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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8893#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2330 fasta sequence
[CTCTCTCTCTTCGATTCCCCTTTCCCCCCCTCACCCACCCACCTCCACGCCCCCGCCGCCGGCCGGCCGGCCGGAACCCTAGCTCCGGCGAGCCCCTCCCACCCCCCGGCCCCGGGCCTGGCTCCACCCGACGCCGCGCCCCTCGATCGGGTCCCTTGCGGGGGACCGCGGCGTCGAGGAGGGCGATCGCGAGATCGGGGGAGGTTGCTGCTGCTGCTGGGCGGGTGGGCGGAGGGGAGGGGGTGAGGGCTGCCATGGCGGGGAGTGGGAGGCCGCCGGCGGCGCAGAAGAAGATCCTGCAGTCGCTGCGCCCGCCGCTGCCGTTCGCCGCCTCGTCGAGGTCGCCCTTCGCGGCGCCCAACGACTACCACCGCTTCCCCGCTGGTGGCGCGGCGGCGGCGGCGGCGTCTGGTTCGGGTGGCATCGGCGCGGGCGGTGCTGGCGGCGGCGGCGATATCGAGGAGGGGCTGGTCATCCGGACGCCGCAAAAAAGAAAAGCACCAGAAGAAAGTGATGTTGCTGAGTCTAGCGACTGTATGATTACTAGCCCTGGATTTGCTGTCAGTCCAATGCTCACTCCAGTCTCTGGGAAAGCTGTTAAGACTTCCAAGTCAAAGACTAAGAACAACAAAGCTGGGCCTCAGACACCTACATCAAATGTTGGTTCACCACTTAATCCCCCAACTCCTGTTGGTACATGCCGTTATGACAGTTCGTTAGGGCTTCTCACAAAGAAGTTCATAAATTTGCTGAAGCAGGCTCCGGATGGCATTCTAGATTTGAATAATGCTGCAGAAACACTAGAGGTTCAAAAACGGCGTATATATGATATTACCAATGTACTTGAAGGAATAGGGTTGATTGAAAAGACACTCAAGAACAGAATCCGTTGGAAGGGCTTGGATGATTCAGGAGTGGAATTAGATAATGGTCTTTCAGCTTTGCAGGCAGAAGTTGAAAATCTTAGTCTGAAGGAGCAAGCATTAGATGAGCGCATAAGTGATATGCGTGAAAAACTAAGAGGTTTAACTGAAGATGAAAACAATCAAAGATGGCTCTATGTGACAGAAGATGATATCAAGGGATTACCCTGCTTTCAGAATGAAACACTAATTGCAATAAAAGCTCCTCATGGCACTACACTTGAAGTCCCAGATCCTGACGAGGCTGGTGATTATCTCCAGAGAAGATATAGAATCGTATTAAGAAGTACAATGGGCCCAATAGATGTCTACTTAGTTAGTCAATTTGATGAGAAATTTGAGGACTTGGGTGGGGGTGCAACACCATCAGGGCATGCAAATGTACCAAAACATCAACCTACTGAAGTCTTCAATACAACAAATGCTGGGGTTGGGCAATGTAGCAACTCAGTTGCTGTGGACAATAATATTCAGCACAGCCAGACGATTCCTCAGGATCCTAGTGCTTCACATGATTTTGGAGGAATGACAAGGATTATCCCTTCAGATATTGATACTGATGCTGATTACTGGCTCATATCAGAAGGGGATGTCAGCATTACTGATATGTGGAAAACAGCACCAGATGTGCAGTGGGATGAGAGCCTGGATACGGATGTCTTCCTATCTGAAGACGTTAGAACGCCAAGTTCACACAATCAGCAGCCATCTGCAGTGGGCGGGCCACAGATGCAGGTCTCAGACATGCATAAACCCTAGGATCACAGGGGTTACAGAAGTGAAAAGATGACATCTGGAATTCCTGGAGCGGTGTTTGTAGTGAAAAGTGAAAGCATGACAGCAAATGCTCATTGCCAAATTGTAAAGAGCCGGGTGGTCTTCATCAGAATATCTGCATCTTCTCGAGACACCAAGTCCGTGCGAGAGATCAGGATGACACCATTCCGGATTCACATCTGCTGTGGAGGCTGGTGGCGTCAACTAACTTACCAGCCTGCTGTTTCAGCACCCTGCTTCAGTCGAACGGGAGTAAATCTTGCTGCTGCTTTCGCTGTGAAGCCTGCTGCGGTGCTCATTAAGGCACTGATATATTTTTTGCATTCAAAACTAACTAGTCATCAGCAAGGAAACGGTGGGCTTTGCTGTGCTCTGTCGAGTATTCTTTGAAAATTCTTTGTACATTGGGAGGTATAAGGGCATGCAGGGCTCGAGTTATTGGTTTGACGGGAGCAATGAGCTGAGTTAATGATGTAACCGAGCCGTCTTTGTAAATTGTTCCATGCTCTTCCTCAAATACAATGGATAGACTTTCATTTTGAGATATGATGCTTCAGTAGTCATTTGCTAGTCACCATGGAGTGATGTGATATCTTTGCTACTGGTATGAACCTCAAAATGATACTCGCC]
