|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8960#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2131 fasta sequence
[TTTCCCATGGTAGGATACTTCCACCCAGCTTCCCTCCTCTCACCCTTATATAAAGTTCTTGCTGCTGTGACTCTGCTTTGCTTGCTTCTTCACCCAACTACCACCACCTCTGTGTTTTCCTGCACTCTCCTTGCTAGTGGTGTGACTGTGAAGGTGGCGGAGCCTGCATGGAAGGGCTGACGAGCGAGCAGATGGTGGCGTTCCAGGAGGCGTTCTTGCTCTTCGACAAGAACGGCGATGGTTAGTTTCAACTCTCCTCTTGCCTTCCTTCCTTTTGGTTTCAGCGTTTGCTGAGATTGTTGTTCGTTTGCATTTCTTGGTTATAGCTGTGATGATTTTGGAAGCAATGTTAGGAGTTTCAGAGTAATTGGTCTTGGGGAATCTTGTTTTGTTGTTTATGTCAACTGTTGATGATAGGAGGATAGAGCATGGAGGGAGAAAAGTAAAGGGTTCTTGTCTGAACTGTTCAACTTGTCGCTTAGAACTTTCTATTGCATCCTACTTGCTGAGACATTTTTTTCCTCGAAAACTCCTCGGTGTAAAGAAGGCTGACCTTATCTGAATCGTTACTTTTTTTCAATAATGATCTAAATCATTTAGATGGTTCAGGAATTTTTTATATATATGTATTACATCTTGTTTTAATTTGTGTGCTGGAGCTGTAGATGGAATTGGAATTTCTGTGTTCTTAGGAAACGTTTCCCTGAAGTTTCTACGCTGCCCAATGACAGGGATTTGCTTGCTGCACGACTAGTTTGAGAGCTTCCTTTGGTCAAAGAATCATTCAGTTTGTGACAGAAAGGTGCTTGTTATTGGCTCACTCGTTTTCTTGACTAGTGAGGGCCCTTTAATCTTTGCAATGTGTAACCTACCTAATTTGTTTAGAAAAAGTTGTTGAGACATGCTTATCTAGTGGTCAAGTTCCTTAAGTAATCCGTAATATGTCCTCCAAAACTGCTTTTCTGATATTTGTGCTACCACTACTTGCCATTAACTCTATGATATACACATAGTTATTATTAAATAGTAGTTAAACCATTCATTGGCCCTTGACGTCTCTATCTTGGTCAATGATTCTGACCGTGTTTTGCACATGGTGTGGTCTTGGTCTTCGTTTTGGATATGCACAAAAACCTACTATGTGCTAGTAAGCAAATAGCAATAGCATTGGAGGCATGTTTTCACGGCTATTATCTTCAGTTACACAACAATGAAATCCTGCTAATATTTACAGCCTTCAGGTCTATGCGTCTATGATATCCTAATTGACATTTGATATTGGAACCTTTGTCATATATGTAGGATGCATCACCTTGGAAGAGCTGGCTGCGGTGACTCGTTCTCTTGGCCTTGAGCCGACCGATCAGGAGCTCAACGACATGATGAGGGAAGTTGATACAGATGGCAATGGGATCATAGATTTTCAGGAGTTCCTGAGCCTCATTGCCAGGAAGATGAAGGTGAAGCTTGAACTTTGATGGATACTTTAATTTGATGATCTACAGTATCTGTTTCCCCTTTGCCAAACTAGATTTCCAATATCTGTCTCTGCAATTGCATTCCATGCGTATCGCAGGATGGGGATGGCGACGAAGAGCTGAAAGAAGCTTTCGAGGTCCTAGACAAGGATCAGAATGGTTTTATCTCCCCAACTGAGGTGGTTTAGTACCTCAAGCAGTTCAGACCATTAATTTTCAAGCTGTTATCCATCATTTCTGACCATGTTCTTGTTCATGTGTGCAGCTGAGGACAGTGATGACCAATCTTGGGGAGAAGATGACAGACGAGGAGGTTGAGCAGATGATAAGGGAGGCGGATACCGATGGCGACGGGCAGGTGAACTACGATGAATTTGTGATAATGATGAAAAACGCTGAACGGAAGATATCTGGGTGAAAAGATGCCGTTCATAGATCATAAGTGTGAACCACTGATCCCCAAATTTGGGAGCATCTTTTCCACTGTAAATTCCATTCTCTCAATTACTGTATTTGAACCACAAAATTTGGACTTCAGCTATGGGTAATTGCAGCTTGTAAGATTGTGATTTAAAACTATACTAAGGTTGTGGTTTTATTTCAAAAGTTGTTCGCTTTTGCGAACTATGTATTAGAAATTGACATATACTTAG]
