cluster # 8994

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Oryza sativa
cluster # 8994 cluster # 8994 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8994#0 length = 1122 sequences # 6
consensusID : consensus_8994#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1122
fasta sequence
                              [TGCCCTCCAAATAAAGTAAACCCGCGCGAGCCGCCACCGGTGAGGCTCCCGTCGCCGTCCGTACCCCGGCTCCCGGCGACCGCCGCCACCACCACCCAGGGTCCCCGCTTCGTAGGCGAGGGGGGAGGAGGAGACGACGCCATGGGGTTCTGGGAAGCCTTCCTCAACTGGCTCCGCAGTCTTTTTTTCAAGCAAGAGATGGAGCTTTCCTTGATAGGGCTTCAAAATGCTGGGAAAACATCGCTTGTGAATGTCATTGCTACAGGAGGCTTTAGTGAGGACATGATTCCTACTGTAGGATTCAACATGAGAAAGGTGACCAAAGGTAATGTCACAATAAAATTGTGGGATCTTGGAGGCCAGCCAAGATTCCGTAGCATGTGGGAGAGATACTGTCGTGCAGTTTCTGCAATTGTGTATGTTGTGGATGCAGCCGATCGAGAGAACATGGCTATTGCCAAAAGCGAGCTCCATGATCTTCTGAGCAAGCCTTCTTTGACTGGGATCCCATTACTAGTCATTGGCAATAAAATTGACAAACCTGAAGCTTTCCCTAAGCAAAGCTTCACAGACGTAATGGGGCTAAAGACAATCACTGACCGAGAAGTGGCATGCTTCATGATATCATGCAAGAACTCGACAAACATTGACTCTGTCATCGACTGGCTCGTGAAGCACTCAAAAAAGAAGAATTGATC-TAAATTTTTAGCTTTTGAAGTACGCAGATTCTCTCTTTTTGCATGTTGCGTAGCACTTGGCCTGTAAATTATGCAAGAGTTATTGTTGATCAGGGAGGTTGTGTTCATAATTTTGT-AACCTGCTTTGGCATTATATTGGCAGACTGCATCTGGTATTGTGCACGCATGTGCTTCCTTCCGACTTACAA-GAGGTTCCACCCTC-GTGTTGCATACTTGCTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTACTTTGGATGAAACTAAAGGGAGACAAAAATGTTGATAAATCGATGCTGCAATGAATTGCAAATTTGTGCTTGAGACTCTGAGAGTAATAATATGTAGCATGAGAGAAATATTTAAACTATGTATTTGGTTCTTTTAAGTGAATTGCATCATCCTGGGAAAAA]

[+] EMBL AK112007             [TGCCCTCCAAATAAAGTAAACCCGCGCGAGCCGCCACCGGTGAGGCTCCCGTCGCCGTCCGTACCCCGGCTCCCGGCGACCGCCGCCACCACCACCCAGGGTCCCCGCTTCGTAGGCGAGGGGGGAGGAGGAGACGACGCCATGGGGTTCTGGGAAGCCTTCCTCAACTGGCTCCGCAGTCTTTTTTTCAAGCAAGAGATGGAGCTTTCCTTGATAGGGCTTCAAAATGCTGGGAAAACATCGCTTGTGAATGTCATTGCTACAGGAGGCTTTAGTGAGGACATGATTCCTACTGTAGGATTCAACATGAGAAAGGTGACCAAAGGTAATGTCACAATAAAATTGTGGGATCTTGGAGGCCAGCCAAGATTCCGTAGCATGTGGGAGAGATACTGTCGTGCAGTTTCTGCAATTGTGTATGTTGTGGATGCAGCCGATCGAGAGAACATGGCTATTGCCAAAAGCGAGCTCCATGATCTTCTGAGCAAGCCTTCTTTGACTGGGATCCCATTACTAGTCATTGGCAATAAAATTGACAAACCTGAAGCTTTCCCTAAGCAAAGCTTCACAGACGTAATGGGGCTAAAGACAATCACTGACCGAGAAGTGGCATGCTTCATGATATCATGCAAGAACTCGACAAACATTGACTCTGTCATCGACTGGCTCGTGAAGCACTCAAAAAAGAAGAATTGATC TAAATTTTTAGCTTTTGAAGTACGCAGATTCTCTCTTTTTGCATGTTGCGTAGCACTTGGCCTGTAAATTATGCAAGAGTTATTGTTGATCAGGGAGGTTGTGTTCATAATTTTGT AACCTGCTTTGGCATTATATTGGCAGACTGCATCTGGTATTGTGCACGCATGTGCTTCCTTCCGACTTACAA GAGGTTCCACCCTC GTGTTGCATACTTGCTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTACTTTGGATGAAACTAAAGGGAGACAAAAATGTTGATAAATCGATGCTGCAATGAATTGCAAA                                                                                                    ]
[-] EMBL BE040443             [                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATGGATATTGCCAANAGCGAGCTCCATGATCTTCTGAGCAAGCCTTCTTTGACTGGGATCCCATTACTAGTCATTGGCAATAAAATTGACAAACCTGAAGCTTTCCCTAAGCAAAGCTTCACAGACGTAATGGGGCTAAAGACAATCACTGACCGAGAAGTGGCATGCTTCATGATATCATGCAAGAACTCGACAAACATTGACTCTGTCATCGACTGGCTCGTGAAGCACTCAAAAAAGAAGAATTGATC TAAATTTTTAGCTTTTGAAGTACGCAGATTCTCTCTTTTTGCATGTTGCGTAGCACTTGGCCTGTAAATTATGCAAGAGTTATTGTTGATCAGGGAGGTTGTGTTCATAATTTTGT AACCTGCTTTGGCATTATATTGGCAGACTGCATCTGGTATTGTGCACGCATGTGCTTCCTTCCGACTTACAA GAGGTTCCACCCTC GTGTTGCATACTTGCTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTACTCTGGATGA                                                                                                                                                        ]
[+] EMBL BQ908135             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAAGCTTCACAGACGTAATGGGGCTAAAGACAATCACTGACCGAGAAGTGGCATGCTTCATGATATCATGCAAGAACTCGAC AACATTGACTCTGTCATCGACTGGCTCGTGAAGCACTCAAAAAAGAAGAATTGATCGTAAATTTTTAGCTTTTGAAGTAC CAGATTCTCTCTTTTTGCATGTTGCGTAGCACTTGGCCTGTAAATTA GCAAGAGTTATTGTTGATCAGGGA GTTGTGTTCATAATTTTGTAAACCNGCTTTGGCATTATATT GCAGACTGCATCTGGTATTGTGCACGCATGTGCTTCCTTCCGACTTACAA GAGGTTCCACCCTC GTGTTGCATACTTGCTTGGTGAATTTGAAAaaaaaa                                                                                                                                                                                          ]
[+] EMBL BM414930             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    aGCTTCATTCCGACTTACAA GAGGTTCCACCCTCAGTGTTGCATACTTGGTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTACTTTGGATGAAACTAAAGGGAGACAAAAATGTTGATA                                                                                                                             ]
[+] EMBL AU165172             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCCGACTTACAAGGAGGTTCCACCCTC GTGTTGCATACTTGCTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTACTTTGGATGAAACTAAAGGGAGACAAAAATGTTGATAAATCGATGCTGCAATGAATTGCAAATTTGTGCTTGAGACTCTGAGAGTAATAATATGTAGCATGAGAGAAATATTTAAACTATGTATTTGGTTCTTTTAAGTGAATTGCATCATCCTGGGAAAAA]
[+] EMBL AU165199             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCCGACTTACAA GAGGTTCCACCCTC GTGTTGCATACTTGCTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTACTTTGGATGAAACTAAAGGGAGACAAAAATATTGATAAATCGATGCTGCAATGAATTGCAAATTTGTGCTTGAGACTCTGAGAGTAATAATATGTAGCATGAGAGAAATATTTAAACTAaaaa                                       ]