[+] EMBL AK068689 [CTCTCTCTCTTCGATTCCCCTTTCCCCCCCTCACCCACCCACCTCCACGCCCCCGCCGCCGGCCGGCCGGCCGGAACCCTAGCTCCGGCGAGCCCCTCCCACCCCCCGGCCCCGGGCCTGGCTCCACCCGACGCCGCGCCCCTCGATCGGGTCCCTTGCGGGGGACCGCGGCGTCGAGGAGGGCGATCGCGAGATCGGGGGAGGTTGCTGCTGCTGCTGGGCGGGTGGGCGGAGGGGAGGGGGTGAGGGCTGCCATGGCGGGGAGTGGGAGGCCGCCGGCGGCGCAGAAGAAGATCCTGCAGTCGCTGCGCCCGCCGCTGCCGTTCGCCGCCTCGTCGAGGTCGCCCTTCGCGGCGCCCAACGACTACCACCGCTTCCCCGCTGGTGGCGCGGCGGCGGCGGCGGCGTCTGGTTCGGGTGGCATCGGCGCGGGCGGTGCTGGCGGCGGCGGCGATATCGAGGAGGGGCTGGTCATCCGGACGCCGCAAAAAAGAAAAGCACCAGAAGAAAGTGATGTTGCTGAGTCTAGCGACTGTATGATTACTAGCCCTGGATTTGCTGTCAGTCCAATGCTCACTCCAGTCTCTGGGAAAGCTGTTAAGACTTCCAAGTCAAAGACTAAGAACAACAAAGCTGGGCCTCAGACACCTACATCAAATGTTGGTTCACCACTTAATCCCCCAACTCCTGTTGGTACATGCCGTTATGACAGTTCGTTAGGGCTTCTCACAAAGAAGTTCATAAATTTGCTGAAGCAGGCTCCGGATGGCATTCTAGATTTGAATAATGCTGCAGAAACACTAGAGGTTCAAAAACGGCGTATATATGATATTACCAATGTACTTGAAGGAATAGGGTTGATTGAAAAGACACTCAAGAACAGAATCCGTTGGAAGGGCTTGGATGATTCAGGAGTGGAATTAGATAATGGTCTTTCAGCTTTGCAGGCAGAAGTTGAAAATCTTAGTCTGAAGGAGCAAGCATTAGATGAGCGCATAAGTGATATGCGTGAAAAACTAAGAGGTTTAACTGAAGATGAAAACAATCAAAGATGGCTCTATGTGACAGAAGATGATATCAAGGGATTACCCTGCTTTCAGAATGAAACACTAATTGCAATAAAAGCTCCTCATGGCACTACACTTGAAGTCCCAGATCCTGACGAGGCTGGTGATTATCTCCAGAGAAGATATAGAATCGTATTAAGAAGTACAATGGGCCCAATAGATGTCTACTTAGTTAGTCAATTTGATGAGAAATTTGAGGACTTGGGTGGGGGTGCAACACCATCAGGGCATGCAAATGTACCAAAACATCAACCTACTGAAGTCTTCAATACAACAAATGCTGGGGTTGGGCAATGTAGCAACTCAGTTGCTGTGGACAATAATATTCAGCACAGCCAGACGATTCCTCAGGATCCTAGTGCTTCACATGATTTTGGAGGAATGACAAGGATTATCCCTTCAGATATTGATACTGATGCTGATTACTGGCTCATATCAGAAGGGGATGTCAGCATTACTGATATGTGGAAAACAGCACCAGATGTGCAGTGGGATGAGAGCCTGGATACGGATGTCTTCCTATCTGAAGACGTTAGAACGCCAAGTTCACACAATCAGCAGCCATCTGCAGTGGGCGGGCCACAGATGCAGGTCTCAGACATGCATAAACCCTAGGATCACAGGGGTTACAGAAGTGAAAAGATGACATCTGGAATTCCTGGAGCGGTGTTTGTAGTGAAAAGTGAAAGCATGACAGCAAATGCTCATTGCCAAATTGTAAAGAGCCGGGTGGTCTTCATCAGAATATCTGCATCTTCTCGAGACACCAAGTCCGTGCGAGAGATCAGGATGACACCATTCCGGATTCACATCTGCTGTGGAGGCTGGTGGCGTCAACTAACTTACCAGCCTGCTGTTTCAGCACCCTGCTTCAGTCGAACGGGAGTAAATCTTGCTGCTGCTTTCGCTGTGAAGCCTGCTGCGGTGCTCATTAAGGCACTGATATATTTTTTGCATTCAAAACTAACTAGTCATCAGCAAGGAAACGGTGGGCTTTGCTGTGCTCTGTCGAGTATTCTTTGAAAATTCTTTGTACATTGGGAGGTATAAGGGCATGCAGGGCTCGAGTTATTGGTTTGACGGGAGCAATGAGCTGAGTTAATGATGTAACCGAGCCGTCTTTGTAAATTGTTCCATGCTCTTCCTCAAATACAATGGATAGACTTTCATTTTGAGATATGATGCTTCAGTAGTCATTTGCTAGTCACCATGGAGTGATGTGATATCTTTGCTACTGGTATGAACCTCAAAATGATACTCGCC]
[+] EMBL AU182837 [ CTCACCCACCCACCTCCACGCCCCCGCCGCCGGCCGGCCGGCCGGAACCCTAGCTCCGGCGAGCCCCTCCCACCCCCCGGCCCCGGGCCTGGCTCCACCCGACGCCGCGCCCCTCGATCGGGTCCCTTGCGGGGGACCGCGGCGTCGAGGAGGGCGATCGCGAGATCGGGGGAGGTTGCTGCTGCTGCTGGGCGGGTGGGCGGAGGGGAGGGGGTGAGGGCTNCCATGGCGGGGAGTGGGAGGCCGCCGGCGGCGCANAAGAAGATCCTG AGTCGCTGNGCCCGCCGtgnc ]
consensusID : consensus_8893#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2018 fasta sequence