[+] EMBL AK069620 [TTTCCCATGGTAGGATACTTCCACCCAGCTTCCCTCCTCTCACCCTTATATAAAGTTCTTGCTGCTGTGACTCTGCTTTGCTTGCTTCTTCACCCAACTACCACCACCTCTGTGTTTTCCTGCACTCTCCTTGCTAGTGGTGTGACTGTGAAGGTGGCGGAGCCTGCATGGAAGGGCTGACGAGCGAGCAGATGGTGGCGTTCCAGGAGGCGTTCTTGCTCTTCGACAAGAACGGCGATGGTTAGTTTCAACTCTCCTCTTGCCTTCCTTCCTTTTGGTTTCAGCGTTTGCTGAGATTGTTGTTCGTTTGCATTTCTTGGTTATAGCTGTGATGATTTTGGAAGCAATGTTAGGAGTTTCAGAGTAATTGGTCTTGGGGAATCTTGTTTTGTTGTTTATGTCAACTGTTGATGATAGGAGGATAGAGCATGGAGGGAGAAAAGTAAAGGGTTCTTGTCTGAACTGTTCAACTTGTCGCTTAGAACTTTCTATTGCATCCTACTTGCTGAGACATTTTTTTCCTCGAAAACTCCTCGGTGTAAAGAAGGCTGACCTTATCTGAATCGTTACTTTTTTTCAATAATGATCTAAATCATTTAGATGGTTCAGGAATTTTTTATATATATGTATTACATCTTGTTTTAATTTGTGTGCTGGAGCTGTAGATGGAATTGGAATTTCTGTGTTCTTAGGAAACGTTTCCCTGAAGTTTCTACGCTGCCCAATGACAGGGATTTGCTTGCTGCACGACTAGTTTGAGAGCTTCCTTTGGTCAAAGAATCATTCAGTTTGTGACAGAAAGGTGCTTGTTATTGGCTCACTCGTTTTCTTGACTAGTGAGGGCCCTTTAATCTTTGCAATGTGTAACCTACCTAATTTGTTTAGAAAAAGTTGTTGAGACATGCTTATCTAGTGGTCAAGTTCCTTAAGTAATCCGTAATATGTCCTCCAAAACTGCTTTTCTGATATTTGTGCTACCACTACTTGCCATTAACTCTATGATATACACATAGTTATTATTAAATAGTAGTTAAACCATTCATTGGCCCTTGACGTCTCTATCTTGGTCAATGATTCTGACCGTGTTTTGCACATGGTGTGGTCTTGGTCTTCGTTTTGGATATGCACAAAAACCTACTATGTGCTAGTAAGCAAATAGCAATAGCATTGGAGGCATGTTTTCACGGCTATTATCTTCAGTTACACAACAATGAAATCCTGCTAATATTTACAGCCTTCAGGTCTATGCGTCTATGATATCCTAATTGACATTTGATATTGGAACCTTTGTCATATATGTAGGATGCATCACCTTGGAAGAGCTGGCTGCGGTGACTCGTTCTCTTGGCCTTGAGCCGACCGATCAGGAGCTCAACGACATGATGAGGGAAGTTGATACAGATGGCAATGGGATCATAGATTTTCAGGAGTTCCTGAGCCTCATTGCCAGGAAGATGAAGGTGAAGCTTGAACTTTGATGGATACTTTAATTTGATGATCTACAGTATCTGTTTCCCCTTTGCCAAACTAGATTTCCAATATCTGTCTCTGCAATTGCATTCCATGCGTATCGCAGGATGGGGATGGCGACGAAGAGCTGAAAGAAGCTTTCGAGGTCCTAGACAAGGATCAGAATGGTTTTATCTCCCCAACTGAGGTGGTTTAGTACCTCAAGCAGTTCAGACCATTAATTTTCAAGCTGTTATCCATCATTTCTGACCATGTTCTTGTTCATGTGTGCAGCTGAGGACAGTGATGACCAATCTTGGGGAGAAGATGACAGACGAGGAGGTTGAGCAGATGATAAGGGAGGCGGATACCGATGGCGACGGGCAGGTGAACTACGATGAATTTGTGATAATGATGAAAAACGCTGAACGGAAGATATCTGGGTGAAAAGATGCCGTTCATAGATCATAAGTGTGAACCACTGATCCCCAAATTTGGGAGCATCTTTTCCACTGTAAATTCCATTCTCTCAATTACTGTATTTGAACCACAAAATTTGGACTTCAGCTATGGGTAATTGCAGCTTGTAAGATTGTGATTTAAAACTATACTAAGGTTGTGGTTTTATTTCAAAAGTTGTTCGCTTTTGCGAACTATGTATTAGAAATTGACATATACTTAG]
