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Oryza sativa
cluster # 892 cluster # 892       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_892#0 length = 2522 sequences # 1  
 consensus_892#1 length = 1785 sequences # 1  
consensusID : consensus_892#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2522
fasta sequence 
                              [GTATTAGGATAGTCACAAAATTTATCTACATATATATGAAGCAAGTAAAGAAATATTATTCAAATGCTAGTTTCTCTATTTCTTAGCAACTGAAGTACTCAATCTATCCCAGAATAGTTTTTTACATGGTCTCTAACATAGAACTTTTTCCTTTTAATTTATTTTCCATAAGATATTATGAATGCTCTTTTAAATACGAATCTAATAATATCACATGCATGGCACAAAACATTGTTAGTTATTTTACTTATTAGTCAAGGGAAAATGTTGATTTTCCTAAATTATATTCTGAAAAAATGTCTCAATTGTTGGTGATATAGTACATGCAGATACAACAAAATTTCATAAGGACGTTAGATTGTTCGCATTTCCTGGGACATAAAAAAATCGTATGGATCTTATTTCAAAAAAAATTGTATGGAGAGGCTATACGCTATAATATTGTGCACATTTAACAAAAAGATTGTTGGTAGATAAAAAATCTATTTTCCCTAGAAGTGTAAGAGAATGTCTAGGTTTACCATTAGGGCAGTATTGTTAGTTAAATTAAAATCATTCTTTTTGTATCAACTCAAAATTATAACATTGGATAATACTATCAACTCAGAGAATAATCTGTTAATTGTTGATGATTTTCTCCAAATCTGGACTGCTAAAGAAATTATAAAACCAGTTACCATTGTTTTATTTTTGTCTGGTAACTGTTTTACTTTTCAGATTAACACTACAACAAGGCAATGTGGACATATGTTTAATATATTCAGTCTCCTAAACTCAGGAAGAAATTAATATTTTTTTATATTGTCTGTTATTAGAAATGAGCATCATTTTGGAACGTTCAGGTAAAATGTTATCCAGGATTGTTTTACAAATTGTCCTCAAGGAAAAGTTTGGACTATTTTGGTTTGAAGCCCTACAAAAAATTTTGTAATGCCAAAATTTAGGCATGTTTTGGCACTACCAATTTTTTTAGTTAAAATTGTCTAGTTAATGTTCCATTTGCTACCAATATGATGAGAATAAATTTCTAGAATGTGACCGAATAGAGCATGGCCAACAACAATTATTTCACTTCATTCCAAGCTATCCCTATTACTATTCAAGTTGCCAAAAGATTGGTAGAGCATATATTGGCATCAATCCAAAACGGTCCTTTGTAAACATTATTATGTGTATCGTCAATGCAAATGAGCAAATCTGCAGAAATTCTTAGAACATCAGGTGTTCATACTTTGTAATATTAAATGATAGTTGTGAACTAAGGCTGTGTTTAGTTCACATCAAAATTAGAAGTTTGGTTGAAATTGAAACGATGTGACGGAAAAGTTGGAAGTTTGTGTGTGTAGGAAAGTTTTGATGTGATGGAAAAGTTGGAAGTTTGAAGAATTATTTTGAAACTAAACATGACGCAAATAAATTGTAGCAAAATCCTTAATCATCCAGGATATTCTTTGGATTCTATTTAATGTAAGTTGGCATAATAGTTCAACAAATCGATTCTATCACCATGGAAAAAAATGTGTGTTTGGTTCACAGGGCATTCTTGCATTTTATGGCTTTCCAATTCCTACAATCTCCAAAGAGGCATCAGAAAATCATCCATCATCAATACCAAAGGGTGTGCTGTTCGTGCTAAAAACATTGCCGGTCAGATTTCACATGATATATCACCAGTATTGAGTAAAATAATGATTCTCACAAATCTAAACATTTATATCAGGTTAATGCAAAGTGCATAGTAGATGGTGATGGCTTTACTGCTTATGTCGACACACTGGATCCTATAGAACTGCGTCAGGATTGCAATGCAAGCTGTCAATCCCGTAACTCTGAGAAGCAAAAATTGTGGGACAAAACAGCAGCTGATCTACAAATAAGTCTCGAAAATACTGGACAAAAGAAAATGTTCTTTGGGGGCCGTGAGATCCTCGCAAGAAAATACGAAATAAGACTGAGGGGCATTGATGCACCGGAGATAGGCATGCAGTATGGAAAGGAGTCGCAGGATGCACTGGTGAAACTGATCGCTAGGAAGTGTGTCACGCTTCATGTTTATGGGCAGGACCAATTTAAGCGCTTCGTCTGTGATATCCATTGTGGTGGTGTGTTCATCCAGGAGCAAATGCTGGTGAATGGTCATGCCTGGCACTTCAAGAACTATGACAAACGGCCACAATTTGCAAAGTGGGAAAAAATGGCACGGGATGCACGTCAAGGGCTTTGGGCATATGATAACCTTGAGAAGCCATGGGAATGGAGAAAGAACAAGAGGAAGGCATCGCGACATCACAATTCAGATGTACGTTGATGGACTCTGGTCACTTGGATGATGATCTTATCTGAAATGACATAATTTGGAATTGGATCTATGGTTACTAGACAGTTAGCCCCAGTTGAGTATGTATAAAAGTATGATGTACTTTGTATATAGTAAGATTATTAATCTCGATCTGTATTATTTATAAACTAATATTTGAGTGAAGAATGTGTAGATGAATTATGATATGATACCGCTTTTCAAT]

