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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8891#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1401 fasta sequence
[TTCCTCGAGCACTGTTGGCCTACTGGATCCGCTCCCGCACGTTTGCATCGCCGCTAACCTCCGCCTGGCCCCGCACGCCTGCGCCGCCGATTCCCTCCGCCTGCACCGTCGTTCTCCCCATGCCGCACCGCCGCTTCCCTCCGCCCGCTCCTCTCCCGCGCCGCCCTCTCCACCTCTCCTCACGTCCCGTCACGCCTGCCCACCTCAGCCGCAGCCCACAAGCAGGGTCCCCGATCCCGTAAACCCTAGCCTTTGCCTCGCCCTCGCTGCCTCGCTGGCTGGATCCCCACTATCTGGGCGCCGTCGATCCGTCGCCGTCTGGTCTCCATCGAGCCGCATCGCCCTCGCGTCTCCACCACACCTCGCCGTCGATTACCCGCAGTCCGGCCGCCGTCGATCCCTCGACATCTTGTGTCCGCCGCGACTCCTCTGCCCCCTCCGCAAACTCATCCGGATCACGTCTCCCTTGCTGCTCCTGTGTAAGACAAATGTGAATCTATGTTGAGTTCCATCCGGACAACTGTGGGCGAAAAGGCAAAGATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGCCAAAGATTGAAAGAAAGAGAGAAAGAGATCACAACCTGGTGGAATATCTAGCTTCAGCGGAATAGAAGGGTCTTCCATCGCGTTTGCTCAGATAACAGAAAAGTGGCGCAGTTAAGCTGGTGGATCTATGGAGAGAGATGGAGCAACTGCACCACCGCTAATGGTGAAACACAATGTGTTTGAGGAGAAGGGTCATGCTAACAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGGTTCAATCACGAAAACATGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAAACTGCACTGAACATCATTAATCTGGCATTGGCAGATTTTCAGGCCAGTGCCATAAAGCCCCTTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTAGATTGTAATCAGATGCATTTTGTGAAGGATAAAGTCATCAACAGTAAATTAATTGTGTAAAAAAGATGTATTTGTTTCATGATCATTAATTTAATTGGTGCACTTGGCAAAAAAAAAAAAAAAGGCCACATGT]
[+] EMBL AK109366 [TTCCTCGAGCACTGTTGGCCTACTGGATCCGCTCCCGCACGTTTGCATCGCCGCTAACCTCCGCCTGGCCCCGCACGCCTGCGCCGCCGATTCCCTCCGCCTGCACCGTCGTTCTCCCCATGCCGCACCGCCGCTTCCCTCCGCCCGCTCCTCTCCCGCGCCGCCCTCTCCACCTCTCCTCACGTCCCGTCACGCCTGCCCACCTCAGCCGCAGCCCACAAGCAGGGTCCCCGATCCCGTAAACCCTAGCCTTTGCCTCGCCCTCGCTGCCTCGCTGGCTGGATCCCCACTATCTGGGCGCCGTCGATCCGTCGCCGTCTGGTCTCCATCGAGCCGCATCGCCCTCGCGTCTCCACCACACCTCGCCGTCGATTACCCGCAGTCCGGCCGCCGTCGATCCCTCGACATCTTGTGTCCGCCGCGACTCCTCTGCCCCCTCCGCAAACTCATCCGGATCACGTCTCCCTTGCTGCTCCTGTGTAAGACAAATGTGAATCTATGTTGAGTTCCATCCGGACAACTGTGGGCGAAAAGGCAAAGATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGCCAAAGATTGAAAGAAAGAGAGAAAGAGATCACAACCTGGTGGAATATCTAGCTTCAGCGGAATAGAAGGGTCTTCCATCGCGTTTGCTCAGATAACAGAAAAGTGGCGCAGTTAAGCTGGTGGATCTATGGAGAGAGATGGAGCAACTGCACCACCGCTAATGGTGAAACACAATGTGTTTGAGGAGAAGGGTCATGCTAACAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGGTTCAATCACGAAAACATGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAAACTGCACTGAACATCATTAATCTGGCATTGGCAGATTTTCAGGCCAGTGCCATAAAGCCCCTTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTAGATTGTAATCAGATGCATTTTGTGAAGGATAAAGTCATCAACAGTAAATTAATTGTGTAAAAAAGATGTATTTGTTTCATGATCATTAATTTAATTGGTGCACTTGGCAAAAAAAAAAAAAAAGGCCACATGT]
consensusID : consensus_8891#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 823 fasta sequence
[CAAAGATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGATTGAAAGAAAGAGAGAAAGAGATCACAACCTGGTGGAATATCTAGCTTCAGCGGAATAGAAGGGTCTTCCATCGCGTTTGCTCAGATAACAGAAAAGTGGCGCAGTTAAGCTGGTGGATCTACGGAGAGAGATGGAGCAACTGCACCACCGCTAATGGTGAAACACAATGTGTTTGAGGAGAAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGGTTCAATCACGAAAATATGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAAACTGCACTGAACATCATTAATCTGGCATTGTCAGATTTTCAGGCCAGTGCCATAAAGCCCCTTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTTAGATTGGAATCAGATGCATTTTTGNGAAGGATAAAGCCNTCAACAGTAAATTAATTGNGTAAAAAAGATGTATTTGGTTCNAAAAAAAAAAAAAAAAAAAAAGCGGCCCG]
