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Oryza sativa
cluster # 9044 cluster # 9044       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9044#0 length = 1842 sequences # 4  
consensus_9044#1 length = 644 sequences # 1  
consensus_9044#2 length = 401 sequences # 1  

consensusID : consensus_9044#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1842
fasta sequence
                              [TTCTTTTCTCCCATTAGTTTCTTCTCAAATTGCCTTGGTTTGCGTGTATCAGTGTATGGTCATAGAGCAAACCTAACTATAACTACCAAATCATAATTATATTTGGTCACAAATATATATATCTATAGCCTTTGTCCAATAGAAGGATTGAGCATTTGCTTTCCCGTGTCATCTTTGTGAAGCAAAGCGATCGATGGAGGCGCGAGTGCTTGTGTTGGTGACCATGGCGATCGCCGCCGCGTGCTGGGCCACCGGCGGCGTGGCCGCGGCGGCGACGGCGGCGACGACGACGACGACGTCCCGCCTCAAGGGCCTGCGCGTGCACCTGACGCACGTGGACGCGCACGGCAACTACTCGAGGCACCAGCTGCTGCGGCGGGCGGCGCGGCGGAGCCACCACCGCATGTCGAGGCTGGTCGCGCGGGCCACCGGCGTGCCGATGACGTCGAGCAAGGCGGCCGGCGGCGGGGACCTGCAGGTGCCGGTGCACGCCGGGAACGGCGAGTTCCTGATGGACGTGTCCATCGGCACGCCGGCGCTGGCCTACTCCGCCATCGTGGACACCGGCAGCGACCTCGTGTGGACGCAGTGCAAGCCGTGCGTGGACTGCTTCAAGCAGTCGACGCCGGTGTTCGACCCGTCGTCGTCGTCCACCTACGCCACCGTGCCGTGCTCCAGCGCCTCCTGCAGCGACCTCCCCACCTCGAAGTGCACGTCGGCGTCCAAGTGCGGCTACACCTACACCTACGGCGACTCCTCGTCGACGCAGGGCGTCCTCGCCACGGAGACGTTCACGCTGGCCAAGTCGAAGCTCCCGGGCGTCGTCTTCGGCTGCGGCGACACCAACGAGGGCGACGGGTTCTCCCAGGGCGCCGGGCTCGTCGGCCTCGGCCGCGGCCCGCTCTCGCTGGTGTCCCAGCTCGGCCTGGACAAGTTCTCCTACTGCCTCACCTCCCTCGACGACACCAACAACAGCCCGCTCCTCCTCGGCTCCCTCGCCGGCATCTCCGAGGCCTCCGCCGCCGCGTCGTCGGTGCAAACCACGCCTCTGATCAAGAACCCGAGCCAGCCATCCTTCTACTACGTGTCCCTCAAGGCCATCACCGTCGGGTCGACGCGGATCAGCCTCCCGAGCTCGGCGTTCGCCGTCCAGGACGACGGCACGGGCGGCGTCATCGTGGACTCCGGCACGTCGATCACCTACCTGGAGGTGCAGGGGTACCGCGCCCTGAAGAAGGCGTTCGCGGCGCAGATGGCGCTGCCGGCGGCGGACGGGTCGGGCGTCGGGCTCGACCTGTGCTTCCGGGCGCCGGCCAAGGGCGTGGACCAGGTGGAGGTGCCGAGGCTGGTGTTCCACTTCG-ACGGCGGCGCCGACCTGGACCTGCCGGCGGAGAACTACATGGTGCTCGACGGCGGCTCCGGCGCGCTGTGCCTCACGGTGATGGGCTCCCGGGGGCTCTCCATCATCGGCAACTTCCAGCAGCAGAATTTCCAGTTCGTGTACGACGTCGGCCACGACACGCTCTCCTTCGCGCCCGTGCAGTGCAACAAGTTGTGACGCTCGCCCGTGCCCGCGTAGGCGTACGTGCTCCGTGTTACGTGAGTCGTGATGTATACGCGTACTTGTGTATGTACGATGCACTTTGTACTAGTAGTACTCATCTAACAGGACGGATAGACGAATATGCGTTCAACACCGATCGATCATCGATGTAATTATTATCGAATTGTTCATTTGTTTGGTATGGTTCGGGAACTACTACGTTCTGGCCTTCTGGGAAGCATTGGTTATTGGGGGAAAAAATAGCAAGAGAACTCGTTTCTCATTTTCAGTAAAAAAAA]

