|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8941#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3089 fasta sequence
[TTCCTTATCTGAGTTGAAAGTTTTCAAATCTCAAGTTAAAAATTTTCAAATCTGAGTTAAAAGTTTTTAAAATTTAACTTTAAAATTTAAAACTTAAATCGAAAGTTTTCAAATCTAACTTAAATTTTTTTCAATCTGTTAGTAAAATCTCCTAAAAAAATCTCCATAATTTTTTCCTAATTATCGTCATTAGTGTTAAGTGTTAAATATATTAACTAATATAGGTAGACTAAATTGGAGGGAGTGCTCGCGAGCTATTTCCCTGGCGCGCACGCGCGCCCTAGCAACCCCCGCCCACGGAAACCGCCTTCGTCGCACACGCGCTCACGGTACGCCGCCGCCTCGGTCCTCCCAATGCCGCCCACCGAGTCGCGCCGACGTCATCGCCGTGCCGTGCCTCTCCTCCTCCGCCGCCCAACATCACTGGCGTCGCCGCGTGTGCACTGCCGCCATCACCAGCCAATCACGAACGGAAGCCGGTGCCGTCCCCTTCTCCTTCACGAAGTCGTCGCCGTGCCTTCCTCGTCCTCCTCCGGCGAACCGACCTTCGCAAGCAAACCGACATCTGCCGCCTATAAATAGCCGGCGAGCCCTCCCCTTTTCTCAACACAAAACCGAGCGGAGCTCTGTCTCTGTCTCTGTCTCTCCTGGCCATGTCCGGCCATGGCCGCCACTGATCGATCTCCATCCATAGAGCATCCCAAATCAAATCCATTCGCCACCAGCCACCCCGTACACCGAAGAACCCATTTTACCCACTTTCCCCTTCACTTCCCCTTTGAATCGAGCGTCACCGGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGGTTCATGCAATTGTGCTCGCCGTTCCGGCCTCCTCTCTCACTCCCTTGTCCAGCCACCGCACTCCCTAGGTGTGCCACACCCGGGAACACAACCCGCCGCCAGTATCGCCGCCCTCCGGCCACTGGAGCACCGACGCCCCTCCTCTCCCTCCTGTCAGTTTGCTCGGCAGAAGAAGGAAGAGGAGGAAGATAACGGGAGGAAGGAGGAAAAGAAAGCCTGACAGGTGGGCCCATGAATACGTCGTGCAGCCGAGTGCCGGGTGGAAGCGCCAAACGATAAGCGACGTTGTTGATGACGGCGAGGACCTGGTACGGTCCATAGAAACGGGGCCTCAACTTGCCCTTGGTTGCATCCGGCAGCGACGCCGGCACTCGGTGGCGAACGCGAAGCCATAGATGCTTGTCATAGTAGCGCTTGGCGTACTGTTGGGCCTGCTCCAGACGGACGCGAACGTCGGCGAGGAATGCGTCCCGTTCCTCCATGGACTGCGCCACAGCCACCACCCGCGTCTCACTGGCGTCGTAGGCGCGGATAGATGGAGGGTCCCTGCCATAGACGAGCTTGAATGGCGTCGTGCGGAGTGCGGCGTGGAAGGAGGTGTTGTAGACGTATTCCGCCCATGGCAACCAGCGAAGCCAGTGGCGCGGACGGTCACCGGTGAGGCAGCGAGGATACATGGAAATGGTCTTGTTGGCCGCCTCCGACTGTCCGTCCGATTGGGGGTGGAACGCTGAGCTCCGGTGCAACTTGGTGCCCGTTGCCGCGAAGAGCGCTGTCCAGAACGCCGAGGGGAACACGGTGTCCCGGTCGGAGACGATGGACGTGGGTACCCCATGGAGACGGACAATGTCGGTGAAGAACGCGCGCACCACCGTCTCCGCCGTGTACAGGTGCGCCAGGGCGATGAAGTGGGCATACTTGGAGATCTTGTCCACCACCGTTAGTATGACGGTCTTGCCTGCAACGCGCGGTAAACCCTCGACGAAGTCCATGGCGATATCGGACCACACCGCCGCCGGCACCGGAAGCGGAAGCAGCAACCCCGCCGGGTGTAAGTGCTCCGTCTTGTTGCGCTGGCAGACAAGGCAGCCACGAACAAAGTCGCTGACGAGGCGGCGGTCATGAGGCGTGTGGAAGTCACGCCGGAGTCGATGCAGAGTCTTTTGATGCCTTCGTGTCCTTCGTCGTGAGCGGCCGCCACGATCGCCGATAGCCACGGTGACTCGGGAGGCACGTAGATGCGGCGCTTGAAGGTGACGAAGCCGTCCACGAGTGCCCACGGCGCACCGCATGTTCCTGCGTTGATTTCATCCCGGAGGGTCACCAGTGCCGGGTCGGAGGCCGAGGAAGAACGC-AGCTCGTGGAGGAGGTCGAATGTTGGCATCGACAATGCAAGAAGCTGGCCCTCCGGTGGCGCGCGGCGTGACAGGGCGTCTGCCGCCGCGTTCTGCTTCCCTGGTTTGTATTCCACGGTGAAATCAAATCCCAGTAATTTACTTACCCAATGGTGCTGTGGAATCGTGGAAAGCCGCTGATCAAGCAGGTATTTGAGGCTGTAATGGTCCGTCTTCACGAGAAATTGGCGCCCCCACAAATACGGTCTCCAGTGTCGAACAGCTTGCACTAGTCCGATGAGCTCCCGTTCATATGCCGCCAGTGCTTGGTGTCGAGCGGCGACCGGCCGACTGAAGTACGCGATCGGCCCGGCGCCTTGGTGTAGGACCGCGCCAAACCCCGTGCCAGACGCGTCGCACTCCACCGTGAAAGCCGTGGTGAAGTCTGGAAGGGTGAGGACCGGAGCGGTGGTCAGTGCGAGCTTGAGCCGCTGGAACGCATCGTCGGCGGATGGTGACCATGTGAACCCGTCCTTGCGGAGCAATTGCGTCAGCGGTGCGGCCACCGTCCCAAAATCTTGGATGAACTTGCGGTAGTAGCCGGCCAACCCGAGAAACCCGCGAAGATCCTTGGGTGAGTGAGGGCGCGGCCAGTCCACGACGGCTTGAATTTTGGAGGCATCCATGGCGACGCCGTGTCGCGGCACAATGTGGCAAGTAGGCGACGCTGGCGTCCCCGAATGAGCACTTGGAGCGCTTGACGAAGAGTTTGGCCGCGCGGAGCGCCATGAACACGGTACGGACGTGCTGTAGATGTGCTGTCCACGACGGGCTGTAGATGAGAATGTCGTCGAAGAAGACGAGGACGAAACGGCGGAGGAACGGCCGGAGCACATCGTTCATCAGGGATTGGAACGTGGTTGG]
[+] EMBL CB629451 [TTCCTTATCTGAGTTGAAAGTTTTCAAATCTCAAGTTAAAAATTTTCAAATCTGAGTTAAAAGTTTTTAAAATTTAACTTTAAAATTTAAAACTTAAATCGAAAGTTTTCAAATCTAACTTAAATTTTTTTCAATCTGTTAGTAAAATCTCCTAAAAAAATCTCCATAATTTTTTCCTAATTATCGTCATTAGTGTTAAGTGTTAAATATATTAACTAATATAGGTAGACTAAATTGGAGGGAGTGCTCGCGAGCTATTTCCCTGGCGCGCACGCGCGCCCTAGCAACCCCCGCCCACGGAAACCGCCTTCGTCGCACACGCGCTCACGGTACGCCGCCGCCTCGGTCCTCCCAATGCCGCCCACCGAGTCGCGCCGACGTCATCGCCGTGCCGTGCCTCTCCTCCTCCGCCGCCCAACATCACTGGCGTCGCCGCGTGTGCACTGCCGCCATCACCAGCCAATCACGAACGGAAGCCGGTGCCGTCCCCTTCTCCTTCACGAAGTCGTCGCCGTGCCTTCCTCGTCCTCCTCCGGCGAACCGACCTTCGCAAGCAAACCGACATCTGCCGCCTATAAATAGCCGGCGAGCCCTCCCCTTTTCTCAACACAAAACCGAGCGGAGCTCTGTCTCTGTCTCTGTCTCTCCTGGCCATGTCCGGCCATGGCCGCCACTGATCGATCTCCATCCATAGAGCATCCCAAATCAAATCCATTCGCCACCAGCCACCCCGTACACCGAAGAACCCATTTTACCCACTTTCCCCTTCACTTCCCCTTTGAATCGAGCGTCACCGGAGCTCTCTCTCTCTCTCTCT ]
[+] EMBL CB629449 [tttcgaATCTGAGTTGAAAGTTTTCAAATCTCAAGTTAAAAATTTTCAAATCTGAGTTAAAAGTTTTTAAAATTTAACTTTAAAATTTAAAACTTAAATCGAAAGTTTTCAAATCTAACTTAAATTTTTTTCAATCTGTTAGTAAAATCTCCTAAAAAAATCTCCATAATTTTTTCCTAATTATCGTCATTAGTGTTAAGTGTTAAATATATTAACTAATATAGGTAGACTAAATTGGAGGGAGTGCTCGCGAGCTATTTCCCTGGCGCGCACGCGCGCCCTAGCAACCCCCGCCCACGGAAACCGCCTTCGTCGCACACGCGCTCACGGTACGCCGCCGCCTCGGTCCTCCCAATGCCGCCCACCGAGTCGCGCCGACGTCATCGCCGTGCCGTGCCTCTCCTCCTCCGCCGCCCAACATCACTGGCGTCGCCGCGTGTGCACTGCCGCCATCACCAGCCAATCACGAACGGAAGCCGGTGCCGTCCCCTTCTCCTTCACGAAGTCGTCGCCGTGCCTTCCTCGTCCTCCTCCGGCGAACCGACCTTCGCAAGCAAACCGACATCTGCCGCCTATAAATAGCCGGCGAGCCCTCCCCTTTTCTCAACACAAAACCGAGCGGAGCTCTGTCTCTGTCTCTGTCTCTCCTGGCCATGTCCGGCCATGGCCGCCACTGATCGATCTCCATCCATAGAGCATCCCAAATCAAATCCATTCGCCACCAGCCACCCCGTACACCGAAGAACCCATTTTACCCACTTTCCCCTTCACTTCCCCTTTGAATCGAGCGTCACCGGAGCTCTCTC ]
[+] EMBL AK106636 [ cgagccgagCTCTGTCTCTGTCTCTCCTGGCCATGTCCGGCCATGGCCGCCACCGATCGATCTCCATCCATAGAGCATCCCAAACCAAATCCATTCGCCACCAGCCACCCCGTACACCGAAGAACCCATTTTACCCACTTCCCCCTTCACTTCCCCTTTGAATCGAGCGTCACCGGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGGTTCATGCAATTGTGCTCGCCGTTCCGGCCTCCTCTCTCACTCCCTTGTCCAGCCACCGCACTCCCTAGGTGTGCCACACCCGGGAACACAACCCGCCGCCAGTATCGCCGCCCTCCGGCCACTGGAGCACCGACGCCCCTCCTCTCCCTCCTGTCAGTTTGCTCGGCAGAAGAAGGAAGAGGAGGAAGATAACGGGAGGAAGGAGGAAAAGAAAGCCTGACAGGTGGGCCCATGAATACGTCGTGCAGCCGAGTGCCGGGTGGAAGCGCCAAACGATAAGCGACGTTGTTGATGACGGCGAGGACCTGGTACGGTCCATAGAAACGGGGCCTCAACTTGCCCTTGGTTGCATCCGGCAGCGACGCCGGCACTCGGTGGCGAACGCGAAGCCATAGATGCTTGTCATAGTAGCGCTTGGCGTACTGTTGGGCCTGCTCCAGACGGACGCGAACGTCGGCGAGGAATGCGTCCCGTTCCTCCATGGACTGCGCCACAGCCACCACCCGCGTCTCACTGGCGTCGTAGGCGCGGATAGATGGAGGGTCCCTGCCATAGACGAGCTTGAATGGCGTCGTGCGGAGTGCGGCGTGGAAGGAGGTGTTGTAGACGTATTCCGCCCATGGCAACCAGCGAAGCCAGTGGCGCGGACGGTCACCGGTGAGGCAGCGAGGATACATGGAAATGGTCTTGTTGGCCGCCTCCGACTGTCCGTCCGATTGGGGGTGGAACGCTGAGCTCCGGTGCAACTTGGTGCCCGTTGCCGCGAAGAGCGCTGTCCAGAACGCCGAGGGGAACACGGTGTCCCGGTCGGAGACGATGGACGTGGGTACCCCATGGAGACGGACAATGTCGGTGAAGAACGCGCGCACCACCGTCTCCGCCGTGTACAGGTGCGCCAGGGCGATGAAGTGGGCATACTTGGAGATCTTGTCCACCACCGTTAGTATGACGGTCTTGCCTGCAACGCGCGGTAAACCCTCGACGAAGTCCATGGCGATATCGGACCACACCGCCGCCGGCACCGGAAGCGGAAGCAGCAACCCCGCCGGGTGTAAGTGCTCCGTCTTGTTGCGCTGGCAGACAAGGCAGCCACGAACAAAGTCGCTGACGAGGCGGCGGTCATGAGGCGTGTGGGAGTCACGCCGGAGTCGATGCAGAGTCTTTTGATGCCTTCGTGTCCTTCGTCGTGAGCGGCCGCCACGATCGCCGATAGCCACGGTGACTCGGGAGGCACGTAGATGCGGCGCTTGAAGGTGACGAAGCCGTCCACGAGTGCCCACGGCGCACCGCATGTTCCTGCGTTGATTTCATCCCGGAGGGTCACCAGTGCCGGGTCGGAGGCCGAGGAAGAACGC AGCTCGTGGAGGAGGTCGAATGTTGGCATCGACAATGCAAGAAGCTGGCCCTCCGGTGGCGCGCGGCGTGACAGGGCGTCTGCCGCCGCGTTCTGCTTCCCTGGTTTGTATTCCACGGTGAAATCAAATCCCAGTAATTTACTTACCCAATGGTGCTGTGGAATCGTGGAAAGCCGCTGATCAAGCAGGTATTTGAGGCTGTAATGGTCCGTCTTCACGAGAAATTGGCGCCCCCACAAATACGGTCTCCAGTGTCGAACAGCTTGCACTAGTCCGATGAGCTCCCGTTCATATGCCGCCAGTGCTTGGTATCGAGCGGCGACCGGCCGACTGAAGTACGCGATCGGCCCGGCGCCTTGGTGTAGGACCGCGCCAAACCCCGTGCCAGACGCGTCGCACTCCACCGTGAAAGCCGTGGTGAAGTCTGGAAGGGTGAGGACCGGAGCGGTGGTCAGTGCGAGCTTGAGCCGCTGGAACGCATCGTCGGCGGATGGTGACCATGTGAACCCGTCCTTGCGGAGCAATTGCGTCAGCGGTGCGGCCACCGTCCCAAAATCTTGGATGAACTTGCGGTAGTAGCCGGCCAACCCGAGAAACCCGCGAAGATCCTTGGGTGAGTGAGGGCGCGGCCAGTCCACGACGGCTTGAATTTTGGAGGCATCCATGGCGACGCCGTGTCGCGGCACAATGTGGCAAGTAGGCGACGCTGGCGTCCCCGAATGAGCACTTGGAGCGCTTGACGAAGAGTTTGGCCGCGCGGAGCGCCATGAACACGGTACGGACGTGCTGTAGATGTGCTGTCCACGACGGGCTGTAGATGAGAATGTCGTCGAAGAAGACGAGGACGAAACGGCGGAGGAACGGCCGGAGCACATCGTTCATCAGGGATTGGAACGTGGTTGG]
[-] EMBL CB629448 [ CATACTNGGAGATCCTGTCCACCACCGTTAGTATGACGGTCTTGCCTGCAACGCGCGGTAAACCCTCGACGAAGTCCATGGCGATATCGGACCACACCGCCGCCGGCACCGGAAGCGGAAGCAGCAACCCCGCCGGGTGTAAGTGCTCCGTCTTGTTGCGCTGGCAGACAAGGCAGCCACGAACAAAGTCGCTGACGAGGCGGCGGTCATGAGGCGTGTGGAAGTCACGCCGGAGTCGATGCAGAGTCTTTTGATGCCTTCGTGTCCTTCGTCGTGAGCGGCCGCCACGATCGCCGATAGCCACGGTGACTCGGGAGGCACGTAGATGCGGCGCTTGAAGGTGACGAAGCCGTCCACGAGTGCCCACGGCGCACCGCATGTTCCTGCGTTGATTTCATCCCGGAGGGTCACCAGTGCCGGGTCGGAGGCCGAGGAAGAACGCAAGCTCGTGGAGGAGGTCGAATGTTGGCATCGACAATGCAAGAAGCTGGCCCTCCGGTGGCGCGCGGCGTGACAGGGCGTCTGCCGCCGCGTTCTGCTTCCCTGGTTTGTATTCCACGGTGAAATCAAATCCCAGTAATTTACTTACCCAATGGTGCTGTGGAATCGTGGAAAGCCGCTGATCAAGCAGGTATTTGAGGCTGTAATGGTCCGTCTTCACGAGAAATTGGCGCCCCCACAAATACGGTCTCCAGTGTCGAACAGCTTGCACTAGTCCGATGAGCTCCCGTTCATATGCCGCCAGTGCTTGGTGTCGAGCGGCGACCGGCCGACTGAAGTACGCGAT ]
