cluster # 8885

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Oryza sativa
cluster # 8885 cluster # 8885 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8885#0 length = 2585 sequences # 6
consensusID : consensus_8885#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2585
fasta sequence
                              [TCCTGTCTCCTCCAGTCTCCACACACACACGCAATGACTAAGCCTCTTCCCTCCACCATTCTTCTGATCTGCGTTTCAGCCATCGGGATGGTAGCCGCCGACGTCCCCGTGGCTGGACACCCAGGCTGCCAGACGAGGTGCGGGGACGTCGACATCCCGTTCCCCTTCGGCATCGGCGATCACTGCGCAATCCACCATGGCTTCAACATCATCTGCAAGCCTGTCAACGGCACCAAGAGGCCTTTCAAGGGGTCGTTTGAGGTGACGAAAATCTCTGTGCGCGATGCCAAAGCCTGGATGAAGATGCGGATCTCTTGGTAGTGCTATGACTCGGCCTCGAGCAAAATGAAGGAATGGGTGGATTTCCAAAACTTCACCTACATGCCCTTCAGGTTCTCATACGAGGATAACAAGATTTTCATCATCGGTTGCAATACAATGGCCTACATGAGAGGTGTTTCCTATGTCATAGGTTGCTTATCCACATGCTCCGATCAACCAAAAAATGGTTCTTGCTCTGGCGCTGGCTGTTGTTCGGTGGATGTCCCGCCAGACCTGGGTTATCTTGAGGCTTACTTCAATAAAGACTATAACTCCTCAGAAATCAGCTACAGCAGTTGTGGCTACGTGGTAGTGATGGAAAAGGCTGTGTAAGTGAGTGGCTGGACTTCTAGTTTTGAACTATAGCACCACTTACATTCCCTCAACAAACTTCTGGGATGACTACAACGGGACTGTTCCGGCCGTGATGGACTGGATAATTACATGGGAGACATGCGAGGAAGCGAAAACGAACATGAGTTCATATGCTTGTGTTAGCAACAATAGCGAATGCCTCAATTCAACGAATGGGAGAGGTTATCGCTGCAAGTGCTCCAAGGGGTTCGATGGCAATCCTTACGTCAAGGACGGTCTTCTTGGATGCAGAGGTCTCTCTGTCTCTCTCTCTCTCTCCCTCTCTCTATTCAGCAAAGTATACAATAAGAACTTATATTCACGAAAGTTTGCTTTGTTTCAGATATCAATGAATGTCTTGATAACACTACTTATCCATGCGCTGGAATTTGTGAAAATACAATCGGGAGTTACAAATGTTCTTGCCCTCAAGGACAAAATGAGCTGGCTCGGGGTGTCTGTGTTCCAGATCAGAAGATTCAGAAGTCCCAAGCTTGGGTGATGCCTGTTGTAGGGGCAAGTGTTGGATTTGTCATACTTGTGATCATGGCAACTTGTTCGTACTTGATCCGCGAGAGAAGAAAGCTGCAACACATCAAGCAGAAATATTTTAAGCTACACGGTGGTCTACTGCTGTTTCAAGAGATGAATTCAAATGAAAGGAAATCATTTACAATTTTCTCAGAAGCAGAGTTGCAGCATGCTACAAACAAGTTTGAC-AAAAACCAAATTCTTGGCCATGGTGGTCAT-GGCACTGTTTACAAGGGACTTCTCAAGGACAACACTAAAATAGCTGTCAAGAAATGCATGACAATGGATGAGCAACACAAGAAAGAATTTGGTAAAGAAATGCTAATCCTATCCTAAATAAACCACATAAACATTGTTAAACTATTAGGATGTTGCCTTG-AAGTACAAGTTCCTATGCTAGTATAT