cluster # 8901

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Oryza sativa
cluster # 8901 cluster # 8901 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8901#0 length = 1798 sequences # 6
consensusID : consensus_8901#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1798
fasta sequence
                              [CGCACACCACCAAATCGCCAACCAAAAAGCAAACCCCCGCGTCTTCTCCGATCAGCTCCGCTCGCTCGCCGCCGACGAGCTCGCCCCGCCGCCGACGGCGACGGCGCATGCTAGCTGCGTATAGCCCGCGGCGGAGATGAGGTCATCCAGCGATTGCAAGGTTGTGGCGGCGGCGGCGAGGAAGAAGGAGAAGGAGGCGGCGGCGTGGCCGTGGTCGCTGTGGGGGTTCCTCCTGACCGGCTGCCTCGGCGGCGGCGGCGGCGGAGGGAAGAAGAAGAGCGGGGGGAAGAAGGTGCGTCCCCGCGGCGGCGGCGGCGGCGGCCTGCGGCGGCTGTCGTTCACGGACCTGACGGGGGCGGCGGACCAGGACCTGTCGGTGTCGCTGGTGGGGTCCAACCTCCACGTCTTCACCGTCGCCGAGCTCCGCGACGCCACCCGCGGGTTCGTCTCCGGCAACTTCCTCGGCGAGGGCGGCTTCGGGCCGGTCTACAAGGGCCTCGTCGGCGACGGCGTCAAGCCGGGCCTCCGCCCGCAGGCCATCGCCGTCAAGCTCTGGGATCCCGAGGGCGCCCAGGGCCACAAGGAATGGCTGGCAGAGGTGATCTTCCTTGGCCAGCTTCGGCATCCCAACCTGGTGAAGCTGGTCGGCTACTGCTGCGAGGACGAGAACCGCCTCCTCGTCTACGAGTACATGGAGCATGGCAGCCTCGAGAACCACCTCTTCAAACAGATTCCTGCAGTGCTGCCGTGGTCGACCCGATTAAACATCGCGGTTGGCGCCGCGAAGGGTTTGGCGTTCCTCCACGACGCAGAGAAGCCGGTCATCTACCGTGACTTCAAGGCCTCCAACATCCTGCTCGATTCGGATTACAAGGCGAAGCTG-TCGGACTTCGGGCTGGCCAAGGACGGGCCGGAGGGGGACGACACCCACGTGTCGACGCGCGTGATGGGCACCCATGGCTACGCCGCGCCGGAGTACATCATGACCGGCCACCTGACGGCGAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCCTGGAGATCCTGACGGGGCGGCGCGCCGTCGACAAGACGC-GGCCGAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCTCATCCGGATCATGGACCCGGCGCTGGAGGGGCGCTACTCGCCGGCGGCGGCGAGGGAGGCGGCCGCCGTCGCCTACCGGTGCCTCAGCGGGAGCCCCAAGAACCGCCCCGACATGTCCGCCGTCGTCGACGCGCTCGAGCCGCTGCTCGTCGCCACCGACGACGTCCCCCTCGGCCCCGTCGTGCTGTTCGTCGCGCCGGATCAGGAGGCCGACGCCGCCGCCGCCGCCGACGACGACGAGGACGACAAGGCCCGGCGGCGGCAGCGGCGGACGCGGAAGGACGAGCAGCACCGCCGCCGCAGCCGCCTCCGGACGTCGCCCAAGGGCAGCCCGAGGAAGCCCGCCGTCGCCGCTGCTTGCCGGAACGAGGAGTTCTGGGTGTGGCACGTCCCCGCCGACCACAAGGCGTGAGCGAGTGACACGTGGCGCGTTGCATCGCACGCCATGTCAGCCGCCGCTTTGCTTTGCTCCACGTGTGCGACGAACATTGTGTGTGTGTGTGATGAGGTCTAGTAGTAACACTGGTGATTTGATTAGGATTTGCATGCATCCCTGTACTCTGTTTGTTTCAGTGAGATGCAGAGTGAGAGAGCGATCAATTCATAATTCACAGCACAACGAAGATCAGATCAGAAAATATCTTATCAGGTCTCGTCT]