[-] EMBL CB629450 [ TAAACCCTCGACGAAGTCCATGGCGATATCGGACCACACCGCCGCCGGCACCGGAAGCGGAAGCAGCAACCCCGCCGGGTGTAAGTGCTCCGTCTTGTTGCGCTGGCAGACAAGGCAGCCACGAACAAAGTCGCTGACGAGGCGGCGGTCATGAGGCGTGTGGAAGTCACGCCGGAGTCGATGCAGAGTCTTTTGATGCCTTCGTGTCCTTCGTCGTGAGCGGCCGCCACGATCGCCGATAGCCACGGTGACTCGGGAGGCACGTAGATGCGGCGCTTGAAGGTGACGAAGCCGTCCACGAGTGCCCACGGCGCACCGCATGTTCCTGCGTTGATTTCATCCCGGAGGGTCACCAGTGCCGGGTCGGAGGCCGAGGAAGAACGCAAGCTCGTGGAGGAGGTCGAATGTTGGCATCGACAATGCAAGAAGCTGGCCCTCCGGTGGCGCGCGGCGTGACAGGGCGTCTGCCGCCGCGTTCTGCTTCCCTGGTTTGTATTCCACGGTGAAATCAAATCCCAGTAATTTACTTACCCAATGGTGCTGTGGAATCGTGGAAAGCCGCTGATCAAGCAGGTATTTGAGGCTGTAATGGTCCGTCTTCACGAGAAATTGGCGCCCCCACAAATACGGTCTCCAGTGTCGAACAGCTTGCACTAGTCCGATGAGCTCCCGTTCATATGCCGCCAGTGCTTGGTGTCGAGCGGCGACCGGCCGACTGAAGAGCGCGAT ]
consensusID : consensus_8941#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1598 fasta sequence
[CGAGCCGAGCTCTGTCTCTGTCTCTCCTGGCCATGTCCGGCCATGGCCGCCACCGATCGATCTCCATCCATAGAGCATCCCAAACCAAATCCATTCGCCACCAGCCACCCCGTACACCGAAGAACCCATTTTACCCACTGGAGCACCGACGCCCCTCCTCTCCCTCCTGTCAGTTTGCTCGGCAGAAGAAGGAAGAGGAGGAAGATAACGGGAGGAAGGAGGAAAAGAAAGCCTGACAGGTGGGCCCATGAATACGTCGTGCAGCCGAGTGCCGGGTGGAAGCGCCAAACGATAAGCGACGTTGTTGATGACGGCGAGGACCTGGTACGGTCCATAGAAACGGGGCCTCAACTTGCCCTTGGTTGCATCCGGCAGCGACGCCGGCACTCGGTGGCGAACGCGAAGCCATAGATGCTTGTCATAGTAGCGCTTGGCGTACTGTTGGGCCTGCTCCAGACGGACGCGAACGTCGGCGAGGAATGCGTCCCGTTCCTCCATGGACTGCGCCACAGCCACCACCCGCGTCTCACTGGCGTCGTAGGCGCGGATAGATGGAGGGTCCCTGCCATAGACGAGCTTGAATGGCGTCGTGCGGAGTGCGGCGTGGAAGGAGGTGTTGTAGACGTATTCCGCCCATGGCAACCAGCGAAGCCAGTGGCGCGGACGGTCACCGGTGAGGCAGCGAGGATACATGGAAATGGTCTTGTTGGCCGCCTCCGACTGTCCGTCCGATTGGGGGTGGAACGCTGAGCTCCGGTGCAACTTGGTGCCCGTTGCCGCGAAGAGCGCTGTCCAGAACGCCGAGGGGAACACGGTGTCCCGGTCGGAGACGATGGACGTGGGTACCCCATGGAGACGGACAATGTCGGTGAAGAACGCGCGCACCACCGTCTCCGCCGTGTACAGGTGCGCCAGGGCGATGAAGTGGGCATACTTGGAGATCTTGTCCACCACCGTTAGTATGACGGTCTTGCCTGCAACGCGCGGTAAACCCTCGACGAAGTCCATGGCGATATCGGACCACACCGCCGCCGGCACCGGAAGCGGAAGCAGCAACCCCGCCGGGTGTAAGTGCTCCGTCTTGTTGCGCTGGCAGACAAGGCAGCCACGAACAAAGTCGCTGACGAGGCGGCGGTCATGAGGCGTGTGGAAGTCACGCCGGAGTCGATGCAGAGTCTTTTGATGCCTTCGTGTCCTTCGTCGTGAGCGGCCGCCACGATCGCCGATAGCCACGGTGACTCGGGAGGCACGTAGATGCGGCGCTTGAAGGTGACGAAGCCGTCCACGAGTGCCCACGGCGCACCGCATGTTCCTGCGTTGATTTCATCCCGGAGGGTCACCAGTGCCGGGTCGGAGGCCGAGGAAGAACGCAGCTCGTGGAGGAGGTCGAATGTTGGCATCGACAATGCAAGAAGCTGGCCCTCCGGTGGCGCGCGGCGTGACAGGGCGTCTGCCGCCGCGTTCTGCTTCCCTGGTTTGTATTCCACGGTGAAATCAAATCCCAGTAATTTACTTACCCAATGGTGCTGTGGAATCGTGGAAAGCCGCTGATCAAGCAGGTATTTGAGGCTGTAATGGTCCGTCTTCACGAGAAATTG]