[+] EMBL AK120786             [TTCTTTTCTCCCATTAGTTTCTTCTCAAATTGCCTTGGTTTGCGTGTATCAGTGTATGGTCATAGAGCAAACCTAACTATAACTACCAAATCATAATTATATTTGGTCACAAATATATATATCTATAGCCTTTGTCCAATAGAAGGATTGAGCATTTGCTTTCCCGTGTCATCTTTGTGAAGCAAAGCGGTCGATGGAGGCGCGAGTGCTTGTGTTGGTGACCATGGCGATCGCCGCCGCGTGCTGGGCCACCGGCGGCGTGGCCGCGGCGGCGACGGCGGCGACGACGACGACGACGTCCCGCCTCAAGGGCCTGCGCGTGCACCTGACGCACGTGGACGCGCACGGCAACTACTCGAGGCACCAGCTGCTGCGGCGGGCGGCGCGGCGGAGCCACCACCGCATGTCGAGGCTGGTCGCGCGGGCCACCGGCGTGCCGATGACGTCGAGCAAGGCGGCCGGCGGCGGGGACCTGCAGGTGCCGGTGCACGCCGGGAACGGCGAGTTCCTGATGGACGTGTCCATCGGCACGCCGGCGCTGGCCTACTCCGCCATCGTGGACACCGGCAGCGACCTCGTGTGGACGCAGTGCAAGCCGTGCGTGGACTGCTTCAAGCAGTCGACGCCGGTGTTCGACCCGTCGTCGTCGTCCACCTACGCCACCGTGCCGTGCTCCAGCGCCTCCTGCAGCGACCTCCCCACCTCGAAGTGCACGTCGGCGTCCAAGTGCGGCTACACCTACACCTACGGCGACTCCTCGTCGACGCAGGGCGTCCTCGCCACGGAGACGTTCACGCTGGCCAAGTCGAAGCTCCCGGGCGTCGTCTTCGGCTGCGGCGACACCAACGAGGGCGACGGGTTCTCCCAGGGCGCCGGGCTCGTCGGCCTCGGCCGCGGCCCGCTCTCGCTGGTGTCCCAGCTCGGCCTGGACAAGTTCTCCTACTGCCTCACCTCCCTCGACGACACCAACAACAGCCCGCTCCTCCTCGGCTCCCTCGCCGGCATCTCCGAGGCCTCCGCCGCCGCGTCGTCGGTGCAAACCACGCCTCTGATCAAGAACCCGAGCCAGCCATCCTTCTACTACGTGTCCCTCAAGGCCATCACCGTCGGGTCGACGCGGATCAGCCTCCCGAGCTCGGCGTTCGCCGTCCAGGACGACGGCACGGGCGGCGTCATCGTGGACTCCGGCACGTCGATCACCTACCTGGAGGTGCAGGGGTACCGCGCCCTGAAGAAGGCGTTCGCGGCGCAGATGGCGCTGCCGGCGGCGGACGGGTCGGGCGTCGGGCTCGACCTGTGCTTCCGGGCGCCGGCCAAGGGCGTGGACCAGGTGGAGGTGCCGAGGCTGGTGTTCCACTTCG ACGGCGGCGCCGACCTGGACCTGCCGGCGGAGAACTACATGGTGCTCGACGGCGGCTCCGGCGCGCTGTGCCTCACGGTGATGGGCTCCCGGGGGCTCTCCATCATCGGCAACTTCCAGCAGCAGAATTTCCAGTTCGTGTACGACGTCGGCCACGACACGCTCTCCTTCGCGCCCGTGCAGTGCAACAAGTTGTGACGCTCGCCCGTGCCCGCGTAGGCGTACGTGCTCCGTGTTACGTGAGTCGTGATGTATACGCGTACTTGTGTATGTACGATGCACTTTGTACTAGTAGTACTCATCTAACAGGACGGATAGACGAATATGCGTTCAACACCGATCGATCATCGATGTAATTATTATCGAATTGTTCATTTGTTTGGTATGGTTC                                                                                           ]
[+] EMBL C98567               [                                                                                                                                                                       GTCATCTTTGTGAAGCAAAGCGATCGATGGAGGCGCGAGTGCTTGTGTTGGTGACCATGGCGATCGCCGCCGCGTGCTGGGCCANCGGCGGCGTGGCCGCGGCGGCGACGGCGGCGACGACGACGACGACGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK109494             [                                                                                                                                                                                  GAAGCAAAGCGATCGATGGAGGCGCGAGTGCTTGTGTTGGTGACCATGGCGATCGCCGCCGCGTGCTGGGCCACCGGCGGCGTGGCCGCGGCGGCGACGGCGGCGACGACGACGACGACGTCCCGCCTCAAGGGCCTGCGCGTGCACCTGACGCACGTGGACGCGCACGGCAACTACTCGAGGCACCAGCTGCTGCGGCGGGCGGCGCGGCGGAGCCACCACCGCATGTCGAGGCTGGTCGCGCGGGCCACCGGCGTGCCGATGACGTCGAGCAAGGCGGCCGGCGGCGGGGACCTGCAGGTGCCGGTGCACGCCGGGAACGGCGAGTTCCTGATGGACGTGTCCATCGGCACGCCGGCGCTGGCCTACTCCGCCATCGTGGACACCGGCAGCGACCTCGTGTGGACGCAGTGCAAGCCGTGCGTGGACTGCTTCAAGCAGTCGACGCCGGTGTTCGACCCGTCGTCGTCGTCCACCTACGCCACCGTGCCGTGCTCCAGCGCCTCCTGCAGCGACCTCCCCACCTCGAAGTGCACGTCGGCGTCCAAGTGCGGCTACACCTACACCTACGGCGACTCCTCGTCGACGCAGGGCGTCCTCGCCACGGAGACGTTCACGCTGGCCAAGTCGAAGCTCCCGGGCGTCGTCTTCGGCTGCGGCGACACCAACGAGGGCGACGGGTTCTCCCAGGGCGCCGGGCTCGTCGGCCTCGGCCGCGGCCCGCTCTCGCTGGTGTCCCAGCTCGGCCTGGACAAGTTCTCCTACTGCCTCACCTCCCTCGACGACACCAACAACAGCCCGCTCCTCCTCGGCTCCCTCGCCGGCATCTCCGAGGCCTCCGCCGCCGCGTCGTCGGTGCAAACCACGCCTCTGATCAAGAACCCGAGCCAGCCATCCTTCTACTACGTGTCCCTCAAGGCCATCACCGTCGGGTCGACGCGGATCAGCCTCCCGAGCTCGGCGTTCGCCGTCCAGGACGACGGCACGGGCGGCGTCATCGTGGACTCCGGCACGTCGATCACCTACCTGGAGGTGCAGGGGTACCGCGCCCTGAAGAAGGCGTTCGCGGCGCAGATGGCGCTGCCGGCGGCGGACGGGTCGGGCGTCGGGCTCGACCTGTGCTTCCGGGCGCCGGCCAAGGGCGTGGACCAGGTGGAGGTGCCGAGGCTGGTGTTCCACTTCG ACGGCGGCGCCGACCTGGACCTGCCGGCGGAGAACTACATGGTGCTCGACGGCGGCTCCGGCGCGCTGTGCCTCACGGTGATGGGCTCCCGGGGGCTCTCCATCATCGGCAACTTCCAGCAGCAGAATTTCCAGTTCGTGTACGACGTCGGCCACGACACGCTCTCCTTCGCGCCCGTGCAGTGCAACAAGTTGTGACGCTCGCCCGTGCCCGCGTAGGCGTACGTGCTCCGTGTTACGTGAGTCGTGATGTATACGCGTACTTGTGTATGTACGATGCACTTTGTACTAGTAGTACTCATCTAACAGGACGGATAGACGAATATGCGTTCAACACCGATCGATCATCGATGTAATTATTATCGAATTGTTCATTTGTTTGGTATGGTTCGGGAACTACTACGTTCTG                                                                         ]
[+] EMBL BM418737             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCC GC GCGGAC GGTC GGC TCGGGCTCGACCTGTGCTTCCGGGCGCC GCCAAGGGCGTGGACCAGGTGGAGGT CCGA GCTGGTGTTCCACTTCGTACGGCGGCGCCGACCTGGACCTGCCGGCGGAGAACTACATGGTGCTCGAC GCGGCTCCGGCGCGCTGTGCCTCACGGTGATGGGCTCCCGGGGGCTCTCCATCATCGGCAACTTCCAGCAGCAGAATTTCCAGTTCGTGTACGACGTCGGCCACGACACGCTCTCCTTCGCGCCCGTGCAGTGCAACAAGTTGTGACGCTCGCCCGTGCCCGCGTAGGCGTACGTGCTCCGTGTTACGTGAGTCGTGATGTATACGCGTACTTGTGTATGTACGATGCACTTTGTACTAGTAGTACTCATCTAACAGGACGGATAGACGAATATGCGTTCAACACCGATCGATCATCGATGTAATTATTATCGAATTGTTCATTTGTTTGGTATGGTTCGGGAACTACTACGTTCTGGCCTTCTGGGAAGCATTGGTTATTGGGGGAAAAAATAGCAAGAGAACTCGTTTCTCATTTTCAGTAAAAAAAA]


