAATGTC 2695 consensus_8883#2 TGAAAG-CATAT----GATAGCCCAGCTGATGGTAAAAGTTCGTTTCAGGTGCCAATTT- 147 consensus_8883#3 TGAAGCTCAATT----GACTCAAAGGTAGAAGGCGAGAGATGGTCACAC-TATCAAAGT- 108 consensus_8883#1 TTAAACTTATTCTGGAAATTATTGATGAAATGTTTCTAATTGAATTTAGCTAGTAGCCTG 293 * ** * * * * * * * * * * consensus_8883#0 AGAGATACGATCTTTAGTCTGCCGAGCTACAGCTAGGAGTCTTGTTCTAATTGATGAAAT 2755 consensus_8883#2 ----ATA-GCTTTTTCATTTTTTAAA-TATAATTTGTGTACTACATTCGCAGGTTGACAC 201 consensus_8883#3 -----GAGATTTTTACAGGACATGAGTGTATATCAACGAAGTTGGTGTGGGACTTCAGGA 163 consensus_8883#1 TTACTTATATTTGTTGGACAATTTAG-TCAATTTAATGTGCTTATGATGTTCCT--GTTT 350 * * * * * consensus_8883#0 ATGTAGGGGCACAGAAACAGCAAAAGGAAC--ATGTATAGCTGGTAGCATCATTGAAA-- 2811 consensus_8883#2 TCGGTGTTATTAGTTATTACCATATGTTAT--GT---TAGTTTATTTCATGATGGGATTT 256 consensus_8883#3 TCGACAGTATGTCTTCTTTTCACATTCCATCAACCTTTTGAGAGGGCGGGGGTGGTCCTC 223 consensus_8883#1 TGGTAAATATGCACAATATTCTGGTTTCATGCAT-TTTTTTTATTGGGGTTTTGAGCAGT 409 * * * * * consensus_8883#0 GACTCGATAA-TGTTGGCTGCATAGGCATCATATCAACTCATTTGCATGGCATTTTTGAC 2870 consensus_8883#2 AACCTGCTAA-AATTGTATTGATACAGCTATTGCTGTTGTAAACTAATTGTCTTACTAGC 315 consensus_8883#3 AACTCTTGAG-AAGCGGACCAGGATGTGTGCTTCTTTTGTCCACAGGACA---------- 272 consensus_8883#1 GAAGGACGAAGAAGGGGTTGGGTGCTTCCTACTATATCTCCCTTGTGTAAGGATAATGTT 469 * * * consensus_8883#0 CTTCCACTGTCACTCCACAATACTGATTTCAAAGCTATGGGAACCGAAATCATCGATAGG 2930 consensus_8883#2 TATCTTTTTAC------------------------------------------------- 326 consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ACAGAGGAAATCTCAAGTGAAATGGAAT-------------------------------- 497 consensus_8883#0 TGCATTCAGCCAACATGGGAAATTAATGGATGGCATCTGTAGAGAGAGTCTTGCTTTTCA 2990 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 AACAGCCAGGAAAGAAGGTATGCCTGACTTGATAATTANAAGAGCTGAGGAACTATATTT 3050 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GGCTATGAGCACAAACAGCAAGCAGACATCATCAGCTGTCCACCATGAAANATTCCATAG 3110 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 NCCACCTCTACTGAAAANAGCTTGGTTGAGAAGCCTAATTACCTGGGAAAAGGACTAGAG 3170 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 CTTCAATCTGGTTCCTTCGGATTACTAAGAAAAGAAATTGAGAGTGTTGTTACCACAATA 3230 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TGCAAGAAGAAACTGTTGGATCTCTACAACAAAAGGAGCATCTCAGAACTGATTGAGGTG 3290 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GTCTGTGTTGCTGTGGGTGCTAGGGAGCAACCCCCACCTTCAACTGTTGGCAGGTCCAGC 3350 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 ATTTATGTAATTATCAGACGTGACAGCAAGCTCTATATTGGACAGACGGATGATCTTGTG 3410 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 GGTCGACTTAGTGCTCACAGATCGAAGGAAGGTATGCAGGATGCCACGATATTATATATT 3470 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TTGGTACCTGGGAAGAGCATTGCATGCCAACTGGAAACTCTTCTCATAAATCAGCTACCT 3530 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 TTGAAAGGTTTCAAGCTCATCAACAAGGCAGATGGCAAGCATCGAAATTTCGGTATATCT 3590 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 CTTGTCCCAGGAGAGGCAATTGCCGCATAGAGCACACTGAGCATACCCACTGAAAATCTG 3650 consensus_8883#2 ------------------------------------------------------------ consensus_8883#3 ------------------------------------------------------------ consensus_8883#1 ------------------------------------------------------------ consensus_8883#0 ATGTACTACTAACTCTTTATAATATGCAATCTAATCGAACTCTAGGAGAGTAA 3703 consensus_8883#2 ----------------------------------------------------- consensus_8883#3 ----------------------------------------------------- consensus_8883#1 ----------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||