[+] EMBL CA767073 [CAAAGATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGATTGAAAGAAAGAGAGAAAGAGATCACAACCTGGTGGAATATCTAGCTTCAGCGGAATAGAAGGGTCTTCCATCGCGTTTGCTCAGATAACAGAAAAGTGGCGCAGTTAAGCTGGTGGATCTACGGAGAGAGATGGAGCAACTGCACCACCGCTAATGGTGAAACACAATGTGTTTGAGGAGAAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGGTTCAATCACGAAAATATGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAAACTGCACTGAACATCATTAATCTGGCATTGTCAGATTTTCAGGCCAGTGCCATAAAGCCCCTTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTTAGATTGGAATCAGATGCATTTTTGNGAAGGATAAAGCCNTCAACAGTAAATTAATTGNGTAAAAAAGATGTATTTGGTTCNAAAAAAAAAAAAAAAAAAAAAGCGGCCCG]
consensusID : consensus_8891#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 792 fasta sequence
[GGCCCCGCACGCCTGCGCCGCCGATTCCCTCCGCCTGCACCGTCGTTCTCCCCATGCCGCACCGCCGCTTCCCTCCGCCCGCTCCTCTCCCGCGCCGCCCTCTCCACCTCTCCTCACGTCCCGTCACGCCTGCCCACCTCAGCCGCAGCCCACAAGCAGGGTCCCCGATCCCGTAAACCCTAGCCTTTGCCTCGCCCTCGCTGCCTCGCTGGCTGGATCCCCACTATCTGGGCGCCGTCGATCCGTCGCCGTCTGGTCTCCATCGAGCCGCATCGCCCTCGCGTCTCCACCACACCTCGCCGTCGATTACCCGCAGTCCGGCCGCCGTCGATCCCTCGACATCTTGTGTCCGCCGCGACTCCTCTGCCCCCTCCGCAAACTCATCCGGATCACGTCTCCCTTGCTGCTCCTGTGTAAGACAAATGTGAATCTATGTTGAGTTCCATCCGGACAACTGTGGGCGAAAAGGCAAAGATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGGTAAGTGGAATTCCTCTGTTCCATAGCCAATTACCTTCTCCTCCCAAGTTATTCTCTATGTTTGGTGCCTCTCAAAAATTAAAATTAACTTAGGATTTTTTTTAATAGATCGATAGTGGCTGCACAGATTACCATGTGCGTGCAATGGACCCTATGAAATCACAATGTTTGGGAGTAAATTTAGTAAAAGATTGCTATTTCACTGTCAATGTTTGGGAGTANATTTGTGCCTGCAGAAGTTTGGTTTTATCCCCTAATGCATACGAG]
[+] EMBL CB676808 [GGCCCCGCACGCCTGCGCCGCCGATTCCCTCCGCCTGCACCGTCGTTCTCCCCATGCCGCACCGCCGCTTCCCTCCGCCCGCTCCTCTCCCGCGCCGCCCTCTCCACCTCTCCTCACGTCCCGTCACGCCTGCCCACCTCAGCCGCAGCCCACAAGCAGGGTCCCCGATCCCGTAAACCCTAGCCTTTGCCTCGCCCTCGCTGCCTCGCTGGCTGGATCCCCACTATCTGGGCGCCGTCGATCCGTCGCCGTCTGGTCTCCATCGAGCCGCATCGCCCTCGCGTCTCCACCACACCTCGCCGTCGATTACCCGCAGTCCGGCCGCCGTCGATCCCTCGACATCTTGTGTCCGCCGCGACTCCTCTGCCCCCTCCGCAAACTCATCCGGATCACGTCTCCCTTGCTGCTCCTGTGTAAGACAAATGTGAATCTATGTTGAGTTCCATCCGGACAACTGTGGGCGAAAAGGCAAAGATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGGTAAGTGGAATTCCTCTGTTCCATAGCCAATTACCTTCTCCTCCCAAGTTATTCTCTATGTTTGGTGCCTCTCAAAAATTAAAATTAACTTAGGATTTTTTTTAATAGATCGATAGTGGCTGCACAGATTACCATGTGCGTGCAATGGACCCTATGAAATCACAATGTTTGGGAGTAAATTTAGTAAAAGATTGCTATTTCACTGTCAATGTTTGGGAGTANATTTGTGCCTGCAGAAGTTTGGTTTTATCCCCTAATGCATACGAG]
consensusID : consensus_8891#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 705 fasta sequence
