|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9045#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1952 fasta sequence
[CACGGCCGCGGAGCCGCGCGCCGCCGCGCCGGCGTTCGCGATGGCGCAGTGCCGCCCCTACGTCACGCGCGGGGACTGCGTCGCGTGCTTCGACGCCGCGGCCACGCTCCTCCGCGCCGCCTGCGGCGCTGCCAACGGCGGGCGCGCCATTCTCGACGGCTGCGTCGTGAGGTACGAGAGCGCGGCCTTCTTCGACCAGGCCACGCTCCCCGGGAACACGCAGGTGTGCAACGGCTCCGCTGTCGCCGGCGGCGGGTTCGCGGACGCGGCGCGGGGGCTGGTCGGTGACCTCGTGGCTGCCGTGCCTCGCGCCCTGGGGCTCGCCGCGGCGGCCGCGGGCGCCGGCGTGTACGCCGCGGCGCAGTGTGTGGTGACGGTCGGGGAGGGTGGCTGCGCGCAGTGCCTGGAGGTGGCCGTGAGGAACATCGACGGGTGCCCGCCCAATTCCGACGGCCGCGCCGTCGACGCCGGCTGCTTCATGAGGGAAATCAGATCGGAAAGGAGCCATCATAGGAGGAATTTTAGGAGGTGTGGCCTTCCTGTTCCTTCTTGGTCTATTAGCTTTCTTGTGGACCTGGCGGTCTAGGAAGCTGTTGAAGCCTCGTAGAGGAGATATACTTGGAGCAACAGAACTGCAGGGTCCAACAAGTTTTTACTATCAAGATCTGAAGGTTGCAACCAATAATTTCTGTGAGGAAAGCAAACTTGGAGAAGGGGGTTTTGGAGATGTATTTAAGGGTTTGCTGAAAAATGGAAAAACTGTAGCTGTAAAACGGTTGACAGTGATGGAAACTAGCAGGGCCAAAGCAGATTTTGAAAGTGAAGTGAAGTTGATTAGCAATGTTCATCATCGGAATCTTGTCAGGCTTCTTGGTTGCTCTAGCAAGGGCTCGGAATGCCTGCTTGTTTATGAATACATGGCAAATGGAAGCCTCGACAAGTTCCTCTTCGGTGATAAACGTGGTACGCTTAATTGGAAGCAACGATTTAACATCATCGTTAGCATGGCTCGTGGCCTTGGATATCTTCATCAAGAATTTCATGTCTGCATCATACACCGTGACATTAAATCTAGCAATGTTCTTCTTGATGATGAGTTTCAGCCAAAGATTGCTGATTTCGGTTTAGCAAGGCTCCTACCTGATGATCATAGTCATCTCAGCACTAAATTTGCAGGAACATTGGGTTACACAGCTCCTGAATATGCCATCCATGGGCAACTCTCTGAGAAGGTTGACACATACAGCTTTGGTGTTGTCGTTTTGGAAATAATAAGTGGCAGGAAGCTCAATGATGCAAGGCTGGATCCTGATAGCCAGTACCTACTTGAATGGGCCTGGAAGCTTTATGAAAACAACAACTTGATTGAATTGGTGGATAAATCATTAGACCCAAAAGAATATAATCCTGAAGAGGTGAAAAAAATAATACAGATAGCCCTTCTCTGCACTCAATCAGCTGTTGCTTCACGTCCAACGATGTCAGAGGTAGTTGTGTTGTTGCTGACCAAAAATTCTTCAGAGTTCCAGCCCACTAGGCCTACTTTTATTGATGCAATAAGTAGAGTACGAGGTGAAACATCCTCCTCCAGTTCATCTTCTGCATCCAAGGCCACTATTTCGATAACACAGTATTCAGCCAGGTAAAAAAAAGTTGTATATGATGTGCTTCTCTTTTTTTTTGTAACTTCTATATTTGTATCTGTATCTTTGTTTTATGCAGCAACAAGTGGATGTTTACTTGTGAGCATAAACAAAAACAGTGTAAATCATCTGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCCATGTAACTATGAGTCCCATAGCATTTGTCCTTGTAACTGTTCTCAGACAAATCACTGCACTCCTTGTATGCTCGGATCATATTTGAGTGAAAATTTGAAA]