-GAATTTATCCCAAAT-GGAACGCTATCCAATCTCATCCATGGCAACCATGGCCAACACATTTCTCTAGTTACTCGTCTACGGATCGCCCATGAATCAGCTGAGGCACTAGCCTACCTCCACTCCTACGCTTCACCACCCATCATCCATGGTGATGTCAAGTCCTCCAACATCCTCCTCGATGTTAACTTCATGGCAAAAGTCTCCGACTTTGGTGCTTCCATCTTAGCTCCACTAGACAAGTCACAGCTTGTCACGCTAGTCCAAGGGACTTGGGGTTACCTTGATCCAGAGTATATGCAAACATGT-GAATTAA-CAGATAAGAGTGACGTTTACAGCTTTGGAGTTGTT-CTTCTAGAACTGCT-CACAAGGAAGAACGTTTTCAACCTTGATGCTCCTGGAAATGAGAAAAGTTTGTCAATGAGGTTTCTCTCAGCTATGAAGGAGAACAAGCTTGAGAATATATTGGACGATCAAATTAGCAATGAAGAGAACATGGAGTTTCTCGAAGAAGTTGTAGATTTAGCAAAGCAATGCTTGGCAATGTGTGGTGAGGATAGACCATCCATGAAGAAAGTTGCGGAGAAGCTCGATAGGCTGGTTAAGGTAATGCAACACCCATGGACGCAACAAAATCCTGAAGAGTTGGAGAGCTTGCTTGGAGAATCTTCTTACATTATAAGCTCAGGAGCCTCGAGTACAGGAAATTTCAGCATCGAGAAGAAAGTTGTCAAGGACCTAGCATCAGGGCGTTAAGCTGGAATCTCTTTGCTACCCAGCATACATCATATCACCATATCATACCGCGTCATATTGTATCATAGTTTTCACTTACCCTAGAAATTCAGACTCAGTTATGTTCATTATTAAAAAAATTTTGTGTAAAAATAAAAAAATATTGTTTGTGTAAACCTTTAGTCTTTATGGGACTATGTTTCATCATATATGAGAATAAGAAGCAAATCATACGAAGTCAA]

[+] EMBL AK111541             [TCCTGTCTCCTCCAGTCTCCACACACACACGCAATGACTAAGCCTCTTCCCTCCACCATTCTTCTGATCTGCGTTTCAGCCATCGGGATGGTAGCCGCCGACGTCCCCGTGGCTGGACACCCAGGCTGCCAGACGAGGTGCGGGGACGTCGACATCCCGTTCCCCTTCGGCATCGGCGATCACTGCGCAATCCACCATGGCTTCAACATCATCTGCAAGCCTGTCAACGGCACCAAGAGGCCTTTCAAGGGGTCGTTTGAGGTGACGAAAATCTCTGTGCGCGATGCCAAAGCCTGGATGAAGATGCGGATCTCTTGGTAGTGCTATGACTCGGCCTCGAGCAAAATGAAGGAATGGGTGGATTTCCAAAACTTCACCTACATGCCCTTCAGGTTCTCATACGAGGATAACAAGATTTTCATCATCGGTTGCAATACAATGGCCTACATGAGAGGTGTTTCCTATGTCATAGGTTGCTTATCCACATGCTCCGATCAACCAAAAAATGGTTCTTGCTCTGGCGCTGGCTGTTGTTCGGTGGATGTCCCGCCAGACCTGGGTTATCTTGAGGCTTACTTCAATAAAGACTATAACTCCTCAGAAATCAGCTACAGCAGTTGTGGCTACGTGGTAGTGATGGAAAAGGCTGTGTAAGTGAGTGGCTGGACTTCTAGTTTTGAACTATAGCACCACTTACATTCCCTCAACAAACTTCTGGGATGACTACAACGGGACTGTTCCGGCCGTGATGGACTGGATAATTACATGGGAGACATGCGAGGAAGCGAAAACGAACATGAGTTCATATGCTTGTGTTAGCAACAATAGCGAATGCCTCAATTCAACGAATGGGAGAGGTTATCGCTGCAAGTGCTCCAAGGGGTTCGATGGCAATCCTTACGTCAAGGACGGTCTTCTTGGATGCAGAGGTCTCTCTGTCTCTCTCTCTCTCTCCCTCTCTCTATTCAGCAAAGTATACAATAAGAACTTATATTCACGAAAGTTTGCTTTGTTTCAGATATCAATGAATGTCTTGATAACACTACTTATCCATGCGCTGGAATTTGTGAAAATACAATCGGGAGTTACAAATGTTCTTGCCCTCAAGGACAAAATGAGCTGGCTCGGGGTGTCTGTGTTCCAGATCAGAAGATTCAGAAGTCCCAAGCTTGGGTGATGCCTGTTGTAGGGGCAAGTGTTGGATTTGTCATACTTGTGATCATGGCAACTTGTTCGTACTTGATCCGCGAGAGAAGAAAGCTGCAACACATCAAGCAGAAATATTTTAAGCTACACGGTGGTCTACTGCTGTTTCAAGAGATGAATTCAAATGAAAGGAAATCATTTACAATTTTCTCAGAAGCAGAGTTGCAGCATGCTACAAACAAGTTTGAC AAAAACCAAATTCTTGGCCATGGTGGTCAT GGCACTGTTTACAAGGGACTTCTCAAGGACAACACTAAAATAGCTGTCAAGAAATGCATGACAATGGATGAGCAACACAAGAAAGAATTTGGTAAAGAAATGCTAATCCTATCCTAAATAAACCACATAAACATTGTTAAACTATTAGGATGTTGCCTTG AAGTACAAGTTCCTATGCTAGTATAT GAATTTATCCCAAAT GGAACGCTATCCAATCTCATCCATGGCAACCATGGCCAACACATTTCTCTAGTTACTCGTCTACGGATCGCCCATGAATCAGCTGAGGCACTAGCCTACCTCCACTCCTACGCTTCACCACCCATCATCCATGGTGATGTCAAGTCCTCCAACATCCTCCTCGATGTTAACTTCATGGCAAAAGTCTCCGACTTTGGTGCTTCCATCTTAGCTCCACTAGACAAGTCACAGCTTGTCACGCTAGTCCAAGGGACTTGGGGTTACCTTGATCCAGAGTATATGCAAACATGT GAATTAA CAGATAAGAGTGACGTTTACAGCTTTGGAGTTGTT CTTCTAGAACTGCT CACAAGGAAGAACGTTTTCAACCTTGATGCTCCTGGAAATGAGAAAAGTTTGTCAATGAGGTTTCTCTCAGCTATGAAGGAGAACAAGCTTGAGAATATATTGGACGATCAAATTAGCAATGAAGAGAACATGGAGTTTCTCGAAGAAGTTGTAGATTTAGCAAAGCAATGCTTGGCAATGTGTGGTGAGGATAGACCATCCATGAAGAAAGTTGCGGAGAAGCTCGATAGGCTGGTTAAGGTAATGCAACACCCATGGACGCAACAAAATCCTGAAGAGTTGGAGAGCTTGCTTGGAGAATCTTCTTACATTATAAGCTCAGGAGCCTCGAGTACAGGAAATTTCAGCATCGAGAAGAAAGTTGTCAAGGACCTAGCATCAGGGCGTTAAGCTGGAATCTCTTTGCTACCCAGCATACATCATATCACCATATCATACCGCGTCATATTGTATCATAGTTTTCACTTACCCTAGAAATTCAGACTCAGTTATGTTCATTATTAAAAAAATTTTGTGTAAAAATAAAAAAATATTGTTTGTGTACACCTTTAGTCTTTATGGGACTATGTTTCATCATATATGAGAATAAGAAGCAAATCATACGAAGTCAA]
