cluster # 8888

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Oryza sativa
cluster # 8888 cluster # 8888 Sequences # 6 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8888#0 length = 2531 sequences # 1
consensus_8888#1 length = 1331 sequences # 1

consensus_8888#2 length = 1027 sequences # 2
consensus_8888#3 length = 585 sequences # 1
consensus_8888#4 length = 402 sequences # 1

consensusID : consensus_8888#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2531
fasta sequence

                              [CCGCGTCCCGGCCGGCTGCCGGCGCACTCACGGCGGCGATGCCCGTCGCGGCGGGGGAGGCCATGCCTCCGCTTCCGCCTCTGCCCTGACGGACCCCCTCGCTCCCCTCCTCCAGAATCCTCTTGCGTCCACGAGACCCGCCGCGATCTCGAATTCGCCGCTCCACCCATGACCTACCTGGCGACGTCCCAATCGTTCCAGTTTCCGATGATCGATTGCTCCCGCAACCGAAGGTTGGGGGGAGAGGAAGCTGCAGGGTTACTCGAGGCGTGATCGCTGACGGGGGCCGCACCGCCGCGTGGAGCAGCCGCTCCGACTCCGAGCCATACTTGGTACATTCCCCATATTAGGATGTTGCGTGGCTGGACATCTTCAAGGTTCCCATTGGAGTCTAGAATGTTGCGCATTCCTTGTGTTGTTTGACTCTTTAATAGGACTGCTGCTTCATGCGTGTAATCATGCCAAGGAGTGGGGATGAACAGAAGAAAGGAGTACTCTCATATTCCGGCGGGCTGTGAAGAAGTGGGGTTAAAGCACCAAAGATTAAGACGGTATCCAGGATTCGACACGTCGGTGAGGCTACCTTCAAGTCTGGAGTGGCTCGAAGACCGAGGAATATCCTGTCTGTTGCAAAGACCTAGCAATACTTGATGATGAGTGTATACATGTTCTTTTAAGAGAACAAATTACAGCGACAAGGATTGGAAGGTCCATGGACGTCAAAAGGTACGTAACACATGTACTTTCGTCCTATTTCTTTCCTGGACATGTTTGCTTGCTTGATGTATATGCTCTAATAGTAAGCTAGGATTCCAGTGAATATCAATGCCTTTCTTCGTTCTTCTAATGGTACATGTTTAATCCATGGTACTATATATCAGTTAATTTTATAAAGAAATCTACGATAACTAAAGCAAAAATACGATCGATAACATTGAGAATTAAGACACTTTAATGATTACTCCAAAACCTAGTTCTCTCTGTCTCTCTCTAGTTAGTCTGGAGGTTGCAGATTGCATTGTGCATGCAAGGCTGCAAGAGACTAGTGTATTTTCCCCTTATCATCCTAGCTAGATATATTATAGTTCTATAGTTCTGTATACAGTTTGCTGCATTAACGAGCAGACTGCTCTACCTTAATTTGTTCGGCAATATTAACCATTTTACCCGGCAAAACCATCCCATTAAATAATTGTAATTGTATACTCTCTTCGGTCATAAATATTTGATATTTAAAACAAAATCTTGTGAAACTTTTGACCATTAATTGTTTTCTCAAAATGCTTTGTTTAAATGCATCAACTTATTCTAATATAAGATTGATGGGCAAAGTCTTAAAAATTTGACAATTTTAGTTCCATTTATGGCCAAAACTTGTGCAACCATTTACTTGCTCAATTTTTAAATATATAACACTGTTGATTTTTAGATATGATATTTAACCATTCATCTTATTAAAAAAATATGATGCAAATATTTTAAAAAAATATAAGTCACGCTTAACGTATTTTGTGTTAAACATCAAATTTATGACTGGAGGGAGCAATTGATTCATTCACCTGGCTACAGTACGCAGTACGTTCCGTGTGACAATTTTCGTTTCATTTTGTTCATTTGCATTTTATATTAATTCACGACAGCACAAAATCAGTTATTATATCTGTTATTTTCCATACAAGGTTTGTTTTTCTTGACTTTGCAAGGTTATAGCTAGACATAATACTTTTTTAATAAATTCTACGTTTTACCATTGACAAGTAATTGGTTCTACAAATTACCATCAACGAATCTAATTTTTACGAAATACCATCACACACGCACTTTTCTTTTTCTTTTTCATCGTTATTAATGGACTATTAGTTGATTGACTTAGATAAACCCCATATAAAAAGTTCACTTTACCCTAAAATATAAGGACTGCCTAAGCTGATATTGCACTTCTAAGGGTGGTCTCTAGAACACCACAAAATAGATTTTTCTCCCGCCTCCTCTATATACTAGTACTAAGTACTTATATAGTACATGGGGAACCTTGAGTAAAGGGATCGGACAAATCTATTATAACTTATTAAAGGAATAGTAAAAGGAGCATTCACGTTCACTCTCACAGCTTAGAAATTCTCACATTAATCGGGGAAAAAGAAAAAACAGAGTCCATATAGGAATACAATTTAAAAACAGCTGAAACTCGGAATTTTAAATAGGGAATATAGAAAAAAGAGACTAGAGTCCATACCGGTATACAATTTTGAACTGTTTGAAATTCAGAATTAAAAAATAGGAAAACTAAAACTAGAGGTCAGAGTCCCTATAGAAATACAATTAATAAGAAATATTGAAAGAAGATTATATAGCCCATATAGAATATAATTTAGAAAAGAATAAAATTCGGAATTAAAAAATAAAAAAATATTAAAAGATGAGTTTAGAGTCCATATAGAAATACAATTAGAAACAACGAAAATTTGGAAATTAAAAAAGGAATATTGAAAGAAGATTCTAGAGTTCATATAGGAATTTAGAACAAACTG]