[+] EMBL AK065967             [GTATTAGGATAGTCACAAAATTTATCTACATATATATGAAGCAAGTAAAGAAATATTATTCAAATGCTAGTTTCTCTATTTCTTAGCAACTGAAGTACTCAATCTATCCCAGAATAGTTTTTTACATGGTCTCTAACATAGAACTTTTTCCTTTTAATTTATTTTCCATAAGATATTATGAATGCTCTTTTAAATACGAATCTAATAATATCACATGCATGGCACAAAACATTGTTAGTTATTTTACTTATTAGTCAAGGGAAAATGTTGATTTTCCTAAATTATATTCTGAAAAAATGTCTCAATTGTTGGTGATATAGTACATGCAGATACAACAAAATTTCATAAGGACGTTAGATTGTTCGCATTTCCTGGGACATAAAAAAATCGTATGGATCTTATTTCAAAAAAAATTGTATGGAGAGGCTATACGCTATAATATTGTGCACATTTAACAAAAAGATTGTTGGTAGATAAAAAATCTATTTTCCCTAGAAGTGTAAGAGAATGTCTAGGTTTACCATTAGGGCAGTATTGTTAGTTAAATTAAAATCATTCTTTTTGTATCAACTCAAAATTATAACATTGGATAATACTATCAACTCAGAGAATAATCTGTTAATTGTTGATGATTTTCTCCAAATCTGGACTGCTAAAGAAATTATAAAACCAGTTACCATTGTTTTATTTTTGTCTGGTAACTGTTTTACTTTTCAGATTAACACTACAACAAGGCAATGTGGACATATGTTTAATATATTCAGTCTCCTAAACTCAGGAAGAAATTAATATTTTTTTATATTGTCTGTTATTAGAAATGAGCATCATTTTGGAACGTTCAGGTAAAATGTTATCCAGGATTGTTTTACAAATTGTCCTCAAGGAAAAGTTTGGACTATTTTGGTTTGAAGCCCTACAAAAAATTTTGTAATGCCAAAATTTAGGCATGTTTTGGCACTACCAATTTTTTTAGTTAAAATTGTCTAGTTAATGTTCCATTTGCTACCAATATGATGAGAATAAATTTCTAGAATGTGACCGAATAGAGCATGGCCAACAACAATTATTTCACTTCATTCCAAGCTATCCCTATTACTATTCAAGTTGCCAAAAGATTGGTAGAGCATATATTGGCATCAATCCAAAACGGTCCTTTGTAAACATTATTATGTGTATCGTCAATGCAAATGAGCAAATCTGCAGAAATTCTTAGAACATCAGGTGTTCATACTTTGTAATATTAAATGATAGTTGTGAACTAAGGCTGTGTTTAGTTCACATCAAAATTAGAAGTTTGGTTGAAATTGAAACGATGTGACGGAAAAGTTGGAAGTTTGTGTGTGTAGGAAAGTTTTGATGTGATGGAAAAGTTGGAAGTTTGAAGAATTATTTTGAAACTAAACATGACGCAAATAAATTGTAGCAAAATCCTTAATCATCCAGGATATTCTTTGGATTCTATTTAATGTAAGTTGGCATAATAGTTCAACAAATCGATTCTATCACCATGGAAAAAAATGTGTGTTTGGTTCACAGGGCATTCTTGCATTTTATGGCTTTCCAATTCCTACAATCTCCAAAGAGGCATCAGAAAATCATCCATCATCAATACCAAAGGGTGTGCTGTTCGTGCTAAAAACATTGCCGGTCAGATTTCACATGATATATCACCAGTATTGAGTAAAATAATGATTCTCACAAATCTAAACATTTATATCAGGTTAATGCAAAGTGCATAGTAGATGGTGATGGCTTTACTGCTTATGTCGACACACTGGATCCTATAGAACTGCGTCAGGATTGCAATGCAAGCTGTCAATCCCGTAACTCTGAGAAGCAAAAATTGTGGGACAAAACAGCAGCTGATCTACAAATAAGTCTCGAAAATACTGGACAAAAGAAAATGTTCTTTGGGGGCCGTGAGATCCTCGCAAGAAAATACGAAATAAGACTGAGGGGCATTGATGCACCGGAGATAGGCATGCAGTATGGAAAGGAGTCGCAGGATGCACTGGTGAAACTGATCGCTAGGAAGTGTGTCACGCTTCATGTTTATGGGCAGGACCAATTTAAGCGCTTCGTCTGTGATATCCATTGTGGTGGTGTGTTCATCCAGGAGCAAATGCTGGTGAATGGTCATGCCTGGCACTTCAAGAACTATGACAAACGGCCACAATTTGCAAAGTGGGAAAAAATGGCACGGGATGCACGTCAAGGGCTTTGGGCATATGATAACCTTGAGAAGCCATGGGAATGGAGAAAGAACAAGAGGAAGGCATCGCGACATCACAATTCAGATGTACGTTGATGGACTCTGGTCACTTGGATGATGATCTTATCTGAAATGACATAATTTGGAATTGGATCTATGGTTACTAGACAGTTAGCCCCAGTTGAGTATGTATAAAAGTATGATGTACTTTGTATATAGTAAGATTATTAATCTCGATCTGTATTATTTATAAACTAATATTTGAGTGAAGAATGTGTAGATGAATTATGATATGATACCGCTTTTCAAT]




