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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8890#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2698 fasta sequence
[GTCGGAAGGTTGTTCAAGCAGTACCTGCTGCTATTGCTGGTGAACCAGATGGCCGCAGCATTGTTCAGATTTATTGCAGCATTGGGCAGGACCATGGTTGTCGCGAATACATTGGCGTCATTTGCTCTACTAGTGCTCCTTGTGCTCAGTGGATTTATCCTATCACACCATGATGTGAAAAAATGGTGGATCTGGGGCTACTGGATCTCACCTCTCCAGTATGCGATGAACGCCATCGCAGTGAATGAGTTCCTTGGACACAAGTGGAACCGCCTTGTCCAAGGGACCAATACAACTTTAGGAATTGAAGTGCTCAAGTCCAGGGGGATGTTCACTGAGGCAAAATGGTACTGGATTGGCGTCGGTGCACTCTTCGGATACGTCATTGTGTTCAACATCCTATTCACCATCGCTCTAGGCTACCTTAAACCATCGGGAAAAGCTCAGCAAATTCTTTCAGAGGAAGCACTGAAGGAAAAGCACGCCAATATCACCGGAGAAACGATCAATGATCCAAGAAACTCTGCATCTTCAGGACAAACTACCAACACAAGGAGAAATGCTGCACCAGGTGAGGCAAGCGAGAACAGGAGAGGAATGGTGCTCCCTTTCGCGCCGCTTGCTGTTGCCTTCAACAACATCAGATACTCTGTCGACATGCCTCCGGAAATGAAAGCACAGGGTGTGGATCAAGACAGGCTGCTTCTGCTGAAGGGAGTCAGTGGCAGCTTCAGGCCTGGGGTCCTCACTGCACTGATGGGAGTCAGTGGTGCTGGCAAGACAACACTGATGGATGTGTTGGCCGGCAGGAAGACGGGAGGCTACATCGAAGGTGACATCTCGATCTCTGGCTACCCGAAGAAGCAGGAAACCTTCGCTCGGGTCTCTGGTTACTGTGAACAGAATGACATCCACTCGCCAAATGTGACTGTTTATGAGTCCCTGGCTTACTCTGCTTGGCTCAGGCTGCCCTCTGATGTTGATTCAGAAACAAGAAAGATGTTTATAGAGCAAGTGATGGAGCTGGTAGAGCTGAATCCACTGAGGGATGCGCTTGTTGGGCTACCTGGAGTAAATGGCCTGTCAACCGAGCAAAGAAAGAGGCTGACGATCGCTGTTGAGCTCGTCGCAAATCCTTCGATAATATTCATGGATGAGCCTACATCTGGCCTTGATGCAAGGGCGGCAGCAATTGTCATGAGGACGGTGAGGAACACCGTTGACACAGGCAGGACTGTTGTCTGCACCATCCACCAGCCTAGCATTGACATTTTTGAGGCCTTCGATGAGCTGTTCCTGATGAAAAGAGGTGGAGAGGAGATATACGTGGGTCCTCTAGGACACCATTCTTGTGACCTTATTGAATACTTTGAGGGAGTCGAAGGGGTCAGCAAGATCAAACCAGGCTACAACCCGGCAACATGGATGCTGGAAGTAACCACACTGGCACAGGAAGACGTACTGGGGATCAGCTTTACAGATGTCTACAAGAACTCAGATCTCTACCAGAGAAACCAGAGCTTGATCAAGGGCATCAGCAGGCCACCACAGGGGTCCAAGGACCTCTTCTTCCCAACACAATTCTCCCAGAGCTTCTCCACCCAGTGCATGGCCTGCCTCTGGAAGCAGAACCTCTCCTACTGGAGGAACCCTCCCTACACCGTCGTCCGCTTCTTCTTCTCCCTCATCGTCGCCCTCATGTTCGGCACCATTTTCTGGCGCCTCGGCAGCAAAAGATCGAGGCAGCAAGACCTGTTCAATGCCATGGGGTCGATGTACGCGGCGGTGCTGTTCATGGGGATCTCCTACTCGTCGTCGGTGCAGCCGGTCGTCGCCGTCGAGCGGACGGTGTTCTACCGGGAGAGGGCCGCCGGGATGTACTCTGCATTGCCATACGCCTTCGGACAGGTGGTGGTGGAGCTGCCGTACGTGCTGGTGCAGTCGGCGGTGTACGGGGTGATCGTGTACGCCATGATCGGCTTCGAGTGGGAGGCCAAGAAGTTCTTCTGGTACCTCTACTTCATGTACTTCACGCTGCTCTACTTCACCTTCTACGGCATGCTCGCCGTCGGCCTCACCCCGAGCTACAACATCGCCTCCATCGTCTCCTCCTTCTTCTACGGCATCTGGAACCTCTTCTCCGGCTTCGTCATCCCCCGCCCGAGCATGCCGGTGTGGTGGAGGTGGTACTCGTGGGCGTGCCCGGTGTCGTGGACGCTGTACGGGCTGGTGGCGTCGCAGTTCGGCGACCTGAAGGAGCCGCTCCGCGACACCGGCGTCCCCATTGACGTCTTCCTTAGGGAGTACTTCGGCTTCAAGCACGACTTCCTCGGTGTCGTCGCCGTTGCTG-TTGCGGGGTTCGCCACGCTCTTCGCCGTCTCCTTCTCGCTCTCCATCA-AGATGCTTAACTTCCAGAGGAGGTGATGATCGATTTTTGCTAACTCAGACCTGATCGATTACCCACTTCCAATGTAACAG----TTTTTTTTTTCCTTTTTTTCAACTCTATTTTGGTTTTGTAACAAAATTCGTAGTATAGTGCAGTCAGAAATGAAGCAA-ACAGGAGTATATATACA-AAGCTGATAGTGCAGATAATTTGTTTTACATGCATGAAATCTGTTAATTTTGATTCTATTTTGTACATGTAGTATTAATTGAAAAGAAATGAAAGTCAGCC-GGATTTTGTCTTTC----AAAAAAAAGA]
[+] EMBL CB667499 [GTCGGAAGGTTGTTCAAGCAGTACCTGCTGCTATTGCTGGTGAACCAGATGGCCGCAGCATTGTTCAGATTTATTGCAGCATTGGGCAGGACCATGGTTGTCGCGAATACATTGGCGTCATTTGCTCTACTAGTGCTCCTTGTGCTCAGTGGATTTATCCTATCACACCATGATGTGAAAAAATGGTGGATCTGGGGCTACTGGATCTCACCTCTCCAGTATGCGATGAACGCCATCGCAGTGAATGAGTTCCTTGGACACAAGTGGAACCGCCTTGTCCAAGGGACCAATACAACTTTAGGAATTGAAGTGCTCAAGTCCAGGGGGATGTTCACTGAGGCAAAATGGTACTGGATTGGCGTCGGTGCACTCTTCGGATACGTCATTGTGTTCAACATCCTATTCACCATCGCTCTAGGCTACCTTAAACCATCGGGAAAAGCTCAGCAAATTCTTTCAGAGGAAGCACTGAAGGAAAAGCACGCCAATATCACCGGAGAAACGATCAATGATCCAAGAAACTCTGCATCTTCAGGACAAACTACCAACACAAGGAGAAATGCTGCACCAGGTGAGGCAAGCGAGAACAGGAGAGGAATGGTGCTCCCTTTCGCGCCGCTTGCTGTTGCCTTCAACAACATCAGATACTCTGTCGACATGCCTCCGGAAATGAAAGCACAGGGTGTGGATCAAGACAGGCTGCTTCTGCTGAAGGGAGTCAGTGGCAGCTTCAGGCCTGGGGTCCTCACTGCACTGATGGGAGTCAGTGGTGCTGGCAAGACAACACTGATGGAT ]
