cluster # 8894

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Oryza sativa
cluster # 8894 cluster # 8894 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8894#0 length = 2276 sequences # 6
consensusID : consensus_8894#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2276
fasta sequence
                              [TCCTCCTCCTGCTGCTGCGTTGCTCCCCTACCTAACCCCCTCTCTCTCCCTCATCTCGCTCCTCCTGCTGCTAGCTAATGCTGTATTTATTCCCACCACCTCCTCCCACTCTTCGTGCCTCGCCGGAGCAAGCAGTACCAGTGCACTGTTGGTTCGCTAGCAAGTCGGCATTAATCCGAGAGTGTGCATGCACCGGAGGAAGCTAGGTTAGCTTTGTTCCGGCCATGATCACGGTGGCGGCACCGGAGGCGCAGCCGCAGGTGGCGGCGGCGGTCGATGAGGCGCCGCCGGAGGCGGTGACGGTGTTCCGGTCCAAGCTTCCGGACATCGACATCCCCAGCCACCTGCCCCTGCACGAGTACTGCTTCGCCAGGGCGGCCGAGCTCCCCGACGCGCCGTGCCTCATCGCGGCGGCCACGGGGAGGACGTACACGTTCGCCGAGACGCGCCTGCTGTGCCGCAGGGCCGCCGCGGCGCTGCACCGGCTGGGCGTCGGCCACGGCGACCGCGTCATGGTGCTGCTCCAGAACTGCGTGGAGTTCGCCGTGGCGTTCTTCGCCGCGTCGTTCCTCGGCGCGGTCACCACCGCCGCCAACCCGTTCTGCACGCCGCAGGAGATCCACAAGCAGTTCAAGGCCTCCGGCGTGAAGCTCATCCTCACCCAGTCCGTCTACGTCGACAAGCTCCGGCAGCACGAGGCGTTCCCAAGGATCGACGCCTGCACCGTCGGCGACGACACGCTCACCGTGATCACCATCGACGACGACGAGGCGACGCCGGAAGGCTGCCTGCCGTTCTGGGACCTGATCGCGGACGCCGACGAGGGGTCCGTCCCGGAGGTGGCCATCTCGCCGGACGACCCCGTGGCGCTGCCGTTCTCGTCGGGCACGAC-GGGCTTGCCCAAGGGCGTGGTGCTGACGCACAGGAGCGTCGTGTCGGGCGTGGCGCAGCAGGTGGACGGCGAGAACCCGAACCTGCACATGGGTGCCGGCGACGTGGCGCTGTGCGTGCTGCCGCTGTTCCACATCTTCTCGCTCAACTCCGTGCTGCTGT-GCGCGGTGCGCGCCGGCG-CGGCGGTGGCGCTGATGCCCAGGTTCGAGATGGGCGCCATGCTGGGGGCCATCGAGCGGTGGCGCGTGACGGTGGCGGCCGTCGTGCCGCCGCTCGTGCTCGCGCTCGCCAAGAACCCGTTCGTGGAGCGCCACGACCTCAGCTCCATCCGCATCGTGCTCTCCGGCGCCGCCCCGCTCGGCAAGGAGCTCGAGGACGCCCTCCGCGCCCGCCTGCCTCAGGCCATCTTCGGACAGGGATACGGGATGACGGAGGCGGGGCCGGTGCTGTCGATGTGCCCGGCGTTCGCCAAGGAGCCGACGCCGGCGAAGTCCGGGTCGTGCGGGACGGTGGTGCGGAACGCGGAGCTCAAGGTGGTCGACCCGGACACGGGCTTCTCCCTCGGCCGCAACCTCCCCGGCGAGATCTGCATCCGCGGCCCACAGATCATGAAAGGTTACCTGAACGATCCCGAGGCGACCGCCGCGACGATCGACGTCGAGGGGTGGCTGCACACCGGCGACATCGGCTACGTCGACGACGACGACGAGGTCTTCATCGTCGACCGTGTCAAGGAGCTCATCAAATTCAAGGGGTTCCAGGTGCCGCCGGCCGAGCTGGAGTCGCTGCTCATCGCTCACCCGTCCATCGCTGACGCCGCCGTCGTCCCGCAAAAGGATGACGTCGCCGGCGAGGTCCCGGTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACA-TCA-CGGA-GGAGTCCATCAAGGAATTCATATCCAAGCAGGTGGTGTTCTACAAGAGGCTACACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAGCCAAGCTCGCGGCGTGCTGACCATGTCAATGATGGATAATGATGGCTAGGCTATACATGCGTTCTACTATGTATTACTCTGAAAATGCAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTATTCTTTTTGCTAGCCAGTATACTGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACTGCGGCA-AACTTGGCAACTTTTTAGTATATGATCAAAACAAACGTGTACAATGTAGCATTTGTACGTGTTGTTGCCAGTTGGGGAATACGACTACCGTGTATTGGATTCATGATTTACATATATCAGTATTGGTTCATCAAAAAAA]