>consensus_9044#0 TTCTTTTCTCCCATTAGTTTCTTCTCAAATTGCCTTGGTTTGCGTGTATCAGTGTATGGT CATAGAGCAAACCTAACTATAACTACCAAATCATAATTATATTTGGTCACAAATATATAT ATCTATAGCCTTTGTCCAATAGAAGGATTGAGCATTTGCTTTCCCGTGTCATCTTTGTGA AGCAAAGCGATCGATGGAGGCGCGAGTGCTTGTGTTGGTGACCATGGCGATCGCCGCCGC GTGCTGGGCCACCGGCGGCGTGGCCGCGGCGGCGACGGCGGCGACGACGACGACGACGTC CCGCCTCAAGGGCCTGCGCGTGCACCTGACGCACGTGGACGCGCACGGCAACTACTCGAG GCACCAGCTGCTGCGGCGGGCGGCGCGGCGGAGCCACCACCGCATGTCGAGGCTGGTCGC GCGGGCCACCGGCGTGCCGATGACGTCGAGCAAGGCGGCCGGCGGCGGGGACCTGCAGGT GCCGGTGCACGCCGGGAACGGCGAGTTCCTGATGGACGTGTCCATCGGCACGCCGGCGCT GGCCTACTCCGCCATCGTGGACACCGGCAGCGACCTCGTGTGGACGCAGTGCAAGCCGTG CGTGGACTGCTTCAAGCAGTCGACGCCGGTGTTCGACCCGTCGTCGTCGTCCACCTACGC CACCGTGCCGTGCTCCAGCGCCTCCTGCAGCGACCTCCCCACCTCGAAGTGCACGTCGGC GTCCAAGTGCGGCTACACCTACACCTACGGCGACTCCTCGTCGACGCAGGGCGTCCTCGC CACGGAGACGTTCACGCTGGCCAAGTCGAAGCTCCCGGGCGTCGTCTTCGGCTGCGGCGA CACCAACGAGGGCGACGGGTTCTCCCAGGGCGCCGGGCTCGTCGGCCTCGGCCGCGGCCC GCTCTCGCTGGTGTCCCAGCTCGGCCTGGACAAGTTCTCCTACTGCCTCACCTCCCTCGA CGACACCAACAACAGCCCGCTCCTCCTCGGCTCCCTCGCCGGCATCTCCGAGGCCTCCGC CGCCGCGTCGTCGGTGCAAACCACGCCTCTGATCAAGAACCCGAGCCAGCCATCCTTCTA CTACGTGTCCCTCAAGGCCATCACCGTCGGGTCGACGCGGATCAGCCTCCCGAGCTCGGC GTTCGCCGTCCAGGACGACGGCACGGGCGGCGTCATCGTGGACTCCGGCACGTCGATCAC CTACCTGGAGGTGCAGGGGTACCGCGCCCTGAAGAAGGCGTTCGCGGCGCAGATGGCGCT GCCGGCGGCGGACGGGTCGGGCGTCGGGCTCGACCTGTGCTTCCGGGCGCCGGCCAAGGG CGTGGACCAGGTGGAGGTGCCGAGGCTGGTGTTCCACTTCGACGGCGGCGCCGACCTGGA CCTGCCGGCGGAGAACTACATGGTGCTCGACGGCGGCTCCGGCGCGCTGTGCCTCACGGT GATGGGCTCCCGGGGGCTCTCCATCATCGGCAACTTCCAGCAGCAGAATTTCCAGTTCGT GTACGACGTCGGCCACGACACGCTCTCCTTCGCGCCCGTGCAGTGCAACAAGTTGTGACG CTCGCCCGTGCCCGCGTAGGCGTACGTGCTCCGTGTTACGTGAGTCGTGATGTATACGCG TACTTGTGTATGTACGATGCACTTTGTACTAGTAGTACTCATCTAACAGGACGGATAGAC GAATATGCGTTCAACACCGATCGATCATCGATGTAATTATTATCGAATTGTTCATTTGTT TGGTATGGTTCGGGAACTACTACGTTCTGGCCTTCTGGGAAGCATTGGTTATTGGGGGAA AAAATAGCAAGAGAACTCGTTTCTCATTTTCAGTAAAAAAAA