>consensus_892#0
GTATTAGGATAGTCACAAAATTTATCTACATATATATGAAGCAAGTAAAGAAATATTATT
CAAATGCTAGTTTCTCTATTTCTTAGCAACTGAAGTACTCAATCTATCCCAGAATAGTTT
TTTACATGGTCTCTAACATAGAACTTTTTCCTTTTAATTTATTTTCCATAAGATATTATG
AATGCTCTTTTAAATACGAATCTAATAATATCACATGCATGGCACAAAACATTGTTAGTT
ATTTTACTTATTAGTCAAGGGAAAATGTTGATTTTCCTAAATTATATTCTGAAAAAATGT
CTCAATTGTTGGTGATATAGTACATGCAGATACAACAAAATTTCATAAGGACGTTAGATT
GTTCGCATTTCCTGGGACATAAAAAAATCGTATGGATCTTATTTCAAAAAAAATTGTATG
GAGAGGCTATACGCTATAATATTGTGCACATTTAACAAAAAGATTGTTGGTAGATAAAAA
ATCTATTTTCCCTAGAAGTGTAAGAGAATGTCTAGGTTTACCATTAGGGCAGTATTGTTA
GTTAAATTAAAATCATTCTTTTTGTATCAACTCAAAATTATAACATTGGATAATACTATC
AACTCAGAGAATAATCTGTTAATTGTTGATGATTTTCTCCAAATCTGGACTGCTAAAGAA
ATTATAAAACCAGTTACCATTGTTTTATTTTTGTCTGGTAACTGTTTTACTTTTCAGATT
AACACTACAACAAGGCAATGTGGACATATGTTTAATATATTCAGTCTCCTAAACTCAGGA
AGAAATTAATATTTTTTTATATTGTCTGTTATTAGAAATGAGCATCATTTTGGAACGTTC
AGGTAAAATGTTATCCAGGATTGTTTTACAAATTGTCCTCAAGGAAAAGTTTGGACTATT
TTGGTTTGAAGCCCTACAAAAAATTTTGTAATGCCAAAATTTAGGCATGTTTTGGCACTA
CCAATTTTTTTAGTTAAAATTGTCTAGTTAATGTTCCATTTGCTACCAATATGATGAGAA
TAAATTTCTAGAATGTGACCGAATAGAGCATGGCCAACAACAATTATTTCACTTCATTCC
AAGCTATCCCTATTACTATTCAAGTTGCCAAAAGATTGGTAGAGCATATATTGGCATCAA
TCCAAAACGGTCCTTTGTAAACATTATTATGTGTATCGTCAATGCAAATGAGCAAATCTG
CAGAAATTCTTAGAACATCAGGTGTTCATACTTTGTAATATTAAATGATAGTTGTGAACT
AAGGCTGTGTTTAGTTCACATCAAAATTAGAAGTTTGGTTGAAATTGAAACGATGTGACG
GAAAAGTTGGAAGTTTGTGTGTGTAGGAAAGTTTTGATGTGATGGAAAAGTTGGAAGTTT
GAAGAATTATTTTGAAACTAAACATGACGCAAATAAATTGTAGCAAAATCCTTAATCATC
CAGGATATTCTTTGGATTCTATTTAATGTAAGTTGGCATAATAGTTCAACAAATCGATTC
TATCACCATGGAAAAAAATGTGTGTTTGGTTCACAGGGCATTCTTGCATTTTATGGCTTT
CCAATTCCTACAATCTCCAAAGAGGCATCAGAAAATCATCCATCATCAATACCAAAGGGT
GTGCTGTTCGTGCTAAAAACATTGCCGGTCAGATTTCACATGATATATCACCAGTATTGA
GTAAAATAATGATTCTCACAAATCTAAACATTTATATCAGGTTAATGCAAAGTGCATAGT
AGATGGTGATGGCTTTACTGCTTATGTCGACACACTGGATCCTATAGAACTGCGTCAGGA
TTGCAATGCAAGCTGTCAATCCCGTAACTCTGAGAAGCAAAAATTGTGGGACAAAACAGC
AGCTGATCTACAAATAAGTCTCGAAAATACTGGACAAAAGAAAATGTTCTTTGGGGGCCG
TGAGATCCTCGCAAGAAAATACGAAATAAGACTGAGGGGCATTGATGCACCGGAGATAGG
CATGCAGTATGGAAAGGAGTCGCAGGATGCACTGGTGAAACTGATCGCTAGGAAGTGTGT
CACGCTTCATGTTTATGGGCAGGACCAATTTAAGCGCTTCGTCTGTGATATCCATTGTGG
TGGTGTGTTCATCCAGGAGCAAATGCTGGTGAATGGTCATGCCTGGCACTTCAAGAACTA
TGACAAACGGCCACAATTTGCAAAGTGGGAAAAAATGGCACGGGATGCACGTCAAGGGCT
TTGGGCATATGATAACCTTGAGAAGCCATGGGAATGGAGAAAGAACAAGAGGAAGGCATC
GCGACATCACAATTCAGATGTACGTTGATGGACTCTGGTCACTTGGATGATGATCTTATC
TGAAATGACATAATTTGGAATTGGATCTATGGTTACTAGACAGTTAGCCCCAGTTGAGTA
TGTATAAAAGTATGATGTACTTTGTATATAGTAAGATTATTAATCTCGATCTGTATTATT
TATAAACTAATATTTGAGTGAAGAATGTGTAGATGAATTATGATATGATACCGCTTTTCA
AT

