cluster # 8976

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Oryza sativa
cluster # 8976 cluster # 8976 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8976#0 length = 946 sequences # 6
consensusID : consensus_8976#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 946
fasta sequence
                              [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATAGCCGGAGCTTTCATAGATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTCTTACATCAAGTCAGA-GAGAGATCAGGTGAA-ACAAAAACAAAAGCAGAGCACGGC-CGGTAAAATCAAAAGACGATGAACAAACTGGGAACACACGAAACAAGGTGGGAGACATCATCCGATCCGAAATGAACCATTAAACCAAGGTTTTTTTTAAGAATAACGGTTTAGTGGCCACCAGACTCCTCGCAGCCCGGGGGCTTGTAGGCGATGAAGCTGATGAGCTGCACC-TGCCTGACGTTGTCGAAGCCGATGATACGGACGAATGCATCAGGGTACGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGCGTCAGTGCACCCG-AACATGGGCAGCTTCCACATGGTCCAGTACCTGCCATCGTAGTATCCGGGGGATCTGTGGTTCTCACGGTAGACGAATCCGACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAACGGAGCAGGTACTCGATCTGCTTCAGGAGGTCCTCCACGGTGAGCGGTGGCAGGTAGGAGAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGCATGCACCTGATCCTGCCG-CCATTGCTGACGTTGCCGAAGCTGGAGTTGCCGGAGCGGCGGGCGAAGGGGCATGCCGGCGGTGGACTTGAGCCCTTGGAATGGAGCCACGGAGGTGGCCGAGGAGGCCATCACGGTGGGGGCCATAGCCACGTAGTTAGTTAGCTAGCTTACTGGCTAGTAGTAGTAGAGTATGTCCAGTAGCAGTGCTGTTGAGTTTCTACTCCTCAGTCCATG]

[-] EMBL CF335427             [TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATAGCCGGAGCTTCCATATATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTCTTACATCAAGTCAGA GAGAGATCAGGTGAA ACAAAAACAAAAGCAGAGCACGGC CGGTAAAATCAAAAGACGATGAACAAACTGGGAACACACGAAACAAGGTGGGAGACATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB965254             [                                                                                       TATATAGCCGGAGCTTTCATAGATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTCTTACATCAAGTCAGA GAGAGATCAGGTGAA ACAAAAACAAAAGCAGAGCACGGC CGGTAAAATCAAAAGACGATGAACAAACTGGGAACACACGAAACAAGGTGGGAGACATCCTCCGATCCGAAATGAACCATTAAACCAAGGTTTTTTTTAAGAATAACGGTTTAGTGGCCACCAGACTCCTCGCAGCCCGGGGGCTTGTAGGCGATGAAGCTGATGAGCTGCACCTTGCCTAACGTGGTCGAAGCCGATGATACGGACGAATGCATCAGGGTACGCCTTCTGGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGCGTCGGTGCACCCG AACATGGGCAGCTTCCACATGGTCCAGTACCTGCCGTCGTAGTATCCAGGGGACCTGTGGTTCTCACGGTAGACAAATCCGACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAACGGAGCAGGTACTCGATCTGCTTCAGGAGGTCCTCCACGGTGAGCGGTGGCAGGTAGGAGAGGGTCTCGAACTTCTTGATGCCCTCAATCGGGCACACCTGCATGCACCTGATCCTGCCGACAATTGCTGACGTTGCCGAAGCTGGAGTTGCCGGAGCGGCGGGCGAAGGGGCATG                                                                                                                                                                 ]
[+] EMBL CB967302             [                                                                                                     TTTCATAGATTTCATTCACATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTCTTACATCAAGTCAGANGAGAGATCAGGTGAANAAAAAAACAAAAGCAGAGCACGGCGCGGTAAAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF336249             [                                                                                                                                                                                                                                                                                                                                                                          GCTTGTAGGCGATGAAGCTGATGAGCTGCACC TGCCTGACGTTGTCGAAGCCGATGATACGGACGAATGCATCAGGGTACGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGCGTCAGTGCACCCG AACATGGGCAGCTTCCACATGGTCCAGTACCTGCCATCGTAGTATCCGGGGGATCTGTGGTTCTCACGGTAGACGAATCCGACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAACGGAGCAGGTACTCGATCTGCTTCAGGAGGTCCTCCACGGTGAGCGGTGGCAGGTAGGAGAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGCATGCACCTGATCCTGCCG CCATTGCTGACGTTGCCGAAGCCCGAGTTGGTGGAGCGGCGGCTGACGGGG AGCCCGGCGGTGGACTTGAGCCCTTGGAATGGAGCCACGGAGGTGGCCGAGGAGGCCATCACGGTGGGGGCCATAGCCACGTAGTTAGTTAGCTAGCTTACTGGCTAGTAGTAGTAGAGTATGTCCAGTAGCA                               ]
[-] EMBL CF317596             [                                                                                                                                                                                                                                                                                                                                                                           CTTGTAGGCGATGAAGCTGATGAGCTGCACC TGCCTGACGTTGTCGAAGCCGATGATACGGACGAATGCATCAGGGTACGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGCGTCAGTGCACCCGAAACATGGGCAGCTTCCACATGGTCCAGTACCTGCCATCGTAGTATCCGGGGGATCTGTGGTTCTCACGGTAGACGAATCCGACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAACGGAGCAGGTACTCGATCTGCTTCAGGAGGTCCTCCACGGTGAGCGGTGGCAGGTAGGAGAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGCATGCACCTGATCCTGCCG CCATTGCTGACGTTGCCGAAGCTGGAGTTGCCGGAGCGGCGGGCG ACGGGCATGCCGGCGGTGGACTTGAGCCCCTGGAAGGGAGCGACGGTGGTGGCCGAGGAGGCCATCACGGTGGGGGCCATAGCCACGTAGTTAGTTAGCTAGCTTACTGGCTAGTAGTAGTAGAGTATGTCCAGTAGCAGTGCTGTTGAGTTTCTACTCCTCAGTCCATG]
[-] EMBL CF337682             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCTTGAGCACCTGGGTGGCGTCAGTGCACCCG AACATGGGCAGCTTCCACATGGTCCAGTACCTGCCATCGTAGTATCCGGGGGATCTGTGGTTCTCACGGTAGACGAATCCGACCTTGCTGAACTCGAGGCAGGGCACCCACTTGGAACGGAGCAGGTACTCGATCTGCTTCAGGAGGTCCTCCACGGTGAGCGGTGGCAGGTAGGAGAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGCATGCACCTGATCCTGCCG CCATTGCTGACGTTGCCGAAGCTGGAGTTGCCGGAGCGGCGGGCG ACGGGCATGCCGGCGGTGGACTTGAGCCCTTGGAATGGAGCCACGGAGGTGGCCGAGGAGGCCATCACGGTGGGGGCCATAGCCACGTAGTTAGTTAGCTAGCTTACTGGCTAGTAGTAGTAGAGTATGTCCAGTAGCA                               ]