[+] EMBL AK105636             [TCCTCCTCCTGCTGCTGCGTTGCTCCCCTACCTAACCCCCTCTCTCTCCCTCATCTCGCTCCTCCTGCTGCTAGCTAATGCTGTATTTATTCCCACCACCTCCTCCCACTCTTCGTGCCTCGCCGGAGCAAGCAGTACCAGTGCACTGTTGGTTCGCTAGCAAGTCGGCATTAATCCGAGAGTGTGCATGCACCGGAGGAAGCTAGGTTAGCTTTGTTCCGGCCATGATCACGGTGGCGGCACCGGAGGCGCAGCCGCAGGTGGCGGCGGCGGTCGATGAGGCGCCGCCGGAGGCGGTGACGGTGTTCCGGTCCAAGCTTCCGGACATCGACATCCCCAGCCACCTGCCCCTGCACGAGTACTGCTTCGCCAGGGCGGCCGAGCTCCCCGACGCGCCGTGCCTCATCGCGGCGGCCACGGGGAGGACGTACACGTTCGCCGAGACGCGCCTGCTGTGCCGCAGGGCCGCCGCGGCGCTGCACCGGCTGGGCGTCGGCCACGGCGACCGCGTCATGGTGCTGCTCCAGAACTGCGTGGAGTTCGCCGTGGCGTTCTTCGCCGCGTCGTTCCTCGGCGCGGTCACCACCGCCGCCAACCCGTTCTGCACGCCGCAGGAGATCCACAAGCAGTTCAAGGCCTCCGGCGTGAAGCTCATCCTCACCCAGTCCGTCTACGTCGACAAGCTCCGGCAGCACGAGGCGTTCCCAAGGATCGACGCCTGCACCGTCGGCGACGACACGCTCACCGTGATCACCATCGACGACGACGAGGCGACGCCGGAAGGCTGCCTGCCGTTCTGGGACCTGATCGCGGACGCCGACGAGGGGTCCGTCCCGGAGGTGGCCATCTCGCCGGACGACCCCGTGGCGCTGCCGTTCTCGTCGGGCACGAC GGGCTTGCCCAAGGGCGTGGTGCTGACGCACAGGAGCGTCGTGTCGGGCGTGGCGCAGCAGGTGGACGGCGAGAACCCGAACCTGCACATGGGTGCCGGCGACGTGGCGCTGTGCGTGCTGCCGCTGTTCCACATCTTCTCGCTCAACTCCGTGCTGCTGT GCGCGGTGCGCGCCGGCG CGGCGGTGGCGCTGATGCCCAGGTTCGAGATGGGCGCCATGCTGGGGGCCATCGAGCGGTGGCGCGTGACGGTGGCGGCCGTCGTGCCGCCGCTCGTGCTCGCGCTCGCCAAGAACCCGTTCGTGGAGCGCCACGACCTCAGCTCCATCCGCATCGTGCTCTCCGGCGCCGCCCCGCTCGGCAAGGAGCTCGAGGACGCCCTCCGCGCCCGCCTGCCTCAGGCCATCTTCGGACAGGGATACGGGATGACGGAGGCGGGGCCGGTGCTGTCGATGTGCCCGGCGTTCGCCAAGGAGCCGACGCCGGCGAAGTCCGGGTCGTGCGGGACGGTGGTGCGGAACGCGGAGCTCAAGGTGGTCGACCCGGACACGGGCTTCTCCCTCGGCCGCAACCTCCCCGGCGAGATCTGCATCCGCGGCCCACAGATCATGAAAGGTTACCTGAACGATCCCGAGGCGACCGCCGCGACGATCGACGTCGAGGGGTGGCTGCACACCGGCGACATCGGCTACGTCGACGACGACGACGAGGTCTTCATCGTCGACCGTGTCAAGGAGCTCATCAAATTCAAGGGGTTCCAGGTGCCGCCGGCCGAGCTGGAGTCGCTGCTCATCGCTCACCCGTCCATCGCTGACGCCGCCGTCGTCCCGCAAAAGGATGACGTCGCCGGCGAGGTCCCGGTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACA TCA CGGA GGAGTCCATCAAGGAATTCATATCCAAGCAGGTGGTGTTCTACAAGAGGCTACACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAGCCAAGCTCGCGGCGTGCTGACCATGTCAATGATGGATAATGATGGCTAGGCTATACATGCGTTCTACTATGTATTACTCTGAAAATGCAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTATTCTTTTTGCTAGCCAGTATACTGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACTGCGGCA AACTTGGCAACTTTTTAGTATATGATCAAAACAAACGTGTACAATGTAGCATTTGTACGTGTTGTTGCCAGTTGGGGAATACGACTACCGTGTATTGGATTCATGATTTACATATATCAGTATTGGTTCATC       ]