consensusID : consensus_8960#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 833 fasta sequence
[GAGTAGAAAGCTTCTTCACCCAACTACCACCACCTCTGTGTTTTCCTGCACTCTCCTTGCTAGTGGTGTGACTGTGAAGGTGGCGGAGCCTGCATGGAAGGGCTGACGAGCGAGCAGATGGTGGCGTTCCAGGAGGCGTTCTTGCTCTTCGACAAGAACGGCGATGGATGCATCACCTTGGAAGAGCTGGCTGCGGTGACTCGTTCTCTTGGCCTTGAGCCGACCGATCAGGAGCTCAACGACATGATGAGGGAAGTTGATACAGATGGCAATGGGATCATAGATTTTCAGGAGTTCCTGAGCCTCATTGCCAGGAAGATGAAGGATGGGGATGGCGACGAAGAGCTGAAAGAAGCTTTCGAGGTCCTAGACAAGGATCAGAATGGTTTTATCTCCCCAACTGAGCTGAGGACAGTGATGACCAATCTTGGGGAGAAGATGACAGACGAGGAGGTTGAGCAGATGATAAGGGAGGCGGATACCGATGGCGACGGGCAGGTGAACTACGATGAATTTGTGATAATGATGAAAAACGCTGAACGGAAGATATCTGGGTGAAAAGATGCCGTTCATAGATCATAAGTGTGAACCACTGATCCCCAAATTTGGGAGCATCTTTTCCACTGTAAATTCCATTCTCTCAATTACTGTATTTGAACCACAAAATTTGGACTTCAGCTATGGGTAATTGCAGCTTGTAAGATTGTGATTTAAAACTATACTAAGGTTGTGGTTTTATTTCAAAAGTTGTTCGCTTTTGCGAACTATGTATTAGAAATTGACATATACTTAGAAGGGCGTCTATCCATGTTTTTTATTTTTTTTTGGGAATT]
[+] EMBL CF279320 [GAGTAGAAAGCTTCTTCACCCAACTACCACCACCTCTGTGTTTTCCTGCACTCTCCTTGCTAGTGGTGTGACTGTGAAGGTGGCGGAGCCTGCATGGAAGGGCTGACGAGCGAGCAGATGGTGGCGTTCCAGGAGGCGTTCTTGCTCTTCGACAAGAACGGCGATGGATGCATCACCTTGGAAGAGCTGGCTGCGGTGACTCGTTCTCTTGGCCTTGAGCCGACCGATCAGGAGCTCAACGACATGATGAGGGAAGTTGATACAGATGGCAATGGGATCATAGATTTT ]
[+] EMBL AK067697 [ CCCAACTACCACCACCTCTGTGTTTTCCTGCACTCTCCTTGCTAGTGGTGTGACTGTGAAGGTGGCGGAGCCTGCATGGAAGGGCTGACGAGCGAGCAGATGGTGGCGTTCCAGGAGGCGTTCTTGCTCTTCGACAAGAACGGCGATGGATGCATCACCTTGGAAGAGCTGGCTGCGGTGACTCGTTCTCTTGGCCTTGAGCCGACCGATCAGGAGCTCAACGACATGATGAGGGAAGTTGATACAGATGGCAATGGGATCATAGATTTTCAGGAGTTCCTGAGCCTCATTGCCAGGAAGGTGAAGGATGGGGATGGCGACGAAGAGCTGAAAGAAGCTTTCGAGGTCCTAGACAAGGATCAGAATGGTTTTATCTCCCCAACTGAGCTGAGGACAGTGATGACCAATCTTGGGGAGAAGATGACAGACGAGGAGGTTGAGCAGATGATAAGGGAGGCGGATACCGATGGCGACGGGCAGGTGAACTACGATGAATTTGTGATAATGATGAAAAACGCTGAACGGAAGATATCTGGGTGAAAAGATGCCGTTCATAGATCATAAGTGTGAACCACTGATCCCCAAATTTGGGAGCATCTTTTCCACTGTAAATTCCATTCTCTCAATTACTGTATTTGAACCACAAAATTTGGACTTCAGCTATGGGTAATTGCAGCTTGTAAGATTGTGATTTAAAACTATACTAAGGTTGTGGTTTTATTTCAAAAGTTGTTCGCTTTTGCGAACTATGTATTAGAAATTGACATATACTTAGAAGGGCGTCTATCCATGTTTTTTATTTTTTTTTGGGAATT]
