cluster # 8975

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Oryza sativa
cluster # 8975 cluster # 8975 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8975#0 length = 2158 sequences # 6
consensusID : consensus_8975#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2158
fasta sequence
                              [CAGGAATTCCCGGGTCAGACACCACAGCGTCCAGGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCACATTGGAGGGCAAGTCTGGTGCACAGCAGCCGCGGTAATTCCAGCTCACAATGAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACATTGGGCCGGCCGCCAGGTCCAGCACTCACGGCAGAGCACCGACACTGCTCGACCACTTCTGCACGGCAGATGCGCTCCATGGCCTTAACTGGCCAGGGTCGTGCACTCCGGCCCGTTACTTTGAAGAAATTAGAGTGAATCAAAGCAAGCCATCAGCTCTGGATACATTTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAACATTTGCCAAGGATGTTTTCATTAATCAAAAACGAAAGTTGGGGGCTCGAAGACGATCAGATCTTGGACGCTGATTACTACAGGAGGCGGCGGCGGGTAGAAAAGGAAGATGGGATGAATTTTATTGAATCTATCTTTTCATTTGTATTTGGAGATGGTGATCCAAATGATGGTCTTGAAGATAAGAGGTGGAAGATGATTGGGCAATATATTTCATCGAATGGTGGAGTTGTCACGGCAGAAGAACTAGCACCGTATCTTGATGTGCCACCAATTTCAGAACAATCCAAGGATGATGAATCATTTATTCTTCCAGTTCTATTACGCTTCCAGGGACACCCAGAAGTTGATGAACAGGGAAACATTCTTTATAGGTTTCCATCACTGCAACGTACTGCTTCATCAAAAGGAAGTGGGGTTAGAGAATATGTTGGTAACAAATGGTCTGCTATGTTTAGCAGTGTTGAAAAGTACTTAGAGGAGAAACCATGGAAATTCAGCAAAGCAAATGCATCTGAAAGGGCAATGGTTGCTGGTTTGGGAGGACTCAATCTTTTTGGTGTGATCATTCTTGGGAACCTGTTGAAGCAAATGACAGTGCCACCTGGTGGACTTATCTCATTTGTTGCGCAACTGTTTCCTTTGCTTCAGGTATATGCTGGTTCCTTTTTTGCAATACCGTTGTTTAGATGGTTTCTACTCCGCAAGACCAACAATGACATTGAAAGGAGGAACAAGGCCAGAGAACAGCGAGCTCAGGAACTTGCATTGCCAGAATCTTCTCTCAGAAGAAAGTTACTCAGTGCACGCGACATGGCTCAACGTAAGGTAATTACTCCAGAGGAGATCGTCTACACTACCGAAAAGGATCTTTTGGATCAGGATTATGAAGTCAAGGAATGGGAAAAGAGATTTAAGGAGCTTGAATCAGACTGATGGAAATACTTGGCTTTCATGCTATCCCTTCATGGTCCTTTGGTCTGCTTGGATGGTCATTTTTATCAGCATCCAATTGAT-TGG-TGGATATATCTGACTAAACCATTAAATCAAGTGGCGCAACGTCTAACTGGACTGGATGGTTCTGACACCCATTGATAGGCGCGCACTATTTCGACCTTGAAATTTTTGTGTAAACTGTTAGTCAATTTGCATTGATCAAGGTCTGCAGCTGATGTACATATCTGTAACGTTTAGCAGCATATTTGTATAGGTAGTTCAGTGCACAGGAGCAGTGAACCACAAAGTTCAGAATTCGACATGGGTACCAGGGACCATTCTTTATGGATGGAGAAGGATAGCCGGAAAAGTAAAAGATTATGCCATTACTGGGGCACCAGACTTGGTCATTCTGGTTTCTGTATCGCTGAAACTTTACTGGTGATCATGCACAAGTCTTATGCTTTACACAGGCATGTTAGAACATTCAGGGGAAAATCAATTCCTGATTGGTGAGAAACAGTAATTGTGTATAGGAGCTGTGCAAGAATATACGTCCAGATTCCAGACCTTAGATGCCAGAATAGAACAAGATCATTTATAAATCCCAAAAGAATGTGATACGCTTACAACTGATGATTTGCTATGTATTATCGACCAATGACAATTCTTCTGTATGACTCTTCCTCTGTAACACTGTAAGACGAAAGGCAGTGCAAGCCTGGTGGGTT]