[+] EMBL AK071281             [CGCACACCACCAAATCGCCAACCAAAAAGCAAACCCCCGCGTCTTCTCCGATCAGCTCCGCTCGCTCGCCGCCGACGAGCTCGCCCCGCCGCCGACGGCGACGGCGCATGCTAGCTGCGTATAGCCCGCGGCGGAGATGAGGTCATCCAGCGATTGCAAGGTTGTGGCGGCGGCGGCGAGGAAGAAGGAGAAGGAGGCGGCGGCGTGGCCGTGGTCGCTGTGGGGGTTCCTCCTGACCGGCTGCCTCGGCGGCGGCGGCGGCGGAGGGAAGAAGAAGAGCGGGGGGAAGAAGGTGCGTCCCCGCGGCGGCGGCGGCGGCGGCCTGCGGCGGCTGTCGTTCACGGACCTGACGGGGGCGGCGGACCAGGACCTGTCGGTGTCGCTGGTGGGGTCCAACCTCCACGTCTTCACCGTCGCCGAGCTCCGCGACGCCACCCGCGGGTTCGTCTCCGGCAACTTCCTCGGCGAGGGCGGCTTCGGGCCGGTCTACAAGGGCCTCGTCGGCGACGGCGTCAAGCCGGGCCTCCGCCCGCAGGCCATCGCCGTCAAGCTCTGGGATCCCGAGGGCGCCCAGGGCCACAAGGAATGGCTGGCAGAGGTGATCTTCCTTGGCCAGCTTCGGCATCCCAACCTGGTGAAGCTGGTCGGCTACTGCTGCGAGGACGAGAACCGCCTCCTCGTCTACGAGTACATGGAGCATGGCAGCCTCGAGAACCACCTCTTCAAACAGATTCCTGCAGTGCTGCCGTGGTCGACCCGATTAAACATCGCGGTTGGCGCCGCGAAGGGTTTGGCGTTCCTCCACGACGCAGAGAAGCCGGTCATCTACCGTGACTTCAAGGCCTCCAACATCCTGCTCGATTCGGATTACAAGGCGAAGCTG TCGGACTTCGGGCTGGCCAAGGACGGGCCGGAGGGGGACGACACCCACGTGTCGACGCGCGTGATGGGCACCCATGGCTACGCCGCGCCGGAGTACATCATGACCGGCCACCTGACGGCGAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCCTGGAGATCCTGACGGGGCGGCGCGCCGTCGACAAGACGC GGCCGAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCTCATCCGGATCATGGACCCGGCGCTGGAGGGGCGCTACTCGCCGGCGGCGGCGAGGGAGGCGGCCGCCGTCGCCTACCGGTGCCTCAGCGGGAGCCCCAAGAACCGCCCCGACATGTCCGCCGTCGTCGACGCGCTCGAGCCGCTGCTCGTCGCCACCGACGACGTCCCCCTCGGCCCCGTCGTGCTGTTCGTCGCGCCGGATCAGGAGGCCGACGCCGCCGCCGCCGCCGACGACGACGAGGACGACAAGGCCCGGCGGCGGCAGCGGCGGACGCGGAAGGACGAGCAGCACCGCCGCCGCAGCCGCCTCCGGACGTCGCCCAAGGGCAGCCCGAGGAAGCCCGCCGTCGCCGCTGCTTGCCGGAACGAGGAGTTCTGGGTGTGGCACGTCCCCGCCGACCACAAGGCGTGAGCGAGTGACACGTGGCGCGTTGCATCGCACGCCATGTCAGCCGCCGCTTTGCTTTGCTCCACGTGTGCGACGAACATTGTGTGTGTGTGTGATGAGGTCTAGTAGTAACACTGGTGATTTGATTAGGATTTGCATGCATCCCTGTACTCTGTTTGTTTCAGTGAGATGCAGAGTGAGAGAGCGATCAATTCATAATTCACAGCACAACGAAGATCAGATCAGAAAATATCTTATCAGGTCTCGTCT]
[+] EMBL BI796082             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTC GCATCCCAACCT GTGAA CT GTC GCTACT CTGCGAGGACGAG ACCGCCTCCTCGTCTACGAGTACATGGAGCAT GCA CCTCGAGAACCACCTCTTCAAACAGATTCCTGCCGTGCT CCGTGGTCGACCCGATTAAACATCGCGGTTGGCGCCGCGAAGGGTTTGGCGTTCCTCCACGACGCAGAGAAGCCGGTCATCTACCGTGACTTCAAGGCCTCCAACATCCTGCTCGATTCGGATTACAAGGCGAAGCTG TCGGACTTCGGGCTGGCCAAGGACGGGCCGGAGGGGGACGACACCCACGTGTCGACGCGCGTGATGGGCACCCATGGCTACGCCGCGCCGGAGTACATCATGACCGGCCACCTGACGGCGAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCCTGGAGATCCTGACGGGGCGGCGCGCCGTCGACAAGACGC GGCCGAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCTCATCCGGATCATGGACCCGGCGCTGGAGGGGCGCTACTCGCCGGCGGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C22548               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCTCTTCAAACAGATTCCTGCAGTGCTGCCGTGGTCGACCCGATTAAACATCGCGGTTGGCGCCGCGAAGGGTTTGGCGTTCCTCCACGACGCAGAGAAGCCGGTCATCTACCGTGACTTCAAGGCCTCCAACATCCTGCTCGATTCGGATTACAAGGCGAA CTGTTCGGACTTCGGGCTGGCCAAGGACGGGCCGGAGGGGGACGACACCCACGTGTCGACGCGCGTGATGGGCACCCATGGCTACGCCGCGCCGGAGTACATCATGACCGGCCACCTGACGGCGAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCCTGGAGATCCTGACGGGGGGGCGCGCCGTCGACAAGACGCGGGCCGAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCTCATCCGGATCATGGACCCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL C22549               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTGCCGTGGTCGACCCGATTAAACATCGCGGTTGGCGCCGCGAAGGGTTTGGCGTTCCTCCACGACGCAGAGAAGCCGGTCATCTACCGTGACTTCAAGGCCTCCAACATCCTGCTCGATTCGGATTACAAGGCGAAGCTG TCGGACTTCGGGCTGGCCAAGGACGGGCCGGAGGGGGACGACACCCACGTGTCGACGCGCGTGATGGGCACCCATTGCTACGCCGCGCCGGAGTACATCATGACCGGCCACCTGACGGCGAAGAGCGACGTGTACAGCTTCGGCGTGGTGCTCCTGGAGATCCTGACGGGGCGGCGCGCCGTCGACAAGACGC GGCCGAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCTCATCCGGATCATGGACCCGGCGCTGGAGGGGCGCTACTC CCGGCGGCGGCGAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB678204             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCCGAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCTCATCCGGATCATGGACCCGGCGCTGGAGGGGCGCTACTCGCCGGCGGCGGCGAGGGAGGCGGCCGCCGTCGCCTACCGGTGCCTCAGCGGGAGCCCCAAGAACCGCCCCGACATGTCCGCCGTCGTCGACGCGCTCGAGCCGCTGCTCGTCGCCACCGACGACGTCCCCCTCGGCCCCGTCGTGCTGTTCGTCGCGCCGGATCAGGAGGCNGACGCCGCCGCCGCCGCCGACGACGACGAGGACGACAAGGCCCGGCGGCGGCAGCGGCGGACGCGGAAGGACGAGCAGCACCGCCGCCGCAGCCGCCTCCGGACGTCGCCCAAGGGCAGCCCGAGGAAGCCCGCCGTCGCCGCTGCTTGCCGGAACGAGGAGTTCTGGGTGTGGCACGTCCCCGCCGACCACAAGGCGTGAGCGAGTGACACGTGGCGCGTTGCATCGCACGCCATGTCAGCCGCCGCTTTGCTTTGCTCCACGTGTGCGACGAACATTGTGTGTGTGTGTGATGAGGTCTAGTAGTAACACTGGTGATTTGATTAGGATTTGCATGCATCCCTGTACTCTGTTTGTTTCAGTGAGATGCAGAGTGAGAGAGCGATCAATTCATAATTCAGAGCACAACGAAGATCAGATCAGAAAAaaaacc              ]
