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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9007#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2195 fasta sequence
[ATCTTGGTTGCCCTTTTGTTTATGCCATCTTGAGCCTTGTGCCCTCGAGGCCTTGACTTCCTTCCCCTACCCCCACCCCCAACATCTCCCTGAATTTAGCTGCTTTCGCGGCACAGATCAGTGCGCAAGCCATAAAGATCGAGCCTTAGCTTCGAGCTGGAATTTATCGGCGGATCGGCTGGCATTTTTTCAGTTTGTGCGCGCGCCTCAAGCTCAAGAACCGGGAGAGAGATGAGCTGCTTCCCGTGCTCGGGGTCGTCGGGGAAGGGCGGGGTTGACGCCAAGAGCGTGGCGGCGCTCTCGCCGGGTCCGCGGCCCGCGGCGAGCGCGGCACCAGATCGATCAAACTCATCACGTGGTTCAGGCATTAAGAAGGACGATTCTGTCCGAAGAGGAGGAAGCTCTGCGAGTGATGGTCCAGCCAAAATTTTCACTTTCCGAGAATTGGCTGTTGCCACCAAGAATTTCAGAAAAGACTGCCTGCTGGGTGAAGGTGGCTTTGGTCGTGTCTATAAAGGACAGATGGAGAATGGACAGGTTATTGCCGTGAAGCAACTTGACAGAAATGGCCTACAAGGAAACCGAGAATTTCTCGTGGAGGTTCTCATGCTAAGTCTCTTGCACCATCCTAATCTGGTCAGATTAATTGGCTACTGCGCAGATGGTGACCAGCGGCTCCTAGTTTATGAGTATATGCTATTGGGGTCACTAGAAAACCATCTTCATGATCGCCCACCAGGCAAGAAACCTCTTGACTGGAATGCAAGGATGAAGATTGCTGTTGGTGCAGCGAAGGGTTTGGAGTACCTGCATGATAAGGCAAATCCACCAGTCATATATAGAGATTTCAAATCATCAAATATTCTTCTGGGCGAAGACTATTACCCAAAGCTATCTGATTTTGGGCTTGCAAAACTTGGTCCAGTTGGTGACAAAACTCACGTATCAACAAGAGTTATGGGAACATATGGCTATTGTGCTCCAGAATATGCCATGACAGGACAGTTGACAGTAAAATCTGATGTTTACAGCTTTGGCGTTGTCTTCCTTGAACTCATTACAGGACGTAAAGCCATTGATCACACCCAACCTGCAGGGGAGCAAAATCTTGTTGCATGGGCTCGTCCACTGTTTAGAGACCGAAGGAAGTTCTGCCAAATGGCCGATCCATCGCTGCAAGGTTGTTATCCCAAAAGGGGTTTGTACCAGGCTTTAGCTGTTGCATCTATGTGCTTGCAGGAGAATGCAACATCTCGACCCCTCATTGCGGATATTGTCACTGCACTTTCTTATCTAGCTTCAAATCATTACGATCCTAATGC-ACCTTCTGCAAAGAGTTCGAGGACTTGCCCATCCACCCCAAAGGCAAAAGCACATCGACGAACAACCAGTGTTCCTGATGCCCAACATGCTGCCGATTCACTTAACTGGAACTTCCCAGACTTGGGGAGGAAGGAAACTACTAGAGGGGAATTCGAG-CAGGATCACAGTGAAGGTTAT-GGCAGTGGCAGTAGCTCTGG-AAGGAATGATGGT-CTAGATGTTCCAGAACTGCTGGCCTTGCATAATGGACAAAATAACAATGAAGCTGATATATATCACAAGTCCAGTGTCAAGCTTGATGCCCATGAGAAACAGAGATCAGGGTCAGGCAAAGGCAGCAGGCAGTTTTGATGCACATACAAACAGACATTGTTGCAATTCTTTCCCCGATTGCTGCCAATTTTGCCAGACATCTTCTCTGCTTCTGTTGAGGGTTGGATACTCTTTGTTGGTACAGTTGCGCGCTGTTATGGTCCAGGTGCTGTATGACTGTACCCATGGTTGTATTTTAGTTGTTTCCAAAGGTATACATGAAGATCATGATCTGGTTGAAGCAAGAAACCATCTTGTCGCAGATAAGGAGCATGCATTTTGATCGGTGTCAATTGCATTCTACCTGTAAAGATTTTTATTCTCTTTGTAATTAGGTCACAGTTTGTGCCATACCTATCATTCAGGAATTAGGATGTTTTATACA-TACAGAAAACAATTCTTACCAGAATGCGTGTACAGACCTACATGCTACAGTGGATTGTTTGTG-TTTTTTTTACATGTAACACAATTATTTTGCGGACAATGACATACTGTATAGACCATAGAGTGTATGATCATATAATGTGAAAGACTCCTGTTGTTAGAAATTTACCTTAAAAAAA]
[+] EMBL AK067054 [ATCTTGGTTGCCCTTTTGTTTATGCCATCTTGAGCCTTGTGCCCTCGAGGCCTTGACTTCCTTCCCCTACCCCCACCCCCAACATCTCCCTGAATTTAGCTGCTTTCGCGGCACAGATCAGTGCGCAAGCCATAAAGATCGAGCCTTAGCTTCGAGCTGGAATTTATCGGCGGATCGGCTGGCATTTTTTCAGTTTGTGCGCGCGCCTCAAGCTCAAGAACCGGGAGAGAGATGAGCTGCTTCCCGTGCTCGGGGTCGTCGGGGAAGGGCGGGGTTGACGCCAAGAGCGTGGCGGCGCTCTCGCCGGGTCCGCGGCCCGCGGCGAGCGCGGCACCAGATCGATCAAACTCATCACGTGGTTCAGGCATTAAGAAGGACGATTCTGTCCGAAGAGGAGGAAGCTCTGCGAGTGATGGTCCAGCCAAAATTTTCACTTTCCGAGAATTGGCTGTTGCCACCAAGAATTTCAGAAAAGACTGCCTGCTGGGTGAAGGTGGCTTTGGTCGTGTCTATAAAGGACAGATGGAGAATGGACAGGTTATTGCCGTGAAGCAACTTGACAGAAATGGCCTACAAGGAAACCGAGAATTTCTCGTGGAGGTTCTCATGCTAAGTCTCTTGCACCATCCTAATCTGGTCAGATTAATTGGCTACTGCGCAGATGGTGACCAGCGGCTCCTAGTTTATGAGTATATGCTATTGGGGTCACTAGAAAACCATCTTCATGATCGCCCACCAGGCAAGAAACCTCTTGACTGGAATGCAAGGATGAAGATTGCTGTTGGTGCAGCGAAGGGTTTGGAGTACCTGCATGATAAGGCAAATCCACCAGTCATATATAGAGATTTCAAATCATCAAATATTCTTCTGGGCGAAGACTATTACCCAAAGCTATCTGATTTTGGGCTTGCAAAACTTGGTCCAGTTGGTGACAAAACTCACGTATCAACAAGAGTTATGGGAACATATGGCTATTGTGCTCCAGAATATGCCATGACAGGACAGTTGACAGTAAAATCTGATGTTTACAGCTTTGGCGTTGTCTTCCTTGAACTCATTACAGGACGTAAAGCCATTGATCACACCCAACCTGCAGGGGAGCAAAATCTTGTTGCATGGGCTCGTCCACTGTTTAGAGACCGAAGGAAGTTCTGCCAAATGGCCGATCCATCGCTGCAAGGTTGTTATCCCAAAAGGGGTTTGTACCAGGCTTTAGCTGTTGCATCTATGTGCTTGCAGGAGAATGCAACATCTCGACCCCTCATTGCGGATATTGTCACTGCACTTTCTTATCTAGCTTCAAATCATTACGATCCTAATGC