>consensus_8994#0
TGCCCTCCAAATAAAGTAAACCCGCGCGAGCCGCCACCGGTGAGGCTCCCGTCGCCGTCC
GTACCCCGGCTCCCGGCGACCGCCGCCACCACCACCCAGGGTCCCCGCTTCGTAGGCGAG
GGGGGAGGAGGAGACGACGCCATGGGGTTCTGGGAAGCCTTCCTCAACTGGCTCCGCAGT
CTTTTTTTCAAGCAAGAGATGGAGCTTTCCTTGATAGGGCTTCAAAATGCTGGGAAAACA
TCGCTTGTGAATGTCATTGCTACAGGAGGCTTTAGTGAGGACATGATTCCTACTGTAGGA
TTCAACATGAGAAAGGTGACCAAAGGTAATGTCACAATAAAATTGTGGGATCTTGGAGGC
CAGCCAAGATTCCGTAGCATGTGGGAGAGATACTGTCGTGCAGTTTCTGCAATTGTGTAT
GTTGTGGATGCAGCCGATCGAGAGAACATGGCTATTGCCAAAAGCGAGCTCCATGATCTT
CTGAGCAAGCCTTCTTTGACTGGGATCCCATTACTAGTCATTGGCAATAAAATTGACAAA
CCTGAAGCTTTCCCTAAGCAAAGCTTCACAGACGTAATGGGGCTAAAGACAATCACTGAC
CGAGAAGTGGCATGCTTCATGATATCATGCAAGAACTCGACAAACATTGACTCTGTCATC
GACTGGCTCGTGAAGCACTCAAAAAAGAAGAATTGATCTAAATTTTTAGCTTTTGAAGTA
CGCAGATTCTCTCTTTTTGCATGTTGCGTAGCACTTGGCCTGTAAATTATGCAAGAGTTA
TTGTTGATCAGGGAGGTTGTGTTCATAATTTTGTAACCTGCTTTGGCATTATATTGGCAG
ACTGCATCTGGTATTGTGCACGCATGTGCTTCCTTCCGACTTACAAGAGGTTCCACCCTC
GTGTTGCATACTTGCTTGGTGAATTTGAAATTATGCGTGATTTGTGGATCATATTGTTTA
CTTTGGATGAAACTAAAGGGAGACAAAAATGTTGATAAATCGATGCTGCAATGAATTGCA
AATTTGTGCTTGAGACTCTGAGAGTAATAATATGTAGCATGAGAGAAATATTTAAACTAT
GTATTTGGTTCTTTTAAGTGAATTGCATCATCCTGGGAAAAA
clustalw multiple alignements is not computed in this case