[+] EMBL AK120835 [CACGGCCGCGGAGCCGCGCGCCGCCGCGCCGGCGTTCGCGATGGCGCAGTGCCGCCCCTACGTCACGCGCGGGGACTGCGTCGCGTGCTTCGACGCCGCGGCCACGCTCCTCCGCGCCGCCTGCGGCGCTGCCAACGGCGGGCGCGCCATTCTCGACGGCTGCGTCGTGAGGTACGAGAGCGCGGCCTTCTTCGACCAGGCCACGCTCCCCGGGAACACGCAGGTGTGCAACGGCTCCGCTGTCGCCGGCGGCGGGTTCGCGGACGCGGCGCGGGGGCTGGTCGGTGACCTCGTGGCTGCCGTGCCTCGCGCCCTGGGGCTCGCCGCGGCGGCCGCGGGCGCCGGCGTGTACGCCGCGGCGCAGTGTGTGGTGACGGTCGGGGAGGGTGGCTGCGCGCAGTGCCTGGAGGTGGCCGTGAGGAACATCGACGGGTGCCCGCCCAATTCCGACGGCCGCGCCGTCGACGCCGGCTGCTTCATGAGGGAAATCAGATCGGAAAGGAGCCATCATAGGAGGAATTTTAGGAGGTGTGGCCTTCCTGTTCCTTCTTGGTCTATTAGCTTTCTTGTGGACCTGGCGGTCTAGGAAGCTGTTGAAGCCTCGTAGAGGAGATATACTTGGAGCAACAGAACTGCAGGGTCCAACAAGTTTTTACTATCAAGATCTGAAGGTTGCAACCAATAATTTCTGTGAGGAAAGCAAACTTGGAGAAGGGGGTTTTGGAGATGTATTTAAGGGTTTGCTGAAAAATGGAAAAACTGTAGCTGTAAAACGGTTGACAGTGATGGAAACTAGCAGGGCCAAAGCAGATTTTGAAAGTGAAGTGAAGTTGATTAGCAATGTTCATCATCGGAATCTTGTCAGGCTTCTTGGTTGCTCTAGCAAGGGCTCGGAATGCCTGCTTGTTTATGAATACATGGCAAATGGAAGCCTCGACAAGTTCCTCTTCGGTGATAAACGTGGTACGCTTAATTGGAAGCAACGATTTAACATCATCGTTAGCATGGCTCGTGGCCTTGGATATCTTCATCAAGAATTTCATGTCTGCATCATACACCGTGACATTAAATCTAGCAATGTTCTTCTTGATGATGAGTTTCAGCCAAAGATTGCTGATTTCGGTTTAGCAAGGCTCCTACCTGATGATCATAGTCATCTCAGCACTAAATTTGCAGGAACATTGGGTTACACAGCTCCTGAATATGCCATCCATGGGCAACTCTCTGAGAAGGTTGACACATACAGCTTTGGTGTTGTCGTTTTGGAAATAATAAGTGGCAGGAAGCTCAATGATGCAAGGCTGGATCCTGATAGCCAGTACCTACTTGAATGGGCCTGGAAGCTTTATGAAAACAACAACTTGATTGAATTGGTGGATAAATCATTAGACCCAAAAGAATATAATCCTGAAGAGGTGAAAAAAATAATACAGATAGCCCTTCTCTGCACTCAATCAGCTGTTGCTTCACGTCCAACGATGTCAGAGGTAGTTGTGTTGTTGCTGACCAAAAATTCTTCAGAGTTCCAGCCCACTAGGCCTACTTTTATTGATGCAATAAGTAGAGTACGAGGTGAAACATCCTCCTCCAGTTCATCTTCTGCATCCAAGGCCACTATTTCGATAACACAGTATTCAGCCAGGTAAAAAAAAGTTGTATATGATGTGCTTCTCTTTTTTTTTGTAACTTCTATATTTGTATCTGTATCTTTGTTTTATGCAGCAACAAGTGGATGTTTACTTGTGAGCATAAACAAAAACAGTGTAAATCATCTGAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCCATGTAACTATGAGTCCCATAGCATTTGTCCTTGTAACTGTTCTCAGACAAATCACTGCACTCCTTGTATGCTCGGATCATATTTGAGTGAAAATTTGAAA]
consensusID : consensus_9045#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1677 fasta sequence
