These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9010#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1394 fasta sequence [TGCGCATTTCGGCTCTCGCCTTCTTCGCCTTCTTCTCCTCCTCCTCCTGTTCTTGATTTTCAGTATATTCAATTCATGGATTCGTGGATTGAGCAGACTTCCCTGAGCTTGGACCTCAACGTCGGCCTGCCGTCGACGGCGAGGAGATCATCGGCTCCGGCGGCGCCGAT-TAAGGTTCTCGTGGAGGAGAACTTCTTGTCCTTCAAGAAGGATCACGAGGTTGAGGCGCTGGAGGCGGAGCTCCGGCGA-GCGAGCGAGGAGAACAAGAAGCTGACCGAGATGCTTCGGGCGGTGGTGGCCAAGTACACCGAGCTGCAGGGACAGGTCAACGACATGATGTCGGCGGCGGCGGCGGCGGCGGTCAACGCCGGGAACCACCAGTCGTCGACGTCGGAGGGCGGCTCGGTGTCGCCATCGAGGAAGCGGATCCGTAGCGTCGACAGCCTCGACGACGCCGCCCACCACCGCAAGCCATCCCCTCCGTTCGTCGCCGCCGCCGCAGCCGCGGCCTACGCCTCCCCCGACCAGATGGAGTGCACGTCGGCGGCCGCCGCCGCCGCCGCGAAGCGCGTCGTCCGCGAGGACTGCAAGCCCAAGGTCTCCAAGCGCTTCGTCCACGCCGACCCCTCCGACCTCAGCCTCGTGGTGAAGGATGGGTATCAATGGCGGAAGTACGGGCAGAAGGTGACGAAGGACAACCCGTGCCCGCGAGCCTACTTCAGGTGCTCGTTCGCGCCGGCGTGCCCGGTGAAGAAGAAGGTGCAGCGCAGCGCCGACGACAACACCGTCCTCGTCGCCACGTACGAGGGCGAGCACAACCACGCCCAGCCGCCGCACCACGACGCCGGCAGCAAGACCGCCGCCGCCGCCAAGCACTCACAGCACCAGCCGCCACCGAGCGCCGCCGCCGCCGTCGTCCGGCAGCAGCAAGAGCAGGCGGCGGCGGCCGGGCCGTCGACGGAGGTGGCGGCGAGGAAGAACCTGGCCGAGCAGATGGCGGCGACGCTGACGAGGGACCCCGGGTTCAAGGCGGCGCTCGTCACGGCGCTCTCCGGCCGGATCCTCGAGCTCTCGCCGACCAAGAACTGATCCATCGTTAGAACGCCGATGAACTTTGCTCGATTTAGCTGAGATCGATCGATCAATTTACACGGTAAAATTTTAGAGTTGATCGATTTGCATGGCTTTGATCGGAGTTAGGCTAGAGAGAGAGAGGATTAACTGTGTATATTTAGTGATTGATTTTAATTAGCTCGCTCTACACGTGCCAAGGTGGCAGTTTAAGCAAAACGTACGATAATTCGTTGCAATTTGTAATTCAGCTAGAAGATTAGTGTATTCATGGAGATCTATTCAGAGTCTCCCAGA--TATATATATAGAGAGAGAGATAGTAG] [+] EMBL AK106282 [TGCGCATTTCGGCTCTCGCCTTCTTCGCCTTCTTCTCCTCCTCCTCCTGTTCTTGATTTTCAGTATATTCAATTCATGGATTCGTGGATTGAGCAGACTTCCCTGAGCTTGGACCTCAACGTCGGCCTGCCGTCGACGGCGAGGAGATCATCGGCTCCGGCGGCGCCGAT TAAGGTTCTCGTGGAGGAGAACTTCTTGTCCTTCAAGAAGGATCACGAGGTTGAGGCGCTGGAGGCGGAGCTCCGGCGA GCGAGCGAGGAGAACAAGAAGCTGACCGAGATGCTTCGGGCGGTGGTGGCCAAGTACACCGAGCTGCAGGGACAGGTCAACGACATGATGTCGGCGGCGGCGGCGGCGGCGGTCAACGCCGGGAACCACCAGTCGTCGACGTCGGAGGGCGGCTCGGTGTCGCCATCGAGGAAGCGGATCCGTAGCGTCGACAGCCTCGACGACGCCGCCCACCACCGCAAGCCATCCCCTCCGTTCGTCGCCGCCGCCGCAGCCGCGGCCTACGCCTCCCCCGACCAGATGGAGTGCACGTCGGCGGCCGCCGCCGCCGCCGCGAAGCGCGTCGTCCGCGAGGACTGCAAGCCCAAGGTCTCCAAGCGCTTCGTCCACGCCGACCCCTCCGACCTCAGCCTCGTGGTGAAGGATGGGTATCAATGGCGGAAGTACGGGCAGAAGGTGACGAAGGACAACCCGTGCCCGCGAGCCTACTTCAGGTGCTCGTTCGCGCCGGCGTGCCCGGTGAAGAAGAAGGTGCAGCGCAGCGCCGACGACAACACCGTCCTCGTCGCCACGTACGAGGGCGAGCACAACCACGCCCAGCCGCCGCACCACGACGCCGGCAGCAAGACCGCCGCCGCCGCCAAGCACTCACAGCACCAGCCGCCACCGAGCGCCGCCGCCGCCGTCGACCGGCAGCAGCAAGAGCAGGCGGCGGCGGCCGGGCCGTCGACGGAGGTGGCGGCGAGGAAGAACCTGGCCGAGCAGATGGCGGCGACGCTGACGAGGGACCCCGGGTTCAAGGCGGCGCTCGTCACGGCGCTCTCCGGCCGGATCCTCGAGCTCTCGCCGACCAAGAACTGATCCATCGTTAGAACGCCGATGAACTTTGCTCGATTTAGCTGAGATCGATCGATCAATTTACACGGTAAAATTTTAGAGTTGATCGATTTGCATGGCTTTGATCGGAGTTAGGCTAGAGAGAGAGAGGATTAACTGTGTATATTTAGTGATTGATTTTAATTAGCTCGCTCTACACGTGCCAAGGTGGCAGTTTAAGCAAAACGTACGATAATTCGTTGCAATTTGTAATTCAGCTAGAAGATTAGTGTATTCATGGAGATCTATTCAGAGTCTCCCAGA TATATATATAGAGAGAGAGATAGTAG] [+] EMBL C73697 [ CGGCTCTCGCCTTCTTCTCCTTCTTCTCCTCCTCCTCCTGTTCTTGATTTTCAGTATATTCAATTCATGGATTCGTGGATTGAGCAGACTTCCCTNAGCTTGGACCTCAACNTCNGCCTGCCGTNNACNG GAGGAGATCATCTGCTCCGGCGGCGC ATNTAAGGTTCTCGTGGAGGAGAACTTCTTGTCCTTCAAGAAGGATCACGAGGTTGAGGCGCTGGAGGC GA CTCCNGCGANGCGAGCGAGGAGAACAAGAAGCTGACCGAGAT ] [+] EMBL AK119644 [ GATTCGTGGATTGAGCAGACTTCCCTGAGCTTGGACCTCAACGTCGGCCTGCCGTCGACGGCGAGGAGATCATCGGCTCCGGCGGCGCCGAT TAAGGTTCTCGTGGAGGAGAACTTCTTGTCCTTCAAGAAGGATCACGAGGTTGAGGCGCTGGAGGCGGAGCTCCGGCGA GCGAGCGAGGAGAACAAGAAGCTGACCGAGATGCTTCGGGCGGTGGTGGCCAAGTACACCGAGCTGCAGGGACAGGTCAACGACATGATGTCGGCGGCGGCGGCGGCGGCGGTCAACGCCGGGAACCACCAGTCGTCGACGTCGGAGGGCGGCTCGGTGTCGCCATCGAGGAAGCGGATCCGTAGCGTCGACAGCCTCGACGACGCCGCCCACCACCGCAAGCCATCCCCTCCGTTCGTCGCCGCCGCCGCAGCCGCGGCCTACGCCTCCCCCGACCAGATGGAGTGCACGTCGGCGGCCGCCGCCGCCGCCGCGAAGCGCGTCGTCCGCGAGGACTGCAAGCCCAAGGTCTCCAAGCGCTTCGTCCACGCCGACCCCTCCGACCTCAGCCTCGTGGTGAAGGATGGGTATCAATGGCGGAAGTACGGGCAGAAGGTGACGAAGGACAACCCGTGCCCGCGAGCCTACTTCAGGTGCTCGTTCGCGCCGGCGTGCCCGGTGAAGAAGAAGGTGCAGCGCAGCGCCGACGACAACACCGTCCTCGTCGCCACGTACGAGGGCGAGCACAACCACGCCCAGCCGCCGCACCACGACGCCGGCAGCAAGACCGCCGCCGCCGCCAAGCACTCACAGCACCAGCGGCCACCGAGCGCCGCCGCCGCCGTCGTCCGGCAGCAGCAAGAGCAGGCGGCGGCGGCCGGGCCGTCGACGGAGGTGGCGGCGAGGAAGAACCTGGCCGAGCAGATGGCGGCGACGCTGACGAGGGACCCCGGGTTCAAGGCGGCGCTCGTCACGGCGCTCTCCGGCCGGATCCTCGAGCTCTCGCCGACCAAGAACTGATCCATCGTTAGAACGCCGATGAACTTTGCTCGATTTAGCTGAGATCGATCGATCAATTTACACGGTAAAATTTTAGAGTTGATCGATTTGCATGGCTTTGATCGGAGTTAGGCTAGAGAGAGAGAGGATTAACTGTGTATATTTAGTGATTGATTTTAATTAGCTCGCTCTACACGTGCCAAGGTGGCAGTTTAAGCAAAACGTACGATAATTCGTTGCAATTTGTAATTCAGCTAGAAGATTAGTGTATTCATGGAGATCTATTCAGAGTCTCCCAGA