consensusID : consensus_9044#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 644
fasta sequence
                              [CCCTCAAGCCATCACCTCGGGTCGACGCGGATCACCCTCCCGAGCTTCGCNTTCCGCCGTCCAGGACGACGGCACGGNCGGCTTCATCGTGGACTCCGGCACNTCGATCACCTACCTGGAGGTGCAGGGGTACCGCGCCCTGAAGAAGGCGTTCTCGGCGCAGATGGCGCTNCCGGCGGCGGACGGNTCGGGCGTCGGGCTCGACCTGTGCTTCCGGGCGCCGGCCAAGGGCNTGGACCAGGTGGAGGTGCCGAGGCTGGTGTTCCATTCGANGCGGCGCCGACCTGGACTGCCGGCGGAGAACTACATGGTGCTCGACGGCGGCTCCCGGCGCGCTGTGCCTCACGGTGATGGGCTCCCGGGGGCTCTCCATCATCGGCAATTCCAGCAGCAGAATTTCCAGTTCGTGTACGACGTCGGCCACGACACGCTCTCTTCGCGCCCGTGCAGTGCAACAAGTTGTGACGCTCGCCCGTGCCCGCGTAGGCGTACGTGCTCCGTGTTACGTGAGTCGTGATGTATACGCGTACTTGTGTATGTACGATGCACTTTGTACTAGTAGTACTCATCTAACAGGACGGATAGACGAATATGCGTTCAACACCGATCGATCATCGATGTAATTATTATCGAAAAAAAAAAAA]