[GCACCGGGGCTCGCCGCGGCGGCCGCTCGCGGCGGCGTGTACGCGGCGGCGCAGTGCGTGGAGACGGTCGGGGAGGGCGGGTGCGAGCAGTGCCTGGCGGTGGCGGCGAGGAACATCGACGGGTGCCCGCCGGACTCCGACGGCCGCGCCGTGGACGCCGGCTGCTTCATGAGGTACTCCGACAAGCCGTTCTTCCCGGCGAACGCGACCATAGACCTGGCGCCATACTTGCGATCACCTGGGAAATCAAATCACAAAGGAGCCATCATAGGAGGAATTTTAGGAGGTGTGGCATTCCTGCTCCTTGGCCTATTGGCACTCTTCTGGACCAGGCAGTCTAAGAAGCCGTTGAAGCCTCGTAGAGGAGATATTCTTGGAGCAACAGAACTGCAGGGTCCAACAAGTTTTTACTATAAAGATCTAAAGGTTGCAACCAATAATTTCAGTGAGCAAAGCAAACTTGGAGAAGGGGGATTTGGAGATGTATTTAAGGCTTCGCTGAAAAATGGGAAAACTGTAGCTGTAAAACGGTTAACAGTTATGGAAACTAGCAGGGCCAAAGCAGATTTTGAAAGTGAAGTGAAGTTGATTAGCAATGTTCATCATCGGAATCTTGTCCGGCTTCTTGGTTGCGCAAGCAAGGGCTCAGAATGCCTGCTTGTTTATGAATACATGGC-AAATGGAAGCCTTGATAAGTTCCTCTTTGGCGAGAAAAGTGTCGCCCTCAATTGGAAGCAGCGATTTAATATCATTATCGGCATGGCTCGTGGCCTTGCATATCTTCATGAAGAATTCCATGTGCGCATCATACACCGTGACATTAAATCTAGCAATGTTCTTCTTGATGACGAGTCTCAACCAAAGATTGCTGATTTCGGTTTAGCAAGGCTCATACCTGATGATCATAGTCATCTCAGCACTAATTTTGCAGGAACATTGGGTTACACAGCTCCTGAGTATGCCATCCACGGGCAACTCTCAGAGAAGGTTGACACATACGGCTTTGGTGTAGTCACTTTAGAAATAATAGGTGGTAGGAAGCTCAATGATGCAAGGCTGGAGCCTGATAGCCAGTACCTGCTTGAATGGGCCTGGAAGCTTTATGAAGACAACAACTTGATTGAATTGGTGGACAGATCATTAGACCCAGAAGAATACAATCACGAGGAGGTGAAAAGAACAAT-GGAGATTG-CCCTTCTGTGCACTCAATCGGCTGTCACATCACGGCCAATGATGTCGGAGGTAG-TTGTGTTGTTGCTGACAAGAAATACTCTAGAGTTCCAGCCCACGAGACCGACTTTTATCGATGCAACTCGTAGAGTGCCAGGTGAAACATCAACCTCCAGTTCATCTTCTGCATCCAAAGCTACTGTTTCGATATCACAACTTTCAGCCAGGTGAAAGGTGTTCTAAATAAATGTGCTTATTTTGATTGTGTGTAAATGCTATTTATTTGTATATGTATCTATGTTCTTCACGTCAACAAGTGGATATTTACTTGTGAGTTGCACGTAGAACATGTGTTCTCTTTTTTTTTTCTTCTCTCTTTTCCTATTCATATAATCGCGACTTGCATGGCATTTACCATGTCTGTTCTGACACAATTATTTTGTGTATGTTTGGAACACATTGGAGTGAGAATTTGAAAAATATTGCTTTGATATTTAA-AAAAAAGGA]
[+] EMBL CB618785 [GCACCGGGGCTCGCCGCGGCGGCCGCTCGCGGCGGCGTGTACGCGGCGGCGCAGTGCGTGGAGACGGTCGGGGAGGGCGGGTGCGAGCAGTGCCTGGCGGTGGCGGCGAGGAACATCGACGGGTGCCCGCCGGACTCCGACGGCCGCGCCGTGGACGCCGGCTGCTTCATGAGGTACTCCGACAAGCCGTTCTTCCCGGCGAACGCGACCATAGACCTGGCGCCATACTTGCGATCACCTGGGAAATCAAATCACAAAGGAGCCATCATAGGAGGAATTTTAGGAGGTGTGGCATTCCTGCTCCTTGGCCTATTGGCACTCTTCTGGACCAGGCAGTCTAAGAAGCCGTTGAAGCCTCGTAGAGGAGATATTCTTGGAGCAACAGAACTGCAGGGTCCAACAAGTTTTTACTATAAAGATCTAAAGGTTGCAACCAATAATTTCAGTGAGCAAAGCAAACTTGGAGAAGGGGGATTTGGAGATGTATTTAAGGCTTCGCTGAAAAATGGGAAAACTGTAGCTGTAAAACGGTTAACAGTTATGGAAACTAGCAGGGCCAAAGCAGATTTTGAAAGTGAAGTGAAGTTGATTAGCAATGTTCATCATCGGAATCTTGTCCGGCTTCTTGGTTGCGCAAGCAAGGGCTCAGAATGCCTGCTTGTTTATGAATACATGGCAAAATGGAAGC ]
