cluster # 8939

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Oryza sativa
cluster # 8939 cluster # 8939 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8939#0 length = 474 sequences # 6

consensusID : consensus_8939#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 474
fasta sequence

                              [AATACCTTCGGCTCACCGATGCTGCCCGCGGCGGCGGCCGTGTGGATGTGGCCCGCAGCGGCGACGGCCGCGCCGTTGCTGCCCGCGACGGCGACGGCTGCGCCGATGCAGGCCGCGACGGTGTCGGTGGT-GTGGATGTGTCTTGCAA-TGGCGGCGTG-GATGCGGCTC-GGATGATCTCC-TCTTCTTCAACCTTCTCTATCGAGTTACCAAGACAGCAAGTTCTTCACCACCATCTTCGGATTGAGTCTTTGGTTGGCTGGATTTGGAGAAATTCTTCCTCTATGTCTCTTGGCAGTAATAACCATGCAGGGTTTATCGTTTGGGTTGAGCCCAGATTGGATTTGCAACCTTGGTTTGCAGGTTTACAGTCCGAGCTCCTCAGATTCAACAATGAATTCAATTCCCCTAAATGCTGTCATTTAATCAAGTGTGATGTGTATATTTTAAAAAAAAAAAACAACAACAAAAAAAAAA]

[+] EMBL BU673678             [AATACCTTCGGCTCACCGATGCTGCCCGCGGCGGCGGCCGTGTGGATGTGGCCCGCAGCGGCGACGG CGCGCCGTTGCTGCCCGCGACGGCGACGGCTGCGCCGATGCAGGCCGCGACGGTGTCGGTGGTAGTGGATGTGTCTTGCAACTGG GGCGTGNGATGCGGCTCAGGATGATCTCCATCTTCTTC                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB964844             [                     CTGCCCGCGGCGGCGGCCGTGTGGATGTGGCCCGCAGCGGCGACGGCCGCGCCGTTGCTGCCCGCGACGGCGACGGCTGCGCCGATGCAGGCCGCGACGGTGTCGGTGGT GTGGATGTGTCTTGCAA TGGCGGCGTG GATGCGGCTC GGATGATCTCC TCTTCTTCAACCTTCTCTATCGAGTTACCAAGACAGCAAGTTCTTCACCACCATCTTCGGATTGAGTCTTTGGTTGGCTGGATTTGGAGAAATTCTTCCTCTATGTCTCTTGGCAGTAATAACCATGCAGGGTTTATCGTTTGGGTTGAGCCCAGATTGGATTTGCAACCTTGGTTTGCAGGTTTACAGTCCGAGCTCCTCAG                                                                                            ]
[+] EMBL BI306397             [                       GCCCGCGGCGGCGGCCGTGTGGATGTGGCCCGCAGCGGCGACGGCCGCGCCGTTGCTGCCCGCGACGGCGACGGCTGCGCCGATGCAGGCCGCGACGGTGTCGGTGGT GTGGATGTGTCTTGCAA TGGCGGCGTG GATGCGGCTC GGATGATCTCC TCTTCTTCAACCTTCTCTATCGAGTTACCAAGACAGCAAGTTCTTCACCACCATCTTCGGATTGAGTCTTTGGTTGGCTGGATTTGGAGAAATTCTTCCTCTATGTCTCTTGGCAGTAATAACCATGCAGGGTTTATCGTTTGGGTTGAGCCCAGATTGGATTTGCAACCTTGGTTTGCAGGTTTACAGTCCGAGCTCCTCAG                                                                                            ]
[+] EMBL BI306428             [                       GCCCGCGGCGGCGGCCGTGTGGATGTGGCCCGCAGCGGCGACGGCCGCGCCGTTGCTGCCCGCGACGGCGACGGCTGCGCCGATGCAGGCCGCGACGGTGTCGGTGGT GTGGATGTGTCTTGCAA TGGCGGCGTG GATGCGGCTC GGATGATCTCC TCTTCTTCAACCTTCTCTATCGAGTTACCAAGACAGCAAGTTCTTCACCACCATCTTCGGATTGAGTCTTTGGTTGGCTGGATTTGGAGAAATTCTTCCTCTATGTCTCTTGGCAGTAATAACCATGCAGGGTTTATCGTTTGGGTTGAGCCCAGATTGGATTTGCAACCTTGGTTTGCAGGTTTACAGTCCGAGCTCCTCAG                                                                                            ]
[+] EMBL CB967017             [                       GCCCGCGGCGGCGG CGTGTGGATGTGGCCCGCAGCGGCGACGG CGCGCCGTTGCTGCCCGCGACGGCGACGGCTGCGCCGATGCAGGCCGCGACGGTGTCGGTGGT GTGGATGTGTCTTGCAA TGGCGGCGTG GATGCGGCTC GGATGATCTCC TCTTCTTCAACCTTCTCTATCGAGTTACCAAGACAGCAAGTTCTTCACCACCATCTTCGGATTGAGTCTTTGGTTGGCTGGATTTGGAGAAATTCTTCCTCTATGTCTCTTGGCAGTAATAACCATGCAGGGTTTATCGTTTGGGTTGAGCCCAGATTGGATTTGCAACCTTGGTTTGCAGGTTTACAGTCCGAGCTCCTCAG                                                                                            ]
[+] EMBL BU673286             [                          CGCGGAGGCGGCCGTGTGGATGTGGCCCGCAGCGGCGACGGCCGCGCCGTTGCTGCCCGCGACGGCGACGGATGCGCCGATGCAGGCCGCGACGGTGTCGGTGGT GTGGATGTGTCTTGCAA TGGCGGCGTG GATGCGGCTC GGATGATCTCC TCTTCTTCAACCTCCTCTATCGAGTTACCAAGACAGCAAGTTCTTCACCACCATCTTCGGATTGAGTCTTTGGTTGGCTGGATTTGGAGAAATTCTTCCTCTATGTCTCTTGGCAGTAATAACCATGCAGGGTTTATCGTTTGGGTTGAGCCCAGATTGGATTTGCAACCTTGGTTTGCAGGTTTACAGTCCGAGCTCCTCAGATTCAACAATGAATTCAATTCCCCTAAATGCTGTCATTTAATCAAGTGTGATGTGTATATTTTAAAAAAAAAAAACAACAACAAAAAAAAAA]




>consensus_8939#0
AATACCTTCGGCTCACCGATGCTGCCCGCGGCGGCGGCCGTGTGGATGTGGCCCGCAGCG
GCGACGGCCGCGCCGTTGCTGCCCGCGACGGCGACGGCTGCGCCGATGCAGGCCGCGACG
GTGTCGGTGGTGTGGATGTGTCTTGCAATGGCGGCGTGGATGCGGCTCGGATGATCTCCT
CTTCTTCAACCTTCTCTATCGAGTTACCAAGACAGCAAGTTCTTCACCACCATCTTCGGA
TTGAGTCTTTGGTTGGCTGGATTTGGAGAAATTCTTCCTCTATGTCTCTTGGCAGTAATA
ACCATGCAGGGTTTATCGTTTGGGTTGAGCCCAGATTGGATTTGCAACCTTGGTTTGCAG
GTTTACAGTCCGAGCTCCTCAGATTCAACAATGAATTCAATTCCCCTAAATGCTGTCATT
TAATCAAGTGTGATGTGTATATTTTAAAAAAAAAAAACAACAACAAAAAAAAAA

clustalw multiple alignements is not computed in this case