These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8901#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1798 fasta sequence [CGCACACCACCAAATCGCCAACCAAAAAGCAAACCCCCGCGTCTTCTCCGATCAGCTCCGCTCGCTCGCCGCCGACGAGCTCGCCCCGCCGCCGACGGCGACGGCGCATGCTAGCTGCGTATAGCCCGCGGCGGAGATGAGGTCATCCAGCGATTGCAAGGTTGTGGCGGCGGCGGCGAGGAAGAAGGAGAAGGAGGCGGCGGCGTGGCCGTGGTCGCTGTGGGGGTTCCTCCTGACCGGCTGCCTCGGCGGCGGCGGCGGCGGAGGGAAGAAGAAGAGCGGGGGGAAGAAGGTGCGTCCCCGCGGCGGCGGCGGCGGCGGCCTGCGGCGGCTGTCGTTCACGGACCTGACGGGGGCGGCGGACCAGGACCTGTCGGTGTCGCTGGTGGGGTCCAACCTCCACGTCTTCACCGTCGCCGAGCTCCGCGACGCCACCCGCGGGTTCGTCTCCGGCAACTTCCTCGGCGAGGGCGGCTTCGGGCCGGTCTACAAGGGCCTCGTCGGCGACGGCGTCAAGCCGGGCCTCCGCCCGCAGGCCATCGCCGTCAAGCTCTGGGATCCCGAGGGCGCCCAGGGCCACAAGGAATGGCTGGCAGAGGTGATCTTCCTTGGCCAGCTTCGGCATCCCAACCTGGTGAAGCTGGTCGGCTACTGCTGCGAGGACGAGAACCGCCTCCTCGTCTACGAGTACATGGAGCATGGCAGCCTCGAGAACCACCTCTTCAAACAGATTCCTGCAGTGCTGCCGTGGTCGACCCGATTAAACATCGCGGTTGGCGCCGCGAAGGGTTTGGCGTTCCTCCACGACGCAGAGAAGCCGGTCATCTACCGTGACTTCAAGGCCTCCAACATCCTGCTCGATTCGGATTACAAGGCGAAGCTG-TCGGACTTCGGGCTGGCCAAGGACGGGCCGGAGGGGGACGACACCCACGTGTCGACGCGCGTGATGGGCACCCATGGCTACGCCGCGCCGGAGTACATCATGACCGGCCACCTGACGGCGAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCCTGGAGATCCTGACGGGGCGGCGCGCCGTCGACAAGACGC-GGCCGAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCTCATCCGGATCATGGACCCGGCGCTGGAGGGGCGCTACTCGCCGGCGGCGGCGAGGGAGGCGGCCGCCGTCGCCTACCGGTGCCTCAGCGGGAGCCCCAAGAACCGCCCCGACATGTCCGCCGTCGTCGACGCGCTCGAGCCGCTGCTCGTCGCCACCGACGACGTCCCCCTCGGCCCCGTCGTGCTGTTCGTCGCGCCGGATCAGGAGGCCGACGCCGCCGCCGCCGCCGACGACGACGAGGACGACAAGGCCCGGCGGCGGCAGCGGCGGACGCGGAAGGACGAGCAGCACCGCCGCCGCAGCCGCCTCCGGACGTCGCCCAAGGGCAGCCCGAGGAAGCCCGCCGTCGCCGCTGCTTGCCGGAACGAGGAGTTCTGGGTGTGGCACGTCCCCGCCGACCACAAGGCGTGAGCGAGTGACACGTGGCGCGTTGCATCGCACGCCATGTCAGCCGCCGCTTTGCTTTGCTCCACGTGTGCGACGAACATTGTGTGTGTGTGTGATGAGGTCTAGTAGTAACACTGGTGATTTGATTAGGATTTGCATGCATCCCTGTACTCTGTTTGTTTCAGTGAGATGCAGAGTGAGAGAGCGATCAATTCATAATTCACAGCACAACGAAGATCAGATCAGAAAATATCTTATCAGGTCTCGTCT] [+] EMBL AK071281 [CGCACACCACCAAATCGCCAACCAAAAAGCAAACCCCCGCGTCTTCTCCGATCAGCTCCGCTCGCTCGCCGCCGACGAGCTCGCCCCGCCGCCGACGGCGACGGCGCATGCTAGCTGCGTATAGCCCGCGGCGGAGATGAGGTCATCCAGCGATTGCAAGGTTGTGGCGGCGGCGGCGAGGAAGAAGGAGAAGGAGGCGGCGGCGTGGCCGTGGTCGCTGTGGGGGTTCCTCCTGACCGGCTGCCTCGGCGGCGGCGGCGGCGGAGGGAAGAAGAAGAGCGGGGGGAAGAAGGTGCGTCCCCGCGGCGGCGGCGGCGGCGGCCTGCGGCGGCTGTCGTTCACGGACCTGACGGGGGCGGCGGACCAGGACCTGTCGGTGTCGCTGGTGGGGTCCAACCTCCACGTCTTCACCGTCGCCGAGCTCCGCGACGCCACCCGCGGGTTCGTCTCCGGCAACTTCCTCGGCGAGGGCGGCTTCGGGCCGGTCTACAAGGGCCTCGTCGGCGACGGCGTCAAGCCGGGCCTCCGCCCGCAGGCCATCGCCGTCAAGCTCTGGGATCCCGAGGGCGCCCAGGGCCACAAGGAATGGCTGGCAGAGGTGATCTTCCTTGGCCAGCTTCGGCATCCCAACCTGGTGAAGCTGGTCGGCTACTGCTGCGAGGACGAGAACCGCCTCCTCGTCTACGAGTACATGGAGCATGGCAGCCTCGAGAACCACCTCTTCAAACAGATTCCTGCAGTGCTGCCGTGGTCGACCCGATTAAACATCGCGGTTGGCGCCGCGAAGGGTTTGGCGTTCCTCCACGACGCAGAGAAGCCGGTCATCTACCGTGACTTCAAGGCCTCCAACATCCTGCTCGATTCGGATTACAAGGCGAAGCTG TCGGACTTCGGGCTGGCCAAGGACGGGCCGGAGGGGGACGACACCCACGTGTCGACGCGCGTGATGGGCACCCATGGCTACGCCGCGCCGGAGTACATCATGACCGGCCACCTGACGGCGAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCCTGGAGATCCTGACGGGGCGGCGCGCCGTCGACAAGACGC GGCCGAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCTCATCCGGATCATGGACCCGGCGCTGGAGGGGCGCTACTCGCCGGCGGCGGCGAGGGAGGCGGCCGCCGTCGCCTACCGGTGCCTCAGCGGGAGCCCCAAGAACCGCCCCGACATGTCCGCCGTCGTCGACGCGCTCGAGCCGCTGCTCGTCGCCACCGACGACGTCCCCCTCGGCCCCGTCGTGCTGTTCGTCGCGCCGGATCAGGAGGCCGACGCCGCCGCCGCCGCCGACGACGACGAGGACGACAAGGCCCGGCGGCGGCAGCGGCGGACGCGGAAGGACGAGCAGCACCGCCGCCGCAGCCGCCTCCGGACGTCGCCCAAGGGCAGCCCGAGGAAGCCCGCCGTCGCCGCTGCTTGCCGGAACGAGGAGTTCTGGGTGTGGCACGTCCCCGCCGACCACAAGGCGTGAGCGAGTGACACGTGGCGCGTTGCATCGCACGCCATGTCAGCCGCCGCTTTGCTTTGCTCCACGTGTGCGACGAACATTGTGTGTGTGTGTGATGAGGTCTAGTAGTAACACTGGTGATTTGATTAGGATTTGCATGCATCCCTGTACTCTGTTTGTTTCAGTGAGATGCAGAGTGAGAGAGCGATCAATTCATAATTCACAGCACAACGAAGATCAGATCAGAAAATATCTTATCAGGTCTCGTCT] [+] EMBL BI796082 [ TTC GCATCCCAACCT GTGAA CT GTC GCTACT CTGCGAGGACGAG ACCGCCTCCTCGTCTACGAGTACATGGAGCAT GCA CCTCGAGAACCACCTCTTCAAACAGATTCCTGCCGTGCT CCGTGGTCGACCCGATTAAACATCGCGGTTGGCGCCGCGAAGGGTTTGGCGTTCCTCCACGACGCAGAGAAGCCGGTCATCTACCGTGACTTCAAGGCCTCCAACATCCTGCTCGATTCGGATTACAAGGCGAAGCTG TCGGACTTCGGGCTGGCCAAGGACGGGCCGGAGGGGGACGACACCCACGTGTCGACGCGCGTGATGGGCACCCATGGCTACGCCGCGCCGGAGTACATCATGACCGGCCACCTGACGGCGAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCCTGGAGATCCTGACGGGGCGGCGCGCCGTCGACAAGACGC GGCCGAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCTCATCCGGATCATGGACCCGGCGCTGGAGGGGCGCTACTCGCCGGCGGCGG ] [+] EMBL C22548 [ CCTCTTCAAACAGATTCCTGCAGTGCTGCCGTGGTCGACCCGATTAAACATCGCGGTTGGCGCCGCGAAGGGTTTGGCGTTCCTCCACGACGCAGAGAAGCCGGTCATCTACCGTGACTTCAAGGCCTCCAACATCCTGCTCGATTCGGATTACAAGGCGAA CTGTTCGGACTTCGGGCTGGCCAAGGACGGGCCGGAGGGGGACGACACCCACGTGTCGACGCGCGTGATGGGCACCCATGGCTACGCCGCGCCGGAGTACATCATGACCGGCCACCTGACGGCGAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCCTGGAGATCCTGACGGGGGGGCGCGCCGTCGACAAGACGCGGGCCGAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCTCATCCGGATCATGGACCCGG ] [+] EMBL C22549 [ CTGCCGTGGTCGACCCGATTAAACATCGCGGTTGGCGCCGCGAAGGGTTTGGCGTTCCTCCACGACGCAGAGAAGCCGGTCATCTACCGTGACTTCAAGGCCTCCAACATCCTGCTCGATTCGGATTACAAGGCGAAGCTG TCGGACTTCGGGCTGGCCAAGGACGGGCCGGAGGGGGACGACACCCACGTGTCGACGCGCGTGATGGGCACCCATTGCTACGCCGCGCCGGAGTACATCATGACCGGCCACCTGACGGCGAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCCTGGAGATCCTGACGGGGCGGCGCGCCGTCGACAAGACGC GGCCGAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCTCATCCGGATCATGGACCCGGCGCTGGAGGGGCGCTACTC CCGGCGGCGGCGAGGG ] [-] EMBL CB678204 [ GCCGAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCTCATCCGGATCATGGACCCGGCGCTGGAGGGGCGCTACTCGCCGGCGGCGGCGAGGGAGGCGGCCGCCGTCGCCTACCGGTGCCTCAGCGGGAGCCCCAAGAACCGCCCCGACATGTCCGCCGTCGTCGACGCGCTCGAGCCGCTGCTCGTCGCCACCGACGACGTCCCCCTCGGCCCCGTCGTGCTGTTCGTCGCGCCGGATCAGGAGGCNGACGCCGCCGCCGCCGCCGACGACGACGAGGACGACAAGGCCCGGCGGCGGCAGCGGCGGACGCGGAAGGACGAGCAGCACCGCCGCCGCAGCCGCCTCCGGACGTCGCCCAAGGGCAGCCCGAGGAAGCCCGCCGTCGCCGCTGCTTGCCGGAACGAGGAGTTCTGGGTGTGGCACGTCCCCGCCGACCACAAGGCGTGAGCGAGTGACACGTGGCGCGTTGCATCGCACGCCATGTCAGCCGCCGCTTTGCTTTGCTCCACGTGTGCGACGAACATTGTGTGTGTGTGTGATGAGGTCTAGTAGTAACACTGGTGATTTGATTAGGATTTGCATGCATCCCTGTACTCTGTTTGTTTCAGTGAGATGCAGAGTGAGAGAGCGATCAATTCATAATTCAGAGCACAACGAAGATCAGATCAGAAAAaaaacc ] [+] EMBL AU176482 [ CGGGAGCCCCAAGAACCGCCCCGACATGTCCGCCGTCGTCGACGCGCTCGAGCCGCTGCTCGTCGCCACCGACGACGTCCCCCTCGGCCCCGTCGTGCTGTTCGTCGCGCCGGATCAGGAGGCCGACGCCGCCGCCGCCGCCGACGACGACGAGGACGACAAGGCCCGGCGGCGGCAGCGGCGGACGCGGAAGGACGAGCAGCACCGCCGCCGCAGCCGCCTCCGGACGTCGCCCAAGGGCAGCCCGAGGAAGCCCGCCGTCGCCGCTGCTTGCCGGAACG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||