[TGGAGTACATCGAGACAGTCCCACTAAACCAGTAAGGATGGGAATATGGTGTTTGTTTGTTCTTTATATGTTGTCTAGCATCCATGGATTCTGTTGTTAGGACCCACATTGGTCATATGCTTAAGATGATACATTTTTGTTCTATGTTTCTCATTACTTTTAGCGACTATAAAATACAAGCTATTCTCTCTTCACAGCAAAAAAGAAAAGCACCAGAAGAAAGTGATGTTGCTGAGTCTAGCGACTGTATGATTACTAGCCCTGGATTTGCTGTCAGTCCAATGCTCACTCCAGTCTCTGGGAAAGCTGTTAAGACTTCCAAGTCAAAGACTAAGAACAACAAAGCTGGGCCTCAGACACCTACATCAAATGTTGGTTCACCACTTAATCCCCCAACTCCTGTTGGTACATGCCGTTATGACAGTTCGTTAGGGCTTCTCACAAAGAAGTTCATAAATTTGCTGAAGCAGGCTCCGGATGGCATTCTAGATTTGAATAATGCTGCAGAAACACTAGAGGTTCAAAAACGGCGTATATATGATATTACCAATGTACTTGAAGGAATAGGGTTGATTGAAAAGACACTCAAGAACAGAATCCGTTGGAAGGGCTTGGATGATTCAGGAGTGGAATTAGATAATGGTCTTTCAGCTTTGCAGGCAGAAGTTGAAAATCTTAGTCTGAAGGAGCAAGCATTAGATGAGCGCATAAGTGATATGCGTGAAAAACTAAGAGGTTTAACTGAAGATGAAAACAATCAAAGATGGCTCTATGTGACAGAAGATGATATCAAGGGATTACCCTGCTTTCAGAATGAAACACTAATTGCAATAAAAGCTCCTCATGGCACTACACTTGAAGTCCCAGATCCTGACGAGGCTGGTGATTATCTCCAGAGAAGATATAGAATCGTATTAAGAAGTACAATGGGCCCAATAGATGTCTACTTAGTTAGTCAATTTGATGAGAAATTTGAGGACTTGGGTGGGGGTGCAACACCATCAGGGCATGCAAATGTACCAAAACATCAACCTACTGAAGTCTTCAATACAACAAATGCTGGGGTTGGGCAATGTAGCAACTCAGTTGCTGTGGACAATAATATTCAGCACAGCCAGACGATTCCTCAGGATCCTAGTGCTTCACATGATTTTGGAGGAATGACAAGGATTATCCCTTCAGATATTGATACTGATGCTGATTACTGGCTCATATCAGAAGGGGATGTCAGCATTACTGATATGTGGAAAACAGCACCAGATGTGCAGTGGGATGAGAGCCTGGATACGGATGTCTTCCTATCTGAAGACGTTAGAACGCCAAGTTCACACAATCAGCAGCCATCTGCAGTGGGCGGGCCACAGATGCAGGTCTCAGACATGCATAAACCCTAGGATCACAGGGGTTACAGAAGTGAAAAGATGACATCTGGAATTCCTGGAGCGGTGTTTGTAGTGAAAAGTGAAAGCATGACAGCAAATGCTCATTGCCAAATTGTAAAGAGCCGGGTGGTCTTCATCAGAATATCTGCATCTTCTCGAGACACCAAGTCCGTGCGAGAGATCAGGATGACACCATTCCGGATTCACATCTGCTGTGGAGGCTGGTGGCGTCAACTAACTTACCAGCCTGCTGTTTCAGCACCCTGCTTCAGTCGAACGGGAGTAAATCTTGCTGCTGCTTTCGCTGTGAAGCCTGCTGCGGTGCTCATTAAGGCACTGATATATTTTTTGCATTCAAAACTAACTAGTCATCAGCAAGGAAACGGTGGGCTTTGCTGTGCTCTGTCGAGTATTCTTTGAAAATTCTTTGTACATTGGGAGGTATAAGGGCATGCAGGGCTCGAGTTATTGGTTTGACGGGAGCAATGAGCTGAGTTAATGATGTAACCGAGCCGTCTTTGTAAATTGTTCCATGCTCTTCCTCAAATACAATGGATAGACTTTCATTTTGAAAAAAAAAAAAAAAAAAAAACTACACAAACAAGCGAAACTAAATTAATCAAGGTAGTACATACA]
[+] EMBL AB041725 [TGGAGTACATCGAGACAGTCCCACTAAACCAGTAAGGATGGGAATATGGTGTTTGTTTGTTCTTTATATGTTGTCTAGCATCCATGGATTCTGTTGTTAGGACCCACATTGGTCATATGCTTAAGATGATACATTTTTGTTCTATGTTTCTCATTACTTTTAGCGACTATAAAATACAAGCTATTCTCTCTTCACAGCAAAAAAGAAAAGCACCAGAAGAAAGTGATGTTGCTGAGTCTAGCGACTGTATGATTACTAGCCCTGGATTTGCTGTCAGTCCAATGCTCACTCCAGTCTCTGGGAAAGCTGTTAAGACTTCCAAGTCAAAGACTAAGAACAACAAAGCTGGGCCTCAGACACCTACATCAAATGTTGGTTCACCACTTAATCCCCCAACTCCTGTTGGTACATGCCGTTATGACAGTTCGTTAGGGCTTCTCACAAAGAAGTTCATAAATTTGCTGAAGCAGGCTCCGGATGGCATTCTAGATTTGAATAATGCTGCAGAAACACTAGAGGTTCAAAAACGGCGTATATATGATATTACCAATGTACTTGAAGGAATAGGGTTGATTGAAAAGACACTCAAGAACAGAATCCGTTGGAAGGGCTTGGATGATTCAGGAGTGGAATTAGATAATGGTCTTTCAGCTTTGCAGGCAGAAGTTGAAAATCTTAGTCTGAAGGAGCAAGCATTAGATGAGCGCATAAGTGATATGCGTGAAAAACTAAGAGGTTTAACTGAAGATGAAAACAATCAAAGATGGCTCTATGTGACAGAAGATGATATCAAGGGATTACCCTGCTTTCAGAATGAAACACTAATTGCAATAAAAGCTCCTCATGGCACTACACTTGAAGTCCCAGATCCTGACGAGGCTGGTGATTATCTCCAGAGAAGATATAGAATCGTATTAAGAAGTACAATGGGCCCAATAGATGTCTACTTAGTTAGTCAATTTGATGAGAAATTTGAGGACTTGGGTGGGGGTGCAACACCATCAGGGCATGCAAATGTACCAAAACATCAACCTACTGAAGTCTTCAATACAACAAATGCTGGGGTTGGGCAATGTAGCAACTCAGTTGCTGTGGACAATAATATTCAGCACAGCCAGACGATTCCTCAGGATCCTAGTGCTTCACATGATTTTGGAGGAATGACAAGGATTATCCCTTCAGATATTGATACTGATGCTGATTACTGGCTCATATCAGAAGGGGATGTCAGCATTACTGATATGTGGAAAACAGCACCAGATGTGCAGTGGGATGAGAGCCTGGATACGGATGTCTTCCTATCTGAAGACGTTAGAACGCCAAGTTCACACAATCAGCAGCCATCTGCAGTGGGCGGGCCACAGATGCAGGTCTCAGACATGCATAAACCCTAGGATCACAGGGGTTACAGAAGTGAAAAGATGACATCTGGAATTCCTGGAGCGGTGTTTGTAGTGAAAAGTGAAAGCATGACAGCAAATGCTCATTGCCAAATTGTAAAGAGCCGGGTGGTCTTCATCAGAATATCTGCATCTTCTCGAGACACCAAGTCCGTGCGAGAGATCAGGATGACACCATTCCGGATTCACATCTGCTGTGGAGGCTGGTGGCGTCAACTAACTTACCAGCCTGCTGTTTCAGCACCCTGCTTCAGTCGAACGGGAGTAAATCTTGCTGCTGCTTTCGCTGTGAAGCCTGCTGCGGTGCTCATTAAGGCACTGATATATTTTTTGCATTCAAAACTAACTAGTCATCAGCAAGGAAACGGTGGGCTTTGCTGTGCTCTGTCGAGTATTCTTTGAAAATTCTTTGTACATTGGGAGGTATAAGGGCATGCAGGGCTCGAGTTATTGGTTTGACGGGAGCAATGAGCTGAGTTAATGATGTAACCGAGCCGTCTTTGTAAATTGTTCCATGCTCTTCCTCAAATACAATGGATAGACTTTCATTTTGAAAAAAAAAAAA ]
[+] EMBL CF325679 [ TGAAAGCATGACAGCAAATGCTCATTGCCAAATTGTAAAGAGCCGGGTGGTCTTCATCAGAATATCTGCATCTTCTCGAGACACCAAGTCCGTGCGAGAGATCAGGATGACACCATTCCGGATTCACATCTGCTGTGGAGGCTGGTGGCGTCAACTAACTTACCAGCCTGCTGTTTCAGCACCCTGCTTCAGTCGAACGGGAGTAAATCTTGCTGCTGCTTTCGCTGTGAAGCCTGCTGCGGTGCTCATTAAGGCACTGATATATTTTTTGCATTCAAAACTAACTAGTCATCAGCAAGGAAACGGTGGGCTTTGCTGTGCTCTGTCGAGTATTCTTTGAAAATTCTTTGTACATTGGGAGGTATAAGGGCATGCAGGGCTCGAGTTATTGGTTTGACGGGAGCAATGAGCTGAGTTAATGATGTAACCGAGCCGTCTTTGTAAATTGTTCCATGCTCTTCCTCAAATACAATGGATAGACTTTCATTTTGAGAAAAAAAAAAAAAAAAAAACTACACAAACAAGCGAAACTAAATTAATCAAGGTAGTACATACA]
consensusID : consensus_8893#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 625 fasta sequence
[AGACAAGGGGGAAAAGTGAAAGCATGACAGCAAATGCTCATTGCCAAATTGTAAAGAGCCGGGTGGTCTTCATCAGAATATTTGCATCTTCTCGAGACACCAAGTCCGTGCGAGAGATCAGGATGACCCCATTCCGGATTCACATTTGCTGTGGAGGCTGGTGGCGTCAACTAACTTACCAGCCTGCTGTTTCAGCACCCTGCTTCAGTCGAACGGGAGTAAATCTTGCTGCTGCTTTCGCTGTGAAGCCTGTTGCGGTGCTCATTAAGGCACTGATATATTTTTTGCATTCAAAACTAACTAGTTATCAGCAAGGAAACGGTGGGCTTTGCTGTGCTCTGTCGAGTATTCTTTGAAAATTCTTTGTACATTGGGAGGTATAAGGGCATGCAGGGCTCGAGTTATTGGTTTGACGGGAGCAATGAGCTGAGTTAATGATGTAACCGAGCCGTCTTTGTAAATTGTTACATGCTCTTCCTCAAATACAATGGATAGACTTTCATTTTGAGATATGATGCTTCAGTAGTCATTTGCTAGTCCCCATGGAGTGATGTGATATCTTTGCTACTGGTATGAACCTCAAAATGATACTCGCCGTTAATTTTAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA761139 [AGACAAGGGGGAAAAGTGAAAGCATGACAGCAAATGCTCATTGCCAAATTGTAAAGAGCCGGGTGGTCTTCATCAGAATATTTGCATCTTCTCGAGACACCAAGTCCGTGCGAGAGATCAGGATGACCCCATTCCGGATTCACATTTGCTGTGGAGGCTGGTGGCGTCAACTAACTTACCAGCCTGCTGTTTCAGCACCCTGCTTCAGTCGAACGGGAGTAAATCTTGCTGCTGCTTTCGCTGTGAAGCCTGTTGCGGTGCTCATTAAGGCACTGATATATTTTTTGCATTCAAAACTAACTAGTTATCAGCAAGGAAACGGTGGGCTTTGCTGTGCTCTGTCGAGTATTCTTTGAAAATTCTTTGTACATTGGGAGGTATAAGGGCATGCAGGGCTCGAGTTATTGGTTTGACGGGAGCAATGAGCTGAGTTAATGATGTAACCGAGCCGTCTTTGTAAATTGTTACATGCTCTTCCTCAAATACAATGGATAGACTTTCATTTTGAGATATGATGCTTCAGTAGTCATTTGCTAGTCCCCATGGAGTGATGTGATATCTTTGCTACTGGTATGAACCTCAAAATGATACTCGCCGTTAATTTTAAAAAAAAAAAAAAAAAAAA]
[-] EMBL CA761291 [AGACAAGGGGGAAAAGTGAAAGCATGACAGCAAATGCTCATTGCCAAATTGTAAAGAGCCGGGTGGTCTTCATCAGAATATTTGCATCTTCTCGAGACACCAAGTCCGTGCGAGAGATCAGGATGACCCCATTCCGGATTCACATTTGCTGTGGAGGCTGGTGGCGTCAACTAACTTACCAGCCTGCTGTTTCAGCACCCTGCTTCAGTCGAACGGGAGTAAATCTTGCTGCTGCTTTCGCTGTGAAGCCTGTTGCGGTGCTCATTAAGGCACTGATATATTTTTTGCATTCAAAACTAACTAGTTATCAGCAAGGAAACGGTGGGCTTTGCTGTGCTCTGTCGAGTATTCTTTGAAAATTCTTTGTACATTGGGAGGTATAAGGGCATGCAGGGCTCGAGTTATTGGTTTGACGGGAGCAATGAGCTGAGTTAATGATGTAACCGAGCCGTCTTTGTAAATTGTTACATGCTCTTCCTCAAATACAATGGATAGACTTTCATTTTGAGATATGATGCTTCAGTAGTCATTTGCTAGTCCCCATGGAGTGATGTGATATCTTTGCTACTGGTATGAACCTCAAAATGATACTCGCCGTTAATTTTAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8893#0 CTCTCTCTCTTCGATTCCCCTTTCCCCCCCTCACCCACCCACCTCCACGCCCCCGCCGCC 60
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 ------------------------------------------------------------
consensus_8893#0 GGCCGGCCGGCCGGAACCCTAGCTCCGGCGAGCCCCTCCCACCCCCCGGCCCCGGGCCTG 120
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 ------------------------------------------------------------
consensus_8893#0 GCTCCACCCGACGCCGCGCCCCTCGATCGGGTCCCTTGCGGGGGACCGCGGCGTCGAGGA 180
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 ------------------------------------------------------------
consensus_8893#0 GGGCGATCGCGAGATCGGGGGAGGTTGCTGCTGCTGCTGGGCGGGTGGGCGGAGGGGAGG 240
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 ------------------------------------------------------------
consensus_8893#0 GGGTGAGGGCTGCCATGGCGGGGAGTGGGAGGCCGCCGGCGGCGCAGAAGAAGATCCTGC 300
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 ------------------------------------------------TGGAGTACATCG 12
consensus_8893#0 AGTCGCTGCGCCCGCCGCTGCCGTTCGCCGCCTCGTCGAGGTCGCCCTTCGCGGCGCCCA 360
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 AGACAGTCCCACTAAACCAGTAAGGATGGGAATATGGTGTTTGTTTGTTCTTTATATGTT 72