[-] EMBL CB664251 [ TACCACCACCTCTGTGTTTTCCTGCACTCTCCTTGCTAGTGGTGTGACTGTGAAGGTGGCGGAGCCTGCATGGAAGGGCTGACGAGCGAGCAGATGGTGGCGTTCCAGGAGGCGTTCTTGCTCTTCGACAAGAACGGCGATGGATGCATCACCTTGGAAGAGCTGGCTGCGGTGACTCGTTCTCTTGGCCTTGAGCCGACCGATCAGGAGCTCAACGACATGATGAGGGAAGTTGATACAGATGGCAATGGGATCATAGATTTTCAGGAGTTCCTGAGCCTCATTGCCAGGAAGATGAAGGATGGGGATGGCGACGAAGAGCTGAAAGAAGCTTTCGAGGTCCTAGACAAGGATCAGAATGGTTTTATCTCCCCAACTGAGCTGAGGACAGTGATGACCAATCTTGGGGAGAAGATGACAGACGAGGAGGTTGAGCAGATGATAAGGGAGGCGGATACCGATGGCGACGGGCAGGTGAACTACGATGAATTTGTGATAATGATGAAAAACGCTGAACGGAAGATATCTGGGTGAAAAGATGCCGTTCATAGATCATAAGTGTGAACCACTGATCCCCAAATTTGGGAGCATCTTTTCCACTGTAAATTCCATTCTCTCAATTACTGTATTTGAACCACAAAATTTGGACTTCAGCTATGGGTAATTGCAGCTTGTAAGATTGTGA ]
[+] EMBL CB664250 [ CCTCTGTGTTTTCCTGCACTCTCCTTGCTAGTGGTGTGACTGTGAAGGTGGCGGAGCCTGCATGGAAGGGCTGACGAGCGAGCAGATGGTGGCGTTCCAGGAGGCGTTCTTGCTCTTCGACAAGAACGGCGATGGATGCATCACCTTGGAAGAGCTGGCTGCGGTGACTCGTTCTCTTGGCCTTGAGCCGACCGATCAGGAGCTCAACGACATGATGAGGGAAGTTGATACAGATGGCAATGGGATCATAGATTTTCAGGAGTTCCTGAGCCTCATTGCCAGGAAGATGAAGGATGGGGATGGCGACGAAGAGCTGAAAGAAGCTTTCGAGGTCCTAGACAAGGATCAGAATGGTTTTATCTCCCCAACTGAGCTGAGGACAGTGATGACCAATCTTGGGGAGAAGATGACAGACGAGGAGGTTGAGCAGATGATAAGGGAGGCGGATACCGATGGCGACGGGCAGGTGAACTACGATGAATTTGTGATAATGATGAAAAACGCTGAACGGAAGATATCTGGGTGAAAAGATGCCGTTCATAGATCATAAGTGTGAACCACTGATCCCCAAATTTGGGAGCATCTTTTCCACTGTAAATTCCATTCTCTCAATTACTGTATTTGAACCACAAAATTTGGACTTCAGCTATGGGTAATTGCAGCTTGTAAGATTGTG ]
consensusID : consensus_8960#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 824 fasta sequence
[TAAACCCATTCATTGGCCCTTGACGTCTCTATCTTGGTCAATGATTCTGACCGTGTTTTGCACATGGTGTGGTCTTGGTCTTCGTTTTGGATATGCACAAAAACCTACTATGTGCTAGTAAGCAAATAGCAATAGCATTGGAGGCATGTTTTCACGGCTATTATCTTCAGTTACACAACAATGAAATCCTGCTAATATTTACAGCCTTCAGGTCTATGCGTCTATGATATCCTAATTGACATTTGATATTGGAACCTTTGTCATATATGTAGGATGCATCACCTTGGAAGAGCTGGCTGCGGTGACTCGTTCTCTTGGCCTTGAGCCGACCGATCAGGAGCTCAACGACATGATGAGGGAAGTTGATACAGATGGCAATGGGATCATAGATTTTCAGGAGTTCCTGAGCCTCATTGCCAGGAAGATGAAGGATGGGGATGGCGACGAAGAGCTGAAAGAAGCTTTCGAGGTCCTAGACAAGGATCAGAATGGTTTTATCTCCCCAACTGAGCTGAGGACAGTGATGACCAATCTTGGGGAGAAGATGACAGACGAGGAGGTTGAGCAGATGATAAGGGAGGCGGATACCGATGGCGACGGGCAGGTGAACTACGATGAATTTGTGATAATGATGAAAAACGCTGAACGGAAGATATCTGGGTGAAAAGATGCCGTTCATAGATCATAAGTGTGAACCACTGATCCCCAAATTTGGGAGCATCTTTTCCACTGTAAATTCCATTCTCTCAATTACTGTATTTGAACCACAAAATTTGGACTTCAGCTATGGGTAATTGCAGCTTGTAAGATTGTGATTTAAAACT]