[+] EMBL AK106390 [CGAGCCGAGCTCTGTCTCTGTCTCTCCTGGCCATGTCCGGCCATGGCCGCCACCGATCGATCTCCATCCATAGAGCATCCCAAACCAAATCCATTCGCCACCAGCCACCCCGTACACCGAAGAACCCATTTTACCCACTGGAGCACCGACGCCCCTCCTCTCCCTCCTGTCAGTTTGCTCGGCAGAAGAAGGAAGAGGAGGAAGATAACGGGAGGAAGGAGGAAAAGAAAGCCTGACAGGTGGGCCCATGAATACGTCGTGCAGCCGAGTGCCGGGTGGAAGCGCCAAACGATAAGCGACGTTGTTGATGACGGCGAGGACCTGGTACGGTCCATAGAAACGGGGCCTCAACTTGCCCTTGGTTGCATCCGGCAGCGACGCCGGCACTCGGTGGCGAACGCGAAGCCATAGATGCTTGTCATAGTAGCGCTTGGCGTACTGTTGGGCCTGCTCCAGACGGACGCGAACGTCGGCGAGGAATGCGTCCCGTTCCTCCATGGACTGCGCCACAGCCACCACCCGCGTCTCACTGGCGTCGTAGGCGCGGATAGATGGAGGGTCCCTGCCATAGACGAGCTTGAATGGCGTCGTGCGGAGTGCGGCGTGGAAGGAGGTGTTGTAGACGTATTCCGCCCATGGCAACCAGCGAAGCCAGTGGCGCGGACGGTCACCGGTGAGGCAGCGAGGATACATGGAAATGGTCTTGTTGGCCGCCTCCGACTGTCCGTCCGATTGGGGGTGGAACGCTGAGCTCCGGTGCAACTTGGTGCCCGTTGCCGCGAAGAGCGCTGTCCAGAACGCCGAGGGGAACACGGTGTCCCGGTCGGAGACGATGGACGTGGGTACCCCATGGAGACGGACAATGTCGGTGAAGAACGCGCGCACCACCGTCTCCGCCGTGTACAGGTGCGCCAGGGCGATGAAGTGGGCATACTTGGAGATCTTGTCCACCACCGTTAGTATGACGGTCTTGCCTGCAACGCGCGGTAAACCCTCGACGAAGTCCATGGCGATATCGGACCACACCGCCGCCGGCACCGGAAGCGGAAGCAGCAACCCCGCCGGGTGTAAGTGCTCCGTCTTGTTGCGCTGGCAGACAAGGCAGCCACGAACAAAGTCGCTGACGAGGCGGCGGTCATGAGGCGTGTGGAAGTCACGCCGGAGTCGATGCAGAGTCTTTTGATGCCTTCGTGTCCTTCGTCGTGAGCGGCCGCCACGATCGCCGATAGCCACGGTGACTCGGGAGGCACGTAGATGCGGCGCTTGAAGGTGACGAAGCCGTCCACGAGTGCCCACGGCGCACCGCATGTTCCTGCGTTGATTTCATCCCGGAGGGTCACCAGTGCCGGGTCGGAGGCCGAGGAAGAACGCAGCTCGTGGAGGAGGTCGAATGTTGGCATCGACAATGCAAGAAGCTGGCCCTCCGGTGGCGCGCGGCGTGACAGGGCGTCTGCCGCCGCGTTCTGCTTCCCTGGTTTGTATTCCACGGTGAAATCAAATCCCAGTAATTTACTTACCCAATGGTGCTGTGGAATCGTGGAAAGCCGCTGATCAAGCAGGTATTTGAGGCTGTAATGGTCCGTCTTCACGAGAAATTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8941#0 TTCCTTATCTGAGTTGAAAGTTTTCAAATCTCAAGTTAAAAATTTTCAAATCTGAGTTAA 60
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 AAGTTTTTAAAATTTAACTTTAAAATTTAAAACTTAAATCGAAAGTTTTCAAATCTAACT 120
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 TAAATTTTTTTCAATCTGTTAGTAAAATCTCCTAAAAAAATCTCCATAATTTTTTCCTAA 180
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 TTATCGTCATTAGTGTTAAGTGTTAAATATATTAACTAATATAGGTAGACTAAATTGGAG 240
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 GGAGTGCTCGCGAGCTATTTCCCTGGCGCGCACGCGCGCCCTAGCAACCCCCGCCCACGG 300
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 AAACCGCCTTCGTCGCACACGCGCTCACGGTACGCCGCCGCCTCGGTCCTCCCAATGCCG 360
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 CCCACCGAGTCGCGCCGACGTCATCGCCGTGCCGTGCCTCTCCTCCTCCGCCGCCCAACA 420
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 TCACTGGCGTCGCCGCGTGTGCACTGCCGCCATCACCAGCCAATCACGAACGGAAGCCGG 480
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 TGCCGTCCCCTTCTCCTTCACGAAGTCGTCGCCGTGCCTTCCTCGTCCTCCTCCGGCGAA 540
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 CCGACCTTCGCAAGCAAACCGACATCTGCCGCCTATAAATAGCCGGCGAGCCCTCCCCTT 600