consensusID : consensus_892#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1785
fasta sequence 
                              [ATCCTTTTTGGGTCCTTAGCTCAGAAGCAAGGATAGCTTTCCATGATTCCATCACTCATTAATAGCTAGGTACAAGGAGAAGATGGCAAACTAGAGGGATCAGGAGTAGCACCAGATCACATAGAAGGTGAGGTTCCATGGGGAACATCCTCAAGTGCTTCATCAGTTGCTTCGACGGAGAAGACGAAGATGGTGGTAGTGGCCATGGTCGCTTCCCCAACAGCTATCCTCCGGTCTCAAGTCTCCATTACCAGCCTCTGCATTTGGATGACCTTCAAGTGCCATTATCGCCTCCACCACCATCAACTAGGCAGCAGCAGCCGCCACCGCGACCGGCGCTCTCAAGACTCCATTACCAGCCTCTACGTTTGGCTGACCTTCAAGTGCCATTATCACCTCCACCACCATCAACTAGGCAGCAGCAGCTGCCACCGCGACCGGCACGTCCTCTTGGTTACCATCATGGAGTCCTCTGGCCGACGATAGAGATCACCCCATGCGATGACTTCCTCAACTTAGAATTCACAACTAAGGTTTGTGAAGGGCCCCAGCATCACAGTACACCATCCAGGAAGACGGACCTTAATAGGTGTATCCATGAAAAAGACGATGGCAACAGTAAACCCTCCTACTACTGGCTGACCAAGAACAAAGACAATCATGTAGTAACCCCTCAGACCAAACGGTCACCTCGGCCCCCTAGTGGGGTAGCTGCCCTGGAGCGTGACCTCGTCGACTTTACTCGGACCTTTGAGGTTCCTGAAGGGCTTGCACAGCATGTTACATCACCTATGCAGGCACAGGTTACATGGTATAGGAAATTGTTGGCCGCATACAAGGATATAAAATATCCACCCAAAGAATCAGCAGATGCTGCTGTGCTTGTTGCTGCAACCTTGAGAGGGATCGAACGAACTAATTTGGAGGGCATTCTTGCATTTTATGGCTTTCCAATTCCTACAATCTCCAAAGAGGCATCAGAAAATCATCCATCATCAATACCAAAGGGTGTGCTGTTCGTGCTAAAAACATTGCCGGTTAATGCAAAGTGCATAGTAGATGGTGATGGCTTTACTGCTTATGTCGACACACTGGATCCTATAGAACTGCGTCAGGATTGCAATGCAAGCTGTCAATCCCGTAACTCTAAGAAGCAAAAATTGTGGGACAAAACAGCAGCTGATCTACAAATAAGTCTCGAAAATACTGGACAAAAGAAAATGTTCTTTGGGGGCCGTGAGATCCTCGCAAGAAAATACGAAATAAGACTGAGGGGCATTGATGCACCGGAGATAGGCATGCAGTATGGAAAGGAGTCGCAGGATGCACTGGTGAAACTGATCGCTAGGAAGTGTGTCACGCTTCATGTTTATGGGCAGGACCAATTTAAGCGCTTCGTCTGTGATATCCATTGTGGTGGTGTGTTCATCCAGGAGCAAATGCTGGTGAATGGTCATGCCTGGCACTTCAAGAACTATGACAAACGGCCACAATTTGCAAAGTGGGAAAAAATGGCACGGGATGCACGTCAAGGGCTTTGGGCATATGATAACCTTGAGAAGCCATGGGAATGGAGAAAGAACAAGAGGAAGGCATCGCGACATCACAATTCAGATGTACGTTGATGGACTCTGGTCACTTGGATGATGATCTTATCTGAAATGACATAATTTGGAATTGGATCTATGGTTACTAGACAGTTAGCCCCAGTTGAGTATGTATAAAAGTATGATGTACTTTGTATATAGTAAGATTATTAATCTCGATCTGTATTATTTATAAACT]