[-] EMBL CB666748 [TAAACCCATTCATTGGCCCTTGACGTCTCTATCTTGGTCAATGATTCTGACCGTGTTTTGCACATGGTGTGGTCTTGGTCTTCGTTTTGGATATGCACAAAAACCTACTATGTGCTAGTAAGCAAATAGCAATAGCATTGGAGGCATGTTTTCACGGCTATTATCTTCAGTTACACAACAATGAAATCCTGCTAATATTTACAGCCTTCAGGTCTATGCGTCTATGATATCCTAATTGACATTTGATATTGGAACCTTTGTCATATATGTAGGATGCATCACCTTGGAAGAGCTGGCTGCGGTGACTCGTTCTCTTGGCCTTGAGCCGACCGATCAGGAGCTCAACGACATGATGAGGGAAGTTGATACAGATGGCAATGGGATCATAGATTTTCAGGAGTTCCTGAGCCTCATTGCCAGGAAGATGAAGGATGGGGATGGCGACGAAGAGCTGAAAGAAGCTTTCGAGGTCCTAGACAAGGATCAGAATGGTTTTATCTCCCCAACTGAGCTGAGGACAGTGATGACCAATCTTGGGGAGAAGATGACAGACGAGGAGGTTGAGCAGATGATAAGGGAGGCGGATACCGATGGCGACGGGCAGGTGAACTACGATGAATTTGTGATAATGATGAAAAACGCTGAACGGAAGATATCTGGGTGAAAAGATGCCGTTCATAGATCATAAGTGTGAACCACTGATCCCCAAATTTGGGAGCATCTTTTCCACTGTAAATTCCATTCTCTCAATTACTGTATTTGAACCACAAAATTTGGACTTCAGCTATGGGTAATTGCAGCTTGTAAGATTGTGATTTAAAACT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8960#0 TTTCCCATGGTAGGATACTTCCACCCAGCTTCCCTCCTCTCACCCTTATATAAAGTTCTT 60
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 GCTGCTGTGACTCTGCTTTGCTTGCTTCTTCACCCAACTACCACCACCTCTGTGTTTTCC 120
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 TGCACTCTCCTTGCTAGTGGTGTGACTGTGAAGGTGGCGGAGCCTGCATGGAAGGGCTGA 180
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 CGAGCGAGCAGATGGTGGCGTTCCAGGAGGCGTTCTTGCTCTTCGACAAGAACGGCGATG 240
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 GTTAGTTTCAACTCTCCTCTTGCCTTCCTTCCTTTTGGTTTCAGCGTTTGCTGAGATTGT 300
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 TGTTCGTTTGCATTTCTTGGTTATAGCTGTGATGATTTTGGAAGCAATGTTAGGAGTTTC 360
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 AGAGTAATTGGTCTTGGGGAATCTTGTTTTGTTGTTTATGTCAACTGTTGATGATAGGAG 420
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 GATAGAGCATGGAGGGAGAAAAGTAAAGGGTTCTTGTCTGAACTGTTCAACTTGTCGCTT 480