[+] EMBL C98568               [CCCTCAAGCCATCACCTCGGGTCGACGCGGATCACCCTCCCGAGCTTCGCNTTCCGCCGTCCAGGACGACGGCACGGNCGGCTTCATCGTGGACTCCGGCACNTCGATCACCTACCTGGAGGTGCAGGGGTACCGCGCCCTGAAGAAGGCGTTCTCGGCGCAGATGGCGCTNCCGGCGGCGGACGGNTCGGGCGTCGGGCTCGACCTGTGCTTCCGGGCGCCGGCCAAGGGCNTGGACCAGGTGGAGGTGCCGAGGCTGGTGTTCCATTCGANGCGGCGCCGACCTGGACTGCCGGCGGAGAACTACATGGTGCTCGACGGCGGCTCCCGGCGCGCTGTGCCTCACGGTGATGGGCTCCCGGGGGCTCTCCATCATCGGCAATTCCAGCAGCAGAATTTCCAGTTCGTGTACGACGTCGGCCACGACACGCTCTCTTCGCGCCCGTGCAGTGCAACAAGTTGTGACGCTCGCCCGTGCCCGCGTAGGCGTACGTGCTCCGTGTTACGTGAGTCGTGATGTATACGCGTACTTGTGTATGTACGATGCACTTTGTACTAGTAGTACTCATCTAACAGGACGGATAGACGAATATGCGTTCAACACCGATCGATCATCGATGTAATTATTATCGAAAAAAAAAAAA]