[+] EMBL CA765478 [ GATGTATTTAAGGCTTCGCTGAAAAATGGGAAAACTGTAGCTGTAAAACGGTTAACAGTTATGGAAACTAGCAGGGCCAAAGCAGATTTTGAAAGTGAAGTGAAGTTGATTAGCAATGTTCATCATCGGAATCTTGTCCGGCTTCTTGGTTGCGCAAGCAAGGGCTCAGAATGCCTGCTTGTTTATGAATACATGGC AAATGGAAGCCTTGATAAGTTCCTCTTTGGCGAGAAAAGTGTCGCCCTCAATTGGAAGCAGCGATTTAATATCATTATCGGCATGGCTCGTGGCCTTGCATATCTTCATGAAGAATTCCATGTGCGCATCATACACCGTGACATTAAATCTAGCAATGTTCTTCTTGATGACGAGTCTCAACCAAAGATTGCTGATTTCGGTTTAGCAAGGCTCATACCTGATGATCATAGTCATCTCAGCACTAATTTTGCAGGAACATTGGGTTACACAGCTCCTGAGTATGCCATCCACGGGCAACTCTCAGAGAAGGTTGACACATACGGCTTTGGTGTAGTCACTTTAGAAATAATAGGTGGTAGGAAGCTCAATGATGCAAGGCTGGAGCCTGATAGCCAGTACCTGCTTGAATGGGCCTGGAAGCTTTATGAAGACAACAACTTGATTGAATTGGTGGACAGATCATTAGACCCAGAAGAATACAATCACGAGGAGGTGAAAAGAACAATGGGAGATTGNCCCTTCTGTGCACTCAATCGGCTGTCACATCACGGCCAATGATGTCGGAGGTAGTTTGGGTTGNTGCTGACAA AAATACTCTANAGNTNCAGCCCACGAGACCGACTTTTATCGATGCAACTCGGAAAGNGCAAGGngn ]
[-] EMBL CB633345 [ GATCATAGTCATCTCAGCACTAATTTTGCAGGAACATTGGGTTACACAGCTCCTGAGTATGCCATCCACGGGCAACTCTCAGAGAAGGTTGACACATACGGCTTTGGTGTAGTCACTTTAGAAATAATAGGTGGTAGGAAGCTCAATGATGCAAGGCTGGAGCCTGATAGCCAGTACCTGCTTGAATGGGCCTGGAAGCTTTATGAAGACAACAACTTGATTGAATTGGTGGACAGATCATTAGACCCAGAAGAATACAATCACGAGGAGGTGAAAAGAACAAT GGAGATTG CCCTTCTGTGCACTCAATCGGCTGTCACATCACGGCCAATGATGTCGGAGGTAG TTGTGTTGTTGCTGACAAGAAATACTCTAGAGTTCCAGCCCACGAGACCGACTTTTATCGATGCAACTCGTAGAGTGCCAGGTGAAACATCAACCTCCAGTTCATCTTCTGCATCCAAAGCTACTGTTTCGATATCACAACTTTCAGCCAGGTGAAAGGTGTTCTAAATAAATGTGCTTATTTTGATTGTGTGTAAATGCTATTTATTTGTATATGTATCTATGTTCTTCACGTCAACAAGTGGATATTTACTTGTGAGTTGCACGTAGAACATGTGTTCTCTTTTTTTTTTCTTCTCTCTTTTCCTATTCATATAATCGCGACTTGCATGGCATTTACCATGTCTGTTCTGACACAATTATTTTGTGTATGTTTGGAACACATTGGAGTGAGAATTTGAAAAATATTGCTTTGATATTTAA AAAAAAGGA]
[-] EMBL CB618786 [ ATCCACGGGCAACTCTCAGAGAAGGTTGACACATACGGCTTTGGTGTAGTCACTTTAGAAATAATAGGTGGTAGGAAGCTCAATGATGCAAGGCTGGAGCCTGATAGCCAGTACCTGCTTGAATGGGCCTGGAAGCTTTATGAAGACAACAACTTGATTGAATTGGTGGACAGATCATTAGACCCAGAAGAATACAATCACGAGGAGGTGAAAAGAACAAT GGAGATTG CCCTTCTGTGCACTCAATCGGCTGTCACATCACGGCCAATGATGTCGGAGGTAG TTGTGTTGTTGCTGACAAGAAATGCTCTAGAGTTCCAGCCCACGAGACCGACTTTTATCGATGCAACTCGTAGAGTGCCAGGTGAAACATCAACCTCCAGTTCATCTTCTGCATCCAAAGCTACTGTTTCGATATCACAACTTTCAGCCAGGTGAAAGGTGTTCTAAATAAATGTGCTTATTTTGATTGTGTGTAAATGCTATTTATTTGTATATGTATCTATGTTCTTCACGTCAACAAGTGGATATTTACTTGTGAGTTGCACGTAGAACATGTGTTCTC TTTTTTTTTCTTCTCTCTTTTCCTATTCATATAATCGCGACTTGCATGGCATTTACCATGTCTGTTCTGACACAATTATTTTGTGTATGTTTGGAACACATTTGAGTGAGAATTTGAAAAATATTGCTTTGAAAAAAAACAAAAAAGa ]