[+] EMBL AU055937             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCGCTGGAATTTGTGAAAATACAATCGGGAGTTACAAATGTTCTTGCCCTCAAGGACAAAATGAGCTGGCTCGGGGTGTCTGTGTTCCAGATCAGAAGATTCAGAAGTCCCAAGCTTGGGTGATGCCTGTTGTAGGGGCAAGTGTTGGATTTGTCATACTTGTGATCATGGCAACTTGTTCGTACTTGATCCGCGAGAGAAGAAAGCTGCAACACATCAAGCAGAAATATTTTAAGCTACACGGTGGTCTACTGCTGTTTCAAGAGATGAATTCAAATGAAAGGAAATCATTTACAATTTTCTCAGAAGCAGAGTTGCAGCATGCTACAAACAAGTTTGACAAAAAACCAAATTCTTGGCCATGGTGGTCAT GGCACTGTTTACAAGGGACTTCTCAAGGACAACACTAAAATAGCTGTCAAGAAATGCATGACAATGGATGAGCAACACAAGAAAGAATTTGGTAAAGAAATGCTAATCCTATCCTAAATAAACCACATAAACATTGTTAAACTATTAGGATGTTGCCTTGAAAGTACAAGTTCCTATGCTAGTATATGGNATTTATCCCAAATGGGGACGNTATCCAAACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU032342             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGGGGCAAGTGTTGGATTTGTCATACTTGTGATCATGGCAACTTGTTCGTACTTGATCCGCGAGAGAAGAAAGCTGCAACACATCAAGCAGAAATATTTTAAGCTACACGGTGGTCTACTGCTGTNTCAAGAGATGAATTCAAATGAAAGGAAATCATTTACAATTTTCTCAGAAGCAGAGTTGCAGCATGCTACAAACAAGTNTGAC AAAAACCAAATTCTTGGCCATGGTGGTCATGGGCACTGTTTACAAGGGACTTCTCAAGGACAACACTAAAATAGCTGTTAAGAAATGCATGACAATGGATGAGCCACACAAGANAGAATTTGGTAAAGAAATGCTAATCCTATCCTAAATAAACCACAT AACATTGGTAAACTATTAGGATGTTGCCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF294212             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ttTACGGATCGCCCATGAATCATCTGACGCACTAGCCTACCTCCACTCCTACGCTCCACCACCCATCATCCATGGTGATGTCAAGTCCTCCAACATCCTCCTCGATGTTAACTTCATGGCAAAAGTCTCCGACTTTGGTGCTTCCATCTTAGCTCCACTAGACAAGTCACAGCTTGTCACGCTAGTCCAAGGGACTT GGGTTACCTTGATCCAGAGTATATGCAAACATGT GAATTAA CAGATAAGAGTGACGTTTACAGCTTTGGAGTTGTT CTTCTAGAACTGCT CACAAGGAAGAACGTTTTCAACCTTGATGCTCCTGGAAATGAGAAAAGTTTGTCAATGAGGTTTCTCTCAGCTATGAAGGAGAACAAGCTTGAGAATATATTGGACGATCAAATTAGCAATGAAGAGAACATGGAGTTTCTCGAAGAAGTTGTAGATTTAGCAAAGCAATGCTT                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CF294211             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ACTTGGGGTTACCTTGATCCAGAGTATATGCAAACATGT GAATTAA CAGATAAGAGTGACGTTTACAGCTTTGGAGTTGTT CTTCTAGAACTGCT