consensus_8893#0 ACGACTACCACCGCTTCCCCGCTGGTGGCGCGGCGGCGGCGGCGGCGTCTGGTTCGGGTG 420
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 GTCTAGCATCCATGGATTCTGTTGTTAGGACCCACATTGGTCATATGCTTAAGATGATAC 132
consensus_8893#0 GCATCGGCGCGGGCGGTGCTGGCGGCGGCGGCGATATCGAGGAGGGGCTGGTCATCCGGA 480
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 ATTTTTGTTCTATGTTTCTCATTACTTTTAGCGACTATAAAATACAAGCTATTCTCTCTT 192
consensus_8893#0 CGCCGCAAAAAAGAAAAGCACCAGAAGAAAGTGATGTTGCTGAGTCTAGCGACTGTATGA 540
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 CACAGCAAAAAAGAAAAGCACCAGAAGAAAGTGATGTTGCTGAGTCTAGCGACTGTATGA 252
consensus_8893#0 TTACTAGCCCTGGATTTGCTGTCAGTCCAATGCTCACTCCAGTCTCTGGGAAAGCTGTTA 600
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 TTACTAGCCCTGGATTTGCTGTCAGTCCAATGCTCACTCCAGTCTCTGGGAAAGCTGTTA 312
consensus_8893#0 AGACTTCCAAGTCAAAGACTAAGAACAACAAAGCTGGGCCTCAGACACCTACATCAAATG 660
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 AGACTTCCAAGTCAAAGACTAAGAACAACAAAGCTGGGCCTCAGACACCTACATCAAATG 372
consensus_8893#0 TTGGTTCACCACTTAATCCCCCAACTCCTGTTGGTACATGCCGTTATGACAGTTCGTTAG 720
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 TTGGTTCACCACTTAATCCCCCAACTCCTGTTGGTACATGCCGTTATGACAGTTCGTTAG 432
consensus_8893#0 GGCTTCTCACAAAGAAGTTCATAAATTTGCTGAAGCAGGCTCCGGATGGCATTCTAGATT 780
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 GGCTTCTCACAAAGAAGTTCATAAATTTGCTGAAGCAGGCTCCGGATGGCATTCTAGATT 492
consensus_8893#0 TGAATAATGCTGCAGAAACACTAGAGGTTCAAAAACGGCGTATATATGATATTACCAATG 840
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 TGAATAATGCTGCAGAAACACTAGAGGTTCAAAAACGGCGTATATATGATATTACCAATG 552
consensus_8893#0 TACTTGAAGGAATAGGGTTGATTGAAAAGACACTCAAGAACAGAATCCGTTGGAAGGGCT 900
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 TACTTGAAGGAATAGGGTTGATTGAAAAGACACTCAAGAACAGAATCCGTTGGAAGGGCT 612
consensus_8893#0 TGGATGATTCAGGAGTGGAATTAGATAATGGTCTTTCAGCTTTGCAGGCAGAAGTTGAAA 960
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 TGGATGATTCAGGAGTGGAATTAGATAATGGTCTTTCAGCTTTGCAGGCAGAAGTTGAAA 672
consensus_8893#0 ATCTTAGTCTGAAGGAGCAAGCATTAGATGAGCGCATAAGTGATATGCGTGAAAAACTAA 1020
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 ATCTTAGTCTGAAGGAGCAAGCATTAGATGAGCGCATAAGTGATATGCGTGAAAAACTAA 732
consensus_8893#0 GAGGTTTAACTGAAGATGAAAACAATCAAAGATGGCTCTATGTGACAGAAGATGATATCA 1080
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 GAGGTTTAACTGAAGATGAAAACAATCAAAGATGGCTCTATGTGACAGAAGATGATATCA 792
consensus_8893#0 AGGGATTACCCTGCTTTCAGAATGAAACACTAATTGCAATAAAAGCTCCTCATGGCACTA 1140
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 AGGGATTACCCTGCTTTCAGAATGAAACACTAATTGCAATAAAAGCTCCTCATGGCACTA 852