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 TTCTCAACACAAAACCGAGCGGAGCTCTGTCTCTGTCTCTGTCTCTCCTGGCCATGTCCG 660
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 GCCATGGCCGCCACTGATCGATCTCCATCCATAGAGCATCCCAAATCAAATCCATTCGCC 720
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 ACCAGCCACCCCGTACACCGAAGAACCCATTTTACCCACTTTCCCCTTCACTTCCCCTTT 780
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 GAATCGAGCGTCACCGGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGGTTCATGCAA 840
consensus_8941#1 ----------------------CGAGCCGAGCTCTGTCTCTGTCTCTCCTGGCCATGT-- 36
* **** ***** ******* * ****
consensus_8941#0 TTGTGCTCGCCGTTCCGGCCTCCTCTCTCACTCCCTTGTCCAGCCACCGCACTCCCTAGG 900
consensus_8941#1 -----CCGGCCATGGCCGCCACCGATCGATCTCCATCCATAGAGCATCCCAAACCAAATC 91
* *** * * *** ** ** **** * ** * ** ** *
consensus_8941#0 TGTGCCACACCCGGGAACACAACCCGCCGCCAGTATCGCCGCCCTCCGGCCACTGGAGCA 960
consensus_8941#1 CATTCGCCACC-----AGCCACCCCGTACACCGAAGAACC-CATTTTACCCACTGGAGCA 145
* * **** * ** **** * * * ** * * ***********
consensus_8941#0 CCGACGCCCCTCCTCTCCCTCCTGTCAGTTTGCTCGGCAGAAGAAGGAAGAGGAGGAAGA 1020
consensus_8941#1 CCGACGCCCCTCCTCTCCCTCCTGTCAGTTTGCTCGGCAGAAGAAGGAAGAGGAGGAAGA 205
************************************************************
consensus_8941#0 TAACGGGAGGAAGGAGGAAAAGAAAGCCTGACAGGTGGGCCCATGAATACGTCGTGCAGC 1080
consensus_8941#1 TAACGGGAGGAAGGAGGAAAAGAAAGCCTGACAGGTGGGCCCATGAATACGTCGTGCAGC 265
************************************************************
consensus_8941#0 CGAGTGCCGGGTGGAAGCGCCAAACGATAAGCGACGTTGTTGATGACGGCGAGGACCTGG 1140
consensus_8941#1 CGAGTGCCGGGTGGAAGCGCCAAACGATAAGCGACGTTGTTGATGACGGCGAGGACCTGG 325
************************************************************
consensus_8941#0 TACGGTCCATAGAAACGGGGCCTCAACTTGCCCTTGGTTGCATCCGGCAGCGACGCCGGC 1200
consensus_8941#1 TACGGTCCATAGAAACGGGGCCTCAACTTGCCCTTGGTTGCATCCGGCAGCGACGCCGGC 385
************************************************************
consensus_8941#0 ACTCGGTGGCGAACGCGAAGCCATAGATGCTTGTCATAGTAGCGCTTGGCGTACTGTTGG 1260
consensus_8941#1 ACTCGGTGGCGAACGCGAAGCCATAGATGCTTGTCATAGTAGCGCTTGGCGTACTGTTGG 445
************************************************************
consensus_8941#0 GCCTGCTCCAGACGGACGCGAACGTCGGCGAGGAATGCGTCCCGTTCCTCCATGGACTGC 1320
consensus_8941#1 GCCTGCTCCAGACGGACGCGAACGTCGGCGAGGAATGCGTCCCGTTCCTCCATGGACTGC 505
************************************************************
consensus_8941#0 GCCACAGCCACCACCCGCGTCTCACTGGCGTCGTAGGCGCGGATAGATGGAGGGTCCCTG 1380
consensus_8941#1 GCCACAGCCACCACCCGCGTCTCACTGGCGTCGTAGGCGCGGATAGATGGAGGGTCCCTG 565
************************************************************
consensus_8941#0 CCATAGACGAGCTTGAATGGCGTCGTGCGGAGTGCGGCGTGGAAGGAGGTGTTGTAGACG 1440