[+] EMBL AK070396             [CCGCGTCCCGGCCGGCTGCCGGCGCACTCACGGCGGCGATGCCCGTCGCGGCGGGGGAGGCCATGCCTCCGCTTCCGCCTCTGCCCTGACGGACCCCCTCGCTCCCCTCCTCCAGAATCCTCTTGCGTCCACGAGACCCGCCGCGATCTCGAATTCGCCGCTCCACCCATGACCTACCTGGCGACGTCCCAATCGTTCCAGTTTCCGATGATCGATTGCTCCCGCAACCGAAGGTTGGGGGGAGAGGAAGCTGCAGGGTTACTCGAGGCGTGATCGCTGACGGGGGCCGCACCGCCGCGTGGAGCAGCCGCTCCGACTCCGAGCCATACTTGGTACATTCCCCATATTAGGATGTTGCGTGGCTGGACATCTTCAAGGTTCCCATTGGAGTCTAGAATGTTGCGCATTCCTTGTGTTGTTTGACTCTTTAATAGGACTGCTGCTTCATGCGTGTAATCATGCCAAGGAGTGGGGATGAACAGAAGAAAGGAGTACTCTCATATTCCGGCGGGCTGTGAAGAAGTGGGGTTAAAGCACCAAAGATTAAGACGGTATCCAGGATTCGACACGTCGGTGAGGCTACCTTCAAGTCTGGAGTGGCTCGAAGACCGAGGAATATCCTGTCTGTTGCAAAGACCTAGCAATACTTGATGATGAGTGTATACATGTTCTTTTAAGAGAACAAATTACAGCGACAAGGATTGGAAGGTCCATGGACGTCAAAAGGTACGTAACACATGTACTTTCGTCCTATTTCTTTCCTGGACATGTTTGCTTGCTTGATGTATATGCTCTAATAGTAAGCTAGGATTCCAGTGAATATCAATGCCTTTCTTCGTTCTTCTAATGGTACATGTTTAATCCATGGTACTATATATCAGTTAATTTTATAAAGAAATCTACGATAACTAAAGCAAAAATACGATCGATAACATTGAGAATTAAGACACTTTAATGATTACTCCAAAACCTAGTTCTCTCTGTCTCTCTCTAGTTAGTCTGGAGGTTGCAGATTGCATTGTGCATGCAAGGCTGCAAGAGACTAGTGTATTTTCCCCTTATCATCCTAGCTAGATATATTATAGTTCTATAGTTCTGTATACAGTTTGCTGCATTAACGAGCAGACTGCTCTACCTTAATTTGTTCGGCAATATTAACCATTTTACCCGGCAAAACCATCCCATTAAATAATTGTAATTGTATACTCTCTTCGGTCATAAATATTTGATATTTAAAACAAAATCTTGTGAAACTTTTGACCATTAATTGTTTTCTCAAAATGCTTTGTTTAAATGCATCAACTTATTCTAATATAAGATTGATGGGCAAAGTCTTAAAAATTTGACAATTTTAGTTCCATTTATGGCCAAAACTTGTGCAACCATTTACTTGCTCAATTTTTAAATATATAACACTGTTGATTTTTAGATATGATATTTAACCATTCATCTTATTAAAAAAATATGATGCAAATATTTTAAAAAAATATAAGTCACGCTTAACGTATTTTGTGTTAAACATCAAATTTATGACTGGAGGGAGCAATTGATTCATTCACCTGGCTACAGTACGCAGTACGTTCCGTGTGACAATTTTCGTTTCATTTTGTTCATTTGCATTTTATATTAATTCACGACAGCACAAAATCAGTTATTATATCTGTTATTTTCCATACAAGGTTTGTTTTTCTTGACTTTGCAAGGTTATAGCTAGACATAATACTTTTTTAATAAATTCTACGTTTTACCATTGACAAGTAATTGGTTCTACAAATTACCATCAACGAATCTAATTTTTACGAAATACCATCACACACGCACTTTTCTTTTTCTTTTTCATCGTTATTAATGGACTATTAGTTGATTGACTTAGATAAACCCCATATAAAAAGTTCACTTTACCCTAAAATATAAGGACTGCCTAAGCTGATATTGCACTTCTAAGGGTGGTCTCTAGAACACCACAAAATAGATTTTTCTCCCGCCTCCTCTATATACTAGTACTAAGTACTTATATAGTACATGGGGAACCTTGAGTAAAGGGATCGGACAAATCTATTATAACTTATTAAAGGAATAGTAAAAGGAGCATTCACGTTCACTCTCACAGCTTAGAAATTCTCACATTAATCGGGGAAAAAGAAAAAACAGAGTCCATATAGGAATACAATTTAAAAACAGCTGAAACTCGGAATTTTAAATAGGGAATATAGAAAAAAGAGACTAGAGTCCATACCGGTATACAATTTTGAACTGTTTGAAATTCAGAATTAAAAAATAGGAAAACTAAAACTAGAGGTCAGAGTCCCTATAGAAATACAATTAATAAGAAATATTGAAAGAAGATTATATAGCCCATATAGAATATAATTTAGAAAAGAATAAAATTCGGAATTAAAAAATAAAAAAATATTAAAAGATGAGTTTAGAGTCCATATAGAAATACAATTAGAAACAACGAAAATTTGGAAATTAAAAAAGGAATATTGAAAGAAGATTCTAGAGTTCATATAGGAATTTAGAACAAACTG]




>consensus_8888#0
CCGCGTCCCGGCCGGCTGCCGGCGCACTCACGGCGGCGATGCCCGTCGCGGCGGGGGAGG
CCATGCCTCCGCTTCCGCCTCTGCCCTGACGGACCCCCTCGCTCCCCTCCTCCAGAATCC
TCTTGCGTCCACGAGACCCGCCGCGATCTCGAATTCGCCGCTCCACCCATGACCTACCTG
GCGACGTCCCAATCGTTCCAGTTTCCGATGATCGATTGCTCCCGCAACCGAAGGTTGGGG
GGAGAGGAAGCTGCAGGGTTACTCGAGGCGTGATCGCTGACGGGGGCCGCACCGCCGCGT
GGAGCAGCCGCTCCGACTCCGAGCCATACTTGGTACATTCCCCATATTAGGATGTTGCGT
GGCTGGACATCTTCAAGGTTCCCATTGGAGTCTAGAATGTTGCGCATTCCTTGTGTTGTT
TGACTCTTTAATAGGACTGCTGCTTCATGCGTGTAATCATGCCAAGGAGTGGGGATGAAC
AGAAGAAAGGAGTACTCTCATATTCCGGCGGGCTGTGAAGAAGTGGGGTTAAAGCACCAA
AGATTAAGACGGTATCCAGGATTCGACACGTCGGTGAGGCTACCTTCAAGTCTGGAGTGG
CTCGAAGACCGAGGAATATCCTGTCTGTTGCAAAGACCTAGCAATACTTGATGATGAGTG
TATACATGTTCTTTTAAGAGAACAAATTACAGCGACAAGGATTGGAAGGTCCATGGACGT
CAAAAGGTACGTAACACATGTACTTTCGTCCTATTTCTTTCCTGGACATGTTTGCTTGCT
TGATGTATATGCTCTAATAGTAAGCTAGGATTCCAGTGAATATCAATGCCTTTCTTCGTT
CTTCTAATGGTACATGTTTAATCCATGGTACTATATATCAGTTAATTTTATAAAGAAATC
TACGATAACTAAAGCAAAAATACGATCGATAACATTGAGAATTAAGACACTTTAATGATT
ACTCCAAAACCTAGTTCTCTCTGTCTCTCTCTAGTTAGTCTGGAGGTTGCAGATTGCATT
GTGCATGCAAGGCTGCAAGAGACTAGTGTATTTTCCCCTTATCATCCTAGCTAGATATAT
TATAGTTCTATAGTTCTGTATACAGTTTGCTGCATTAACGAGCAGACTGCTCTACCTTAA
TTTGTTCGGCAATATTAACCATTTTACCCGGCAAAACCATCCCATTAAATAATTGTAATT
GTATACTCTCTTCGGTCATAAATATTTGATATTTAAAACAAAATCTTGTGAAACTTTTGA
CCATTAATTGTTTTCTCAAAATGCTTTGTTTAAATGCATCAACTTATTCTAATATAAGAT
TGATGGGCAAAGTCTTAAAAATTTGACAATTTTAGTTCCATTTATGGCCAAAACTTGTGC
AACCATTTACTTGCTCAATTTTTAAATATATAACACTGTTGATTTTTAGATATGATATTT
AACCATTCATCTTATTAAAAAAATATGATGCAAATATTTTAAAAAAATATAAGTCACGCT
TAACGTATTTTGTGTTAAACATCAAATTTATGACTGGAGGGAGCAATTGATTCATTCACC
TGGCTACAGTACGCAGTACGTTCCGTGTGACAATTTTCGTTTCATTTTGTTCATTTGCAT
TTTATATTAATTCACGACAGCACAAAATCAGTTATTATATCTGTTATTTTCCATACAAGG
TTTGTTTTTCTTGACTTTGCAAGGTTATAGCTAGACATAATACTTTTTTAATAAATTCTA
CGTTTTACCATTGACAAGTAATTGGTTCTACAAATTACCATCAACGAATCTAATTTTTAC
GAAATACCATCACACACGCACTTTTCTTTTTCTTTTTCATCGTTATTAATGGACTATTAG
TTGATTGACTTAGATAAACCCCATATAAAAAGTTCACTTTACCCTAAAATATAAGGACTG
CCTAAGCTGATATTGCACTTCTAAGGGTGGTCTCTAGAACACCACAAAATAGATTTTTCT
CCCGCCTCCTCTATATACTAGTACTAAGTACTTATATAGTACATGGGGAACCTTGAGTAA
AGGGATCGGACAAATCTATTATAACTTATTAAAGGAATAGTAAAAGGAGCATTCACGTTC
ACTCTCACAGCTTAGAAATTCTCACATTAATCGGGGAAAAAGAAAAAACAGAGTCCATAT
AGGAATACAATTTAAAAACAGCTGAAACTCGGAATTTTAAATAGGGAATATAGAAAAAAG
AGACTAGAGTCCATACCGGTATACAATTTTGAACTGTTTGAAATTCAGAATTAAAAAATA
GGAAAACTAAAACTAGAGGTCAGAGTCCCTATAGAAATACAATTAATAAGAAATATTGAA
AGAAGATTATATAGCCCATATAGAATATAATTTAGAAAAGAATAAAATTCGGAATTAAAA
AATAAAAAAATATTAAAAGATGAGTTTAGAGTCCATATAGAAATACAATTAGAAACAACG
AAAATTTGGAAATTAAAAAAGGAATATTGAAAGAAGATTCTAGAGTTCATATAGGAATTT
AGAACAAACTG