[TAATATAAAAAATGCTAAGAATTATGCTTGAGTTTGGACTTCTAACAATCAGATCCCTCCCTGATATAATATGTACTCTAAATGATGGTAATATAGCCAATAGTTTTAGAATGCATGTGTGGTGACCATTTAGGATTTTCATACGGTACTTATTACCTTTAGGTAACAACTTTAGCATATTGTAAGGGCTATCTGATGTGCAACTTTAGCTATCTGATCAATGCTACTATTGCAATTATCTTTGAGCTGCAAACCACAAGAAAGCTACACTGTTCAAAAAAAATCCCCTTTTCCTTATGCATAGTTGCATTACTTTCAGTATTACAAAATGATCATGCAACATTCCTCTTGTGCTTATTATGTATAACATCTTTTCTAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTAGATTGTAATCAGATGCATTTTGTGAAGGATAAAGTCATCACCAGTAAATTAATTGTGTAAAAAAGATGTATTTGTTTCAGAAGCATTAATTTAATTGGTGCACTT]
[-] EMBL CB676809 [TAATATAAAAAATGCTAAGAATTATGCTTGAGTTTGGACTTCTAACAATCAGATCCCTCCCTGATATAATATGTACTCTAAATGATGGTAATATAGCCAATAGTTTTAGAATGCATGTGTGGTGACCATTTAGGATTTTCATACGGTACTTATTACCTTTAGGTAACAACTTTAGCATATTGTAAGGGCTATCTGATGTGCAACTTTAGCTATCTGATCAATGCTACTATTGCAATTATCTTTGAGCTGCAAACCACAAGAAAGCTACACTGTTCAAAAAAAATCCCCTTTTCCTTATGCATAGTTGCATTACTTTCAGTATTACAAAATGATCATGCAACATTCCTCTTGTGCTTATTATGTATAACATCTTTTCTAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTAGATTGTAATCAGATGCATTTTGTGAAGGATAAAGTCATCACCAGTAAATTAATTGTGTAAAAAAGATGTATTTGTTTCAGAAGCATTAATTTAATTGGTGCACTT]
consensusID : consensus_8891#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 690 fasta sequence
[AAGTGGCCCAGTTAAGCTGGTGGATTTCCGGAGAGAGATGGAGCAACTGCACCCCCGCTAATGGTGAAACACAATGTGTTTGAGGAGAAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGGTTCAATCGCGAAAATATGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAAACTGCGCTGAACATCATTAATCTGGCATTGTCAGATTTTCAGGCCAGTGCCATAAAGCCCCTTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATTTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTAGATTGTAATCAGATGCATTTTGTGAAGGATAAAGTCATCAACAGTAAATTAATTGTGTAAAAAAGATGTATTTGTTTCATGATCATTAATTTAATTGGCGCACTTTGCAATGGTAAAAAAAAAAAAAA]
[-] EMBL CA761632 [AAGTGGCCCAGTTAAGCTGGTGGATTTCCGGAGAGAGATGGAGCAACTGCACCCCCGCTAATGGTGAAACACAATGTGTTTGAGGAGAAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGGTTCAATCGCGAAAATATGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAAACTGCGCTGAACATCATTAATCTGGCATTGTCAGATTTTCAGGCCAGTGCCATAAAGCCCCTTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGTGGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGCATGTAGAATAGCTTGCTTTGGATGGAGAAATTTACTGGAAGGATGGTAAATCGTCTTTTGTACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGATTGGGTGTTTGTGGTGCGGGCATCTGACCTGTATTTCTTAGATTGTAATCAGATGCATTTTGTGAAGGATAAAGTCATCAACAGTAAATTAATTGTGTAAAAAAGATGTATTTGTTTCATGATCATTAATTTAATTGGCGCACTTTGCAATGGTAAAAAAAAAAAAAA]
consensusID : consensus_8891#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 490 fasta sequence
[TCAGGGTCATGCTAACAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGATAAAACAACAGGCTGCATACTATTTTCTGGATTTTTCTATGGGCATGCATGCTCACCAGAGTGGGAGTATATTGCATCCCATGACTAAATTTATCATACATTTGTCAACCTGCTGACCACAGGTTTTTTAGCTTCTTATTCATAACTACAGTTAGCAAGCAATGGTTTCAATATGTTCGTACTTGAGGGAGGCCATATACCTAAAATAAGTATATGTCAGTATTTTCAATAAAGCATGTGAATATGTTTGAAAGGTGGTGCAGAGCTTGCAAGTTATCTTCTCATTTTATCCAATAAACTATTTATTTAGCTTTTAGTAGCTCTGTATTTTTTTTCTATCTTCCTTTCTCTGTAAAGATAAAGATGAAATGCTTTTAGT]