[+] EMBL AK100858 [ GTGCTCAGTGGATTTATCCTATCACACCATGATGTGAAAAAATGGTGGATCTGGGGCTACTGGATCTCACCTCTCCAGTATGCGATGAACGCCATCGCAGTGAATGAGTTCCTTGGACACAAGTGGAACCGCCTTGTCCAAGGGACCAATACAACTTTAGGAATTGAAGTGCTCAAGTCCAGGGGGATGTTCACTGAGGCAAAATGGTACTGGATTGGCGTCGGTGCACTCTTCGGATACGTCATTGTGTTCAACATCCTATTCACCATCGCTCTAGGCTACCTTAAACCATCGGGAAAAGCTCAGCAAATTCTTTCAGAGGAAGCACTGAAGGAAAAGCACGCCAATATCACCGGAGAAACGATCAATGATCCAAGAAACTCTGCATCTTCAGGACAAACTACCAACACAAGGAGAAATGCTGCACCAGGTGAGGCAAGCGAGAACAGGAGAGGAATGGTGCTCCCTTTCGCGCCGCTTGCTGTTGCCTTCAACAACATCAGATACTCTGTCGACATGCCTCCGGAAATGAAAGCACAGGGTGTGGATCAAGACAGGCTGCTTCTGCTGAAGGGAGTCAGTGGCAGCTTCAGGCCTGGGGTCCTCACTGCACTGATGGGAGTCAGTGGTGCTGGCAAGACAACACTGATGGATGTGTTGGCCGGCAGGAAGACGGGAGGCTACATCGAAGGTGACATCTCGATCTCTGGCTACCCGAAGAAGCAGGAAACCTTCGCTCGGGTCTCTGGTTACTGTGAACAGAATGACATCCACTCGCCAAATGTGACTGTTTATGAGTCCCTGGCTTACTCTGCTTGGCTCAGGCTGCCCTCTGATGTTGATTCAGAAACAAGAAAGATGTTTATAGAGCAAGTGATGGAGCTGGTAGAGCTGAATCCACTGAGGGATGCGCTTGTTGGGCTACCTGGAGTAAATGGCCTGTCAACCGAGCAAAGAAAGAGGCTGACGATCGCTGTTGAGCTCGTCGCAAATCCTTCGATAATATTCATGGATGAGCCTACATCTGGCCTTGATGCAAGGGCGGCAGCAATTGTCATGAGGACGGTGAGGAACACCGTTGACACAGGCAGGACTGTTGTCTGCACCATCCACCAGCCTAGCATTGACATTTTTGAGGCCTTCGATGAGCTGTTCCTGATGAAAAGAGGTGGAGAGGAGATATACGTGGGTCCTCTAGGACACCATTCTTGTGACCTTATTGAATACTTTGAGGGAGTCGAAGGGGTCAGCAAGATCAAACCAGGCTACAACCCGGCAACATGGATGCTGGAAGTAACCACACTGGCACAGGAAGACGTACTGGGGATCAGCTTTACAGATGTCTACAAGAACTCAGATCTCTACCAGAGAAACCAGAGCTTGATCAAGGGCATCAGCAGGCCACCACAGGGGTCCAAGGACCTCTTCTTCCCAACACAATTCTCCCAGAGCTTCTCCACCCAGTGCATGGCCTGCCTCTGGAAGCAGAACCTCTCCTACTGGAGGAACCCTCCCTACACCGTCGTCCGCTTCTTCTTCTCCCTCATCGTCGCCCTCATGTTCGGCACCATTTTCTGGCGCCTCGGCAGCAAAAGATCGAGGCAGCAAGACCTGTTCAATGCCATGGGGTCGATGTACGCGGCGGTGCTGTTCATGGGGATCTCCTACTCGTCGTCGGTGCAGCCGGTCGTCGCCGTCGAGCGGACGGTGTTCTACCGGGAGAGGGCCGCCGGGATGTACTCTGCATTGCCATACGCCTTCGGACAGGTGGTGGTGGAGCTGCCGTACGTGCTGGTGCAGTCGGCGGTGTACGGGGTGATCGTGTACGCCATGATCGGCTTCGAGTGGGAGGCCAAGAAGTTCTTCTGGTACCTCTACTTCATGTACTTCACGCTGCTCTACTTCACCTTCTACGGCATGCTCGCCGTCGGCCTCACCCCGAGCTACAACATCGCCTCCATCGTCTCCTCCTTCTTCTACGGCATCTGGAACCTCTTCTCCGGCTTCGTCATCCCCCGCCCGAGCATGCCGGTGTGGTGGAGGTGGTACTCGTGGGCGTGCCCGGTGTCGTGGACGCTGTACGGGCTGGTGGCGTCGCAGTTCGGCGACCTGAAGGAGCCGCTCCGCGACACCGGCGTCCCCATTGACGTCTTCCTTAGGGAGTACTTCGGCTTCAAGCACGACTTCCTCGGTGTCGTCGCCGTTGCTG TTGCGGGGTTCGCCACGCTCTTCGCCGTCTCCTTCTCGCTCTCCATCA AGATGCTTAACTTCCAGAGGAGGTGATGATCGATTTTTGCTAACTCAGACCTGATCGATTACCCACTTCCAATGTAACAG TTTTTTTTTTCCTTTTTTTCAACTCTATTTTGGTTTTGTAACAAAATTCGTAGTATAGTGCAGTCAGAAATGAAGCAA ACAGGAGTATATATACA AAGCTGATAGTGCAGATAATTTGTTTTACATGCATGAAATCTGTTAATTTTGATTCTATTTTGTACATGTAGTATTAATTGAAAAGA ]
[+] EMBL CB653435 [ AGACGGCAGGCTACATCGAAGGTGACATCTCGATCTCTGGCTACCCGAAGAAGCAGGAAACCTTCGCTCGGGTCTCTGGTTACTGAGAACAGAATGACATCCACTCGCCAAATGTGACTGTTTATGAGTCCCTGGCTTACTCTGCTTGGCTCAGGCTGCCCTCTGATGTTGATTCAGAAACAAGAAAGATGTTTATAGAGCAAGTGATGGAGCTGGTAGAGCTGAATCCACTGAGGGATGCGCTTGTTGGGCTACCTGGAGTAAATGGCCTGTCAACCGAGCAAAGAAAGAGGCTGACGATCGCTGTTGAGCTCGTCGCAAATCCTTCGATAATATTCATGGATGAGCCTACATCTGGCCTTGATGCAAGGGCGGCAGCAATTGTCATGAGGACGGTGAGGAACACCGTTGACACAGGCAGGACTGTTGTCTGCACCATCCACCAGCCTAGCATTGACATTTTTGAGGCCTTCGATGAGCTGTTCCTGATGAAAAGAGGTGGAGAGGAGATATACGTGGGTCCTCTAGGACACCATTCTTGTGACCTTATTGAATACTTTGAGGGAGTCGAAGGGGTCAGCAAGATCAAACCAGGCTACAACCCGGCAACATGGATGCTGGAAGTAACCACACTGGCACAGGAAGACGTACTGGGGATCAGCTTTACAGATGTCTACAAGAA ]