>consensus_9044#1 CCCTCAAGCCATCACCTCGGGTCGACGCGGATCACCCTCCCGAGCTTCGCNTTCCGCCGT CCAGGACGACGGCACGGNCGGCTTCATCGTGGACTCCGGCACNTCGATCACCTACCTGGA GGTGCAGGGGTACCGCGCCCTGAAGAAGGCGTTCTCGGCGCAGATGGCGCTNCCGGCGGC GGACGGNTCGGGCGTCGGGCTCGACCTGTGCTTCCGGGCGCCGGCCAAGGGCNTGGACCA GGTGGAGGTGCCGAGGCTGGTGTTCCATTCGANGCGGCGCCGACCTGGACTGCCGGCGGA GAACTACATGGTGCTCGACGGCGGCTCCCGGCGCGCTGTGCCTCACGGTGATGGGCTCCC GGGGGCTCTCCATCATCGGCAATTCCAGCAGCAGAATTTCCAGTTCGTGTACGACGTCGG CCACGACACGCTCTCTTCGCGCCCGTGCAGTGCAACAAGTTGTGACGCTCGCCCGTGCCC GCGTAGGCGTACGTGCTCCGTGTTACGTGAGTCGTGATGTATACGCGTACTTGTGTATGT ACGATGCACTTTGTACTAGTAGTACTCATCTAACAGGACGGATAGACGAATATGCGTTCA ACACCGATCGATCATCGATGTAATTATTATCGAAAAAAAAAAAA



consensusID : consensus_9044#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 401
fasta sequence
                              [CCCCACNGGATCTATAGCCTTTGTCCAATAGAAGGATTGAGCATTTGCTTTCCCGTGTCNTCTTTGTGAACAAACCNATCNATGGAGGCNCNAGTGCTTGTNTTGGTGACCATGGCAATCGCCNCCNCNTGCTGGGCCACCGGCGGGCNTGGCCCCGGCGGCAACGGCGGCAACAACAACAANAAANTCCCNCCNCAGGGGCGGGCGCGTGCNCCTGANCCCNNTGACNCCCCGGGNACTNCNCAAGGNNCCNNTTCTTTNCGGGGGGGGGGGGGCCGGNGGANANNNCCNCCCCNTTTTTTAGGGNNGGTCNCNCCGGGCCNCCGGNTTGCCCAANAAANTTNANTTTTGTTTTNNGGNGGGGGGGNACNCCAGGTGCCNGGTGCCCCCCGGGNAACGGG]

[+] EMBL AA754634             [CCCCACNGGATCTATAGCCTTTGTCCAATAGAAGGATTGAGCATTTGCTTTCCCGTGTCNTCTTTGTGAACAAACCNATCNATGGAGGCNCNAGTGCTTGTNTTGGTGACCATGGCAATCGCCNCCNCNTGCTGGGCCACCGGCGGGCNTGGCCCCGGCGGCAACGGCGGCAACAACAACAANAAANTCCCNCCNCAGGGGCGGGCGCGTGCNCCTGANCCCNNTGACNCCCCGGGNACTNCNCAAGGNNCCNNTTCTTTNCGGGGGGGGGGGGGCCGGNGGANANNNCCNCCCCNTTTTTTAGGGNNGGTCNCNCCGGGCCNCCGGNTTGCCCAANAAANTTNANTTTTGTTTTNNGGNGGGGGGGNACNCCAGGTGCCNGGTGCCCCCCGGGNAACGGG]