ACCTTCTGCAAAGAGTTCGAGGACTTGCCCATCCACCCCAAAGGCAAAAGCACATCGACGAACAACCAGTGTTCCTGATGCCCAACATGCTGCCGATTCACTTAACTGGAACTTCCCAGACTTGGGGAGGAAGGAAACTACTAGAGGGGAATTCGAG CAGGATCACAGTGAAGGTTAT GGCAGTGGCAGTAGCTCTGG AAGGAATGATGGT CTAGATGTTCCAGAACTGCTGGCCTTGCATAATGGACAAAATAACAGTGAAGCTGATATATATCACAAGTCCAGTGTCAAGCTTGATGCCCATGAGAAACAGAGATCAGGGTCAGGCAAAGGCAGCAGGCAGTTTTGATGCACATACAAACAGACATTGTTGCAATTCTTTCCCCGATTGCTGCCAATTTTGCCAGACATCTTCTCTGCTTCTGTTGAGGGTTGGATACTCTTTGTTGGTACAGTTGCGCGCTGTTATGGTCCAGGTGCTGTATGACTGTACCCATGGTTGTATTTTAGTTGTTTCCAAAGGTATACATGAAGATCATGATCTGGTTGAAGCAAGAAACCATCTTGTCGCAGATAAGGAGCATGCATTTTGATCGGTGTCAATTGCATTCTACCTGTAAAGATTTTTATTCTCTTTGTAATTAGGTCACAGTTTGTGCCATACCTATCATTCAGGAATTAGGATGTTTTATACA TACAGAAAACAATTCTTACCAGAATGCGTGTACAGACCTACATGCTACAGTGGATTGTTTGTG TTTTTTTTACATGTAACACAATTATTTTGCGGACAATGACATACTGTATAGACCATAGAGTGTATGATCATATAATGTGAAAGACTCCTGTTG ]
[+] EMBL AK119572 [ ATCTTGAGCCTTGTGCCCTCGAGGCCTTGACTTCCTTCCCCTACCCCCACCCCCAACATCTCCCTGAATTTAGCTGCTTTCGCGGCACAGATCAGTGCGCAAGCCATAAAGATCGAGCCTTAGCTTCGAGCTGGAATTTATCGGCGGATCGGCTGGCATTTTTTCAGTTCGTGCGCGCGCCTCAAGCTCAAGAACCGGGAGAGAGATGAGCTGCTTCCCGTGCTCGGGGTCGTCGGGGAAGGGCGGGGTTGACGCCAAGAGCGTGGCGGCGCTCTCGCCGGGTCCGCGGCCCGCGGGGAGCGCGGCACCAGATCGATCAAACTCATCACGTGGTTCAGGCATTAAGAAGGACGATTCTGTCCGAAGAGGAGGAAGCTCTGCGAATGATGGTCCAGCCAAAATTTTCACTTTCCGAGAATTGGCTGTTGCCACCAAGAATTTCAGAAAAGACTGCCTGCTGGGTGAAGGTGGCTTTGGTCGTGTCTATAAAGGACAGATGGAGAATGGACAGGTTATTGCCGTGAAGCAACTTGACAGAAATGGCCTACAAGGAAACCGAGAATTTCTCGTGGAGGTTCTCATGCTAAGTCTCTTGCACCATCCTAATCTGGTCAGATTAATTGGCTACTGCGCAGATGGTGACCAGCGGCTCCTAGTTTATGAGTATATGCTATTGGGGTCACTAGAAAACCATCTTCATGATCGCCCACCAGGCAAGAAACCTCTTGACTGGAATGCAAGGATGAAGATTGCTGTTGGTGCAGCGAAGGGTTTGGAGTACCTGCATGATAAGGCAAATCCACCAGTCATATATAGAGATTTCAAATCATCAAATATTCTTCTGGGCGAAGACTATTACCCAAAGCTATCTGATTTTGGGCTTGCAAAACTTGGTCCAGTTGGTGACAAAACTCACGTATCAACAAGAGTTATGGGAACATATGGCTATTGTGCTCCAGAATATGCCATGACAGGACAGTTGACAGTAAAATCTGATGTTTACAGCTTTGGCGTTGTCTTCCTTGAACTCATTACAGGACGTAATGCCATTGATCACACCCAACCTGCAGGGGAGCAAAATCTTGTTGCATGGGCTCGTCCACTGTTTAGAGACCGAAGGAAGTTCTGCCAAATGGCCGATCCATCGCTGCAAGGTTGTTATCCCAAAAGGGGTTTGTACCAGGCTTTAGCTGTTGCATCTATGTGCTTGCAGGAGAATGCAACATCTCGACCCCTCATTGCGGATATTGTCACTGCACTTTCTTATCTAGCTTCAAATCATTACGATCCTAATGC ACCTTCTGCAAAGAGTTCGAGGACTTGCCCATCCACCCCAAAGGCAAAAGCACATCGACGAACAACCAGTGCTCCTGATGCCCAACATGCTGCCGATTCACTTAACTGGAACTTCCCAGACTTGGGGAGGAAGGAAACTACTAGAGGGGAATTCGAG CAGGATCACAGTGAAGGTTAT GGCAGTGGCAGTAGCTCTGG AAGGAATGATGGT CTAGATGTTCCAGAACTGCTGGCCTTGCATAATGGACAAAATAACAGTGAAGCTGATATATATCACAAGTCCAGTGTCAAGCTTGATGCCCATGAGAAACAGAGATCAGGGTCAGGCAAAGGCAGCAGGCAGTTTTGATGCACATACAAACAGACATTGTTGCAATTCTTTCCCCGATTGCTGCCAATTTTGCCAGACATCTTCTCTGCTTCTGTTGAGGGTTGGATACTCTTTGTTGGTACAGTTGCGCGCTGTTATGGTCCAGGTGCTGTATGACTGTACCCATGGTTGTATTTTAGTTGTTTCCAAAGGTATACATGAAGATCATGATCTGGTTGAAGCAAGAAACCATCTTGTCGCAGATAAGGAGCATGCATTTTGATCGGTGTCAATTGCATTCTACCTGTAAAGATTTTTATTCTCTTTGTAATTAGGTCAC ]
[+] EMBL CB096608 [ TGCATGATAAGGCAAATCCACCAGTCATATATAGAGATTT AAATCATCAAATATTCTTCTGGGCGAAGACTCTTACCCAAAGCTATCTGATTTTGGGCTTGCAAAACTTGGTCCAGTTGGTGACAAAACTCACGTATCAACAAGAGTTATGGGAACATATGGCTATTGTGCTCCAGAATATGCCATGACAGGACAGTTGACAGTAAAATCTGATGTTTACAGCTTTGGCGTTGTCTTCCTTGAACTCATTACAGGACGTAAAGCCATTGATCACACCCAGCCTGCAGGGGAGCAAAATCTTGTTGCATGGGCTCGTCCACTGTTTAGAGACCGAAGGAAGTTCTGCCAAATGGCCGATCCATCGCTGCAAGGTTGTTATCCCAAAAGGGGTTTGTACCAGGCTTTAGCTGTTGCATCTATGTGCTTGCAGGAGAATGCAACATCTCGACCCCTCATTGCGGATATTGTCACTGCACTTTCTTATCTAGCTTCAAATCATTACGATCCTAATGCTACCTTCTGCAAAGAGTTCGAGGACTTGCCCATCCACCCCAAAGGCAAAAGCACATCGACGAACAACCAGTGTTCCTGATGCCCAACATGCCGCCGATTCACTTAACTGGAACTTCCCAGACTTGGGGAGGAAGGAAACTACTAGAGGGGAATTCGAGCCAGGATCACAGTGAAGGNTATGGGCAGTGGCAGTAGCTCTGGNAAGGAATGATGGTCCTAGATGNTCCAGAACTGCTGGCCTTGCATAATGGACAAAATAACAATGAAGCTGATATA ]