[-] EMBL CB667500 [ ACGCCTTCGGACAGGTGGTGGTGGAGCTGCCGTACGTGCTGGTGCAGTCGGCGGTGTACGGGGTGATCGTGTACGCCATGATCGGCTTCGAGTGGGAGGCCAAGAAGTTCTTCTGGTACCTCTACTTCATGTACTTCACGCTGCTCTACTTCACCTTCTACGGCATGCTCGCCGTCGGCCTCACCCCGAGCTACAACATCGCCTCCATCGTCTCCTCCTTCTTNTACGGCATCTGGAACCTCTTCTCCGGCTTCGTCATCCCCCGCCCGAGCATGCCGGTGTGGTGGAGGTGGTACTCGTGGGCGTGCCCGGTGTCGTGGACGCTGTACGGGCTGGTGGCGTCGCAGTTCGGCGACCTGAAGGAGCCGCTCCGCGACACCGGCGTCCCCATTGACGTCTTCCTTAGGGAGTACTTCGGCTTCAAGCACGACTTCCTCGGTGTCGTCGCCGTTGCTG TTGCGGGGTTCGCCACGCTCTTCGCCGTCTCCTTCTCGCTCTCCATCA AGATGCTTAACTTCCAGAGGAGGTGATGATCGATTTTTGCTAACTCAGACCTGATCGATTACCCACTTCCAATGTAACAG TTTTTTTTTTCCTTTTTTTCAACTCTATTTTGGTTTTGTAACAAAATTCGTAGTATAGTGCAGTCAGAAATGAAGCAA ACAGGAGTATATATACA AAGCTGATAGTGCAGATAATTTGTTTTACATGCATGAAATCTGTTAATTTTGATTCTATTTTGTACATGTAGTATTAATTGAAAAGAAATGAAAGTCAGCCGGGATTTTGTCTTTC AAAAAAAAGA]
[+] EMBL BI812008 [ CATCTGG ACCTCTTCTCCGGCTTCGTCAT CCCCGCCCGAGCATGCCGGTGTGGTGGAGGTGGTACTCGT GGCGTGCCCGGT TCGTGGAC CTGTAC GGCTGGTGGC TC CAGTTC GCGACCTGAAGGA CCGCTCCGCGACACCGGCGTCCCCATTGACGTCTTCCTTAGGGAGTACTTCGGCTTCAAGCACGACTTCCTCGGTGTCGTCGCCGTTGCTG TTGCGGGGTTCGCCACGCTCTTCGCCGTCTCCTTCTCGCTCTCCATCA AGATGCTTAACTTCCAGAGGAGGTGATGATCGATTTTTGCTAACTCAGACCTGATCGATTACCCACTTCCCATGTAACAGTTT TTTTTTTTTTCCTTTTTTTCAACTCTATTTTGGTTTTGTAACAAAATACGTAGTATAGTGCAGTCAGAAATGAAGCAACAC GGAGTATATATAC AAGCTGATAGTGCAGATAATTTGTTTTACATGCATGAAATCTGTTAATTTTGATTCTATTTTGTACATGTAGTATTAATTGAAAAGAAATGAAAGTCAGCC GGATTTTGTCTTTA AAAAAA ]
[+] EMBL BI813330 [ CCGGTGT GTGGAGGTGGTACTCGTGGGCGTCCCCGGT TCGTGGACCCTGTACGGGCTGGTGGCGTC CAGTTCGGCGACCTGAAGGAGCCGCTCCGCGACACCGGCGTCCCCATTGACGTCTTCCTTAGGGAGTACTTCGGCTTCAAGCCCGACTTCCTCGGTGTCGTCGCCGTTGCTGTTTGCGGGGTTCGCCACGCTCTTC CCGTCTCCTTCTCGCTCTCCATCACAGATGCTTAACTTCCAGAGGAGGTGATGATCGATTTTTGCTAACTCAGACCTGATCGATTACCCACTTCCCATGTAACCGTTTTTTTTTTTTTTCCTTTTTTTCAACTCTATTTTGGTTTTGTAACCAAATACGTAGTATAGTCCAGTCAGAAATGAAGCCA ACCGGAGTATATATACACAAGCTGATAGTGCAGATAATTTGTTTTACATGCATGAAATCTGTTAATTTTGATTCTATTTTGTACATGTAGTATTAATTGAAAAGAAATGAAAGTCAGCC GGATTTTGTCTTTCTTTTAAAAAAAAaa]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||