[+] EMBL AK068445             [ATCCTTTTTGGGTCCTTAGCTCAGAAGCAAGGATAGCTTTCCATGATTCCATCACTCATTAATAGCTAGGTACAAGGAGAAGATGGCAAACTAGAGGGATCAGGAGTAGCACCAGATCACATAGAAGGTGAGGTTCCATGGGGAACATCCTCAAGTGCTTCATCAGTTGCTTCGACGGAGAAGACGAAGATGGTGGTAGTGGCCATGGTCGCTTCCCCAACAGCTATCCTCCGGTCTCAAGTCTCCATTACCAGCCTCTGCATTTGGATGACCTTCAAGTGCCATTATCGCCTCCACCACCATCAACTAGGCAGCAGCAGCCGCCACCGCGACCGGCGCTCTCAAGACTCCATTACCAGCCTCTACGTTTGGCTGACCTTCAAGTGCCATTATCACCTCCACCACCATCAACTAGGCAGCAGCAGCTGCCACCGCGACCGGCACGTCCTCTTGGTTACCATCATGGAGTCCTCTGGCCGACGATAGAGATCACCCCATGCGATGACTTCCTCAACTTAGAATTCACAACTAAGGTTTGTGAAGGGCCCCAGCATCACAGTACACCATCCAGGAAGACGGACCTTAATAGGTGTATCCATGAAAAAGACGATGGCAACAGTAAACCCTCCTACTACTGGCTGACCAAGAACAAAGACAATCATGTAGTAACCCCTCAGACCAAACGGTCACCTCGGCCCCCTAGTGGGGTAGCTGCCCTGGAGCGTGACCTCGTCGACTTTACTCGGACCTTTGAGGTTCCTGAAGGGCTTGCACAGCATGTTACATCACCTATGCAGGCACAGGTTACATGGTATAGGAAATTGTTGGCCGCATACAAGGATATAAAATATCCACCCAAAGAATCAGCAGATGCTGCTGTGCTTGTTGCTGCAACCTTGAGAGGGATCGAACGAACTAATTTGGAGGGCATTCTTGCATTTTATGGCTTTCCAATTCCTACAATCTCCAAAGAGGCATCAGAAAATCATCCATCATCAATACCAAAGGGTGTGCTGTTCGTGCTAAAAACATTGCCGGTTAATGCAAAGTGCATAGTAGATGGTGATGGCTTTACTGCTTATGTCGACACACTGGATCCTATAGAACTGCGTCAGGATTGCAATGCAAGCTGTCAATCCCGTAACTCTAAGAAGCAAAAATTGTGGGACAAAACAGCAGCTGATCTACAAATAAGTCTCGAAAATACTGGACAAAAGAAAATGTTCTTTGGGGGCCGTGAGATCCTCGCAAGAAAATACGAAATAAGACTGAGGGGCATTGATGCACCGGAGATAGGCATGCAGTATGGAAAGGAGTCGCAGGATGCACTGGTGAAACTGATCGCTAGGAAGTGTGTCACGCTTCATGTTTATGGGCAGGACCAATTTAAGCGCTTCGTCTGTGATATCCATTGTGGTGGTGTGTTCATCCAGGAGCAAATGCTGGTGAATGGTCATGCCTGGCACTTCAAGAACTATGACAAACGGCCACAATTTGCAAAGTGGGAAAAAATGGCACGGGATGCACGTCAAGGGCTTTGGGCATATGATAACCTTGAGAAGCCATGGGAATGGAGAAAGAACAAGAGGAAGGCATCGCGACATCACAATTCAGATGTACGTTGATGGACTCTGGTCACTTGGATGATGATCTTATCTGAAATGACATAATTTGGAATTGGATCTATGGTTACTAGACAGTTAGCCCCAGTTGAGTATGTATAAAAGTATGATGTACTTTGTATATAGTAAGATTATTAATCTCGATCTGTATTATTTATAAACT]