consensus_8941#1 CCATAGACGAGCTTGAATGGCGTCGTGCGGAGTGCGGCGTGGAAGGAGGTGTTGTAGACG 625
************************************************************
consensus_8941#0 TATTCCGCCCATGGCAACCAGCGAAGCCAGTGGCGCGGACGGTCACCGGTGAGGCAGCGA 1500
consensus_8941#1 TATTCCGCCCATGGCAACCAGCGAAGCCAGTGGCGCGGACGGTCACCGGTGAGGCAGCGA 685
************************************************************
consensus_8941#0 GGATACATGGAAATGGTCTTGTTGGCCGCCTCCGACTGTCCGTCCGATTGGGGGTGGAAC 1560
consensus_8941#1 GGATACATGGAAATGGTCTTGTTGGCCGCCTCCGACTGTCCGTCCGATTGGGGGTGGAAC 745
************************************************************
consensus_8941#0 GCTGAGCTCCGGTGCAACTTGGTGCCCGTTGCCGCGAAGAGCGCTGTCCAGAACGCCGAG 1620
consensus_8941#1 GCTGAGCTCCGGTGCAACTTGGTGCCCGTTGCCGCGAAGAGCGCTGTCCAGAACGCCGAG 805
************************************************************
consensus_8941#0 GGGAACACGGTGTCCCGGTCGGAGACGATGGACGTGGGTACCCCATGGAGACGGACAATG 1680
consensus_8941#1 GGGAACACGGTGTCCCGGTCGGAGACGATGGACGTGGGTACCCCATGGAGACGGACAATG 865
************************************************************
consensus_8941#0 TCGGTGAAGAACGCGCGCACCACCGTCTCCGCCGTGTACAGGTGCGCCAGGGCGATGAAG 1740
consensus_8941#1 TCGGTGAAGAACGCGCGCACCACCGTCTCCGCCGTGTACAGGTGCGCCAGGGCGATGAAG 925
************************************************************
consensus_8941#0 TGGGCATACTTGGAGATCTTGTCCACCACCGTTAGTATGACGGTCTTGCCTGCAACGCGC 1800
consensus_8941#1 TGGGCATACTTGGAGATCTTGTCCACCACCGTTAGTATGACGGTCTTGCCTGCAACGCGC 985
************************************************************
consensus_8941#0 GGTAAACCCTCGACGAAGTCCATGGCGATATCGGACCACACCGCCGCCGGCACCGGAAGC 1860
consensus_8941#1 GGTAAACCCTCGACGAAGTCCATGGCGATATCGGACCACACCGCCGCCGGCACCGGAAGC 1045
************************************************************
consensus_8941#0 GGAAGCAGCAACCCCGCCGGGTGTAAGTGCTCCGTCTTGTTGCGCTGGCAGACAAGGCAG 1920
consensus_8941#1 GGAAGCAGCAACCCCGCCGGGTGTAAGTGCTCCGTCTTGTTGCGCTGGCAGACAAGGCAG 1105
************************************************************
consensus_8941#0 CCACGAACAAAGTCGCTGACGAGGCGGCGGTCATGAGGCGTGTGGAAGTCACGCCGGAGT 1980
consensus_8941#1 CCACGAACAAAGTCGCTGACGAGGCGGCGGTCATGAGGCGTGTGGAAGTCACGCCGGAGT 1165
************************************************************
consensus_8941#0 CGATGCAGAGTCTTTTGATGCCTTCGTGTCCTTCGTCGTGAGCGGCCGCCACGATCGCCG 2040
consensus_8941#1 CGATGCAGAGTCTTTTGATGCCTTCGTGTCCTTCGTCGTGAGCGGCCGCCACGATCGCCG 1225
************************************************************
consensus_8941#0 ATAGCCACGGTGACTCGGGAGGCACGTAGATGCGGCGCTTGAAGGTGACGAAGCCGTCCA 2100
consensus_8941#1 ATAGCCACGGTGACTCGGGAGGCACGTAGATGCGGCGCTTGAAGGTGACGAAGCCGTCCA 1285