[+] EMBL BI800174             [CAGGAATTCCCGGGTCAGACACCACAGCGTCCAGGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCACATTGGAGGGCAAGTCTGGTGCACAGCAGCCGCGGTAATTCCAGCTCACAATGAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACATTGGGCCGGCCGCCAGGTCCAGCACTCACGGCAGAGCACCGACACTGCTCGACCACTTCTGCACGGCAGATGCGCTCCATGGCCTTAACTGGCCAGGGTCGTGCACTCCGGCCCGTTACTTTGAAGAAATTAGAGTGAATCAAAGCAAGCCATCAGCTCTGGATACATTTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAACATTTGCCAAGGATGTTTTCATTAATCAAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK060846             [                                                                                                                                                                                                                                                                                                                                                              GGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATCTTGGACGCTGATTACTACAGGAGGCGGCGGCGGGTAGAAAAGGAAGATGGGATGAATTTTATTGAATCTATCTTTTCATTTGTATTTGGAGATGGTGATCCAAATGATGGTCTTGAAGATAAGAGGTGGAAGATGATTGGGCAATATATTTCATCGAATGGTGGAGTTGTCACGGCAGAAGAACTAGCACCGTATCTTGATGTGCCACCAATTTCAGAACAATCCAAGGATGATGAATCATTTATTCTTCCAGTTCTATTACGCTTCCAGGGACACCCAGAAGTTGATGAACAGGGAAACATTCTTTATAGGTTTCCATCACTGCAACGTACTGCTTCATCAAAAGGAAGTGGGGTTAGAGAATATGTTGGTAACAAATGGTCTGCTATGTTTAGCAGTGTTGAAAAGTACTTAGAGGAGAAACCATGGAAATTCAGCAAAGCAAATGCATCTGAAAGGGCAATGGTTGCTGGTTTGGGAGGACTCAATCTTTTTGGTGTGATCATTCTTGGGAACCTGTTGAAGCAAATGACAGTGCCACCTGGTGGACTTATCTCATTTGTTGCGCAACTGTTTCCTTTGCTTCAGGTATATGCTGGTTCCTTTTTTGCAATACCGTTGTTTAGATGGTTTCTACTCCGCAAGACCAACAATGACATTGAAAGGAGGAACAAGGCCAGAGAACAGCGAGCTCAGGAACTTGCATTGCCAGAATCTTCTCTCAGAAGAAAGTTACTCAGTGCACGCGACATGGCTCAACGTAAGGTAATTACTCCAGAGGAGATCGTCTACACTACCGAAAAGGATCTTTTGGATCAGGATTATGAAGTCAAGGAATGGGAAAAGAGATTTAAGGAGCTTGAATCAGACTGATGGAAATACTTGGCTTTCATGCTATCCCTTCATGGTCCTTTGGTCTGCTTGGATGGTCATTTTTATCAGCATCCAATTGAT TGG TGGATATATCTGACTAAACCATTAAATCAAGTGGCGCAACGTCTAACTGGACTGGATGGTTCTGACACCCATTGATAGGCGCGCACTATTTCGACCTTGAAATTTTTGTGTAAACTGTTAGTCAATTTGCATTGATCAAGGTCTGCAGCTGATGTACATATCTGTAACGTTTAGCAGCATATTTGTATAGGTAGTTCAGTGCACAGGAGCAGTGAACCACAAAGTTCAGAATTCGACATGGGTACCAGGGACCATTCTTTATGGATGGAGAAGGATAGCCGGAAAAGTAAAAGATTATGCCATTACTGGGGCACCAGACTTGGTCATTCTGGTTTCTGTATCGCTGAAACTTTACTGGTGATCATGCACAAGTCTTATGCTTTACACAGGCATGTTAGAACATTCAGGGGAAAATCAATTCCTGATTGGTGAGAAACAGTAATTGTGTATAGGAGCTGTGCAAGAATATACGTCCAGATTCCAGACCTTAGATGCCAGAATAGAACAAGATCATTTATAAATCCCAAAAGAATGTGATACGCTTACAACTGATGATTTGCTATGTATTATCGACCAATGACAATTCTTCTGTATGACTCTTCCTCTGTAACACTGTAAGACGAAAGGCAGTGCAAGCCTGGTGGGTT]