consensusID : consensus_8888#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1331
fasta sequence

                              [ACCAGCAACCACTCGAGACTGTTTATCTCGTGTTTACCTACACACCACGAGCTACTATACACACACCCTCTCGATCTCATCACCGGTATTCACCTTCTCTCCCTTCAGTACGTTCTCAAGAGATTAGCCTCTTGCAGCTAGCCACCATGTCTAGGGTGCTGGAGCCTCTCGTCGTCGGGAAGGTGATCGGAGAGGTCATCGACAACTTCAACCCCACGGTGAAGATGACGGCGACCTACAGCTCCAACAAGCAGGTGTTCAACGGCCACGAGTTATTCCCGTCGGCGGTCGTGTCCAAGCCGCGAGTCGAGGTTCAGGGCGGCGACCTGAGGTCTTTCTTCACACTGGTTATGACAGATCCAGACGTGCCAGGGCCTAGTGATCCGTACCTGAGGGAGCACCTCCACTGGATCGTCACTGATATTCCTGGCACCACTGATGCTTCCTTTGGGAGGGAGGTGGTGAGCTACGAGAGCCCGAAGCCCAACATTGGCATCCACAGGTTCGTCCTCGTGCTGTTCAAGCAGAAGCGCCGTCAGGCGGTGACCCCGCCATCCTCCAGGGACTACTTCAGCACCCGCCGCTTCGCCGCCGACAACGACCTCGGCCTCCCCGTCGCCGCCGTCTACTTCAACGCGCAGCGAGAGACGGCCGCTCGCCGCCGCTAATTAACCAAACTGCCAAAAACCAAATTAAGCCCCTCTTGCAGGCATGCAATATGCCTCCTGCAATATTAATTGCAGATGCAGCTAGCCTTCCAAACTATATATTGCAACTAATTAAGAATGGACTACTACATATATAATCTAGGGATCGATTGAGCTAGATCACCTAGTGGCATATATATATCAGCCACTATTAGCTTAGCCATGTATGAACCAAATAAGAACTCGGTGCAGCAAGCGCGAGCCACTGTTTAGTTCGTCAGTGTAGTTAATTGGTATATATGCCTATATATCCGTGTCTGCAAGAGCTAGGTGAGACACGTGAGACGTACTCGCCTCGTACGTGTTGCACTATAGCTTGAGTCAATCTCAAGCTCCTGCGTATATCCAGCTGAAGATCGCAATGTTCGCCGGCGGCGAAACAGCTGGTGCTGGGAGAGGCGAAAGGCGATGCATAATGCATTGTGTTGACTGGGAGCAGTTTAAATTGACGTGTCGGGCGGCGAAGGCAGGAAGAGGAAGTGGCCATGGCTCTCTAGTACTCACTTTGTCAGTTACAAGCTACTATATTTATCCTGTTATGTGCGTGTGTGAGTGGCTGCAGCTAGCTATATATGCACTTTTGCAGCTTGCAGTAACGTGTTTGTACTTTTATGGCATGATCCT]

[+] EMBL AK110622             [ACCAGCAACCACTCGAGACTGTTTATCTCGTGTTTACCTACACACCACGAGCTACTATACACACACCCTCTCGATCTCATCACCGGTATTCACCTTCTCTCCCTTCAGTACGTTCTCAAGAGATTAGCCTCTTGCAGCTAGCCACCATGTCTAGGGTGCTGGAGCCTCTCGTCGTCGGGAAGGTGATCGGAGAGGTCATCGACAACTTCAACCCCACGGTGAAGATGACGGCGACCTACAGCTCCAACAAGCAGGTGTTCAACGGCCACGAGTTATTCCCGTCGGCGGTCGTGTCCAAGCCGCGAGTCGAGGTTCAGGGCGGCGACCTGAGGTCTTTCTTCACACTGGTTATGACAGATCCAGACGTGCCAGGGCCTAGTGATCCGTACCTGAGGGAGCACCTCCACTGGATCGTCACTGATATTCCTGGCACCACTGATGCTTCCTTTGGGAGGGAGGTGGTGAGCTACGAGAGCCCGAAGCCCAACATTGGCATCCACAGGTTCGTCCTCGTGCTGTTCAAGCAGAAGCGCCGTCAGGCGGTGACCCCGCCATCCTCCAGGGACTACTTCAGCACCCGCCGCTTCGCCGCCGACAACGACCTCGGCCTCCCCGTCGCCGCCGTCTACTTCAACGCGCAGCGAGAGACGGCCGCTCGCCGCCGCTAATTAACCAAACTGCCAAAAACCAAATTAAGCCCCTCTTGCAGGCATGCAATATGCCTCCTGCAATATTAATTGCAGATGCAGCTAGCCTTCCAAACTATATATTGCAACTAATTAAGAATGGACTACTACATATATAATCTAGGGATCGATTGAGCTAGATCACCTAGTGGCATATATATATCAGCCACTATTAGCTTAGCCATGTATGAACCAAATAAGAACTCGGTGCAGCAAGCGCGAGCCACTGTTTAGTTCGTCAGTGTAGTTAATTGGTATATATGCCTATATATCCGTGTCTGCAAGAGCTAGGTGAGACACGTGAGACGTACTCGCCTCGTACGTGTTGCACTATAGCTTGAGTCAATCTCAAGCTCCTGCGTATATCCAGCTGAAGATCGCAATGTTCGCCGGCGGCGAAACAGCTGGTGCTGGGAGAGGCGAAAGGCGATGCATAATGCATTGTGTTGACTGGGAGCAGTTTAAATTGACGTGTCGGGCGGCGAAGGCAGGAAGAGGAAGTGGCCATGGCTCTCTAGTACTCACTTTGTCAGTTACAAGCTACTATATTTATCCTGTTATGTGCGTGTGTGAGTGGCTGCAGCTAGCTATATATGCACTTTTGCAGCTTGCAGTAACGTGTTTGTACTTTTATGGCATGATCCT]