>consensus_9044#2 CCCCACNGGATCTATAGCCTTTGTCCAATAGAAGGATTGAGCATTTGCTTTCCCGTGTCN TCTTTGTGAACAAACCNATCNATGGAGGCNCNAGTGCTTGTNTTGGTGACCATGGCAATC GCCNCCNCNTGCTGGGCCACCGGCGGGCNTGGCCCCGGCGGCAACGGCGGCAACAACAAC AANAAANTCCCNCCNCAGGGGCGGGCGCGTGCNCCTGANCCCNNTGACNCCCCGGGNACT NCNCAAGGNNCCNNTTCTTTNCGGGGGGGGGGGGGCCGGNGGANANNNCCNCCCCNTTTT TTAGGGNNGGTCNCNCCGGGCCNCCGGNTTGCCCAANAAANTTNANTTTTGTTTTNNGGN GGGGGGGNACNCCAGGTGCCNGGTGCCCCCCGGGNAACGGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9044#0      TTCTTTTCTCCCATTAGTTTCTTCTCAAATTGCCTTGGTTTGCGTGTATCAGTGTATGGT 60
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      CATAGAGCAAACCTAACTATAACTACCAAATCATAATTATATTTGGTCACAAATATATAT 120
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      ATCTATAGCCTTTGTCCAATAGAAGGATTGAGCATTTGCTTTCCCGTGTCATCTTTGTGA 180
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      AGCAAAGCGATCGATGGAGGCGCGAGTGCTTGTGTTGGTGACCATGGCGATCGCCGCCGC 240
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      GTGCTGGGCCACCGGCGGCGTGGCCGCGGCGGCGACGGCGGCGACGACGACGACGACGTC 300
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      CCGCCTCAAGGGCCTGCGCGTGCACCTGACGCACGTGGACGCGCACGGCAACTACTCGAG 360
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      GCACCAGCTGCTGCGGCGGGCGGCGCGGCGGAGCCACCACCGCATGTCGAGGCTGGTCGC 420
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      GCGGGCCACCGGCGTGCCGATGACGTCGAGCAAGGCGGCCGGCGGCGGGGACCTGCAGGT 480
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      GCCGGTGCACGCCGGGAACGGCGAGTTCCTGATGGACGTGTCCATCGGCACGCCGGCGCT 540
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      GGCCTACTCCGCCATCGTGGACACCGGCAGCGACCTCGTGTGGACGCAGTGCAAGCCGTG 600
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      CGTGGACTGCTTCAAGCAGTCGACGCCGGTGTTCGACCCGTCGTCGTCGTCCACCTACGC 660
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      CACCGTGCCGTGCTCCAGCGCCTCCTGCAGCGACCTCCCCACCTCGAAGTGCACGTCGGC 720
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      GTCCAAGTGCGGCTACACCTACACCTACGGCGACTCCTCGTCGACGCAGGGCGTCCTCGC 780
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      CACGGAGACGTTCACGCTGGCCAAGTCGAAGCTCCCGGGCGTCGTCTTCGGCTGCGGCGA 840
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      CACCAACGAGGGCGACGGGTTCTCCCAGGGCGCCGGGCTCGTCGGCCTCGGCCGCGGCCC 900
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      GCTCTCGCTGGTGTCCCAGCTCGGCCTGGACAAGTTCTCCTACTGCCTCACCTCCCTCGA 960
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      CGACACCAACAACAGCCCGCTCCTCCTCGGCTCCCTCGCCGGCATCTCCGAGGCCTCCGC 1020
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      CGCCGCGTCGTCGGTGCAAACCACGCCTCTGATCAAGAACCCGAGCCAGCCATCCTTCTA 1080
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      CTACGTGTCCCTCAAGGCCATCACCGTCGGGTCGACGCGGATCAGCCTCCCGAGCTCGGC 1140
consensus_9044#1      --------CCCTCAAG-CCATCACC-TCGGGTCGACGCGGATCACCCTCCCGAGCTTCGC 50
consensus_9044#2      -------------------------------------------CCCCACNGGATCTATAG 17
                                                                   ** *  ** **    

consensus_9044#0      GTTC-GCCGTCCAGGACGACGGCACGGGCGGCGTCATCGTGGACTCCGGCACGTCGATCA 1199
consensus_9044#1      NTTCCGCCGTCCAGGACGACGGCACGGNCGGCTTCATCGTGGACTCCGGCACNTCGATCA 110
consensus_9044#2      CCTTTGTCCAATAGAAGGATTGAGCATTTG-CTTTCCCGTGTCNTCTTTGTGAACAAACC 76
                        *  * *    ** * **  *  *    * * *   ****   **        * * * 

consensus_9044#0      CCTACCTGGAGGTGCAGGGGTACCGCGCCCTGAAGAAGGCGTTCGCGGCGCAGATGGCGC 1259
consensus_9044#1      CCTACCTGGAGGTGCAGGGGTACCGCGCCCTGAAGAAGGCGTTCTCGGCGCAGATGGCGC 170
consensus_9044#2      NATCNATGGAGGCNCNAGTG--------CTTG----------TNTTGGTGACCATGGCAA 118
                        *   ******  *  * *        * **          *   ** *   *****  