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 AGAACTTTCTATTGCATCCTACTTGCTGAGACATTTTTTTCCTCGAAAACTCCTCGGTGT 540
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 AAAGAAGGCTGACCTTATCTGAATCGTTACTTTTTTTCAATAATGATCTAAATCATTTAG 600
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 ATGGTTCAGGAATTTTTTATATATATGTATTACATCTTGTTTTAATTTGTGTGCTGGAGC 660
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 TGTAGATGGAATTGGAATTTCTGTGTTCTTAGGAAACGTTTCCCTGAAGTTTCTACGCTG 720
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 CCCAATGACAGGGATTTGCTTGCTGCACGACTAGTTTGAGAGCTTCCTTTGGTCAAAGAA 780
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 TCATTCAGTTTGTGACAGAAAGGTGCTTGTTATTGGCTCACTCGTTTTCTTGACTAGTGA 840
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 GGGCCCTTTAATCTTTGCAATGTGTAACCTACCTAATTTGTTTAGAAAAAGTTGTTGAGA 900
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 CATGCTTATCTAGTGGTCAAGTTCCTTAAGTAATCCGTAATATGTCCTCCAAAACTGCTT 960
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 TTCTGATATTTGTGCTACCACTACTTGCCATTAACTCTATGATATACACATAGTTATTAT 1020
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 TAAATAGTAGTTAAACCATTCATTGGCCCTTGACGTCTCTATCTTGGTCAATGATTCTGA 1080
consensus_8960#2 ----------TAAACCCATTCATTGGCCCTTGACGTCTCTATCTTGGTCAATGATTCTGA 50
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 CCGTGTTTTGCACATGGTGTGGTCTTGGTCTTCGTTTTGGATATGCACAAAAACCTACTA 1140
consensus_8960#2 CCGTGTTTTGCACATGGTGTGGTCTTGGTCTTCGTTTTGGATATGCACAAAAACCTACTA 110
consensus_8960#1 --------------------------------------------GAGTAGAAAGCTTCTT 16
* * *** ** **
consensus_8960#0 TGTGCTAGTAAGCAAATAGCAATAGCATTGGAGGCATGTTTTCACGGCTATTATCTTCAG 1200
consensus_8960#2 TGTGCTAGTAAGCAAATAGCAATAGCATTGGAGGCATGTTTTCACGGCTATTATCTTCAG 170
consensus_8960#1 CACCCAACTA--CCACCACCTCTGTGTTTTCCTGCA--CTCTCCTTGCTAGTGGTGTGAC 72
* * ** * * * * * ** *** * ** **** * * *
consensus_8960#0 TTACACAACAATGAAATCCTGCTAATATTTACAGCCTTCAGGTCTATGCGTCTATGATAT 1260
consensus_8960#2 TTACACAACAATGAAATCCTGCTAATATTTACAGCCTTCAGGTCTATGCGTCTATGATAT 230
consensus_8960#1 TGTGAAGGTGGCGGAG-CCTGC----ATGGAAGGGCTGACGAGCGAGCAGATGGTGGCGT 127
* * * * ***** ** * * ** * * * * ** *