>consensus_8888#1
ACCAGCAACCACTCGAGACTGTTTATCTCGTGTTTACCTACACACCACGAGCTACTATAC
ACACACCCTCTCGATCTCATCACCGGTATTCACCTTCTCTCCCTTCAGTACGTTCTCAAG
AGATTAGCCTCTTGCAGCTAGCCACCATGTCTAGGGTGCTGGAGCCTCTCGTCGTCGGGA
AGGTGATCGGAGAGGTCATCGACAACTTCAACCCCACGGTGAAGATGACGGCGACCTACA
GCTCCAACAAGCAGGTGTTCAACGGCCACGAGTTATTCCCGTCGGCGGTCGTGTCCAAGC
CGCGAGTCGAGGTTCAGGGCGGCGACCTGAGGTCTTTCTTCACACTGGTTATGACAGATC
CAGACGTGCCAGGGCCTAGTGATCCGTACCTGAGGGAGCACCTCCACTGGATCGTCACTG
ATATTCCTGGCACCACTGATGCTTCCTTTGGGAGGGAGGTGGTGAGCTACGAGAGCCCGA
AGCCCAACATTGGCATCCACAGGTTCGTCCTCGTGCTGTTCAAGCAGAAGCGCCGTCAGG
CGGTGACCCCGCCATCCTCCAGGGACTACTTCAGCACCCGCCGCTTCGCCGCCGACAACG
ACCTCGGCCTCCCCGTCGCCGCCGTCTACTTCAACGCGCAGCGAGAGACGGCCGCTCGCC
GCCGCTAATTAACCAAACTGCCAAAAACCAAATTAAGCCCCTCTTGCAGGCATGCAATAT
GCCTCCTGCAATATTAATTGCAGATGCAGCTAGCCTTCCAAACTATATATTGCAACTAAT
TAAGAATGGACTACTACATATATAATCTAGGGATCGATTGAGCTAGATCACCTAGTGGCA
TATATATATCAGCCACTATTAGCTTAGCCATGTATGAACCAAATAAGAACTCGGTGCAGC
AAGCGCGAGCCACTGTTTAGTTCGTCAGTGTAGTTAATTGGTATATATGCCTATATATCC
GTGTCTGCAAGAGCTAGGTGAGACACGTGAGACGTACTCGCCTCGTACGTGTTGCACTAT
AGCTTGAGTCAATCTCAAGCTCCTGCGTATATCCAGCTGAAGATCGCAATGTTCGCCGGC
GGCGAAACAGCTGGTGCTGGGAGAGGCGAAAGGCGATGCATAATGCATTGTGTTGACTGG
GAGCAGTTTAAATTGACGTGTCGGGCGGCGAAGGCAGGAAGAGGAAGTGGCCATGGCTCT
CTAGTACTCACTTTGTCAGTTACAAGCTACTATATTTATCCTGTTATGTGCGTGTGTGAG
TGGCTGCAGCTAGCTATATATGCACTTTTGCAGCTTGCAGTAACGTGTTTGTACTTTTAT
GGCATGATCCT

consensusID : consensus_8888#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1027
fasta sequence

                              [TGCAGGGTTACTCGAGGCGTGATCGCTGACGGGGGCCGCACCGCCGCGTGGAGCAGCCGCTCCGACTCCGAGCCATACTTGGTACATTCCCCATATTAGGATGTTGCGTGGCTGGACATCTTCAAGGTTCCCATTGGAGTCTAGAATGTTGCGCATTCCTTGTGTTGTTTGACTCTTTAATAGGACTGCTGCTTCATGCGTGTAATCATGCCAAGGAGTGGGGATGAACAGAAGAAAGGAGTACTCTCATATTCCGGCGGGCTGTGAAGAAGTGGGGTTAAAGCACCAAAGATTAAGACGGTATCCAGGATTCGACACGTCGGTGAGGCTACCTTCAAGTCTGGAGTGGCTCGAAGACCGAGGAATATCCTGTCTGTTGCAAAGACCTAGCAATACTTGATGATGAATGTATACATGTTCTTTTAAGAGAACAAATTACAGAGACAAGGATTGGAAGGTCCATGGACGTCAAAAGGTAGGAACTTGCAGTGGTTGTCTACCGGAGGGTGTTTCGCTAGGTGAGGGGCGGCAGGCACAGACCAGTGTGAAGAAAGACCTCAGGTCGCCGCCCTGAACCTCGACGCGCGGCTTGGACACGACCGCCGACGGGAAGAACTCGTGGCCGTTGAACACCTGCTTGTTGGAGCTGTAGGTCGCCGTCATCTTCACCGTGGGGTTGAAGTTGTCGATGACCTCTCCGATCACCTTCCCGACGACGAGAGGCTCCAGCACCCTAGACATGGTGGCTAGCTGCAAGAGGCTAATCTCTTGAGAACGTACTGAAGGGAGAGAAGGTGAATACCGGTGATGAGATCGTGAGGGTGTGTGTATAGTAGCTCGTGGTGTGTAGGTAAACACGAGATAAACAGTCTCGAGTGGTTGCTGGTCTTGCTGATGACAATGGGAGGGCCGGCCGGGGCTCTATTTATAGCTGCGTGGAGCCGATGGATCGAACTGATAAGGAAAATGTATAGACAATGTAAAGTATTAGAAAATATGTAAATTGTCCCATCTTCATTTTCGCCTA]