consensusID : consensus_9045#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 392 fasta sequence
[GCTCGCCGGAGCGGCGAGGCGGTGCAACATGGATCGTCTCCTGCTCGCGCCGTCTGCGGTGGCGCTGCTGGTGGTTGCCTCGGCGTGGGTTCCGGCCGCCGCTGACCCGCAGATCACGCTGCTCAACCTGGGGTGCAGCCAGTACAACGCGACACCGGCCGCCGCCTTCCTCGCCGCCCTCAACGCCACCTTCGCCGTGCTCCGCGCCAACCTGTCGTCGGCTGGTGGCGGTGGTGGCTTCCCCACGGCGGCCGAGCCGCGCGCCGCCGCGCCGGCGTTCGCGATGGAGCAGTGCCGCCCGTACGTCGCGGGGACGGGCAGCTGCGCCGCGTGCTTCAACGCCGCGGCGTCGCGCCTCCGCGCCAGGTGCTGCGCCGCCAACGGCGGGCGCG]
[+] EMBL CB633344 [GCTCGCCGGAGCGGCGAGGCGGTGCAACATGGATCGTCTCCTGCTCGCGCCGTCTGCGGTGGCGCTGCTGGTGGTTGCCTCGGCGTGGGTTCCGGCCGCCGCTGACCCGCAGATCACGCTGCTCAACCTGGGGTGCAGCCAGTACAACGCGACACCGGCCGCCGCCTTCCTCGCCGCCCTCAACGCCACCTTCGCCGTGCTCCGCGCCAACCTGTCGTCGGCTGGTGGCGGTGGTGGCTTCCCCACGGCGGCCGAGCCGCGCGCCGCCGCGCCGGCGTTCGCGATGGAGCAGTGCCGCCCGTACGTCGCGGGGACGGGCAGCTGCGCCGCGTGCTTCAACGCCGCGGCGTCGCGCCTCCGCGCCAGGTGCTGCGCCGCCAACGGCGGGCGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9045#0 CACGGCCGCGGAGCCGCGCGCCGCCGCGCCGGCGTTCGCGATGGCGCAGTGCCGCCCCTA 60
consensus_9045#1 ------------------------------------------------------------
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 CGTCACGCGCGGGGACTGCGTCGCGTGCTTCGACGCCGCGGCCACGCTCCTCCGCGCCGC 120
consensus_9045#1 ------------------------------------------------------------
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 CTGCGGCGCTGCCAACGGCGGGCGCGCCATTCTCGACGGCTGCGTCGTGAGGTACGAGAG 180
consensus_9045#1 ------------------------------------------------------------
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 CGCGGCCTTCTTCGACCAGGCCACGCTCCCCGGGAACACGCAGGTGTGCAACGGCTCCGC 240
consensus_9045#1 ------------------------------------------------------------
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 TGTCGCCGGCGGCGGGTTCGCGGACGCGGCGCGGGGGCTGGTCGGTGACCTCGTGGCTGC 300
consensus_9045#1 ------------------------------------------------------------