consensus_8960#0 CCTAATTGACATTTGATATTGGAACCTTTGTCATATATGTAG---GATGCATCACCTTGG 1317
consensus_8960#2 CCTAATTGACATTTGATATTGGAACCTTTGTCATATATGTAG---GATGCATCACCTTGG 287
consensus_8960#1 TCCAGGAGGCGTTC----TTGC--TCTTCGACAAGAACGGCGATGGATGCATCACCTTGG 181
* * * * ** *** *** * ** * * * ***************
consensus_8960#0 AAGAGCTGGCTGCGGTGACTCGTTCTCTTGGCCTTGAGCCGACCGATCAGGAGCTCAACG 1377
consensus_8960#2 AAGAGCTGGCTGCGGTGACTCGTTCTCTTGGCCTTGAGCCGACCGATCAGGAGCTCAACG 347
consensus_8960#1 AAGAGCTGGCTGCGGTGACTCGTTCTCTTGGCCTTGAGCCGACCGATCAGGAGCTCAACG 241
************************************************************
consensus_8960#0 ACATGATGAGGGAAGTTGATACAGATGGCAATGGGATCATAGATTTTCAGGAGTTCCTGA 1437
consensus_8960#2 ACATGATGAGGGAAGTTGATACAGATGGCAATGGGATCATAGATTTTCAGGAGTTCCTGA 407
consensus_8960#1 ACATGATGAGGGAAGTTGATACAGATGGCAATGGGATCATAGATTTTCAGGAGTTCCTGA 301
************************************************************
consensus_8960#0 GCCTCATTGCCAGGAAGATGAAGGTGAAGCTTGAACTTTGATGGATACTTTAATTTGATG 1497
consensus_8960#2 GCCTCATTGCCAGGAAGATGAAGG------------------------------------ 431
consensus_8960#1 GCCTCATTGCCAGGAAGATGAAGG------------------------------------ 325
************************
consensus_8960#0 ATCTACAGTATCTGTTTCCCCTTTGCCAAACTAGATTTCCAATATCTGTCTCTGCAATTG 1557
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 CATTCCATGCGTATCGCAGGATGGGGATGGCGACGAAGAGCTGAAAGAAGCTTTCGAGGT 1617
consensus_8960#2 --------------------ATGGGGATGGCGACGAAGAGCTGAAAGAAGCTTTCGAGGT 471
consensus_8960#1 --------------------ATGGGGATGGCGACGAAGAGCTGAAAGAAGCTTTCGAGGT 365
****************************************
consensus_8960#0 CCTAGACAAGGATCAGAATGGTTTTATCTCCCCAACTGAGGTGGTTTAGTACCTCAAGCA 1677
consensus_8960#2 CCTAGACAAGGATCAGAATGGTTTTATCTCCCCAACTGAG-------------------- 511
consensus_8960#1 CCTAGACAAGGATCAGAATGGTTTTATCTCCCCAACTGAG-------------------- 405
****************************************
consensus_8960#0 GTTCAGACCATTAATTTTCAAGCTGTTATCCATCATTTCTGACCATGTTCTTGTTCATGT 1737
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 ------------------------------------------------------------
consensus_8960#0 GTGCAGCTGAGGACAGTGATGACCAATCTTGGGGAGAAGATGACAGACGAGGAGGTTGAG 1797
