cluster # 8924

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Oryza sativa
cluster # 8924 cluster # 8924 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8924#0 length = 1147 sequences # 6
consensusID : consensus_8924#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1147
fasta sequence
                              [CCACCGCCTCCCTTTGCTCTTTTC-ATTCTCTTTTTTTTTTTTTTTCTTCGCCTCCCCCCCAAACTCCTCGTGCGCCTCGCGACGAGGGGACGACGACGGCGACGACAGGGCCGCGAGGAGATCGAATCGCGATCGCCGTCATCCATGTCGACGTCGCGCAGGAGGACCCTCCTCAAGGTCATCGTCCTCGGCGACAGCGGGGTGGGGAAGACGTCGCTTATGAACCAATATGTTCACAAGAAGTTTAGCCAGCAGTACAAAGCTACAATTGGTGCGGATTTCGTCACCAAGGAGGTCCTCATTGAAGATAGGCTCGTGACTCTGCAGATCTGGGACACTGCGGGGCAGGAGAGGTTCCAGAGTCTTGGTGTTGCGTTTTACAGAGGAGCAGATTGTTGTGTGCTCGTCTATGACGTCAATTCTAACAGGTCATTTGACACGCTCAACACATGGCATGATGAGTTCCTCAACCAAGCTAGCCCATCAGATCCCAAAACTTTTCCATTCATCTTACTTGGGAACAAGATTGACGTAGATGGAGGGAAAAGCAGAGTGGTTTCTGAGAAAAAAGCAATGGAGTGGTGTTCATCCAAAGGCAATATTCCTTATTTTGAAACTTCTGCAAAAGAGGACCGCAATGTCGACAGTGCGTTCTTGTCTGTCGCTAAGCTTGCTTTAGAGCATGAGCGTGATCAGGACATCTACTTCCAGACGGTTGTTCCAGATCCTGTTCCAGAGGCTGAACAGAGAAGTGGATGTGCATGCTAGCAGCTAGTTATTGCCGTTGCAGGTTATGCTTACTGATTGTGATATTTTTTTGAAGTGATGTTGTGCATTCTTTGATGTACACTAAGGTTCCTATGCGGCCATTCTACTCCCTTTTGTAGTCATTGTACGATAGTTAGCCACTACTGTTTTGGCCCAAGAGTACTCATGCGGAGTCCTTTTCCTCCAATTGGGCAATAAGAATGTACAGAGGCTGATAATTTGGAATAATGCCCTATCTGCTGTTTAAAAAAAAACCTTAACTTATTATATCCGTGCAGTTATAACTTGTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACGTACCGTAT]

[+] EMBL CF330548             [CCACCGCCTCCCTTTGCTCTTTTC ATTCTCTTTTTTTTTTTTTTTCTTCGCCTCCCCCCCAAACTCCTCGTGCGCCTCGCGACGAGGGGACGACGACGGCGACGACAGGGCCGCGAGGAGATCGAATCGCGATTGTTTTCATCCATGTCGACGTCGCGCAGGAGGACCCTCCTCAAGGTCTTTTTCCTCGGCGACAGCGGGGTGGGGAAGACGTCGCTTATGAACCAATATGTTCACAAGAAGTTTAGCCAGCAGTACAAAGCTACAATTGGTGCGGATTTCGTCACCAAGGAGGTCCTCATTGAAGATAGGCTCGTGACTCTGCAGATCTGGGACACTGCGGGGCAGGAGAGGTTCCAGAGTCTTGGTGTTGCGTTTTACAGAGGAGCAGATTGTTGTGTGCTCGTCTATGACGTCAATTCTAACAGGTCATTTGACACGCTCAACACATGGCATGATGAGTTCCTCAACCAAGCTAGCCCATCAGATCCCAAAACTTTTCCATTCATCTTACTTGGGAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF330028             [        TCCCTTTGCTCTTTTCAATTCTCTTTTTTTTTTTTTTTCTTCGCCTCCCCCCCAAACTCCTCGTGCGCCTCGCGACGAGGGGACGACGACGGCGACGACAGGGCCGCGAGGAGATCGAATCGCGATCGCCGTCATCCATGTCGACGTCGCGCAGGAGGACCCTCCTCAAGGTCATCGTCCTCGGCGACAGCGGGGTGGGGAAGACGTCGCTTAT  