CACAAGGAAGAACGTTTTCAACCTTGATGCTCCTGGAAATGAGAAAAGTTTGTCAATGAGGTTTCTCTCAGCTATGAAGGAGAACAAGCTTGAGAATATATTGGACGATCAAATTAGCAATGAAGAGAACATGGAGTTTCTCGAAGAAGTTGTAGATTTAGCAAAGCAATGCTTGGCAATGTGTGGTGAGGATAGACCATCCATGAAGAAAGTTGCGGAGAAGCTCGATAGGCTGGTTAAGGTAATGCAACACCCATGGACGCAACAAAATCCTGAAGAGTTGGAGAGCTTGCTTGGAGAATCTTCTTACATTATAAGCTCAGGAGCCTCGAGTACAGGAAATTTCAGCATCGAGAAGAAAGTTGTCAAGGACCTAGCATCAGGGCGTTAAGCTGGAATCTCTTTGCTACCCAGCATACATCATATCACCATATCATACCGCGTCATATTGTATCATAGTTTTCACTTACCCTAGAAATTCAGACTCAGTTATGTTCATTATTAAAAAAATTTTGTGTAAAAATAAAAAAATATTGTTTGTGTAAA                                                                  ]
[+] EMBL AU032343             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ttTATGNCAACCTGTGGATTTAACCAGATAAGAGTGACGTTTACAGCTTTGGAGTTGTTCCTTCTAGAACTGCTCCCCAAGGAAGAACGTTTTCAACCTTGATGCTCCTGGAAATGAGAAAAGTTTGTCAATGAGGTTTCTCTCAGCTATGAAGGAGAACAAGCTTGAGAATATATTGGACGATCAAATTAGCAATGAAGAGAACATGGAGTTTCTCGAAGAAGTTGTAGATTTAGCAAAGCAATGCTTGGCAATGTGTGGTGAGGATAGACCATCC TGAAGAAAGTTGCGGAGAAGCTCGATAGGCTGGTTAAGGTAATGCAACACCCATGGACGCAACAAAATCCTGAAGAGTTGGAGAGCTTGCTTGGAGAATCTTCTTACATTATAAGCTCAGGAGCCTCGAGTACAGGAAATTTCAGCATCGAGAAGAAAGTTGTCAAGGACCTAGCATCAGGGCGTTAAGCTGGAATCTCTTTGCTACCCAGCATACATCATATCACCATATCATACCGCGTCATATTGTATCATAGTTTTCACTTACCCTAGAAATTCAGACTCAGTTATGTTCATTATTAAANAAATTTTGTNTAAAAATANAANAATATTGTTTGTGTTAAaaa                                                               ]




>consensus_8885#0
TCCTGTCTCCTCCAGTCTCCACACACACACGCAATGACTAAGCCTCTTCCCTCCACCATT
CTTCTGATCTGCGTTTCAGCCATCGGGATGGTAGCCGCCGACGTCCCCGTGGCTGGACAC
CCAGGCTGCCAGACGAGGTGCGGGGACGTCGACATCCCGTTCCCCTTCGGCATCGGCGAT
CACTGCGCAATCCACCATGGCTTCAACATCATCTGCAAGCCTGTCAACGGCACCAAGAGG
CCTTTCAAGGGGTCGTTTGAGGTGACGAAAATCTCTGTGCGCGATGCCAAAGCCTGGATG
AAGATGCGGATCTCTTGGTAGTGCTATGACTCGGCCTCGAGCAAAATGAAGGAATGGGTG
GATTTCCAAAACTTCACCTACATGCCCTTCAGGTTCTCATACGAGGATAACAAGATTTTC
ATCATCGGTTGCAATACAATGGCCTACATGAGAGGTGTTTCCTATGTCATAGGTTGCTTA
TCCACATGCTCCGATCAACCAAAAAATGGTTCTTGCTCTGGCGCTGGCTGTTGTTCGGTG
GATGTCCCGCCAGACCTGGGTTATCTTGAGGCTTACTTCAATAAAGACTATAACTCCTCA
GAAATCAGCTACAGCAGTTGTGGCTACGTGGTAGTGATGGAAAAGGCTGTGTAAGTGAGT
GGCTGGACTTCTAGTTTTGAACTATAGCACCACTTACATTCCCTCAACAAACTTCTGGGA