>consensus_892#1
ATCCTTTTTGGGTCCTTAGCTCAGAAGCAAGGATAGCTTTCCATGATTCCATCACTCATT
AATAGCTAGGTACAAGGAGAAGATGGCAAACTAGAGGGATCAGGAGTAGCACCAGATCAC
ATAGAAGGTGAGGTTCCATGGGGAACATCCTCAAGTGCTTCATCAGTTGCTTCGACGGAG
AAGACGAAGATGGTGGTAGTGGCCATGGTCGCTTCCCCAACAGCTATCCTCCGGTCTCAA
GTCTCCATTACCAGCCTCTGCATTTGGATGACCTTCAAGTGCCATTATCGCCTCCACCAC
CATCAACTAGGCAGCAGCAGCCGCCACCGCGACCGGCGCTCTCAAGACTCCATTACCAGC
CTCTACGTTTGGCTGACCTTCAAGTGCCATTATCACCTCCACCACCATCAACTAGGCAGC
AGCAGCTGCCACCGCGACCGGCACGTCCTCTTGGTTACCATCATGGAGTCCTCTGGCCGA
CGATAGAGATCACCCCATGCGATGACTTCCTCAACTTAGAATTCACAACTAAGGTTTGTG
AAGGGCCCCAGCATCACAGTACACCATCCAGGAAGACGGACCTTAATAGGTGTATCCATG
AAAAAGACGATGGCAACAGTAAACCCTCCTACTACTGGCTGACCAAGAACAAAGACAATC
ATGTAGTAACCCCTCAGACCAAACGGTCACCTCGGCCCCCTAGTGGGGTAGCTGCCCTGG
AGCGTGACCTCGTCGACTTTACTCGGACCTTTGAGGTTCCTGAAGGGCTTGCACAGCATG
TTACATCACCTATGCAGGCACAGGTTACATGGTATAGGAAATTGTTGGCCGCATACAAGG
ATATAAAATATCCACCCAAAGAATCAGCAGATGCTGCTGTGCTTGTTGCTGCAACCTTGA
GAGGGATCGAACGAACTAATTTGGAGGGCATTCTTGCATTTTATGGCTTTCCAATTCCTA
CAATCTCCAAAGAGGCATCAGAAAATCATCCATCATCAATACCAAAGGGTGTGCTGTTCG
TGCTAAAAACATTGCCGGTTAATGCAAAGTGCATAGTAGATGGTGATGGCTTTACTGCTT
ATGTCGACACACTGGATCCTATAGAACTGCGTCAGGATTGCAATGCAAGCTGTCAATCCC
GTAACTCTAAGAAGCAAAAATTGTGGGACAAAACAGCAGCTGATCTACAAATAAGTCTCG
AAAATACTGGACAAAAGAAAATGTTCTTTGGGGGCCGTGAGATCCTCGCAAGAAAATACG
AAATAAGACTGAGGGGCATTGATGCACCGGAGATAGGCATGCAGTATGGAAAGGAGTCGC
AGGATGCACTGGTGAAACTGATCGCTAGGAAGTGTGTCACGCTTCATGTTTATGGGCAGG
ACCAATTTAAGCGCTTCGTCTGTGATATCCATTGTGGTGGTGTGTTCATCCAGGAGCAAA
TGCTGGTGAATGGTCATGCCTGGCACTTCAAGAACTATGACAAACGGCCACAATTTGCAA
AGTGGGAAAAAATGGCACGGGATGCACGTCAAGGGCTTTGGGCATATGATAACCTTGAGA
AGCCATGGGAATGGAGAAAGAACAAGAGGAAGGCATCGCGACATCACAATTCAGATGTAC
GTTGATGGACTCTGGTCACTTGGATGATGATCTTATCTGAAATGACATAATTTGGAATTG
GATCTATGGTTACTAGACAGTTAGCCCCAGTTGAGTATGTATAAAAGTATGATGTACTTT
GTATATAGTAAGATTATTAATCTCGATCTGTATTATTTATAAACT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_892#0      GTATTAGGATAGTCACAAAATTTATCTACATATATATGAAGCAAGTAAAGAAATATTATT 60
consensus_892#1      ------------------------------------------------------------
                                                                                 

consensus_892#0      CAAATGCTAGTTTCTCTATTTCTTAGCAACTGAAGTACTCAATCTATCCCAGAATAGTTT 120
consensus_892#1      ------------------------------------------------------------
                                                                                 

consensus_892#0      TTTACATGGTCTCTAACATAGAACTTTTTCCTTTTAATTTATTTTCCATAAGATATTATG 180
consensus_892#1      ------------------------------------------------------------
                                                                                 

consensus_892#0      AATGCTCTTTTAAATACGAATCTAATAATATCACATGCATGGCACAAAACATTGTTAGTT 240
consensus_892#1      ------------------------------------------------------------
                                                                                 

consensus_892#0      ATTTTACTTATTAGTCAAGGGAAAATGTTGATTTTCCTAAATTATATTCTGAAAAAATGT 300
consensus_892#1      ------------------------------------------------------------
                                                                                 

consensus_892#0      CTCAATTGTTGGTGATATAGTACATGCAGATACAACAAAATTTCATAAGGACGTTAGATT 360
consensus_892#1      ------------------------------------------------------------
                                                                                 

consensus_892#0      GTTCGCATTTCCTGGGACATAAAAAAATCGTATGGATCTTATTTCAAAAAAAATTGTATG 420
consensus_892#1      ------------------------------------------------------------
                                                                                 

consensus_892#0      GAGAGGCTATACGCTATAATATTGTGCACATTTAACAAAAAGATTGTTGGTAGATAAAAA 480
consensus_892#1      ------------------------------------------------------------
                                                                                 

consensus_892#0      ATCTATTTTCCCTAGAAGTGTAAGAGAATGTCTAGGTTTACCATTAGGGCAGTATTGTTA 540
consensus_892#1      ------------------------------------------------------------
                                                                                 

consensus_892#0      GTTAAATTAAAATCATTCTTTTTGTATCAACTCAAAATTA----TAACATTGGATAATAC 596
consensus_892#1      -----------ATCCTTTTTGGGTCCTTAGCTCAGAAGCAAGGATAGCTTTCCATGATTC 49
                                *** ** **      * * **** **  *    ** * **  ** ** *

consensus_892#0      TATCAACTCAGAGAATAATCTGTTAATTGTTGATGATTTTCTCCAAATCTGGACTGCTAA 656
consensus_892#1      CATCA-CTCATT-AATAGCTAGGTACAAGGAGAAGATGG----CAAACTAGAGGGATCAG 103
                      **** ****   ****    * **   *  ** ***      ****   *       * 

consensus_892#0      AGAAATTATAAAACCAGTTACCATTGTTTTATTTTTGTCTGGTAACTGTTTTACTTTTCA 716
consensus_892#1      GAGTAGCACCAGATCACATAGAA--GGTGAGGTTCCATGGGGAACATCCTCAAGTGCTTC 161
                         *  *  * * **  **  *  * *    **   *  ** *  *  *  * *  *  

consensus_892#0      GATTAACACTACAACAAGGCAATGTGGACATATGTTTAATATATTCAGTCTCCTAAACTC 776
consensus_892#1      ATCAGTTGCTTCGACGGAG-AAGACGAAGATGGTGGTAGTGGCCATGGTCGCTT---CCC 217
                             ** * **   * **   * * **     ** *       *** * *   * *