[+] EMBL CA764767             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGCACCGTATCTTGATGTGCCACCAATTTNAGAACAATCCAAGGATGATGAATC TTTATTCTTCCAGTTCTATTACGCTTCCAGGGACACCCAGAAGTTGATGAACAGGGAAACATTCTTTATAGGTTTCCATCACTGCAACGTACTGCTTCATCAAAAGGAAGTGGGGTTAGAGAATATGTTGGTAACAAATGGTCTGCCATGTTTAGCAGTGTTGAAAAGTACTTAGAGGAGAAACCATGGAAATTCAGCAAAGCAAATGCATCTGAAAGGGCAATGGTTGCTGGTTTGGGAGGACTCAATCTTTTTGGTGTGATCATTCTTGGGAACCTGTTGAAGCAAATGACAGTGCCACCTGGTGGACCTATCTCATTTGTTGCGCAACTGTTTCCTTTGCTTCAGGTATATGCTGGTTCCTTTTTTGCAATACCGTTGTTTAGATGGTTTCTACTCCGCAAGACCAACAATGACATTGAAAGGAGGAACAAGGCCAGAGAACAGCGAGCTCAGGAACTTGCATTGCCAGAATCTTCTCTCAGAAGAAAGTTACTCAGTGCACGCGACATGGCTCAACGTAAGGTAATTACTCCAGAGGAGATCGTCTACACTACCGAAAAGGATCTTTTGGATCAGGATTATGAAGTCAAGGAATGGGAAAAGAGATTTAAGGAGCTTGAATCAGACTGATGGAAATACTTGGCTTTCATGCTATCCCTTCATGGTCCTTTGGTCTGCTTGGATGGTCATTTTTATCAGCATCCAATTGAT TGG TGGATATATCTGACTAAACCATTAAATCAAGTGGCGCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB000786             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gcAAGCAAATGCATCTGAAAGGGCAATGGTTGCTGGTTTGGGAGGACTCAATCTTTTTGGTGTGATCGTTCTTGGGAACCTGGTGAAGCAAATGACAGTGCCACCTGGTGGACTTATCTCATTTGTTGCGCAACTGTTTCCTTTGCTTCAGGTATATGCTGGTTCCTTTTTTGCAATACCGTTGTTTAGATGGTTTCTACTCCGCAAGACCAACAATGACATTGAAAGGAGGAACAAGGCCAGAGAACAGCGAGCTCAGGAACTTGCATTGCCAGAATCTTCTCTCAGAAGAAAGTTACTCAGTGCACGCGACATGGCTCAACGTAAGGTAATTACTCCAGAGGAGATCGTCTACACTACCGAAAAGGATCTTTTGGATCACGATTATGAAGTCAAGGAATGGGAAAAGAGATTTAAGGAGCTTGAATCAGACTGATGGAAATACTTGGCTTTCATGCTATCCCTTCATGGTCCTTTGGTCTGCTTGGATGGTCATTTTTATCAGCATCCAATTGAT TGG TGGATATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AA749891             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTTGCTGGTTTGGGAGGACACAATCTTTTTGGTGAGATCATTCTTGGGAACCTGTTGAAGCAAATGAGAATGCCACCTGGT GACTTATCTCATTTGTTGCGCAACTGTTTCCTTTGCTTCAGGTATATGCTGGTTCCTTTTTTGCAATACCGTTGTTTAGATGGTTTCTACT CACAAGACCAACAATGACATTGAAAGGAGGAACAAGGCCAGAGAtagcag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU101809             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GGAATGGGAAAAGAGATTTAAGGAGCTTGAATCAGACTGATGGAAATACTTGGCTTTCATGCTATCCCTTCATGGTCCTTTGGTCTGCTTGGATGGTCATTTTTATCAGCATCCAATTGATNTGGNTGGATATATCTGACTAAACCATTAAATCAAGTGGCGCAACGTCTAACTGGACTGGATGGTTCTGACACCCATTGATAGGCGCGCACTATTTCGACCTTGAAATTTTTGTGTAAACTGTTAGTCAATTTGCATTGATCAAGGTCTGCAGCTGATGTACATATCTGTAACGTTTAGCAGCATATTTGTATAGGTAGTTCAGTGCACAGGAGCAGTGAACCACAAAGTTCAGAATTCGACATGGGTACCAGGGACCATTCTTTATGGATGGAGAAGGATAGCCGGAAAAGTAAAAGATTATGCCATTACTGGGGCATCAGACTTGGTCAaa                                                                                                                                                                                                                                                                                                                               ]