************************************************************
consensus_8941#0 CGAGTGCCCACGGCGCACCGCATGTTCCTGCGTTGATTTCATCCCGGAGGGTCACCAGTG 2160
consensus_8941#1 CGAGTGCCCACGGCGCACCGCATGTTCCTGCGTTGATTTCATCCCGGAGGGTCACCAGTG 1345
************************************************************
consensus_8941#0 CCGGGTCGGAGGCCGAGGAAGAACGCAGCTCGTGGAGGAGGTCGAATGTTGGCATCGACA 2220
consensus_8941#1 CCGGGTCGGAGGCCGAGGAAGAACGCAGCTCGTGGAGGAGGTCGAATGTTGGCATCGACA 1405
************************************************************
consensus_8941#0 ATGCAAGAAGCTGGCCCTCCGGTGGCGCGCGGCGTGACAGGGCGTCTGCCGCCGCGTTCT 2280
consensus_8941#1 ATGCAAGAAGCTGGCCCTCCGGTGGCGCGCGGCGTGACAGGGCGTCTGCCGCCGCGTTCT 1465
************************************************************
consensus_8941#0 GCTTCCCTGGTTTGTATTCCACGGTGAAATCAAATCCCAGTAATTTACTTACCCAATGGT 2340
consensus_8941#1 GCTTCCCTGGTTTGTATTCCACGGTGAAATCAAATCCCAGTAATTTACTTACCCAATGGT 1525
************************************************************
consensus_8941#0 GCTGTGGAATCGTGGAAAGCCGCTGATCAAGCAGGTATTTGAGGCTGTAATGGTCCGTCT 2400
consensus_8941#1 GCTGTGGAATCGTGGAAAGCCGCTGATCAAGCAGGTATTTGAGGCTGTAATGGTCCGTCT 1585
************************************************************
consensus_8941#0 TCACGAGAAATTGGCGCCCCCACAAATACGGTCTCCAGTGTCGAACAGCTTGCACTAGTC 2460
consensus_8941#1 TCACGAGAAATTG----------------------------------------------- 1598
*************
consensus_8941#0 CGATGAGCTCCCGTTCATATGCCGCCAGTGCTTGGTGTCGAGCGGCGACCGGCCGACTGA 2520
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 AGTACGCGATCGGCCCGGCGCCTTGGTGTAGGACCGCGCCAAACCCCGTGCCAGACGCGT 2580
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 CGCACTCCACCGTGAAAGCCGTGGTGAAGTCTGGAAGGGTGAGGACCGGAGCGGTGGTCA 2640
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 GTGCGAGCTTGAGCCGCTGGAACGCATCGTCGGCGGATGGTGACCATGTGAACCCGTCCT 2700
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 TGCGGAGCAATTGCGTCAGCGGTGCGGCCACCGTCCCAAAATCTTGGATGAACTTGCGGT 2760
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 AGTAGCCGGCCAACCCGAGAAACCCGCGAAGATCCTTGGGTGAGTGAGGGCGCGGCCAGT 2820
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 CCACGACGGCTTGAATTTTGGAGGCATCCATGGCGACGCCGTGTCGCGGCACAATGTGGC 2880
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 AAGTAGGCGACGCTGGCGTCCCCGAATGAGCACTTGGAGCGCTTGACGAAGAGTTTGGCC 2940
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 GCGCGGAGCGCCATGAACACGGTACGGACGTGCTGTAGATGTGCTGTCCACGACGGGCTG 3000
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 TAGATGAGAATGTCGTCGAAGAAGACGAGGACGAAACGGCGGAGGAACGGCCGGAGCACA 3060
consensus_8941#1 ------------------------------------------------------------
consensus_8941#0 TCGTTCATCAGGGATTGGAACGTGGTTGG 3089
consensus_8941#1 -----------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||