[+] EMBL CF304639 [TCAGGGTCATGCTAACAGATAGGTGATGTATTGATACAATGGATTGTTTCCAGCAATTTTCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAAGCCATAATTTCCAGATAAAACAACAGGCTGCATACTATTTTCTGGATTTTTCTATGGGCATGCATGCTCACCAGAGTGGGAGTATATTGCATCCCATGACTAAATTTATCATACATTTGTCAACCTGCTGACCACAGGTTTTTTAGCTTCTTATTCATAACTACAGTTAGCAAGCAATGGTTTCAATATGTTCGTACTTGAGGGAGGCCATATACCTAAAATAAGTATATGTCAGTATTTTCAATAAAGCATGTGAATATGTTTGAAAGGTGGTGCAGAGCTTGCAAGTTATCTTCTCATTTTATCCAATAAACTATTTATTTAGCTTTTAGTAGCTCTGTATTTTTTTTCTATCTTCCTTTCTCTGTAAAGATAAAGATGAAATGCTTTTAGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8891#1 ------------------------------------------------------------
consensus_8891#4 ------------------------------------------------------------
consensus_8891#0 TTCCTCGAGCACTGTTGGCCTACTGGATCCGCTCCCGCACGTTTGCATCGCCGCTAACCT 60
consensus_8891#3 ------------------------------------------------------------
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 ------------------------------------------------------------
consensus_8891#1 ------------------------------------------------------------
consensus_8891#4 ------------------------------------------------------------
consensus_8891#0 CCGCCTGGCCCCGCACGCCTGCGCCGCCGATTCCCTCCGCCTGCACCGTCGTTCTCCCCA 120
consensus_8891#3 ------------------------------------------------------------
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 ------------------------------------------------------------
consensus_8891#1 ------------------------------------------------------------
consensus_8891#4 ------------------------------------------------------------
consensus_8891#0 TGCCGCACCGCCGCTTCCCTCCGCCCGCTCCTCTCCCGCGCCGCCCTCTCCACCTCTCCT 180
consensus_8891#3 ------------------------------------------------------------
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 ------------------------------------------------------------
consensus_8891#1 ------------------------------------------------------------
consensus_8891#4 ------------------------------------------------------------
consensus_8891#0 CACGTCCCGTCACGCCTGCCCACCTCAGCCGCAGCCCACAAGCAGGGTCCCCGATCCCGT 240
consensus_8891#3 ------------------------------------------------------------
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 ------------------------------------------------------------
consensus_8891#1 ------------------------------------------------------------
consensus_8891#4 ------------------------------------------------------------
consensus_8891#0 AAACCCTAGCCTTTGCCTCGCCCTCGCTGCCTCGCTGGCTGGATCCCCACTATCTGGGCG 300
consensus_8891#3 ------------------------------------------------------------
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 ------------------------------------------------------------
consensus_8891#1 ------------------------------------------------------------
consensus_8891#4 ------------------------------------------------------------
consensus_8891#0 CCGTCGATCCGTCGCCGTCTGGTCTCCATCGAGCCGCATCGCCCTCGCGTCTCCACCACA 360
consensus_8891#3 ------------------------------------------------------------
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 ------------------------------------------------------------
consensus_8891#1 ------------------------------------------------------------
consensus_8891#4 ------------------------------------------------------------
consensus_8891#0 CCTCGCCGTCGATTACCCGCAGTCCGGCCGCCGTCGATCCCTCGACATCTTGTGTCCGCC 420
consensus_8891#3 ------------------------------------------------------------
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 ------------------------------------------------------------
consensus_8891#1 ------------------------------------------------------------
consensus_8891#4 ------------------------------------------------------------
consensus_8891#0 GCGACTCCTCTGCCCCCTCCGCAAACTCATCCGGATCACGTCTCCCTTGCTGCTCCTGTG 480
consensus_8891#3 ------------------------------------------------------------
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 ------------------------------------------------------------
consensus_8891#1 -------------------------------------------------------CAAAG 5
consensus_8891#4 ------------------------------------------------------------
consensus_8891#0 TAAGACAAATGTGAATCTATGTTGAGTTCCATCCGGACAACTGTGGGCGAAAAGGCAAAG 540
consensus_8891#3 ------------------------------------------------------------
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 ------------------------------------------------------------
consensus_8891#1 ATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCG------ATT 59
consensus_8891#4 ------------------------------------------------------------
consensus_8891#0 ATTTTAATGGCTGACGAAGGCCAGCGACCGGAATTTGACGATGAAGTAGCGCCAAAGATT 600
consensus_8891#3 ------------------------------------------------------------
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 ------------------------------------------------------------
consensus_8891#1 GAAAGAAAGAGAGAAAGAGATCACAACCTGGTGGAATATCTAGCTTCAGCGGAATAGAAG 119
consensus_8891#4 ------------------------------------------------------------
consensus_8891#0 GAAAGAAAGAGAGAAAGAGATCACAACCTGGTGGAATATCTAGCTTCAGCGGAATAGAAG 660
consensus_8891#3 ------------------------------------------------------------
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 -----------------------------------------------GGCCCCGCACGCC 13
consensus_8891#1 GGTCTTCCATCGCGTTTGCTCAGATAACAGAAAAGTGGCGCAG--TTAAGCTGGTGGATC 177
consensus_8891#4 --------------------------------AAGTGGCCCAG--TTAAGCTGGTGGATT 26
consensus_8891#0 GGTCTTCCATCGCGTTTGCTCAGATAACAGAAAAGTGGCGCAG--TTAAGCTGGTGGATC 718
consensus_8891#3 ------------------------TAATATAAAAAATGCTAAGAATTATGCT--TGAGTT 34
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 TGCGCCGCCGATTCCCTCCGCCTGCACCGTCGTTCTCCCCATGCCGCACCGCCGCTTCCC 73
consensus_8891#1 TACGGAGAGAGATGGAGCAACTGCACCACCGCTAATGGTGAAACACAATGTGTTTGAGGA 237
consensus_8891#4 TCCGGAGAGAGATGGAGCAACTGCACCCCCGCTAATGGTGAAACACAATGTGTTTGAGGA 86
consensus_8891#0 TATGGAGAGAGATGGAGCAACTGCACCACCGCTAATGGTGAAACACAATGTGTTTGAGGA 778
consensus_8891#3 T------GGACTTCTAACAATCAGATCCCTCCCTGATATAATATGTACTCTAAATGATGG 88
consensus_8891#5 ------------------------------------------------TCAGGGTCATGC 12