consensus_9044#0      TGCCGGCGGCGGACGGGTCGGGCGTCGGGCTCGACCTGTGCTTCCGGGCGCCGGCCAAGG 1319
consensus_9044#1      TNCCGGCGGCGGACGGNTCGGGCGTCGGGCTCGACCTGTGCTTCCGGGCGCCGGCCAAGG 230
consensus_9044#2      TCGCCNCCNCNTGCTGGGCCACCGGCGGGCNTGGCCCCGGCGGC--AACGGCGGC-AACA 175
                      *  *  *  *   * *  *   ** *****  * **   **  *    ** **** **  

consensus_9044#0      GCGTGGACCAGGTGGAGGTGCCGAGGCTGGTGTTCCACTTCGACGGCGGCGCCGACCTGG 1379
consensus_9044#1      GCNTGGACCAGGTGGAGGTGCCGAGGCTGGTGTTCCA-TTCGANG-CGGCGCCGACCTGG 288
consensus_9044#2      ACAACAANAAANTCCCNCCNCAGGGGCGGGCGCGTGCNCCTGANCCCNNTGACNCCCCGG 235
                       *    *  *  *       * * *** ** *         **   *   * *  ** **

consensus_9044#0      ACCTGCCGGCGGAGAACTACATGGTGCTCGACGGCGGCTCC-GGCGCGCTGTGCCTCACG 1438
consensus_9044#1      AC-TGCCGGCGGAGAACTACATGGTGCTCGACGGCGGCTCCCGGCGCGCTGTGCCTCACG 347
consensus_9044#2      GNACTNCNCAAGGNNCCNNTTCTTTNCGGGGGGGGGGGGGCCGGNGGANANNNCCNCCCC 295
                            *    *    *       * *  *  ** **   * ** *       ** * * 

consensus_9044#0      GTGATGGGCTCCCGGGGGCTCTCCATCATCGGCAACTTCCAGCAGCAGAATTTCCAGTTC 1498
consensus_9044#1      GTGATGGGCTCCCGGGGGCTCTCCATCATCGGCAA-TTCCAGCAGCAGAATTTCCAGTTC 406
consensus_9044#2      NTTTTTTAGGGNNGGTCNCNCCGGGCCNCCGGNTTGCCCAANAAANTTNANTTTTGTTTT 355
                       *  *        **   * *     *  ***      * *  *     * **    ** 

consensus_9044#0      GTGTACGACGTCGGCCACGACACGCTCTCCTTCGCGCCCGTGCAGTGCAACAAGTTGTGA 1558
consensus_9044#1      GTGTACGACGTCGGCCACGACACGCTCTC-TTCGCGCCCGTGCAGTGCAACAAGTTGTGA 465
consensus_9044#2      NNG---GNGGGGGGGNACNCCAGGTGCCNGGTGCCCCCCGGGNAACGGG----------- 401
                        *   *  *  **  **  ** *  *    *  * **** * *  *             

consensus_9044#0      CGCTCGCCCGTGCCCGCGTAGGCGTACGTGCTCCGTGTTACGTGAGTCGTGATGTATACG 1618
consensus_9044#1      CGCTCGCCCGTGCCCGCGTAGGCGTACGTGCTCCGTGTTACGTGAGTCGTGATGTATACG 525
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      CGTACTTGTGTATGTACGATGCACTTTGTACTAGTAGTACTCATCTAACAGGACGGATAG 1678
consensus_9044#1      CGTACTTGTGTATGTACGATGCACTTTGTACTAGTAGTACTCATCTAACAGGACGGATAG 585
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      ACGAATATGCGTTCAACACCGATCGATCATCGATGTAATTATTATCGAATTGTTCATTTG 1738
consensus_9044#1      ACGAATATGCGTTCAACACCGATCGATCATCGATGTAATTATTATCGAAAAAAAAAAAA- 644
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      TTTGGTATGGTTCGGGAACTACTACGTTCTGGCCTTCTGGGAAGCATTGGTTATTGGGGG 1798
consensus_9044#1      ------------------------------------------------------------
consensus_9044#2      ------------------------------------------------------------
                                                                                  

consensus_9044#0      AAAAAATAGCAAGAGAACTCGTTTCTCATTTTCAGTAAAAAAAA 1842
consensus_9044#1      --------------------------------------------
consensus_9044#2      --------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)