[+] EMBL AU176482             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGGGAGCCCCAAGAACCGCCCCGACATGTCCGCCGTCGTCGACGCGCTCGAGCCGCTGCTCGTCGCCACCGACGACGTCCCCCTCGGCCCCGTCGTGCTGTTCGTCGCGCCGGATCAGGAGGCCGACGCCGCCGCCGCCGCCGACGACGACGAGGACGACAAGGCCCGGCGGCGGCAGCGGCGGACGCGGAAGGACGAGCAGCACCGCCGCCGCAGCCGCCTCCGGACGTCGCCCAAGGGCAGCCCGAGGAAGCCCGCCGTCGCCGCTGCTTGCCGGAACG                                                                                                                                                                                                                                                                                                  ]




>consensus_8901#0
CGCACACCACCAAATCGCCAACCAAAAAGCAAACCCCCGCGTCTTCTCCGATCAGCTCCG
CTCGCTCGCCGCCGACGAGCTCGCCCCGCCGCCGACGGCGACGGCGCATGCTAGCTGCGT
ATAGCCCGCGGCGGAGATGAGGTCATCCAGCGATTGCAAGGTTGTGGCGGCGGCGGCGAG
GAAGAAGGAGAAGGAGGCGGCGGCGTGGCCGTGGTCGCTGTGGGGGTTCCTCCTGACCGG
CTGCCTCGGCGGCGGCGGCGGCGGAGGGAAGAAGAAGAGCGGGGGGAAGAAGGTGCGTCC
CCGCGGCGGCGGCGGCGGCGGCCTGCGGCGGCTGTCGTTCACGGACCTGACGGGGGCGGC
GGACCAGGACCTGTCGGTGTCGCTGGTGGGGTCCAACCTCCACGTCTTCACCGTCGCCGA
GCTCCGCGACGCCACCCGCGGGTTCGTCTCCGGCAACTTCCTCGGCGAGGGCGGCTTCGG
GCCGGTCTACAAGGGCCTCGTCGGCGACGGCGTCAAGCCGGGCCTCCGCCCGCAGGCCAT
CGCCGTCAAGCTCTGGGATCCCGAGGGCGCCCAGGGCCACAAGGAATGGCTGGCAGAGGT
GATCTTCCTTGGCCAGCTTCGGCATCCCAACCTGGTGAAGCTGGTCGGCTACTGCTGCGA
GGACGAGAACCGCCTCCTCGTCTACGAGTACATGGAGCATGGCAGCCTCGAGAACCACCT
CTTCAAACAGATTCCTGCAGTGCTGCCGTGGTCGACCCGATTAAACATCGCGGTTGGCGC
CGCGAAGGGTTTGGCGTTCCTCCACGACGCAGAGAAGCCGGTCATCTACCGTGACTTCAA
GGCCTCCAACATCCTGCTCGATTCGGATTACAAGGCGAAGCTGTCGGACTTCGGGCTGGC
CAAGGACGGGCCGGAGGGGGACGACACCCACGTGTCGACGCGCGTGATGGGCACCCATGG
CTACGCCGCGCCGGAGTACATCATGACCGGCCACCTGACGGCGAAGAGCGACGTGTACAG
CTTCGGCGTGGTGCTCCTGGAGATCCTGACGGGGCGGCGCGCCGTCGACAAGACGCGGCC
GAACAGGGAGCAGAGCCTCGTGGAGTACGCGCGGCCGTGCCTGCGCGACCCGCTCCGGCT
CATCCGGATCATGGACCCGGCGCTGGAGGGGCGCTACTCGCCGGCGGCGGCGAGGGAGGC
GGCCGCCGTCGCCTACCGGTGCCTCAGCGGGAGCCCCAAGAACCGCCCCGACATGTCCGC
CGTCGTCGACGCGCTCGAGCCGCTGCTCGTCGCCACCGACGACGTCCCCCTCGGCCCCGT
CGTGCTGTTCGTCGCGCCGGATCAGGAGGCCGACGCCGCCGCCGCCGCCGACGACGACGA
GGACGACAAGGCCCGGCGGCGGCAGCGGCGGACGCGGAAGGACGAGCAGCACCGCCGCCG
CAGCCGCCTCCGGACGTCGCCCAAGGGCAGCCCGAGGAAGCCCGCCGTCGCCGCTGCTTG
CCGGAACGAGGAGTTCTGGGTGTGGCACGTCCCCGCCGACCACAAGGCGTGAGCGAGTGA
CACGTGGCGCGTTGCATCGCACGCCATGTCAGCCGCCGCTTTGCTTTGCTCCACGTGTGC
GACGAACATTGTGTGTGTGTGTGATGAGGTCTAGTAGTAACACTGGTGATTTGATTAGGA
TTTGCATGCATCCCTGTACTCTGTTTGTTTCAGTGAGATGCAGAGTGAGAGAGCGATCAA
TTCATAATTCACAGCACAACGAAGATCAGATCAGAAAATATCTTATCAGGTCTCGTCT
clustalw multiple alignements is not computed in this case