[+] EMBL OS4CL2R              [                                                                                                                                                                                                                               CATGATCACGGTGGCGGCACCGGAGGCGCAGCCGCAGGTGGCGGCGGCGGTCGATGAGGCGCCGCCGGAGGCGGTGACGGTGTTCCGGTCCAAGCTTCCGGACATCGACATCCCCAGCCACCTGCCCCTGCACGAGTACTGCTTCGCCAGGGCGGCCGAGCTCCCCGACGCGCCGTGCCTCATCGCGGCGGCCACGGGGAGGACGTACACGTTCGCCGAGACGCGCCTGCTGTGCCGCAGGGCCGCCGCGGCGCTGCACCGGCTGGGCGTCGGCCACGGCGACCGCGTCATGGTGCTGCTCCAGAACTGCGTGGAGTTCGCCGTGGCGTTCTTCGCCGCGTCGTTCCTCGGCGCGGTCACCACCGCCGCCAACCCGTTCTGCACGCCGCAGGAGATCCACAAGCAGTTCAAGGGCTCCGGCGTGAAGCTCATCCTCACCCAGTCCGTCTACGTCGACAAGCTCCGGCAGCACGAGGCGTTCCCAAGGATCGACGCCTGCACCGTCGGCGACGACACGCTCACCGTGATCACCATCGACGACGACGAGGCGACGCCGAAAGCGTGCCTGCCGTTCTGGGACCTGATCGCGGACGCCGACGAGGGGTCCGTCCCGGAGGTGGCCATCTCGCCGGACGACCCCGTGGCGCTGCCGTTCTCGTCGGGCACGACGGGGCTTG CCAAGGGCGTGGTGCTGACGCACAGGAGCGTCGTGTCGGGCGTGGCGCACGAGGTGGACGGCGAGAACCCGAACCTGCACATGGGTGCCGGCGACGTGGCGCTGTGCGTGCTGCCGCTGTTCCACATCTTCTCGCTCAACTCCGTGCTGCTGTCGCG GGTGCG GCCGGCGCCGGCGGTGGCGCTGATGCCCAGGTTCGAGATGGGCGCCATGCTGGGGGCCATCGAGCGGTGGCGCGTGACGGTCGGGGCCGTCGTGCCGCCGCTCGTCGTCGCGCTCGCCAAGAACCCGTTCGTGGAGCGCCACGACCTCAGCTCCATCCGCATCGTGCTCTCCGGCGCCGCCCCGCTCGGCAAGGAGCTCGAGGACGCCCTCCGCGCCCGCCTGCCTCAGGCCATCTTCGGACAGGGATACGGGATGACGGAGGCGGGGCCGGTGCTGTCGATGTGCCCCGCGTTCGCCAAGGAGCCGACGCCGGCGAAGTCCGGGTCGTGCGGGACGGTGGTGCGGAACGCGGAGCTCAAGGTGGTCGACCCGGACACGGGCTTCTCCCTCGGCCGCAACCTCCCCGGCGAGATCTGCATCCGCGGCCCACAGATCATGAAAGGTTACCTGAACGATCCCGAGGCGACCGCCGCGACGATCGACGTCGAGGGGTGGCTGCACACCGGCAACATCGGCTACGTCGACGACGACGACGAGGTCTTCATCGTCGACCGTGTCAAGGAGCTCATCAAATTCAAGGGGTTCCAGGTGCCGCCGGCCGAGCTGGAGTCGCTGCTCATCGCTCACCCGTCCATCCGTGACGCCGCCGTCGTCCCGCAAAAGGATGACGTCGCCGGCGAGGTCCCGGTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACA TCA CGGA GGAGTCCATCAAGGAATTCATATCCAAGCAGGTGGTGTTCTACAAGAGGCTACACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAGCCAAGCTCGCGGCGTGCTGACCATGTCAATGATGGATAATGATGGCTAGGCTATACATGCGTTCTACTATGTATTACTCTGAAAATGCAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTAT                                                                                                                                                                                                               ]