[+] EMBL CB627988             [TGCAGGGTTACTCGAGGCGTGATCGCTGACGGGGGCCGCACCGCCGCGTGGAGCAGCCGCTCCGACTCCGAGCCATACTTGGTACATTCCCCATATTAGGATGTTGCGTGGCTGGACATCTTCAAGGTTCCCATTGGAGTCTAGAATGTTGCGCATTCCTTGTGTTGTTTGACTCTTTAATAGGACTGCTGCTTCATGCGTGTAATCATGCCAAGGAGTGGGGATGAACAGAAGAAAGGAGTACTCTCATATTCCGGCGGGCTGTGAAGAAGTGGGGTTAAAGCACCAAAGATTAAGACGGTATCCAGGATTCGACACGTCGGTGAGGCTACCTTCAAGTCTGGAGTGGCTCGAAGACCGAGGAATATCCTGTCTGTTGCAAAGACCTAGCAATACTTGATGATGAATGTATACATGTTCTTTTAAGAGAACAAATTACAGAGACAAGGATTGGAAGGTCCATGGACGTCAAAAGGTAGGAACTTGCAGTGGTTGTCTACCGGAGGGTGTTTCGCTAGGTGAGGGGCGGCAGGCACAGACCAGTGTGAAGAAAGACCTCAGGTCGCCGCCCTGAACCTCGACGCGCGGCTTGGACACGACCGCCGACGGGAAGAACTCGTGGCCGTTGAACACCTGCTTGTTGGAGCTGTAGGTCGCCGTCATCTTCACCGTGGGGTTGAAGTTGTCGATGACCTCTCCGATCACCTTCCCGACGACGAGAGGCTCCAGCACCCTAGACATGGTGGCTAGCTGCAAGAGGC                                                                                                                                                                                                                                                                          ]
[-] EMBL CB627989             [                                                                                                                                                                                                                       GAGTGGGGATGAACAGAAGAAAGGAGTACTCTCATATTCCGGCGGGCTGTGAAGAAGTGGGGTTAAAGCACCAAAGATTAAGACGGTATCCAGGATTCGACACGTCGGTGAGGCTACCTTCAAGTCTGGAGTGGCTCGAAGACCGAGGAATATCCTGTCTGTTGCAAAGACCTAGCAATACTTGATGATGAATGTATACATGTTCTTTTAAGAGAACAAATTACAGAGACAAGGATTGGAAGGTCCATGGACGTCAAAAGGTAGGAACTTGCAGTGGTTGTCTACCGGAGGGTGTTTCGCTAGGTGAGGGGCGGCAGGCACAGACCAGTGTGAAGAAAGACCTCAGGTCGCCGCCCTGAACCTCGACGCGCGGCTTGGACACGACCGCCGACGGGAAGAACTCGTGGCCGTTGAACACCTGCTTGTTGGAGCTGTAGGTCGCCGTCATCTTCACCGTGGGGTTGAAGTTGTCGATGACCTCTCCGATCACCTTCCCGACGACGAGAGGCTCCAGCACCCTAGACATGGTGGCTAGCTGCAAGAGGCTAATCTCTTGAGAACGTACTGAAGGGAGAGAAGGTGAATACCGGTGATGAGATCGTGAGGGTGTGTGTATAGTAGCTCGTGGTGTGTAGGTAAACACGAGATAAACAGTCTCGAGTGGTTGCTGGTCTTGCTGATGACAATGGGAGGGCCGGCCGGGGCTCTATTTATAGCTGCGTGGAGCCGATGGATCGAACTGATAAGGAAAATGTATAGACAATGTAAAGTATTAGAAAATATGTAAATTGTCCCATCTTCATTTTCGCCTA]




>consensus_8888#2
TGCAGGGTTACTCGAGGCGTGATCGCTGACGGGGGCCGCACCGCCGCGTGGAGCAGCCGC
TCCGACTCCGAGCCATACTTGGTACATTCCCCATATTAGGATGTTGCGTGGCTGGACATC
TTCAAGGTTCCCATTGGAGTCTAGAATGTTGCGCATTCCTTGTGTTGTTTGACTCTTTAA
TAGGACTGCTGCTTCATGCGTGTAATCATGCCAAGGAGTGGGGATGAACAGAAGAAAGGA
GTACTCTCATATTCCGGCGGGCTGTGAAGAAGTGGGGTTAAAGCACCAAAGATTAAGACG
GTATCCAGGATTCGACACGTCGGTGAGGCTACCTTCAAGTCTGGAGTGGCTCGAAGACCG
AGGAATATCCTGTCTGTTGCAAAGACCTAGCAATACTTGATGATGAATGTATACATGTTC
TTTTAAGAGAACAAATTACAGAGACAAGGATTGGAAGGTCCATGGACGTCAAAAGGTAGG
AACTTGCAGTGGTTGTCTACCGGAGGGTGTTTCGCTAGGTGAGGGGCGGCAGGCACAGAC
CAGTGTGAAGAAAGACCTCAGGTCGCCGCCCTGAACCTCGACGCGCGGCTTGGACACGAC
CGCCGACGGGAAGAACTCGTGGCCGTTGAACACCTGCTTGTTGGAGCTGTAGGTCGCCGT
CATCTTCACCGTGGGGTTGAAGTTGTCGATGACCTCTCCGATCACCTTCCCGACGACGAG
AGGCTCCAGCACCCTAGACATGGTGGCTAGCTGCAAGAGGCTAATCTCTTGAGAACGTAC
TGAAGGGAGAGAAGGTGAATACCGGTGATGAGATCGTGAGGGTGTGTGTATAGTAGCTCG
TGGTGTGTAGGTAAACACGAGATAAACAGTCTCGAGTGGTTGCTGGTCTTGCTGATGACA
ATGGGAGGGCCGGCCGGGGCTCTATTTATAGCTGCGTGGAGCCGATGGATCGAACTGATA
AGGAAAATGTATAGACAATGTAAAGTATTAGAAAATATGTAAATTGTCCCATCTTCATTT
TCGCCTA

consensusID : consensus_8888#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 585
fasta sequence

                              [CCCTCTTATGGCCCTCAAGCGGGGATTAAATCACTTGTAAAAATAATGATNTATATTTACCCAGTGAAGNTCCTCCCCTCAGTTNAGGGGCGGCAGNCACAGACCAGTGTGAAGAAAGACCTCAGGTCGCCGCCCTGAACCTCGANTCGCGGCTTGGACACGACCGCCGACGGGAATANCTCGTGGCCGTTGAACACCTGCTTGTTGGAGCTGTAGGTCGCCGTCATCTTCACCGTGGGGTTGAAGTTGTCGATGACCTCTCCGATCACCTTCCCGACGACGAGAGGCTCCAGCACCCTAGACATGGTGGCTAGCTGCAAGAGGCTAATCTCTTGAGAACGTACTGAAGGGAGAGAAGGTGAATACCGGTGATGAGATCGAGAGGGTGTGTGTATAGTAGCTCGTGGTGTGTAGGTAAACACGAGATAAACAGTCTCGAGTGGTTGCTGGTCTTGCTGATGACAATGGGAGGGCCGGCCGGGGCTCTATTTATAGCTGCGTGGAGCCGATGGATCGAACTGATAAGGAAAATGTATAAACAATGTAAAGTATTAGAAAATATGTAAATTGTCCCATCTTCAAAAA]