TGACTACAACGGGACTGTTCCGGCCGTGATGGACTGGATAATTACATGGGAGACATGCGA
GGAAGCGAAAACGAACATGAGTTCATATGCTTGTGTTAGCAACAATAGCGAATGCCTCAA
TTCAACGAATGGGAGAGGTTATCGCTGCAAGTGCTCCAAGGGGTTCGATGGCAATCCTTA
CGTCAAGGACGGTCTTCTTGGATGCAGAGGTCTCTCTGTCTCTCTCTCTCTCTCCCTCTC
TCTATTCAGCAAAGTATACAATAAGAACTTATATTCACGAAAGTTTGCTTTGTTTCAGAT
ATCAATGAATGTCTTGATAACACTACTTATCCATGCGCTGGAATTTGTGAAAATACAATC
GGGAGTTACAAATGTTCTTGCCCTCAAGGACAAAATGAGCTGGCTCGGGGTGTCTGTGTT
CCAGATCAGAAGATTCAGAAGTCCCAAGCTTGGGTGATGCCTGTTGTAGGGGCAAGTGTT
GGATTTGTCATACTTGTGATCATGGCAACTTGTTCGTACTTGATCCGCGAGAGAAGAAAG
CTGCAACACATCAAGCAGAAATATTTTAAGCTACACGGTGGTCTACTGCTGTTTCAAGAG
ATGAATTCAAATGAAAGGAAATCATTTACAATTTTCTCAGAAGCAGAGTTGCAGCATGCT
ACAAACAAGTTTGACAAAAACCAAATTCTTGGCCATGGTGGTCATGGCACTGTTTACAAG
GGACTTCTCAAGGACAACACTAAAATAGCTGTCAAGAAATGCATGACAATGGATGAGCAA
CACAAGAAAGAATTTGGTAAAGAAATGCTAATCCTATCCTAAATAAACCACATAAACATT
GTTAAACTATTAGGATGTTGCCTTGAAGTACAAGTTCCTATGCTAGTATATGAATTTATC
CCAAATGGAACGCTATCCAATCTCATCCATGGCAACCATGGCCAACACATTTCTCTAGTT
ACTCGTCTACGGATCGCCCATGAATCAGCTGAGGCACTAGCCTACCTCCACTCCTACGCT
TCACCACCCATCATCCATGGTGATGTCAAGTCCTCCAACATCCTCCTCGATGTTAACTTC
ATGGCAAAAGTCTCCGACTTTGGTGCTTCCATCTTAGCTCCACTAGACAAGTCACAGCTT
GTCACGCTAGTCCAAGGGACTTGGGGTTACCTTGATCCAGAGTATATGCAAACATGTGAA
TTAACAGATAAGAGTGACGTTTACAGCTTTGGAGTTGTTCTTCTAGAACTGCTCACAAGG
AAGAACGTTTTCAACCTTGATGCTCCTGGAAATGAGAAAAGTTTGTCAATGAGGTTTCTC
TCAGCTATGAAGGAGAACAAGCTTGAGAATATATTGGACGATCAAATTAGCAATGAAGAG
AACATGGAGTTTCTCGAAGAAGTTGTAGATTTAGCAAAGCAATGCTTGGCAATGTGTGGT
GAGGATAGACCATCCATGAAGAAAGTTGCGGAGAAGCTCGATAGGCTGGTTAAGGTAATG
CAACACCCATGGACGCAACAAAATCCTGAAGAGTTGGAGAGCTTGCTTGGAGAATCTTCT
TACATTATAAGCTCAGGAGCCTCGAGTACAGGAAATTTCAGCATCGAGAAGAAAGTTGTC
AAGGACCTAGCATCAGGGCGTTAAGCTGGAATCTCTTTGCTACCCAGCATACATCATATC
ACCATATCATACCGCGTCATATTGTATCATAGTTTTCACTTACCCTAGAAATTCAGACTC
AGTTATGTTCATTATTAAAAAAATTTTGTGTAAAAATAAAAAAATATTGTTTGTGTAAAC
CTTTAGTCTTTATGGGACTATGTTTCATCATATATGAGAATAAGAAGCAAATCATACGAA
GTCAA
clustalw multiple alignements is not computed in this case