ACCAATATGTTCACAAGAAGTTTAGCCAGCAGTACAAAGCTACAATTGGTGCGGATTTCGTCACCAAGGAGGTCCTCATTGAAGATAGGCTCGTGACTCTGCAGATCTGGGACACTGCGGGGCAGGAGAGGTTCCAGAGTCTTGGTGTTGCGTTTTACAGAGGAGCAGATTGTTGTGTGCTCGTCTATGACGTCAATTCTAACAGGTCATTTGACACGCTCAACACATGGCATGATGAGTTCCTCAACCAAGCTAGCCCATCAGATCCCAAAACTTTTCCATTCATCTTACTTGGGAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK111495             [                                  TTTTTTTTTTTTCTTCGCCTCCCCCCCAAACTCCTCGTGCGCCTCGCGACGAGGGGACGACGACGGCGACGACAGGGCCGCGAGGAGATCGAATCGCGATCGCCGTCATCCATGTCGACGTCGCGCAGGAGGACCCTCCTCAAGGTCATCGTCCTCGGCGACAGCGGGGTGGGGAAGACGTCGCTTATGAACCAATATGTTCACAAGAAGTTTAGCCAGCAGTACAAAGCTACAATTGGTGCGGATTTCGTCACCAAGGAGGTCCTCATTGAAGATAGGCTCGTGACTCTGCAGATCTGGGACACTGCGGGGCAGGAGAGGTTCCAGAGTCTTGGTGTTGCGTTTTACAGAGGAGCAGATTGTTGTGTGCTCGTCTATGACGTCAATTCTAACAGGTCATTTGACACGCTCAACACATGGCATGATGAGTTCCTCAACCAAGCTAGCCCATCAGATCCCAAAACTTTTCCATTCATCTTACTTGGGAACAAGATTGACGTAGATGGAGGGAAAAGCAGAGTGGTTTCTGAGAAAAAAGCAATGGAGTGGTGTTCATCCAAAGGCAATATTCCTTATTTTGAAACTTCTGCAAAAGAGGACCGCAATGTCGACAGTGCGTTCTTGTCTGTCGCTAAGCTTGCTTTAGAGCATGAGCGTGATCAGGACATCTACTTCCAGACGGTTGTTCCAGATCCTGTTCCAGAGGCTGAACAGAGAAGTGGATGTGCATGCTAGCAGCTAGTTATTGCCGTTGCAGGTTATGCTTACTGATTGTGATATTTTTTTGAAGTGATGTTGTGCATTCTTTGATGTACACTAAGGTTCCTATGCGGCCATTCTACTCCCTTTTGTAGTCATTGTACGATAGTTAGCCACTACTGTTTTGGCCCAAGAGTACTCATGCGGAGTCCTTTTCCTCCAATTGGGCAATAAGAATGTACAGAGGCTGATAATTTGGAATAATGCCCTATCTGC                                                                                                                                           ]
[+] EMBL CA999181             [                                                                                                                                      CGCCGTCATCCATGTCGACGTCGCGCAGGAGGACCCTCCTCAAGGTCATCGTCCTCGGCGACAGCGGGGTAGGGAAGACGTCGCTTATGAACCAATATGTTCACAAGAAGTTTAGCCAGCAGTACAAAGCAACAATTGGTGCGGATTTCGTCACTAAGGAGGTCCTCATTGAAGATAGGCTCGTGACTCTGCAGATCTGGGACACTGCGGGGCAGGAGAGGTTCCAGAGTCTTGGTGTTGCGTTTTACAGAGGAGCAGATTGTTGTGTGCTTGTCTATGACGTCAATTCTAACAGGTCATTTGACACTCTCAACACATGGCATGATGAGTTCCTCAACCAAGCTAGCCCATCAGATCCCAAAACTTTTCCATTCATCTTACTTGGGAACAAGATTGACGTAGATGGAGGGAAAAGCAGAGTGGTTTCTGAGAAAAAAGCAATGGAGTGGTGTTCATCCAAAGGCAATATTCCTTATTTTGAAACTTCTGCAAAAGAGGACCGCAATGTCGACAGTGCGTTCTTGTCTGTTGCTAAGCTTGCTTTAGAGCATGAGCGTGATCAGGACATCTACTTCCAGACGGTTGTTCCAGATCCTGTTCCAGAGGCTGAACAGAGAAGTGGATGTGCATG                