consensus_8891#2 TCCGCCCGCTCCTCTCCCGCGCCGCCCTCTCCACCTCTCCTCACGTCCCGTCACGCCTGC 133
*
consensus_8891#1 GAAG--------------ATAGGTG-ATGTATTGATACAATGGATTGTTTCCAGCAATTT 282
consensus_8891#4 GAAG--------------ATAGGTG-ATGTATTGATACAATGGATTGTTTCCAGCAATTT 131
consensus_8891#0 GAAGGGTCATGCTAACAGATAGGTG-ATGTATTGATACAATGGATTGTTTCCAGCAATTT 837
consensus_8891#3 TAATATAGCCAATAGTTTTAGAATGCATGTGTGGTGACCATTTAGGATTTTCA-TACGGT 147
consensus_8891#5 TAACAG------------ATAGGTG-ATGTATTGATACAATGGATTGTTTCCAGCAATTT 59
consensus_8891#2 CCACCTCAGCCGCAGCCCACAAGCAGGGTCCCCGATCCCGTAAACCCTAGCCTTTGCCTC 193
* * * * * * *
consensus_8891#1 TCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAA---GCCAT--AATTTCCAG--GT 335
consensus_8891#4 TCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAA---GCCAT--AATTTCCAG--GT 184
consensus_8891#0 TCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAA---GCCAT--AATTTCCAG--GT 890
consensus_8891#3 ACTTATTACCTTTAGGTAACAACTTTAGCATATTGTAAGGGCTATCTGATGTGCAA--CT 205
consensus_8891#5 TCTTGAGATGGCCAACTAATTCAAGAAGCAAATTGAA---GCCAT--AATTTCCAG--AT 112
consensus_8891#2 GCCCTCGCTGCCTCGCTGGCTGGATCCCCACTATCTGGGCGCCGTC-GATCCGTCGCCGT 252
* * ** * ** * ** *
consensus_8891#1 TCAATCACGAAAATA-TGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAA 394
consensus_8891#4 TCAATCGCGAAAATA-TGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAA 243
consensus_8891#0 TCAATCACGAAAACA-TGCATCTGGGATATTTAATTTTCCAGCATGCAAGCTAGCTATAA 949
consensus_8891#3 TTAGCTATCTGATCAATGCTACTATTGCAATTA-TCTTTGAGC-TGCAAACCACAAGAAA 263
consensus_8891#5 AAAACAACAGGCTGCATACTATTTTCTGGATTTTTCTATGGGCATGCATGCT-CACCAGA 171
consensus_8891#2 CTGGTCTCCATCGAGCCGCATCGCCCTCGCGTCTCCACCACACCTCGCCGTCGATTACCC 312
* * * *
consensus_8891#1 ACTGCACTGAACATCATTAATCTG-----------GCATTGTCAGATT---TTCAGGC-- 438
consensus_8891#4 ACTGCGCTGAACATCATTAATCTG-----------GCATTGTCAGATT---TTCAGGC-- 287
consensus_8891#0 ACTGCACTGAACATCATTAATCTG-----------GCATTGGCAGATT---TTCAGGC-- 993
consensus_8891#3 GCTACACTGTTCAAAAAAAATCCCCTTTTCCTTATGCATAGTTGCATTACTTTCAGTATT 323
consensus_8891#5 GTGG----GAGTATATTGCATCCC-------------ATGACTAAATT--TATCATACAT 212
consensus_8891#2 GCAGT-CCGGCCGCCGTCGATCCCTCGACATCTTGTGTCCGCCGCGACTCCTCTGCCCCC 371
* ***
consensus_8891#1 -CAGTGCCATAAA--GCCCC-TTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGT 494
consensus_8891#4 -CAGTGCCATAAA--GCCCC-TTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGT 343
consensus_8891#0 -CAGTGCCATAAA--GCCCC-TTGAACTTGTCAGTGCCATATATAGTAACTTGTACAGGT 1049
consensus_8891#3 ACAAAATGATCAT--GCAACATTCCTCTTGTGCTTATTATGTATAACATCTTTTCTAGGT 381
consensus_8891#5 TTGTCAACCTGCT--GACCACAGGTTTTTTAGCTTCTTATTCATAACTACAGTT---AGC 267
consensus_8891#2 TCCGCAAACTCATCCGGATCACGTCTCCCTTGCTGCTCCTGTGTAA-GACAAATGTGAAT 430
* * * ** * *
consensus_8891#1 GGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGC 554
consensus_8891#4 GGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGC 403
consensus_8891#0 GGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGC 1109