>consensus_8975#0
CAGGAATTCCCGGGTCAGACACCACAGCGTCCAGGGTAATTGGAATGAGTACAATCTAAA
TCCCTTAACGAGGATCACATTGGAGGGCAAGTCTGGTGCACAGCAGCCGCGGTAATTCCA
GCTCACAATGAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACATTGGG
CCGGCCGCCAGGTCCAGCACTCACGGCAGAGCACCGACACTGCTCGACCACTTCTGCACG
GCAGATGCGCTCCATGGCCTTAACTGGCCAGGGTCGTGCACTCCGGCCCGTTACTTTGAA
GAAATTAGAGTGAATCAAAGCAAGCCATCAGCTCTGGATACATTTAGCATGGGATAACAT
CATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACA
GTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAAC
AACTGCGAAAACATTTGCCAAGGATGTTTTCATTAATCAAAAACGAAAGTTGGGGGCTCG
AAGACGATCAGATCTTGGACGCTGATTACTACAGGAGGCGGCGGCGGGTAGAAAAGGAAG
ATGGGATGAATTTTATTGAATCTATCTTTTCATTTGTATTTGGAGATGGTGATCCAAATG
ATGGTCTTGAAGATAAGAGGTGGAAGATGATTGGGCAATATATTTCATCGAATGGTGGAG
TTGTCACGGCAGAAGAACTAGCACCGTATCTTGATGTGCCACCAATTTCAGAACAATCCA
AGGATGATGAATCATTTATTCTTCCAGTTCTATTACGCTTCCAGGGACACCCAGAAGTTG
ATGAACAGGGAAACATTCTTTATAGGTTTCCATCACTGCAACGTACTGCTTCATCAAAAG
GAAGTGGGGTTAGAGAATATGTTGGTAACAAATGGTCTGCTATGTTTAGCAGTGTTGAAA
AGTACTTAGAGGAGAAACCATGGAAATTCAGCAAAGCAAATGCATCTGAAAGGGCAATGG
TTGCTGGTTTGGGAGGACTCAATCTTTTTGGTGTGATCATTCTTGGGAACCTGTTGAAGC
AAATGACAGTGCCACCTGGTGGACTTATCTCATTTGTTGCGCAACTGTTTCCTTTGCTTC
AGGTATATGCTGGTTCCTTTTTTGCAATACCGTTGTTTAGATGGTTTCTACTCCGCAAGA
CCAACAATGACATTGAAAGGAGGAACAAGGCCAGAGAACAGCGAGCTCAGGAACTTGCAT
TGCCAGAATCTTCTCTCAGAAGAAAGTTACTCAGTGCACGCGACATGGCTCAACGTAAGG
TAATTACTCCAGAGGAGATCGTCTACACTACCGAAAAGGATCTTTTGGATCAGGATTATG
AAGTCAAGGAATGGGAAAAGAGATTTAAGGAGCTTGAATCAGACTGATGGAAATACTTGG
CTTTCATGCTATCCCTTCATGGTCCTTTGGTCTGCTTGGATGGTCATTTTTATCAGCATC
CAATTGATTGGTGGATATATCTGACTAAACCATTAAATCAAGTGGCGCAACGTCTAACTG
GACTGGATGGTTCTGACACCCATTGATAGGCGCGCACTATTTCGACCTTGAAATTTTTGT
GTAAACTGTTAGTCAATTTGCATTGATCAAGGTCTGCAGCTGATGTACATATCTGTAACG
TTTAGCAGCATATTTGTATAGGTAGTTCAGTGCACAGGAGCAGTGAACCACAAAGTTCAG
AATTCGACATGGGTACCAGGGACCATTCTTTATGGATGGAGAAGGATAGCCGGAAAAGTA
AAAGATTATGCCATTACTGGGGCACCAGACTTGGTCATTCTGGTTTCTGTATCGCTGAAA
CTTTACTGGTGATCATGCACAAGTCTTATGCTTTACACAGGCATGTTAGAACATTCAGGG
GAAAATCAATTCCTGATTGGTGAGAAACAGTAATTGTGTATAGGAGCTGTGCAAGAATAT
ACGTCCAGATTCCAGACCTTAGATGCCAGAATAGAACAAGATCATTTATAAATCCCAAAA
GAATGTGATACGCTTACAACTGATGATTTGCTATGTATTATCGACCAATGACAATTCTTC
TGTATGACTCTTCCTCTGTAACACTGTAAGACGAAAGGCAGTGCAAGCCTGGTGGGTT
clustalw multiple alignements is not computed in this case