consensus_892#0      AGGAAGAAATTAATATTTTTTTATATTGTCTGTTATTAGAAATGAGCATCATTTTGGAAC 836
consensus_892#1      CAACAGCTATC--CTCCGGTCTCAAGTCTCCATTACCAGCC-TCTGCAT--TTGGATGAC 272
                         **  **         * *  * * **  ***  **   *  ****  **     **

consensus_892#0      GTTCAGGTAAAATGTTATCCAGGATTGTTTTACAAATTGTCCTCAAGGAAA-AGTTTGGA 895
consensus_892#1      CTTCAAGTG---------CCATTATCGCCTCCACCACCATCAACTAGGCAGCAGCAGCCG 323
                      **** **          ***  ** *  *     *   **  * *** *  **      

consensus_892#0      CTATTTTGGTTTGAAGCCCTACAAAAAATTTTGTAATGCCAAAATTTAGGC-ATGTTTTG 954
consensus_892#1      CCACCGCGACCGGCGCTCTCAAGACTCCATTACCAGCCTCTACGTTTGGCTGACCTTCAA 383
                     * *    *    *    *  *  *     **   *    * *  *** *   *  **   

consensus_892#0      GCACTACCAATTTTTTTAGTTAAAATTGTCTAGTTAATGTTCCATTTGCTACCAATATGA 1014
consensus_892#1      GTGCCATTA-TCACCTCCACCACCATCAACTAGGCAG-----CAGCAGCTGCCACCGCGA 437
                     *  * *  * *    *     *  **   ****  *      **   *** ***    **

consensus_892#0      TGAGAATAAATTTCTAGAATGTGACCGAATAGAGCA-TGGCCAACAACAATTATTTCACT 1073
consensus_892#1      CCGGCACGT-CCTCTTGGTTACCATCATGGAGTCCTCTGGCCGACGATAG--AGATCACC 494
                        * *      *** *  *   * *    **  *  ***** ** * *   *  **** 

consensus_892#0      TCATTCCAAGCTATCCCTATTACTATTCAAGTTGCCAA--AAGATTGGTAGAGCATATAT 1131
consensus_892#1      CCATGCGATGACTTCCTCAAC----TTAGAATTCACAACTAAGGTTTGTGAAGGGCCC-- 548
                      *** * * *   ***  *      **  * **  ***  *** ** **  **       

consensus_892#0      TGGCATCAATCCAAAACGGTCCTTTGTAAACATTATTATGTGTATCGTCAATGCAAATGA 1191
consensus_892#1      CAGCATCACAGTACACCATCCAGGAAGACGGACCTTAATAGGTGT-ATCCATGAAAAAGA 607
                       ******    * * *   *      *   *   * **  ** *  ** *** *** **

consensus_892#0      GCAAATCTGCAG-AAATTCTTAGAACATCAGGTGTTCATACTTTGTAATATTAAATGATA 1250
consensus_892#1      CGATGGCAACAGTAAACCCTCCTACTACTGGCTGACCA---------AGAACAAA-GACA 657
                       *   *  *** ***  **   *  *   * **  **         * *  *** ** *

consensus_892#0      GTTGTGAACTAAGGCTGTGTTTAGTTCACATCAAAATTAGAAGTTTGGTTGAAATTGAAA 1310
consensus_892#1      ATCATGTAGTAACCCC---------TCAGACCAAACGGTCACCTCGGCCCCCTAGTGGGG 708
                      *  ** * ***  *          *** * ****     *  *  *      * **   

consensus_892#0      CGATGTGACGGAAAAGTTGGAAGTTTGTGTGTGTAGGAAAGTTTTGATGTGATGGAAAAG 1370
consensus_892#1      TAGCTGCCCTGGAGCGTGACCTCGTCGACTTTACTCGGACCTTTGAGGTTCCTGAAGGGC 768
                             * * *  **       * *  * *    * *  ***     *  ** *    

consensus_892#0      TTGGA-AGTTTGAAGAATTATTTTGAAACTAAACATGACGCAAATAAATTGTAGCAAAAT 1429
consensus_892#1      TTGCACAGCATGTTACATCACCT---ATGCAGGCACAGGTTACATGG--TATAG-GAAAT 822
                     *** * **  **    ** *  *   *   *  **      * **    * ***  ****

consensus_892#0      CCTTAATCATCCAGGATATTCTTTGGATTCTATTTAATGTAAGTTGGCATAATAGTTCAA 1489
consensus_892#1      TGTTGGCCGCATACAAGGATATAAAATATCCACCCAAAG--AATCAGCA-GATGCTGCTG 879
                       **   *    *  *   * *      ** *   ** *  * *  ***  **  * *  

consensus_892#0      CAAATCGATTCTATCACCATGGAAAAAAATGTGTGT-TTGGTTCACAGGGCATTCTTGCA 1548
consensus_892#1      TGC-TTGTTGCTGCAACCTTGAGAGGGATCGAACGAACTAATTTGGAGGGCATTCTTGCA 938
                         * * * **   *** **  *   *  *   *   *  **   **************