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 CGTGCCTCGCGCCCTGGGGCTCGCCGCGGCGGCCGCGGGCGCCGGCGTGTACGCCGCGGC 360
consensus_9045#1 ----------GCACCGGGGCTCGCCGCGGCGGCCGCTCGCGGCGGCGTGTACGCGGCGGC 50
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 GCAGTGTGTGGTGACGGTCGGGGAGGGTGGCTGCGCGCAGTGCCTGGAGGTGGCCGTGAG 420
consensus_9045#1 GCAGTGCGTGGAGACGGTCGGGGAGGGCGGGTGCGAGCAGTGCCTGGCGGTGGCGGCGAG 110
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 GAACATCGACGGGTGCCCGCCCAATTCCGACGGCCGCGCCGTCGACGCCGGCTGCTTCAT 480
consensus_9045#1 GAACATCGACGGGTGCCCGCCGGACTCCGACGGCCGCGCCGTGGACGCCGGCTGCTTCAT 170
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 GAGG-------------------------------------------------------- 484
consensus_9045#1 GAGGTACTCCGACAAGCCGTTCTTCCCGGCGAACGCGACCATAGACCTGGCGCCATACTT 230
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 ------------GAAATCAGATCGGAAAGGAGCCATCATAGGAGGAATTTTAGGAGGTGT 532
consensus_9045#1 GCGATCACCTGGGAAATCAAATCACAAAGGAGCCATCATAGGAGGAATTTTAGGAGGTGT 290
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 GGCCTTCCTGTTCCTTCTTGGTCTATTAGCTTTCTTGTGGACCTGGCGGTCTAGGAAGCT 592
consensus_9045#1 GGCATTCCTGCTCC---TTGGCCTATTGGCACTCTTCTGGACCAGGCAGTCTAAGAAGCC 347
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 GTTGAAGCCTCGTAGAGGAGATATACTTGGAGCAACAGAACTGCAGGGTCCAACAAGTTT 652
consensus_9045#1 GTTGAAGCCTCGTAGAGGAGATATTCTTGGAGCAACAGAACTGCAGGGTCCAACAAGTTT 407
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 TTACTATCAAGATCTGAAGGTTGCAACCAATAATTTCTGTGAGGAAAGCAAACTTGGAGA 712
consensus_9045#1 TTACTATAAAGATCTAAAGGTTGCAACCAATAATTTCAGTGAGCAAAGCAAACTTGGAGA 467
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 AGGGGGTTTTGGAGATGTATTTAAGGGTTTGCTGAAAAATGGAAAAACTGTAGCTGTAAA 772
consensus_9045#1 AGGGGGATTTGGAGATGTATTTAAGGCTTCGCTGAAAAATGGGAAAACTGTAGCTGTAAA 527
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 ACGGTTGACAGTGATGGAAACTAGCAGGGCCAAAGCAGATTTTGAAAGTGAAGTGAAGTT 832
consensus_9045#1 ACGGTTAACAGTTATGGAAACTAGCAGGGCCAAAGCAGATTTTGAAAGTGAAGTGAAGTT 587
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 GATTAGCAATGTTCATCATCGGAATCTTGTCAGGCTTCTTGGTTGCTCTAGCAAGGGCTC 892
consensus_9045#1 GATTAGCAATGTTCATCATCGGAATCTTGTCCGGCTTCTTGGTTGCGCAAGCAAGGGCTC 647