consensus_8891#3 GGGATGTGGCTGATAGCTGAACCAATTCTGGCAATGTTTCACATTTTGTTGAAGAACTGC 441
consensus_8891#5 AAGCAATGGTTTCAATATGTTCGTACTTGAGGGAGGCCATATACCT---AAAATAAGTAT 324
consensus_8891#2 CTATGTTGAGTTCCATCCGGACAACTGTGGGCGAAAAGGCAAAGATTTTAATGGCTGACG 490
** * * * * * * * * *
consensus_8891#1 ATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTG 614
consensus_8891#4 ATGTAGAATAGCTTGCTTTGGATGGAGAAATTTACTGGAAGGATGGTAAATCGTCTTTTG 463
consensus_8891#0 ATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTG 1169
consensus_8891#3 ATGTAGAATAGCTTGCTTTGGATGGAGAAATCTACTGGAAGGATGGTAAATCGTCTTTTG 501
consensus_8891#5 ATGTC-AGTATTTTCAATAAAGCATGTGAATATGTTTGAAAGGTGGTGCA---------G 374
consensus_8891#2 AAGGCCAGCGACCGGAATTTGACGATGAAGTA-GCGGTAAGTGGAATTCCTCTGTTCCAT 549
* * * * * * ** *
consensus_8891#1 TACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGAT 674
consensus_8891#4 TACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGAT 523
consensus_8891#0 TACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGAT 1229
consensus_8891#3 TACATGCAAAGCCATCAAAAGTAGCTATTTTGTGTTTGCAGGTGCCACTCTAGACTAGAT 561
consensus_8891#5 AGCTTGCAA-GTTATC-----TTCTCATTTTATCCAATAAACTATTTATTTAGCTTTTAG 428
consensus_8891#2 AGCCAATTACCTTCTCCTCCCAAGTTATTCTCTATGTTTGGTGCCTCTCAAAAATTAAAA 609
* * ** *** * * * * *
consensus_8891#1 TGGGTGTTTG--TGGTGCGGGCATCTGACCTGTATTTCTTTAGATTGGAATCAG-ATGCA 731
consensus_8891#4 TGGGTGTTTG--TGGTGCGGGCATCTGACCTGTATTTCTT-AGATTGTAATCAG-ATGCA 579
consensus_8891#0 TGGGTGTTTG--TGGTGCGGGCATCTGACCTGTATTTCTT-AGATTGTAATCAG-ATGCA 1285
consensus_8891#3 TGGGTGTTTG--TGGTGCGGGCATCTGACCTGTATTTCTT-AGATTGTAATCAG-ATGCA 617
consensus_8891#5 TAGCTCTGTA--TTTTTTTTCTATCTT-CCTTTCTCTGTAAAGATAAAGATGAA-ATGC- 483
consensus_8891#2 TTAACTTAGGATTTTTTTTAATAGATCGATAGTGGCTGCACAGATTACCATGTGCGTGCA 669
* * * * * * * * **** ** ***
consensus_8891#1 TTTTTGNGAAGGATAAAGCCNTCAACAGTAAATTAATTGNGTAAAAAAGATGTATTTGG- 790
consensus_8891#4 TTTT-GTGAAGGATAAAGTCATCAACAGTAAATTAATTGTGTAAAAAAGATGTATTTG-- 636
consensus_8891#0 TTTT-GTGAAGGATAAAGTCATCAACAGTAAATTAATTGTGTAAAAAAGATGTATTTG-- 1342
consensus_8891#3 TTTT-GTGAAGGATAAAGTCATCACCAGTAAATTAATTGTGTAAAAAAGATGTATTTG-- 674
consensus_8891#5 TTTTAGT----------------------------------------------------- 490
consensus_8891#2 ATGGACCCTATGA-AATCACAATGTTTGGGAGTAAATTTAGTAAAAGATTGCTATTTCAC 728
*
consensus_8891#1 TTCNAAAAAAAAAAAAAAAAAAAAAGCGGCCCG--------------------------- 823
consensus_8891#4 TTTCATGATCATTAATTTAATTGGCGCACTTTGCAATGGTAAAAAAAAAAAAAA------ 690
consensus_8891#0 TTTCATGATCATTAATTTAATTGGTGCACTTGGCAAAAAAAAAAAAAAAGGCCACATGT- 1401
consensus_8891#3 TTTCAGAAGCATTAATTTAATTGGTGCACTT----------------------------- 705
consensus_8891#5 ------------------------------------------------------------
consensus_8891#2 TGTCAATGTTTGGGAGTANATTTGTGCCTGCAGAAGTTTGGTTTTATCCCCTAATGCATA 788
consensus_8891#1 ----
consensus_8891#4 ----
consensus_8891#0 ----
consensus_8891#3 ----
consensus_8891#5 ----
consensus_8891#2 CGAG 792
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||