consensus_8960#2 ------CTGAGGACAGTGATGACCAATCTTGGGGAGAAGATGACAGACGAGGAGGTTGAG 565
consensus_8960#1 ------CTGAGGACAGTGATGACCAATCTTGGGGAGAAGATGACAGACGAGGAGGTTGAG 459
******************************************************
consensus_8960#0 CAGATGATAAGGGAGGCGGATACCGATGGCGACGGGCAGGTGAACTACGATGAATTTGTG 1857
consensus_8960#2 CAGATGATAAGGGAGGCGGATACCGATGGCGACGGGCAGGTGAACTACGATGAATTTGTG 625
consensus_8960#1 CAGATGATAAGGGAGGCGGATACCGATGGCGACGGGCAGGTGAACTACGATGAATTTGTG 519
************************************************************
consensus_8960#0 ATAATGATGAAAAACGCTGAACGGAAGATATCTGGGTGAAAAGATGCCGTTCATAGATCA 1917
consensus_8960#2 ATAATGATGAAAAACGCTGAACGGAAGATATCTGGGTGAAAAGATGCCGTTCATAGATCA 685
consensus_8960#1 ATAATGATGAAAAACGCTGAACGGAAGATATCTGGGTGAAAAGATGCCGTTCATAGATCA 579
************************************************************
consensus_8960#0 TAAGTGTGAACCACTGATCCCCAAATTTGGGAGCATCTTTTCCACTGTAAATTCCATTCT 1977
consensus_8960#2 TAAGTGTGAACCACTGATCCCCAAATTTGGGAGCATCTTTTCCACTGTAAATTCCATTCT 745
consensus_8960#1 TAAGTGTGAACCACTGATCCCCAAATTTGGGAGCATCTTTTCCACTGTAAATTCCATTCT 639
************************************************************
consensus_8960#0 CTCAATTACTGTATTTGAACCACAAAATTTGGACTTCAGCTATGGGTAATTGCAGCTTGT 2037
consensus_8960#2 CTCAATTACTGTATTTGAACCACAAAATTTGGACTTCAGCTATGGGTAATTGCAGCTTGT 805
consensus_8960#1 CTCAATTACTGTATTTGAACCACAAAATTTGGACTTCAGCTATGGGTAATTGCAGCTTGT 699
************************************************************
consensus_8960#0 AAGATTGTGATTTAAAACTATACTAAGGTTGTGGTTTTATTTCAAAAGTTGTTCGCTTTT 2097
consensus_8960#2 AAGATTGTGATTTAAAACT----------------------------------------- 824
consensus_8960#1 AAGATTGTGATTTAAAACTATACTAAGGTTGTGGTTTTATTTCAAAAGTTGTTCGCTTTT 759
*******************
consensus_8960#0 GCGAACTATGTATTAGAAATTGACATATACTTAG-------------------------- 2131
consensus_8960#2 ------------------------------------------------------------
consensus_8960#1 GCGAACTATGTATTAGAAATTGACATATACTTAGAAGGGCGTCTATCCATGTTTTTTATT 819
consensus_8960#0 --------------
consensus_8960#2 --------------
consensus_8960#1 TTTTTTTGGGAATT 833
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||