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 GGAATGCCTGCTTGTTTATGAATACATGGCAAATGGAAGCCTCGACAAGTTCCTCTTCGG 952
consensus_9045#1 AGAATGCCTGCTTGTTTATGAATACATGGCAAATGGAAGCCTTGATAAGTTCCTCTTTGG 707
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 TGATAAACGTGGTACGCTTAATTGGAAGCAACGATTTAACATCATCGTTAGCATGGCTCG 1012
consensus_9045#1 CGAGAAAAGTGTCGCCCTCAATTGGAAGCAGCGATTTAATATCATTATCGGCATGGCTCG 767
consensus_9045#2 ------------------------------------------GCTCGCCGGAGCGGC--G 16
* * *** *
consensus_9045#0 TGGCCTTGGATATCTTCATCAAGAATTTCATGTCTGCATCATACACCGTGACATTAAATC 1072
consensus_9045#1 TGGCCTTGCATATCTTCATGAAGAATTCCATGTGCGCATCATACACCGTGACATTAAATC 827
consensus_9045#2 AGGCGGTGCAA-----CATGGATCGTCTCCTGCTCGCGCCGTCTGCGGTGGCG------C 65
*** ** * *** * * * ** ** * * * *** * *
consensus_9045#0 TAGCAATGTTCTTCTTGATGATGAGTTTCAGCCAAAGATTGCTGATTTCGGTTTAGCAAG 1132
consensus_9045#1 TAGCAATGTTCTTCTTGATGACGAGTCTCAACCAAAGATTGCTGATTTCGGTTTAGCAAG 887
consensus_9045#2 TGCTGGTGGTTGCCTCGGCG-TGGGTTCCGGCCG----CCGCTGACCCGCAGATCACGCT 120
* ** * ** * * * ** * ** ***** * *
consensus_9045#0 GCTCCTACCTGATGATCATAGTCATCTCAGCACTAAATTTGCAGGAACATTGGGTTACAC 1192
consensus_9045#1 GCTCATACCTGATGATCATAGTCATCTCAGCACTAATTTTGCAGGAACATTGGGTTACAC 947
consensus_9045#2 GCTCA-ACCTGGGG--TGCAGCCAGTACAACGCGACACCGGCCGCCGCCTT---CCTCGC 174
**** ***** * ** ** ** * * * ** * * ** * *
consensus_9045#0 AGCTCCTGAATATGCCATCCATGGGCAACTCTCTGAGAAGGTTGACACATACAGCTTTGG 1252
consensus_9045#1 AGCTCCTGAGTATGCCATCCACGGGCAACTCTCAGAGAAGGTTGACACATACGGCTTTGG 1007
consensus_9045#2 CGCCCTCAACGCCACCTTCGCCGTGCTCCGCGCCAACCTGTCGTCGGCTGGTGGCGGTGG 234
** * * ** ** * ** * * * * * * ** ***
consensus_9045#0 TGTTGTCGTTTTGGAAATAATAAGTGGCAGGAAGCT-CAATGATGCAAG-GCTGGATCCT 1310
consensus_9045#1 TGTAGTCACTTTAGAAATAATAGGTGGTAGGAAGCT-CAATGATGCAAG-GCTGGAGCCT 1065
consensus_9045#2 TGGCTTCCCCACGGCGGC--CGAGCCGCGCGCCGCCGCGCCGGCGTTCGCGATGGAGCAG 292
** ** * * * * ** * * * * * **** *
consensus_9045#0 GATAGCCAGTACCTACTTGAATGGGCCTGGAAGCTTTATGAAAACAACAACTTGATTGAA 1370
consensus_9045#1 GATAGCCAGTACCTGCTTGAATGGGCCTGGAAGCTTTATGAAGACAACAACTTGATTGAA 1125
consensus_9045#2 TGCCGCCCGTACGT-CGCG---GGGACGGGCAGCTGCGC-----CGCGTGCTTCAACGCC 343