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CF330547             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TAAGCTTGCTTTAGAGCATGAGCGTGATCAGGACATCTACTTCCAGACGGTTGTTCCAGATCCTGTTCCAGAGGCTGAACAGAGAAGTGGATGTGCATGCTAGCAGCTAGTTATTGCCGTTGCAGGTTATGCTTACTGATTGTGATATTTTTTTGAAGTGATGTTGTGCATTCTTTGATGTACACTAAGGTTCCTATGCGGCCATTCTACTCCCTTTTGTAGTCATTGTACGATAGTTAGCCACTACTGTTTTGGCCCAAGAGTACTCATGCGGAGTCCTTTTCCTCCAATTGGGCAATAAGAATGTACAGAGGCTGATAATTTGGAATAATGCCCTATCTGCTGTTTAAAAAAAAA                                                                                                                             ]
[+] EMBL CF331684             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGCAATAAGAATGTACAGAGGCTGATAATTTGGAATAATGCCCTATCTGCTGTTTATCTCATGGCCTTAACTTATTATATCCGTGCAGTTATAACTTGTCCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACGTACCGTAT]




>consensus_8924#0
CCACCGCCTCCCTTTGCTCTTTTCATTCTCTTTTTTTTTTTTTTTCTTCGCCTCCCCCCC
AAACTCCTCGTGCGCCTCGCGACGAGGGGACGACGACGGCGACGACAGGGCCGCGAGGAG
ATCGAATCGCGATCGCCGTCATCCATGTCGACGTCGCGCAGGAGGACCCTCCTCAAGGTC
ATCGTCCTCGGCGACAGCGGGGTGGGGAAGACGTCGCTTATGAACCAATATGTTCACAAG
AAGTTTAGCCAGCAGTACAAAGCTACAATTGGTGCGGATTTCGTCACCAAGGAGGTCCTC
ATTGAAGATAGGCTCGTGACTCTGCAGATCTGGGACACTGCGGGGCAGGAGAGGTTCCAG
AGTCTTGGTGTTGCGTTTTACAGAGGAGCAGATTGTTGTGTGCTCGTCTATGACGTCAAT
TCTAACAGGTCATTTGACACGCTCAACACATGGCATGATGAGTTCCTCAACCAAGCTAGC
CCATCAGATCCCAAAACTTTTCCATTCATCTTACTTGGGAACAAGATTGACGTAGATGGA
GGGAAAAGCAGAGTGGTTTCTGAGAAAAAAGCAATGGAGTGGTGTTCATCCAAAGGCAAT
ATTCCTTATTTTGAAACTTCTGCAAAAGAGGACCGCAATGTCGACAGTGCGTTCTTGTCT
GTCGCTAAGCTTGCTTTAGAGCATGAGCGTGATCAGGACATCTACTTCCAGACGGTTGTT
CCAGATCCTGTTCCAGAGGCTGAACAGAGAAGTGGATGTGCATGCTAGCAGCTAGTTATT
GCCGTTGCAGGTTATGCTTACTGATTGTGATATTTTTTTGAAGTGATGTTGTGCATTCTT
TGATGTACACTAAGGTTCCTATGCGGCCATTCTACTCCCTTTTGTAGTCATTGTACGATA
GTTAGCCACTACTGTTTTGGCCCAAGAGTACTCATGCGGAGTCCTTTTCCTCCAATTGGG
CAATAAGAATGTACAGAGGCTGATAATTTGGAATAATGCCCTATCTGCTGTTTAAAAAAA
AACCTTAACTTATTATATCCGTGCAGTTATAACTTGTCCTCAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCTTGCCGTTACGT
ACCGTAT
clustalw multiple alignements is not computed in this case