>consensus_8976#0
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTATATAGCCGGAGCTTTCATAGATTTCATTCAC
ATATGCCTCACCCAACAACATATAGTCGTAGCAGATACCACTCTTACATCAAGTCAGAGA
GAGATCAGGTGAAACAAAAACAAAAGCAGAGCACGGCCGGTAAAATCAAAAGACGATGAA
CAAACTGGGAACACACGAAACAAGGTGGGAGACATCATCCGATCCGAAATGAACCATTAA
ACCAAGGTTTTTTTTAAGAATAACGGTTTAGTGGCCACCAGACTCCTCGCAGCCCGGGGG
CTTGTAGGCGATGAAGCTGATGAGCTGCACCTGCCTGACGTTGTCGAAGCCGATGATACG
GACGAATGCATCAGGGTACGCCTTCTTGGCCTCCTCGAGCTCCTTGAGCACCTGGGTGGC
GTCAGTGCACCCGAACATGGGCAGCTTCCACATGGTCCAGTACCTGCCATCGTAGTATCC
GGGGGATCTGTGGTTCTCACGGTAGACGAATCCGACCTTGCTGAACTCGAGGCAGGGCAC
CCACTTGGAACGGAGCAGGTACTCGATCTGCTTCAGGAGGTCCTCCACGGTGAGCGGTGG
CAGGTAGGAGAGGGTCTCGAACTTCTTGATGCCCTCAATCGGCCACACCTGCATGCACCT
GATCCTGCCGCCATTGCTGACGTTGCCGAAGCTGGAGTTGCCGGAGCGGCGGGCGAAGGG
GCATGCCGGCGGTGGACTTGAGCCCTTGGAATGGAGCCACGGAGGTGGCCGAGGAGGCCA
TCACGGTGGGGGCCATAGCCACGTAGTTAGTTAGCTAGCTTACTGGCTAGTAGTAGTAGA
GTATGTCCAGTAGCAGTGCTGTTGAGTTTCTACTCCTCAGTCCATG
clustalw multiple alignements is not computed in this case