[+] EMBL AU093964             [CCCTCTTATGGCCCTCAAGCGGGGATTAAATCACTTGTAAAAATAATGATNTATATTTACCCAGTGAAGNTCCTCCCCTCAGTTNAGGGGCGGCAGNCACAGACCAGTGTGAAGAAAGACCTCAGGTCGCCGCCCTGAACCTCGANTCGCGGCTTGGACACGACCGCCGACGGGAATANCTCGTGGCCGTTGAACACCTGCTTGTTGGAGCTGTAGGTCGCCGTCATCTTCACCGTGGGGTTGAAGTTGTCGATGACCTCTCCGATCACCTTCCCGACGACGAGAGGCTCCAGCACCCTAGACATGGTGGCTAGCTGCAAGAGGCTAATCTCTTGAGAACGTACTGAAGGGAGAGAAGGTGAATACCGGTGATGAGATCGAGAGGGTGTGTGTATAGTAGCTCGTGGTGTGTAGGTAAACACGAGATAAACAGTCTCGAGTGGTTGCTGGTCTTGCTGATGACAATGGGAGGGCCGGCCGGGGCTCTATTTATAGCTGCGTGGAGCCGATGGATCGAACTGATAAGGAAAATGTATAAACAATGTAAAGTATTAGAAAATATGTAAATTGTCCCATCTTCAAAAA]




>consensus_8888#3
CCCTCTTATGGCCCTCAAGCGGGGATTAAATCACTTGTAAAAATAATGATNTATATTTAC
CCAGTGAAGNTCCTCCCCTCAGTTNAGGGGCGGCAGNCACAGACCAGTGTGAAGAAAGAC
CTCAGGTCGCCGCCCTGAACCTCGANTCGCGGCTTGGACACGACCGCCGACGGGAATANC
TCGTGGCCGTTGAACACCTGCTTGTTGGAGCTGTAGGTCGCCGTCATCTTCACCGTGGGG
TTGAAGTTGTCGATGACCTCTCCGATCACCTTCCCGACGACGAGAGGCTCCAGCACCCTA
GACATGGTGGCTAGCTGCAAGAGGCTAATCTCTTGAGAACGTACTGAAGGGAGAGAAGGT
GAATACCGGTGATGAGATCGAGAGGGTGTGTGTATAGTAGCTCGTGGTGTGTAGGTAAAC
ACGAGATAAACAGTCTCGAGTGGTTGCTGGTCTTGCTGATGACAATGGGAGGGCCGGCCG
GGGCTCTATTTATAGCTGCGTGGAGCCGATGGATCGAACTGATAAGGAAAATGTATAAAC
AATGTAAAGTATTAGAAAATATGTAAATTGTCCCATCTTCAAAAA

consensusID : consensus_8888#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 402
fasta sequence

                              [AGGCTACCTTCAAGTCTGGAGTGGCTCGAAGACCGAGGAATATCCTGTCTGTTGCAAAGACCTAGCAATACTTGATGATGAATGTATACATGTTCTTTTAAGAGAACAAATTACAGCGACAAGGATTGGAAGGTCCATGGACGTCAAAAGGTAGGAACTTGCAGTGGTTGTCTACCGGAGGGTGTTTCGCTAGGAGCCATCTATGGCCTCAGCGGGGATTAATTACTTGTAAAATAATGATATATATTTACCAGTGGAGGTGCTCCCTCAGGTGANGGGGCCGGCANGCACAGACCAGTNTTAAGAAAAGACCTCANGTCGCCGCCCTGAACCTCGACTCGCGGCTTGGACAAGAACGCCGAGGGGAATACTCGTGGGCCGTTGAACACCTTCTTTTTTGGA]

[+] EMBL C72334               [AGGCTACCTTCAAGTCTGGAGTGGCTCGAAGACCGAGGAATATCCTGTCTGTTGCAAAGACCTAGCAATACTTGATGATGAATGTATACATGTTCTTTTAAGAGAACAAATTACAGCGACAAGGATTGGAAGGTCCATGGACGTCAAAAGGTAGGAACTTGCAGTGGTTGTCTACCGGAGGGTGTTTCGCTAGGAGCCATCTATGGCCTCAGCGGGGATTAATTACTTGTAAAATAATGATATATATTTACCAGTGGAGGTGCTCCCTCAGGTGANGGGGCCGGCANGCACAGACCAGTNTTAAGAAAAGACCTCANGTCGCCGCCCTGAACCTCGACTCGCGGCTTGGACAAGAACGCCGAGGGGAATACTCGTGGGCCGTTGAACACCTTCTTTTTTGGA]




>consensus_8888#4
AGGCTACCTTCAAGTCTGGAGTGGCTCGAAGACCGAGGAATATCCTGTCTGTTGCAAAGA
CCTAGCAATACTTGATGATGAATGTATACATGTTCTTTTAAGAGAACAAATTACAGCGAC
AAGGATTGGAAGGTCCATGGACGTCAAAAGGTAGGAACTTGCAGTGGTTGTCTACCGGAG
GGTGTTTCGCTAGGAGCCATCTATGGCCTCAGCGGGGATTAATTACTTGTAAAATAATGA
TATATATTTACCAGTGGAGGTGCTCCCTCAGGTGANGGGGCCGGCANGCACAGACCAGTN
TTAAGAAAAGACCTCANGTCGCCGCCCTGAACCTCGACTCGCGGCTTGGACAAGAACGCC
GAGGGGAATACTCGTGGGCCGTTGAACACCTTCTTTTTTGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      CCGCGTCCCGGCCGGCTGCCGGCGCACTCACGGCGGCGATGCCCGTCGCGGCGGGGGAGG 60
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      CCATGCCTCCGCTTCCGCCTCTGCCCTGACGGACCCCCTCGCTCCCCTCCTCCAGAATCC 120
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TCTTGCGTCCACGAGACCCGCCGCGATCTCGAATTCGCCGCTCCACCCATGACCTACCTG 180
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      GCGACGTCCCAATCGTTCCAGTTTCCGATGATCGATTGCTCCCGCAACCGAAGGTTGGGG 240
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      -----------TGCAGGGTTACTCGAGGCGTGATCGCTGACGGGGGCCGCACCGCCGCGT 49
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      GGAGAGGAAGCTGCAGGGTTACTCGAGGCGTGATCGCTGACGGGGGCCGCACCGCCGCGT 300
consensus_8888#1      ACCAGCAACCACTCGAGACTGTTTATCTCGTGTTTACCTACACACCACGAGCTACTATAC 60
                                                                                  

consensus_8888#2      GGAGCAGCCGCTCCGACTCCGAGCCATACTTGGTACATTCCCCATATTAGGATGTTGCGT 109
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      GGAGCAGCCGCTCCGACTCCGAGCCATACTTGGTACATTCCCCATATTAGGATGTTGCGT 360
consensus_8888#1      ACA-CACCCTCTCGATCTCATCACCGGTATTCACCTTCTCTCCCTTCAGTACGTTCTCAA 119
                                                                                  

consensus_8888#2      GGCTGGACATCTTCAAGGTTCCCATTGGAGTCTAGAATGTTGCGCATTCCTTGTGTTGTT 169
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      GGCTGGACATCTTCAAGGTTCCCATTGGAGTCTAGAATGTTGCGCATTCCTTGTGTTGTT 420
consensus_8888#1      GAGATTAGCCTCTTGCAGCTAGCCACCATGTCTAGGGTGCTGGAGCCTCTCGTCGTCGGG 179
                                                                                  