[+] EMBL CA765349 [ AACTACTAGAGGGGAATTCGAG CAGGATCACAGTGAAGGTTAT GGCAGTGGCAGTAGCTCTGG AAGGAATGATGGT CTAGATGTTCCAGAACTGCTGGCCTTGCATAATGGACAAAATAACAATGAAGCTGATATATATCACAAGTCCAGTGTCAAGCTTGATGCCCATGAGAAACAGAGATCAGGGTCAGGCAAAGGCAGCAGGCAGTTTTGATGCACATACAAGCAGACATTGTTGCAATTCTTTCCCCGATTGCTGCCAATTTTGCCAGACATCTTCTCTGCTTCTGTTGAGGGTTGGATACTCTTTGTTGGTACAGTTGCGCGCTGTTATGGTCCAGGTGCTGTATGACTGTACCCATGGTTGTATTTTAGTTGTTTCCAAAGGTATACATGAAGATCATGATCTGGTTGAAGCAAGAAACCATCTTGTCGCAGATAAGGAGCATGCATTTTGATCGGTGTCAATTGCATTCTACCTGTAAAGATTTTTATTCTCTTTGTAATTAGGTCACAGTTTGTGCCATACCTATCATTCAGGAATTAGGATGTTTTATACA TACAGAAAACAATTCTTACCAGAATGCGTGTACAGACCTACATGCTACAGNGGATTGTTTGNGTTTTTTTTTACATGTAACACAATTATTTTGCGGACAATGACATACTGTATAGACCATAGAGTGTATGATCATATAATGNGAAAGACTCC ]
[+] EMBL CA763795 [ TAACAATGAAGCTGATATATATCACAAGTCCAGTGTCAAGCTTGATGCCCATGAGAAACAGAGATCAGGGTCAGGCAGGGGCAGCAGGCAGTTTTGATGCACATACAAACAGACATTGTTGCAATTCTTTCCCCGATTGCTGCCAATTTTGCCAGACATCTTCTCTGCTTCTGTTGAGGGTTGGGTACTCTTTGTTGGTACAGTTGCGCGCTGTTATGGTCCAGGTGCTGTATGACTGTACCCATGGTTGTATTTTAGTTGTTTCCAAAGGTATACATGAAGATCATGATCTGGTTGAAGCAAGAAACCATCTTGTCGCAGATAAGGAGCATGCATTTTGATCGGTGTCAATTGCATTCTACCTGTAAAGATTTTTATTCTCTTTGTAATTAGGTC ]
[+] EMBL BI804323 [ TACAGTTGCGCGCTGTTATGGTCCAGGTGCTGTATGACTGTACCCATGGTTGTATTTTAGTTGTTTCCCAAGGTATACATGAAGATCATGATCTGGTTGAAGCAAGAAACCATCTTGTCGCAGATAAGGAGCATGCATTTTGATCGGTGTCAATTGCATTCTACCTGTAAAGATTTTTATTCTCTTTGTAATTAGGTCACAGTTTGTGCCATACCTATCATTCAGGAATTAGGATGTTTTATACACTACAGAAAACAATTCTTACCAGAATGCGTGTACAGACCTACATGCTACAGTGGATTGTTTGTG TTTTTTTTACATGTAACACAATTATTTTGCGGAC ATGACATACTGTATAGACCATAGAGTGTATGATCATATAATGTGAAAGACTCCTGTTGTTAGAAATTTACCTTAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||