consensus_8893#0 CACTTGAAGTCCCAGATCCTGACGAGGCTGGTGATTATCTCCAGAGAAGATATAGAATCG 1200
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 CACTTGAAGTCCCAGATCCTGACGAGGCTGGTGATTATCTCCAGAGAAGATATAGAATCG 912
consensus_8893#0 TATTAAGAAGTACAATGGGCCCAATAGATGTCTACTTAGTTAGTCAATTTGATGAGAAAT 1260
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 TATTAAGAAGTACAATGGGCCCAATAGATGTCTACTTAGTTAGTCAATTTGATGAGAAAT 972
consensus_8893#0 TTGAGGACTTGGGTGGGGGTGCAACACCATCAGGGCATGCAAATGTACCAAAACATCAAC 1320
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 TTGAGGACTTGGGTGGGGGTGCAACACCATCAGGGCATGCAAATGTACCAAAACATCAAC 1032
consensus_8893#0 CTACTGAAGTCTTCAATACAACAAATGCTGGGGTTGGGCAATGTAGCAACTCAGTTGCTG 1380
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 CTACTGAAGTCTTCAATACAACAAATGCTGGGGTTGGGCAATGTAGCAACTCAGTTGCTG 1092
consensus_8893#0 TGGACAATAATATTCAGCACAGCCAGACGATTCCTCAGGATCCTAGTGCTTCACATGATT 1440
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 TGGACAATAATATTCAGCACAGCCAGACGATTCCTCAGGATCCTAGTGCTTCACATGATT 1152
consensus_8893#0 TTGGAGGAATGACAAGGATTATCCCTTCAGATATTGATACTGATGCTGATTACTGGCTCA 1500
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 TTGGAGGAATGACAAGGATTATCCCTTCAGATATTGATACTGATGCTGATTACTGGCTCA 1212
consensus_8893#0 TATCAGAAGGGGATGTCAGCATTACTGATATGTGGAAAACAGCACCAGATGTGCAGTGGG 1560
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 TATCAGAAGGGGATGTCAGCATTACTGATATGTGGAAAACAGCACCAGATGTGCAGTGGG 1272
consensus_8893#0 ATGAGAGCCTGGATACGGATGTCTTCCTATCTGAAGACGTTAGAACGCCAAGTTCACACA 1620
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 ATGAGAGCCTGGATACGGATGTCTTCCTATCTGAAGACGTTAGAACGCCAAGTTCACACA 1332
consensus_8893#0 ATCAGCAGCCATCTGCAGTGGGCGGGCCACAGATGCAGGTCTCAGACATGCATAAACCCT 1680
consensus_8893#2 ------------------------------------------------------------
consensus_8893#1 ATCAGCAGCCATCTGCAGTGGGCGGGCCACAGATGCAGGTCTCAGACATGCATAAACCCT 1392
consensus_8893#0 AGGATCACAGGGGTTACAGAAGTGAAAAGATGACATCTGGAATTCCTGGAGCGGTGTTTG 1740
consensus_8893#2 ------------------------------------------------------AGACAA 6
consensus_8893#1 AGGATCACAGGGGTTACAGAAGTGAAAAGATGACATCTGGAATTCCTGGAGCGGTGTTTG 1452
*
consensus_8893#0 TAGTGAAAAGTGAAAGCATGACAGCAAATGCTCATTGCCAAATTGTAAAGAGCCGGGTGG 1800
consensus_8893#2 GGGGGAAAAGTGAAAGCATGACAGCAAATGCTCATTGCCAAATTGTAAAGAGCCGGGTGG 66
consensus_8893#1 TAGTGAAAAGTGAAAGCATGACAGCAAATGCTCATTGCCAAATTGTAAAGAGCCGGGTGG 1512
* ********************************************************
consensus_8893#0 TCTTCATCAGAATATCTGCATCTTCTCGAGACACCAAGTCCGTGCGAGAGATCAGGATGA 1860
consensus_8893#2 TCTTCATCAGAATATTTGCATCTTCTCGAGACACCAAGTCCGTGCGAGAGATCAGGATGA 126
consensus_8893#1 TCTTCATCAGAATATCTGCATCTTCTCGAGACACCAAGTCCGTGCGAGAGATCAGGATGA 1572