consensus_892#0      TTTTATGGCTTTCCAATTCCTACAATCTCCAAAGAGGCATCAGAAAATCATCCATCATCA 1608
consensus_892#1      TTTTATGGCTTTCCAATTCCTACAATCTCCAAAGAGGCATCAGAAAATCATCCATCATCA 998
                     ************************************************************

consensus_892#0      ATACCAAAGGGTGTGCTGTTCGTGCTAAAAACATTGCCGGTCAGATTTCACATGATATAT 1668
consensus_892#1      ATACCAAAGGGTGTGCTGTTCGTGCTAAAAACATTGCCGGT------------------- 1039
                     *****************************************                   

consensus_892#0      CACCAGTATTGAGTAAAATAATGATTCTCACAAATCTAAACATTTATATCAGGTTAATGC 1728
consensus_892#1      ------------------------------------------------------TAATGC 1045
                                                                           ******

consensus_892#0      AAAGTGCATAGTAGATGGTGATGGCTTTACTGCTTATGTCGACACACTGGATCCTATAGA 1788
consensus_892#1      AAAGTGCATAGTAGATGGTGATGGCTTTACTGCTTATGTCGACACACTGGATCCTATAGA 1105
                     ************************************************************

consensus_892#0      ACTGCGTCAGGATTGCAATGCAAGCTGTCAATCCCGTAACTCTGAGAAGCAAAAATTGTG 1848
consensus_892#1      ACTGCGTCAGGATTGCAATGCAAGCTGTCAATCCCGTAACTCTAAGAAGCAAAAATTGTG 1165
                     ******************************************* ****************

consensus_892#0      GGACAAAACAGCAGCTGATCTACAAATAAGTCTCGAAAATACTGGACAAAAGAAAATGTT 1908
consensus_892#1      GGACAAAACAGCAGCTGATCTACAAATAAGTCTCGAAAATACTGGACAAAAGAAAATGTT 1225
                     ************************************************************

consensus_892#0      CTTTGGGGGCCGTGAGATCCTCGCAAGAAAATACGAAATAAGACTGAGGGGCATTGATGC 1968
consensus_892#1      CTTTGGGGGCCGTGAGATCCTCGCAAGAAAATACGAAATAAGACTGAGGGGCATTGATGC 1285
                     ************************************************************

consensus_892#0      ACCGGAGATAGGCATGCAGTATGGAAAGGAGTCGCAGGATGCACTGGTGAAACTGATCGC 2028
consensus_892#1      ACCGGAGATAGGCATGCAGTATGGAAAGGAGTCGCAGGATGCACTGGTGAAACTGATCGC 1345
                     ************************************************************

consensus_892#0      TAGGAAGTGTGTCACGCTTCATGTTTATGGGCAGGACCAATTTAAGCGCTTCGTCTGTGA 2088
consensus_892#1      TAGGAAGTGTGTCACGCTTCATGTTTATGGGCAGGACCAATTTAAGCGCTTCGTCTGTGA 1405
                     ************************************************************

consensus_892#0      TATCCATTGTGGTGGTGTGTTCATCCAGGAGCAAATGCTGGTGAATGGTCATGCCTGGCA 2148
consensus_892#1      TATCCATTGTGGTGGTGTGTTCATCCAGGAGCAAATGCTGGTGAATGGTCATGCCTGGCA 1465
                     ************************************************************

consensus_892#0      CTTCAAGAACTATGACAAACGGCCACAATTTGCAAAGTGGGAAAAAATGGCACGGGATGC 2208
consensus_892#1      CTTCAAGAACTATGACAAACGGCCACAATTTGCAAAGTGGGAAAAAATGGCACGGGATGC 1525
                     ************************************************************

consensus_892#0      ACGTCAAGGGCTTTGGGCATATGATAACCTTGAGAAGCCATGGGAATGGAGAAAGAACAA 2268
consensus_892#1      ACGTCAAGGGCTTTGGGCATATGATAACCTTGAGAAGCCATGGGAATGGAGAAAGAACAA 1585
                     ************************************************************

consensus_892#0      GAGGAAGGCATCGCGACATCACAATTCAGATGTACGTTGATGGACTCTGGTCACTTGGAT 2328
consensus_892#1      GAGGAAGGCATCGCGACATCACAATTCAGATGTACGTTGATGGACTCTGGTCACTTGGAT 1645
                     ************************************************************

consensus_892#0      GATGATCTTATCTGAAATGACATAATTTGGAATTGGATCTATGGTTACTAGACAGTTAGC 2388
consensus_892#1      GATGATCTTATCTGAAATGACATAATTTGGAATTGGATCTATGGTTACTAGACAGTTAGC 1705
                     ************************************************************

consensus_892#0      CCCAGTTGAGTATGTATAAAAGTATGATGTACTTTGTATATAGTAAGATTATTAATCTCG 2448
consensus_892#1      CCCAGTTGAGTATGTATAAAAGTATGATGTACTTTGTATATAGTAAGATTATTAATCTCG 1765
                     ************************************************************

consensus_892#0      ATCTGTATTATTTATAAACTAATATTTGAGTGAAGAATGTGTAGATGAATTATGATATGA 2508
consensus_892#1      ATCTGTATTATTTATAAACT---------------------------------------- 1785
                     ********************                                        

consensus_892#0      TACCGCTTTTCAAT 2522
consensus_892#1      --------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)