cluster # 8971

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Oryza sativa
cluster # 8971 cluster # 8971 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8971#0 length = 297 sequences # 6

consensusID : consensus_8971#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 297
fasta sequence

                              [NCCGTTAAGCAGAAAAGATAANTCTTCCCGANGCCCCCGCCGNCGTCTCCGNACTTCCTAACGTCGCCGTNAACCGCCACGTCCCGGCTCGNNAAATCTTAACCCGATTTCCTTTCGGGGNNANGCGCGTGGTCGCGCTCTCTGCCGNNGTTACCCCGTCCCTTNNGATCGGCTTANCCATGTGCAAGTGCCGTTNACATGGAACCTTTCTCCTCTTCGNNCTTCAAAGTTCTNATTTGAATATTTGCTACTACCACCAAGATCTGCACCGANNGCCCTCCNNCCCNGCTCGCGCCC]

[+] EMBL AU181119             [NCCGTTAAGCAGAAAAGATAANTCTTCCCGANGCCCCCGCCGNCGTCTCCGNACTTCCTAACGTCGCCGTNAACCGCCACGTCCCGGCTCGNNAAATCTTAACCCGATTNCCTTTCGGGGNNANGCGCGTGGTCGCGCTCTCTGCCGNNGTTACCCCGTCCCTTNNGATCGGCTTANCCATGTGCAAGTGCCGTTNACATGGAACCTTTCTCCTCTTCGNNCTTCAAAGTTCTNANTTGAATATTTGCTACTACCACCAAGATCTGCACCGANNGCCCTCCANCCCNGCTCGCGCCC]
[+] EMBL AU163182             [                   AACTCTTCCCGAGGCCCCCGCCGNCGTCTCCGGACTTCCTAACGTCGCCGTNAACCGCCACGTCCCGGCTCGNNAAATCTTAACCCGATTTCCTTTCGGGGNNANGCGCGTGGTCGCGCTCTCTGCCGNNGTTACCCCGTCCCTTNNGATCGGCTTACCNATGTGCAAGTGCCGTTNACATGNAACCTTTCTCCTCTTCGNNCTTCAAAGTTCTNATTTGAATATTTGCTACTACCACCAAGATCTGCACCGANNGCCCTCCGNCCNNGCTCGCGCCC]
[+] EMBL AU161538             [                                      GCCGGCGTCTCCGNACTTCCTANCGTCGCCGTNAACCGCCACGTCCCGGCTCGNNAAATNTTAACCCGATTTCCTTTCGGGGNCANGCGCGTGGTCGCGCTCTCTGCCGNNGTTACCCCGTCCCTTNNGATCGGCTTACCCATGTGCAAGTGCCGTTNACATGGNACCTTTCTCCTCTTCGNNCTTCAAAGTTCTNATTTGAATATTTGCTACTACCACCAAGATCTGCACCGANGGCCCTCCNNCCC GCTCGCGCCC]
[+] EMBL AU163175             [                                                    ACTTCCTAACGTCGCCGTNAACCGCCACGTTCCGGCTCGGNAAATCTTAACCCGATTTCCTTTCGGGGNNANGCGCGTGGTCGCGCTCTCTGCCGNNGTTACCCCGTCCCTTANGATCGGCTTANCNATGTGNAAGTGCCGTTNACATGGAACCTTTCTCCTCTTCGNNCTTCAAAGTTCTNATTTGAATATTTGCTACTACCACCAAGATCTGCACCGANGGCCNTCCNNCCCNGCTCGCGCCC]
[+] EMBL AU163178             [                                                             CGTCGCCGTTAACCGCCACGTCCCGGCTCGNNAAATNTTAACCCGATTTCCTTTCGGGGNNANGCGCGTGGTCGCGCTCTCTGCCGNNGTTACCCCGTCCCTTNNGATCGGCTTANCCATGTGCAAGTGCCGTTCACATGGANNCTTTCTCCTCTTCGNNCTTCAAAGTTCTNATTTGAATATTTGCTACTACCACCAAGATCTGCACCGANNGCCCTCCNNCCNNGCTCGCGCCC]
[+] EMBL AU197485             [                                                                       AACCGCCACGTCCCGGCTCGNNAAATNTTAACCCGATTNCCTTTCGGGGNNACGCGCGTGGTCGCGCTCTCTGCCGNNGTTACCCCGTCCCTTNNGATCGGCTTACCCATGTGCAAGTGCCGTTCACATGNAACCTTTCTCCTCTTCGNNCTTCAAAGTTCTNATTTGAATATTTGCTACTACCACCAAGATCTGCACCGANNGCCCTCCGNCCC GCTCGCGCCC]




>consensus_8971#0
NCCGTTAAGCAGAAAAGATAANTCTTCCCGANGCCCCCGCCGNCGTCTCCGNACTTCCTA
ACGTCGCCGTNAACCGCCACGTCCCGGCTCGNNAAATCTTAACCCGATTTCCTTTCGGGG
NNANGCGCGTGGTCGCGCTCTCTGCCGNNGTTACCCCGTCCCTTNNGATCGGCTTANCCA
TGTGCAAGTGCCGTTNACATGGAACCTTTCTCCTCTTCGNNCTTCAAAGTTCTNATTTGA
ATATTTGCTACTACCACCAAGATCTGCACCGANNGCCCTCCNNCCCNGCTCGCGCCC

clustalw multiple alignements is not computed in this case