TATATATATAGAGAGAGAGATAGTAG] [+] EMBL AU164125 [ CGTGGATTGAGCAGACTTCCCTGAGCTTGGACCTCAACGTCGGCCTGCCGTCGACGGCGAGGAGATCATCGGCTCCGGCGGCGCCGAT TAAGGTTCTCGTGGAGGAGAACTTCTTGTCCTTCAAGAAGGATCACGAGGTTGAGGCGCTGGAGGCGGAGCTCCGGCGA GCGAGCGAGGAGAACAAGAAGCTGACCGAGATGCTTCGGGCGGTGGTGGCCAAGTACACCGAGCTGCAGGGACAGGTCAACGACATGATGTCGGCGGCGGCGGCGGCGGCGGTCAACGCCGGGAACCACCAGTCGTCGACGTCGGAGGGCGGCTCGGTGTCGCCATCGAGGAAGCGGATCCGTAGCGTCGACAGCCTCGACGACGCCGCCCACCACCGCAAGCCATCCCCTCCGTTCGTCGCCGCCCGCGCAGCCGCGGCCTACGCCTCCCCCGACCAGATGGAGTGCAC ] [-] EMBL CB627414 [ GACAACACCGTCCTTGTTGCCATGTACGAGGGCGAGCACAACCACGCCCAGCCGCCGCACCACGACGCCGGCAGCAAGACCGCCACCGCCGCCAAGCACTCACAGCTCCAGCCGCCACCGAGCGCCTCCGCCGCCGTCGTCCGGCAGCAGCAAGAGCAGGCGGCGGCGGCCGGGCCGTCGACGGAGGTGGCGGCGAGGAAGAACCTGGCCGAGCAGATGGCGGCGACGCTGACGAGGGACCCCGGGTTCAAGGCGGCGCTCGTCACGGCGCTCTCCGGCCGGATCCTCGAGCTCTCGCCGACCAAGAACTGATCCATCGTTAGAACGCCGATGAACTTTGCTCGATTTAGCTGAGATCGATCGATCAATTTACACGGTAAAATTTTAGAGTTGATCGATTTGCATGGCTTTGATCGGAGTTAGGCTAGAGAGAGAGAGGATTAACTGTGTATATTTAGTGATTGATTTTAATTAGCTCGCTCTACACGTGCCAAGGTGGCAGTTTAAGCAAAACGTAGGATAATTCGTTGCAATTTGTAATTCAGCTAGAAGATTAGTGTATTCATGGAGATCTATTCAGAGTCTCCTATAAGTATATATATAta ] [+] EMBL CA754553 [ CGTCCTCGTCGCCACGTACGAGGGCGAGCACAACCACGCCCAGCCGCCGCACCACGACGCCGGCAGCAAGACCGCCGCCGCCGCCAAGCACTCACAGCACCAGCCGCCACCGAGCGCCGCCGCCGCCGTCGTCCGGCAGCAGCAAGAGCAGGCGGCGGCGGCCGGGCCGTCGACGGAGGTGGCGGCGAGGAAGAACCTGGCCGAGCAGATGGCGGCGACGCTGACGAGGGACCCCGGGTTCAAGGCGGCGCTCGTCACGGCGCTCTCCGGCCGGATCCTCGAGCTCTCGCCGACCAAGAACTGATCCATCGTTAGAACGCCGATGAACTTTGCTCGATTTAGCTGAGATCGATCGATCAATTTACACGGTAAAATTTTAGAGTTGATCGATTTGCATGGCTTTGATCGGAGTTAGGCTAGAGAGAGAGAGGATTAACTGTGTATATTTAGTGATTGATTTTAATTAGCTCGCTCTACACGTGCCAAGGTGGCAGTTTAAGCAAAACGTACGATAATTCGTTGCAATTTGTAATTCAGCTAGAAGATTAGTGTATTCATGGAGATCTATTCAGAGTCTCCCAGA TATATTTATAGAGAGAGAGATAG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||