*************** ********************************************
consensus_8893#0 CACCATTCCGGATTCACATCTGCTGTGGAGGCTGGTGGCGTCAACTAACTTACCAGCCTG 1920
consensus_8893#2 CCCCATTCCGGATTCACATTTGCTGTGGAGGCTGGTGGCGTCAACTAACTTACCAGCCTG 186
consensus_8893#1 CACCATTCCGGATTCACATCTGCTGTGGAGGCTGGTGGCGTCAACTAACTTACCAGCCTG 1632
* ***************** ****************************************
consensus_8893#0 CTGTTTCAGCACCCTGCTTCAGTCGAACGGGAGTAAATCTTGCTGCTGCTTTCGCTGTGA 1980
consensus_8893#2 CTGTTTCAGCACCCTGCTTCAGTCGAACGGGAGTAAATCTTGCTGCTGCTTTCGCTGTGA 246
consensus_8893#1 CTGTTTCAGCACCCTGCTTCAGTCGAACGGGAGTAAATCTTGCTGCTGCTTTCGCTGTGA 1692
************************************************************
consensus_8893#0 AGCCTGCTGCGGTGCTCATTAAGGCACTGATATATTTTTTGCATTCAAAACTAACTAGTC 2040
consensus_8893#2 AGCCTGTTGCGGTGCTCATTAAGGCACTGATATATTTTTTGCATTCAAAACTAACTAGTT 306
consensus_8893#1 AGCCTGCTGCGGTGCTCATTAAGGCACTGATATATTTTTTGCATTCAAAACTAACTAGTC 1752
****** ****************************************************
consensus_8893#0 ATCAGCAAGGAAACGGTGGGCTTTGCTGTGCTCTGTCGAGTATTCTTTGAAAATTCTTTG 2100
consensus_8893#2 ATCAGCAAGGAAACGGTGGGCTTTGCTGTGCTCTGTCGAGTATTCTTTGAAAATTCTTTG 366
consensus_8893#1 ATCAGCAAGGAAACGGTGGGCTTTGCTGTGCTCTGTCGAGTATTCTTTGAAAATTCTTTG 1812
************************************************************
consensus_8893#0 TACATTGGGAGGTATAAGGGCATGCAGGGCTCGAGTTATTGGTTTGACGGGAGCAATGAG 2160
consensus_8893#2 TACATTGGGAGGTATAAGGGCATGCAGGGCTCGAGTTATTGGTTTGACGGGAGCAATGAG 426
consensus_8893#1 TACATTGGGAGGTATAAGGGCATGCAGGGCTCGAGTTATTGGTTTGACGGGAGCAATGAG 1872
************************************************************
consensus_8893#0 CTGAGTTAATGATGTAACCGAGCCGTCTTTGTAAATTGTTCCATGCTCTTCCTCAAATAC 2220
consensus_8893#2 CTGAGTTAATGATGTAACCGAGCCGTCTTTGTAAATTGTTACATGCTCTTCCTCAAATAC 486
consensus_8893#1 CTGAGTTAATGATGTAACCGAGCCGTCTTTGTAAATTGTTCCATGCTCTTCCTCAAATAC 1932
**************************************** *******************
consensus_8893#0 AATGGATAGACTTTCATTTTGAGATATGATGCTTCAGTAGTCATTTGCTAGTCACCATGG 2280
consensus_8893#2 AATGGATAGACTTTCATTTTGAGATATGATGCTTCAGTAGTCATTTGCTAGTCCCCATGG 546
consensus_8893#1 AATGGATAGACTTTCATTTTGAAAAAAAAA-----AAAAAAAAAAAACTA--CACAAACA 1985
********************** * * * * * * *** * * *
consensus_8893#0 AGTGATGTGATATCTTTGCTACTGGTATGAACCTCAAAATGATACTCGCC---------- 2330
consensus_8893#2 AGTGATGTGATATCTTTGCTACTGGTATGAACCTCAAAATGATACTCGCCGTTAATTTTA 606
consensus_8893#1 AGCGAAACTAAATTAATCAAGGTAGTACATACA--------------------------- 2018
** ** * ** * * *** **
consensus_8893#0 -------------------
consensus_8893#2 AAAAAAAAAAAAAAAAAAA 625
consensus_8893#1 -------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||