[+] EMBL BI806812             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGTTCCC GTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACATTCATCGGAGGGAGTCCATCAAGGAATTCATATCCAA CAGGTGGTGTTNTACAAGAGGCTACACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAGCCAAGCTCGCGGCGTGCTGACCATGTCAATGATGGATAATGATGGCTAGGCTATACATGCGTTCTACTATGTATTACTCTGAAAATGCAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTATTCTTTTTGCTAGCCAGTATACTGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACTGCGGCA AACTTGGCAACTTTTTAGTATATGATCNAAAC AACGTGTACAATGTAGCATTTGTACGTGTTGTTGCCAGTTGGGGAATACGACTACCGTGTATTGGATTCATGATTTACATATATCAGTATTGGTTCAAAAAAAAAA]
[+] EMBL BM421059             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GTTCGTGGTCCGCGCCGCCGACTCCGACA TCA CGGA GGAGTCCATCAAGGAATTCATATCCAAGCAGGTGGTGTTCTACAAGAGGCTACACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAACCAAGCTCGCGGCGTGCTGACCATGTCAATGATGGATAATGATGGCTAGGCTATACATGCGTTCTACTATGTATTACTCTGAAAATGCAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTATTCTTTTTGCTAGCCAGTATACTGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACTGCGGCATAACTTGGCAACTTTTTAGTATATGATC AAACAAACGTGTACAATGTAGCATTTGTACGTGTTGTTGCCAGTTGGGGAATACGACTACCGTGTATTGGATTCATGATTTAaaaaaaaaa                    ]
[+] EMBL BM038450             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TACTGAGGAGAGAGCTCAGAACCAAGCTCGCGGCGTGCTGACCATGTCCATGATGGATAATGATGGCTAGGCTATACATGCGTTCTACTATGTATTACTCTGAAAAT CAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTATTCTTTTTGCTA CC GTATACTGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACT C GCC AACTT GCAACTTTTTAGTATATGA C AAACCAACGTGTACCATGTA C TTTGTACGTGTTGTT CC GTTGGGGAATACGACTACC TGTATTGGATTCATGATTTAaaaaaaaa                     ]
[+] EMBL AK060627             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAGTTTATTCTTTTTGCTAGCCAGTATACTGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACTGCGGCA AACTTGGCAACTTTTTAGTATATGATCAAAACAAACGTGTACAATGTAGCATTTGTACGTGTTGTTGCCAGTTGGGGAATACGACTACCGTGTATTGGATTCATGATTTACATATATCAGTATTGGTTCATC       ]




>consensus_8894#0
TCCTCCTCCTGCTGCTGCGTTGCTCCCCTACCTAACCCCCTCTCTCTCCCTCATCTCGCT