consensus_8888#2      TGACTCTTTAATAGGACTGCTG----CTTCATGCGTGTAATCATGCCAAGGAGTGGGGAT 225
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TGACTCTTTAATAGGACTGCTG----CTTCATGCGTGTAATCATGCCAAGGAGTGGGGAT 476
consensus_8888#1      AAGGTGATCGGAGAGGTCATCGACAACTTCAACCCCACGGTGAAGATGACGGCGACCTAC 239
                                                                                  

consensus_8888#2      GAACAGAAGAAAGGAGTACTCT-------CATATTCCGGCGGGCTGTGAAGAAGTGGGGT 278
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      GAACAGAAGAAAGGAGTACTCT-------CATATTCCGGCGGGCTGTGAAGAAGTGGGGT 529
consensus_8888#1      AGCTCCAACAAGCAGGTGTTCAACGGCCACGAGTTATTCCCGTCGGCGGTCGTGTCCAAG 299
                                                                                  

consensus_8888#2      TAAAGCACCAAAGATTAAGACGGTATCCAGGA----TTCGACACGTCGGTGAGGCTACCT 334
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TAAAGCACCAAAGATTAAGACGGTATCCAGGA----TTCGACACGTCGGTGAGGCTACCT 585
consensus_8888#1      CCGCGAGTCGAGGTTCAGGGCGGCGACCTGAGGTCTTTCTTCACACTGGTTATGACAGAT 359
                                                                                  

consensus_8888#2      TCAAGTCTGGAGTGGCTCGAAGACCGAGGAATATCCTGTCTGTTGCAAAGACCTAGCAAT 394
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TCAAGTCTGGAGTGGCTCGAAGACCGAGGAATATCCTGTCTGTTGCAAAGACCTAGCAAT 645
consensus_8888#1      CCAGACGTGCCAGGGCCTAGTGATCCGTACCTGAGGGAGCACCTCCACTGGATCGTCACT 419
                                                                                  

consensus_8888#2      ACTTGATGATGAATGTATACATGTTCTTTTAAGAGAACAAATTACAGAGACAAGGATTGG 454
consensus_8888#3      ------------------------------------CCCTCTTATGGCCCTCAAG---CG 21
consensus_8888#4      --------------------------------------------AGGCTACCTTC----A 12
consensus_8888#0      ACTTGATGATGAGTGTATACATGTTCTTTTAAGAGAACAAATTACAGCGACAAGGATTGG 705
consensus_8888#1      GATATTCCTGGCACCACTGATGCTTCCTTTGGGAGGGAGGTGGTGAGCTACGAGAGCCCG 479
                                                                    *             

consensus_8888#2      AAGGTC--CATGGACGTCAAAAGGTA-GGAACTTGCAGTGGTTGTCTACCG-GAGGGTGT 510
consensus_8888#3      GGGATT--AAATCACTTGTAAAAATA-ATGATNTATAT---TTACCCAGTG-AAGNTCCT 74
consensus_8888#4      AGTCTG--GAGTGGCTCGAAGACCGA-GGAATATCC------TGTCTGTTGCAAAGACCT 63
consensus_8888#0      AAGGTC--CATGGACGTCAAAAGGTACGTAACACATGTA---CTTTCGTCCTATTTCTTT 760
consensus_8888#1      AAGCCCAACATTGGCATCCACAGGTT-----CGTCCTCGTGCTGTTCAAGCAGAAGCGCC 534
                               *    *    * *                                      

consensus_8888#2      TTCGCTAGGTGAGG--GGCGGCAGGCACAGACCAGTGTGAAGAAAGACCTCAGGTCGCCG 568
consensus_8888#3      CCCCTCAGTTNAGG--GGCGGCAGNCACAGACCAGTGTGAAGAAAGACCTCAGGTCGCCG 132
consensus_8888#4      AGCAATACTTGATG--ATGAATGTATACATGTTCTTTTAAGAGAA-----CAAATTACAG 116
consensus_8888#0      CCTGGACATGTTTG--CTTGCTTGATGTATATGCTCTAATAGTAAG--CTAGGATTCCAG 816
consensus_8888#1      GTCAGGCGGTGACCCCGCCATCCTCCAGGGACTACTTCAGCACCCGCCGCTTCGCCGCCG 594
                                                                               * *

consensus_8888#2      CCCTGAACCTCGACGCGCGGCTTGGACACGACCGCCG-ACGGGAAGAACTCGTGGCCGTT 627
consensus_8888#3      CCCTGAACCTCGANTCGCGGCTTGGACACGACCGCCG-ACGGGAATANCTCGTGGCCGTT 191
consensus_8888#4      CGACAAGGATTGGAAGGTC-CATGGACGTCA-----A-AAGGTAGGAACTTGCAGTGGTT 169
consensus_8888#0      ---TGAATATCAATGCCTTTCTTCGTTCTTCTAATGGTACATGTTTAATCCATGGT-ACT 872
consensus_8888#1      ACAACGACCTCGGCCTCCC-CGTCGCCGCCGTCTACTTCAACGCGCAGCGAGAGACGGCC 653
                               *          * * *                     *             

consensus_8888#2      GAACACCTGCTTGT-TGGAGCTGTAGGTCGCCGTCATCTTCACC----GTGGGGTTGAAG 682
consensus_8888#3      GAACACCTGCTTGT-TGGAGCTGTAGGTCGCCGTCATCTTCACC----GTGGGGTTGAAG 246
consensus_8888#4      GTCTACCGGAGGGTGTTTCGCTAGGAGCCATCTATGGCCTCA------GCGGGGATTAAT 223
consensus_8888#0      ATATATCAGTTAAT-TTTATAAAGAAATCTACGATAACTAAAGCAAAAATACGATCGATA 931
consensus_8888#1      GCTCGCC-GCCGCTAATTAACCA--AACTGCCAAAAACCAAATTA--AGCCCCTCTTGCA 708
                            * *    *                 *     *   *                  

consensus_8888#2      TTGTCGATGA-----CCTCTCCGATCACCTTCCCGACGACGAGAGGCTCCAGCACCCTAG 737
consensus_8888#3      TTGTCGATGA-----CCTCTCCGATCACCTTCCCGACGACGAGAGGCTCCAGCACCCTAG 301
consensus_8888#4      TACTTGTAAA-----ATAATGATATATATTTACCAGTG--GAGGTGCTCC-----CTCAG 271
consensus_8888#0      ACATTGAGAATTAAGACACTTTAATGATTACTCCAAAACCTAGTTCTCTCTGT-CTCTCT 990
consensus_8888#1      GGCATGCAATATGC-CTCCTGCAATATTAATTGCAGATGCAGCTAGCCTT-----CCAAA 762
                           *             *   **        *                          

consensus_8888#2      ACATGGTGGCTAGCTGCAAGAGGCTAATCTCTTGAGAACGTACTGAAGGGAGAGAAGGTG 797
consensus_8888#3      ACATGGTGGCTAGCTGCAAGAGGCTAATCTCTTGAGAACGTACTGAAGGGAGAGAAGGTG 361
consensus_8888#4      GTGANGGGGCCGGCANGCACAGACCAGTNT--TAAGAAAAGACCTCANGTCGCCGCCCTG 329
consensus_8888#0      CTAGTTAGTCTGGAGGTTGCAGATTGCATTGTGCATGCAAGGCTGCAAGAGACTAGTGTA 1050
consensus_8888#1      CTATATATTGCAACTAATTAAGAATGGACTACTACATATATAATCTAGGGATCGATTGAG 822
                                          **       *                * *           