*** **** * * * *** * ** **** * *** * *
consensus_9045#0 TTGGTGGATAAATCATTAGACCCAAAAGAATATAATCCTGAAGAGGTGAAAAAAATAATA 1430
consensus_9045#1 TTGGTGGACAGATCATTAGACCCAGAAGAATACAATCACGAGGAGGTGAAAAGAACAATG 1185
consensus_9045#2 GCGGCGT-CGCGCCTCCGCGCCAGGTGCTGCGCCGCCAACGGCGGGCGCG---------- 392
** * * ** * ** *
consensus_9045#0 CAGATAGCCCTTCTCTGCACTCAATCAGCTGTTGCTTCACGTCCAACGATGTCAGAGGTA 1490
consensus_9045#1 GAGATTGCCCTTCTGTGCACTCAATCGGCTGTCACATCACGGCCAATGATGTCGGAGGTA 1245
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 GTTGTGTTGTTGCTGACCAAAAATTCTTCAGAGTTCCAGCCCACTAGGCCTACTTTTATT 1550
consensus_9045#1 GTTGTGTTGTTGCTGACAAGAAATACTCTAGAGTTCCAGCCCACGAGACCGACTTTTATC 1305
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 GATGCAATAAGTAGAGTACGAGGTGAAACATCCTCCTCCAGTTCATCTTCTGCATCCAAG 1610
consensus_9045#1 GATGCAACTCGTAGAGTGCCAGGTGAAACATCAACCTCCAGTTCATCTTCTGCATCCAAA 1365
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 GCCACTATTTCGATAACACAGTATTCAGCCAGGTAAAAAAAAGTTGTATATGA-TGTGCT 1669
consensus_9045#1 GCTACTGTTTCGATATCACAACTTTCAGCCAGGTGAAAGGT-GTTCTAAATAAATGTGCT 1424
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 TCTCTTTTTTTT-TGTAACTTCTAT--ATTTGTATCTGTATCTTTGTTTTATGCAGCAAC 1726
consensus_9045#1 TATTTTGATTGTGTGTAAATGCTATTTATTTGTATATGTATCTATGTTCTTCACGTCAAC 1484
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 AAGTGGATGTTTACTTGTGAGCATAAACAAAAACAGTGTAAATCATCTGAAATCTCTCTC 1786
consensus_9045#1 AAGTGGATATTTACTTGTGAGT-TGCAC---------GTAGAACATGTGTTCTCTTTTTT 1534
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 TCTCTCTCTCTCTCTCTCTCTCTCTCTC-TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 1845
consensus_9045#1 TTTTCTTCTCTCTTTTCCTATTCATATAATCGCGACTTGCATGGCATTTACCATGTCTGT 1594
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 CTCGTCCATGTAACTATGAGTCC-CATAGCATTTGTCCTTGTAACTGTTCTCAGACAAAT 1904
consensus_9045#1 TCTGACACAATTATTTTGTGTATGTTTGGAACACATTGGAGTGAGAATT-TGAAAAATAT 1653
consensus_9045#2 ------------------------------------------------------------
consensus_9045#0 CACTGCACTCCTTGTATGCTCGGATCATATTTGAGTGAAAATTTGAAA 1952
consensus_9045#1 TGCTTTGATATTTAAAAAAAAGGA------------------------ 1677
consensus_9045#2 ------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||