CCTCCTGCTGCTAGCTAATGCTGTATTTATTCCCACCACCTCCTCCCACTCTTCGTGCCT
CGCCGGAGCAAGCAGTACCAGTGCACTGTTGGTTCGCTAGCAAGTCGGCATTAATCCGAG
AGTGTGCATGCACCGGAGGAAGCTAGGTTAGCTTTGTTCCGGCCATGATCACGGTGGCGG
CACCGGAGGCGCAGCCGCAGGTGGCGGCGGCGGTCGATGAGGCGCCGCCGGAGGCGGTGA
CGGTGTTCCGGTCCAAGCTTCCGGACATCGACATCCCCAGCCACCTGCCCCTGCACGAGT
ACTGCTTCGCCAGGGCGGCCGAGCTCCCCGACGCGCCGTGCCTCATCGCGGCGGCCACGG
GGAGGACGTACACGTTCGCCGAGACGCGCCTGCTGTGCCGCAGGGCCGCCGCGGCGCTGC
ACCGGCTGGGCGTCGGCCACGGCGACCGCGTCATGGTGCTGCTCCAGAACTGCGTGGAGT
TCGCCGTGGCGTTCTTCGCCGCGTCGTTCCTCGGCGCGGTCACCACCGCCGCCAACCCGT
TCTGCACGCCGCAGGAGATCCACAAGCAGTTCAAGGCCTCCGGCGTGAAGCTCATCCTCA
CCCAGTCCGTCTACGTCGACAAGCTCCGGCAGCACGAGGCGTTCCCAAGGATCGACGCCT
GCACCGTCGGCGACGACACGCTCACCGTGATCACCATCGACGACGACGAGGCGACGCCGG
AAGGCTGCCTGCCGTTCTGGGACCTGATCGCGGACGCCGACGAGGGGTCCGTCCCGGAGG
TGGCCATCTCGCCGGACGACCCCGTGGCGCTGCCGTTCTCGTCGGGCACGACGGGCTTGC
CCAAGGGCGTGGTGCTGACGCACAGGAGCGTCGTGTCGGGCGTGGCGCAGCAGGTGGACG
GCGAGAACCCGAACCTGCACATGGGTGCCGGCGACGTGGCGCTGTGCGTGCTGCCGCTGT
TCCACATCTTCTCGCTCAACTCCGTGCTGCTGTGCGCGGTGCGCGCCGGCGCGGCGGTGG
CGCTGATGCCCAGGTTCGAGATGGGCGCCATGCTGGGGGCCATCGAGCGGTGGCGCGTGA
CGGTGGCGGCCGTCGTGCCGCCGCTCGTGCTCGCGCTCGCCAAGAACCCGTTCGTGGAGC
GCCACGACCTCAGCTCCATCCGCATCGTGCTCTCCGGCGCCGCCCCGCTCGGCAAGGAGC
TCGAGGACGCCCTCCGCGCCCGCCTGCCTCAGGCCATCTTCGGACAGGGATACGGGATGA
CGGAGGCGGGGCCGGTGCTGTCGATGTGCCCGGCGTTCGCCAAGGAGCCGACGCCGGCGA
AGTCCGGGTCGTGCGGGACGGTGGTGCGGAACGCGGAGCTCAAGGTGGTCGACCCGGACA
CGGGCTTCTCCCTCGGCCGCAACCTCCCCGGCGAGATCTGCATCCGCGGCCCACAGATCA
TGAAAGGTTACCTGAACGATCCCGAGGCGACCGCCGCGACGATCGACGTCGAGGGGTGGC
TGCACACCGGCGACATCGGCTACGTCGACGACGACGACGAGGTCTTCATCGTCGACCGTG
TCAAGGAGCTCATCAAATTCAAGGGGTTCCAGGTGCCGCCGGCCGAGCTGGAGTCGCTGC
TCATCGCTCACCCGTCCATCGCTGACGCCGCCGTCGTCCCGCAAAAGGATGACGTCGCCG
GCGAGGTCCCGGTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACATCACGGAGGAGTCCA
TCAAGGAATTCATATCCAAGCAGGTGGTGTTCTACAAGAGGCTACACAAGGTGCACTTCA
TCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAGCCAAGC
TCGCGGCGTGCTGACCATGTCAATGATGGATAATGATGGCTAGGCTATACATGCGTTCTA
CTATGTATTACTCTGAAAATGCAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACG
AGATTTATTTTCTGAGAAAAAAAAGTTTATTCTTTTTGCTAGCCAGTATACTGCTGAATT
TGATGCCAGGCGCACATTTGCGAAAGAAACTGCGGCAAACTTGGCAACTTTTTAGTATAT
GATCAAAACAAACGTGTACAATGTAGCATTTGTACGTGTTGTTGCCAGTTGGGGAATACG
ACTACCGTGTATTGGATTCATGATTTACATATATCAGTATTGGTTCATCAAAAAAA
clustalw multiple alignements is not computed in this case