consensus_8888#2      -AATACCGGTGATGAGATCGTGAGGGTGTGTGTATAGTAGCTCG---TGGTGTG---TAG 850
consensus_8888#3      -AATACCGGTGATGAGATCGAGAGGGTGTGTGTATAGTAGCTCG---TGGTGTG---TAG 414
consensus_8888#4      -AACCTCGACTCGCGGCTTGGACAAGAACGCCGAGGGGAATAC----TCGTGGG---CCG 381
consensus_8888#0      -TTTTCCCCTTATCATCCTAGCTAGATATAT-TATAGTTCTATAGTTCTGTATA---CAG 1105
consensus_8888#1      CTAGATCACCTAGTGGCATATATATATCAGCCACTATTAGCTTAGCCATGTATGAACCAA 882
                            *                                          **         

consensus_8888#2      GTAAACACGAGA-TAAACAGTCTCGAGTGG-TTGCTGGTCTTGCTGATGACAATGGGAGG 908
consensus_8888#3      GTAAACACGAGA-TAAACAGTCTCGAGTGG-TTGCTGGTCTTGCTGATGACAATGGGAGG 472
consensus_8888#4      TTGAACACCTT------CTTTTTTGGA--------------------------------- 402
consensus_8888#0      TTTGCTGCATTAACGAGCAGACTGCTCTACCTTAATTTGTTCGGCAATATTAACCATTTT 1165
consensus_8888#1      ATAAGAACTCGGTGCAGCAAGCGCGAGCCA-CTGTTTAGTTCGTCAGTGTAGTTAATTGG 941
                       *     *         *                                          

consensus_8888#2      GCCGGCCGGGGCTCTATTTATAGCTGCGTGGAGCCGATGGATCGAACTGATAAGGAAAAT 968
consensus_8888#3      GCCGGCCGGGGCTCTATTTATAGCTGCGTGGAGCCGATGGATCGAACTGATAAGGAAAAT 532
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      ACCCGGCAAAACCATCCCATTAAATAATTGTAATTGTATACTCTCTTCGGTCATAAATAT 1225
consensus_8888#1      TATATATGCCTATATATCCGTGTCTGCAAGAGCTAGGTGAGACACGTGAGACGTACTCGC 1001
                                                                                  

consensus_8888#2      GT-ATAGACAATGTAAAGTATTAGAAAATATGTAA--ATTGTCCCATCTTCATTTTCGCC 1025
consensus_8888#3      GT-ATAAACAATGTAAAGTATTAGAAAATATGTAA--ATTGTCCCATCTTCAAAAA---- 585
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TTGATATTTAAAACAAAATCTTGTGAAACTTTTGACCATTAATTGTTTTCTCAAAATGCT 1285
consensus_8888#1      CTCGTACGTGTTGCACTATAGCTTGAGTCAATCTC---AAGCTCCTGCGTATATCCAGCT 1058
                                                                                  

consensus_8888#2      TA---------------------------------------------------------- 1027
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TTGTTTAAATGCATCAACTTATTCTAATATAAGATTGATGGGCAAAGTCTTAAAAATTTG 1345
consensus_8888#1      GAAGATCGCAATGTTCGCCGGCGGCGAAACAGCTGGTGCTGGGAGAGGCGAAAGGCGATG 1118
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      ACAATTTTAGTTCCATTTATGGCCAAAACTTGTGCAACCATTTACTTGCTCAATTTTTAA 1405
consensus_8888#1      CATAATGCATTGTGTTGACTGGGAGCAGTTTAAATTGACGTGTCGGGCGGCGAAGGCAGG 1178
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      ATATATAACACTGTTGATTTTTAGATATGATATTTAACCATTCATCTTATTAAAAAAATA 1465
consensus_8888#1      AAGAGGAAGTGGCCATGGCTCTCTAGTACTCACTTTGTCAGTTACAAGCTACTATATTTA 1238
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TGATGCAAATATTTTAAAAAAATATAAGTCACGCTTAACGTATTTTGTGTTAAACATCAA 1525
consensus_8888#1      TCCTGTTATGTGCGTGTGTGAGTGGCTGCAGCTAGCTATATATGCACTTTTGCAGCTTGC 1298
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      ATTTATGACTGGAGGGAGCAATTGATTCATTCACCTGGCTACAGTACGCAGTACGTTCCG 1585
consensus_8888#1      AGTAACGTGTTTGTACTTTTATGGCATGATCCT--------------------------- 1331
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TGTGACAATTTTCGTTTCATTTTGTTCATTTGCATTTTATATTAATTCACGACAGCACAA 1645
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      AATCAGTTATTATATCTGTTATTTTCCATACAAGGTTTGTTTTTCTTGACTTTGCAAGGT 1705
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TATAGCTAGACATAATACTTTTTTAATAAATTCTACGTTTTACCATTGACAAGTAATTGG 1765
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TTCTACAAATTACCATCAACGAATCTAATTTTTACGAAATACCATCACACACGCACTTTT 1825
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      CTTTTTCTTTTTCATCGTTATTAATGGACTATTAGTTGATTGACTTAGATAAACCCCATA 1885
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TAAAAAGTTCACTTTACCCTAAAATATAAGGACTGCCTAAGCTGATATTGCACTTCTAAG 1945
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      GGTGGTCTCTAGAACACCACAAAATAGATTTTTCTCCCGCCTCCTCTATATACTAGTACT 2005
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      AAGTACTTATATAGTACATGGGGAACCTTGAGTAAAGGGATCGGACAAATCTATTATAAC 2065
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TTATTAAAGGAATAGTAAAAGGAGCATTCACGTTCACTCTCACAGCTTAGAAATTCTCAC 2125
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      ATTAATCGGGGAAAAAGAAAAAACAGAGTCCATATAGGAATACAATTTAAAAACAGCTGA 2185
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      AACTCGGAATTTTAAATAGGGAATATAGAAAAAAGAGACTAGAGTCCATACCGGTATACA 2245
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      ATTTTGAACTGTTTGAAATTCAGAATTAAAAAATAGGAAAACTAAAACTAGAGGTCAGAG 2305
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TCCCTATAGAAATACAATTAATAAGAAATATTGAAAGAAGATTATATAGCCCATATAGAA 2365
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TATAATTTAGAAAAGAATAAAATTCGGAATTAAAAAATAAAAAAATATTAAAAGATGAGT 2425
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#0      TTAGAGTCCATATAGAAATACAATTAGAAACAACGAAAATTTGGAAATTAAAAAAGGAAT 2485
consensus_8888#1      ------------------------------------------------------------
                                                                                  

consensus_8888#2      ----------------------------------------------
consensus_8888#3      ----------------------------------------------
consensus_8888#4      ----------------------------------------------
consensus_8888#0      ATTGAAAGAAGATTCTAGAGTTCATATAGGAATTTAGAACAAACTG 2531
consensus_8888#1      ----------------------------------------------