These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9062#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3081 fasta sequence [CCCCAACGGAGGAGGAAGGGAAGAAGGGAGGAAACCCTAAAATTCCTCTTCTCCTTCTGCTCTCGATTCGATTCGATCTCGTCGCCACGCCCCCGCCCCCGCCCCCGCCCCGCCCCGCAAGCCGCCGATCTGTTGCGCCTCGTCAAGACCCCCCAGCCCAAGATCTGATTCGTTTCGATTCCGAGCTGAGCAGCAGCAGGAGCAGGAGGAGGAGGAGGAGCTCATCGATTTGGTGGTTGCTGATGGGCGGCGCATCCATGTTGGATGAGGAAGCGCACTGCATCTGATCGCATTCGGGTCCCCTCCAGCAACCCCGCGCCATCGCCGTCGCCGCCGCCGCCGCCGCCGCCGCCGGAGGAACCTGCCGTGCCCATGCCGCATGTTGGGGCCCGCCGCTCCACGCGCGTCTTCGTGCCCAAGACGCCCAGGCCGCCTCAGCCTTCTGATCCTGCCAGGGTCCTCCGCTCCGGCAAGCGCCTCGCCTTCTCCGAATCCCCCGCCGACGCCCACTGGTTCCAGTGCAAGCCCAACAACTGCTTCCACGTCCATGACCACCAACGCCAACTTCACGACGACCCCAAGCCACCGCCGCCGCCTCTGCCGCGCACAAGGTCCTTCGGGATCGTCTACAGCAGGAAGCGCCGCCGCCGCCTCCCCGAACCCAAGGAGGACACCAGGTTTGCCATTGTCTTCACTAGGAAGAGACCCAAGGTCGCCCCTTTTCAGCACCACGCCCCGAACGACCTTGCCACCATCCCATGCTCCTCTTCCAGGGAGTTTGCCTCCAGGACTGGCTTCTTTGATTCCCATTTCTTGACCCTGGTGGATTGTATTCCCACTAATAAAGCTGACGCTGCCATGCTTATTGTCCTTGTGGATTCATCTTGCTCTGGGAGCTCTCAGCACTTCTTGCGCCTCCTCCTCTCTGTGCTGCGCTGGATGCGTAGCTGCCGACGGGGCAAGGTCCGAAACCTTGCCTCCTTTCTCTCGTCCGATGCTGTCGCCACTGCGCTTGCATTGCGGGGATTGCATTTTGTCCAGCTTCAATGCCGGAGAGACTGTGCATTGTCACAGAGGGCTTTGGTGCAATGTGGCTGGTGTGAGCTTCGTGGTGCCAAGGATTCTGAACCATTGTTGTCTGTCAATTTCTTGGCAGTCCCTTCTTACTTCCAGATTTTGCACTTGTTAATAGCACTCGAGTCAATGTATCTTCCAGCTGTGATTCGTACGAGAATGCATTTGGTTGGTGGAGCTGAAGAAATTTATCCTCGCACCCTATTGGAGGAGGATTCTGAATCTCTGAGCACTGGGGATACTGATCCTGCTGTTGACCTGTGTAGCAACAAACTTTGCAGTGTGGCTCAAGATTATGTGCCCCTTGAAGAGATTGCAGGAGTGGTGGTCCATGGTCTGAGGCTAAAGAAGCATCAAAGGAAGAGAAGCTCTATGCGGCATCCCCTCAGTCGACAGCGTCTTGCTGCAAGATTTCCCGACAAGGTAGTTGCAACAAACCAGACCGATGTGGCTAGACAGACAGAAGCGGATGCGCCACCCTCAGTTAGTCCGGAGCTTCCACTGGAGCCTGTCAAACCTAAAGCAGCACTGGAAATCTCTCTTGATTTGCTTGAAAACATGGATGACAGTGATGTTTCAACTCCTATAGGATCAAATGGGAAGCAAAAGAGGTCTTCTTTGAAAAGTCCCATTGAGCGCATGAATGAAAGGTTGGCTTTGGCTGAGGTTAGACAGAATATAGATTCTGTTCACTGCAGAGCAAACCTTTTAATTATTCAACCTGATAGGTGCTGGAGGGAAGAAGGCGCTGAAGTTATGCTGGAACCATCGGAATCAAATGAGTGGTGTATAGCTGTGAAGATACATGGTGTCAATAGAATATCTCTGAAGCCTTCGGAGCAGAGGTTTTATGTTGTTAACCGGTTCACCCATGCCTATATTTTGGCAGTTGATGATGGATTGAAGATTGAGTTCTCTGATAAATGGGACTGGCTTTTGTTTAAGGAGTTGCAAATTGAGGGTCGGGAGCGCAATTCCCAGGGAAAGATGATACCAATTCCTGGTGTAAATGAGGTTTCTGATGACATGGGAGTGATTGGAACATATCCTTTTTCACGCCCTGTGCCAGACTATATCAGAATGGCGGATGATGAGGTTGGGCGAGCTCTCTCAAGGGACTCTGTATATGATCTGGATTCTGAGGATGAACAGTGGCTCACCCAGTTGAATCATTCAGATTCTGACAGAAAAAGCGCACATCTTAATCATATTTCTTATGAAGATTTTGAAAAGATGATTACCACGTTTGAAAAGGATGCTTTCAACAACCCTGAAGGAACTAGTGATTTGGATCAGATTCTTTCCAGATACCCTACTTTGGAAAAGGACCATAATGTCCTTGCTGTGCATGAATATTGGATAAACAAGAGATATAAGAAAGGTGTACCACTGCTAAGGATATTGCAGGGTGCAACACTAAGACGAGGACAACTGTCACAAAGATCTATTAAGAAAAAAAGATCTTTCAAGAGACA-AAGAAGCCAAGCTGGCCGTGGAAAGCCTGACATATGCTTGCAAGATGCTAATGGTGCTGAAGAGGAGGCTTTGCGGAGAGTTGTGGAAGCCGAACGTGCTGCAACACAGGCAGGAGAAACAGCTGTTCGTCTGCGCAGTAGAGCTCAGCGTCTCATGGCAAAGGCTGAGCTGGTGGCATACAAATCTATTATGGCCCTCAGGATTGCTGAGGCTGCTAGGATATCTGACTCGTCACGGGATCTTGTTTTGACGACCCTCGACTAGTGAAGAATGTGAGTGAGATGTTCATTGATTTGTGTGAAGAGCATAGTAGCCAATAGTTTGTTTTCCTCTTTTTTGCCGCATCATTTCAATGCTACGTGGTATTTGGCTTTCGGGTAAGCTGTGGGCTGTGGGTCTCTTTTTTCCTCCCCACCTGTTTTAACTTTGTGAAGCCAATCTTTGTAGCGGATGCTTGAACTCAACTGTAATCTCTTGTGTACATGATAGTGGTTAGTTAGA-TTGTGGTGTATCTTTTCTGTAAAAAAAAAA] [+] EMBL AK121311 [CCCCAACGGAGGAGGAAGGGAAGAAGGGAGGAAACCCTAAAATTCCTCTTCTCCTTCTGCTCTCGATTCGATTCGATCTCGTCGCCACGCCCCCGCCCCCGCCCCCGCCCCGCCCCGCAAGCCGCCGATCTGTTGCGCCTCGTCAAGACCCCCCAGCCCAAGATCTGATTCGTTTCGATTCCGAGCTGAGCAGCAGCAGGAGCAGGAGGAGGAGGAGGAGCTCATCGATTTGGTGGTTGCTGATGGGCGGCGCATCCATGTTGGATGAGGAAGCGCACTGCATCTGATCGCATTCGGGTCCCCTCCAGCAACCCCGCGCCATCGCCGTCGCCGCCGCCGCCGCCGCCGCCGCCGGAGGAACCTGCCGTGCCCATGCCGCATGTTGGGGCCCGCCGCTCCACGCGCGTCTTCGTGCCCAAGACGCCCAGGCCGCCTCAGCCTTCTGATCCTGCCAGGGTCCTCCGCTCCGGCAAGCGCCTCGCCTTCTCCGAATCCCCCGCCGACGCCCACTGGTTCCAGTGCAAGCCCAACAACTGCTTCCACGTCCATGACCACCAACGCCAACTTCACGACGACCCCAAGCCACCGCCGCCGCCTCTGCCGCGCACAAGGTCCTTCGGGATCGTCTACAGCAGGAAGCGCCGCCGCCGCCTCCCCGAACCCAAGGAGGACACCAGGTTTGCCATTGTCTTCACTAGGAAGAGACCCAAGGTCGCCCCTTTTCAGCACCACGCCCCGAACGACCTTGCCACCATCCCATGCTCCTCTTCCAGGGAGTTTGCCTCCAGGACTGGCTTCTTTGATTCCCATTTCTTGACCCTGGTGGATTGTATTCCCACTAATAAAGCTGACGCTGCCATGCTTATTGTCCTTGTGGATTCATCTTGCTCTGGGAGCTCTCAGCACTTCTTGCGCCTCCTCCTCTCTGTGCTGCGCTGGATGCGTAGCTGCCGACGGGGCAAGGTCCGAAACCTTGCCTCCTTTCTCTCGTCCGATGCTGTCGCCACTGCGCTTGCATTGCGGGGATTGCATTTTGTCCAGCTTCAATGCCGGAGAGACTGTGCATTGTCACAGAGGGCTTTGGTGCAATGTGGCTGGTGTGAGCTTCGTGGTGCCAAGGATTCTGAACCATTGTTGTCTGTCAATTTCTTGGCAGTCCCTTCTTACTTCCAGATTTTGCACTTGTTAATAGCACTCGAGTCAATGTATCTTCCAGCTGTGATTCGTACGAGAATGCATTTGGTTGGTGGAGCTGAAGAAATTTATCCTCGCACCCTATTGGAGGAGGATTCTGAATCTCTGAGCACTGGGGATACTGATCCTGCTGTTGACCTGTGTAGCAACAAACTTTGCAGTGTGGCTCAAGATTATGTGCCCCTTGAAGAGATTGCAGGAGTGGTGGTCCATGGTCTGAGGCTAAAGAAGCATCAAAGGAAGAGAAGCTCTATGCGGCATCCCCTCAGTCGACAGCGTCTTGCTGCAAGATTTCCCGACAAGGTAGTTGCAACAAACCAGACCGATGTGGCTAGACAGACAGAAGCGGATGCGCCACCCTCAGTTAGTCCGGAGCTTCCACTGGAGCCTGTCAAACCTAAAGCAGCACTGGAAATCTCTCTTGATTTGCTTGAAAACATGGATGACAGTGATGTTTCAACTCCTATAGGATCAAATGGGAAGCAAAAGAGGTCTTCTTTGAAAAGTCCCATTGAGCGCATGAATGAAAGGTTGGCTTTGGCTGAGGTTAGACAGAATATAGATTCTGTTCACTGCAGAGCAAACCTTTTAATTATTCAACCTGATAGGTGCTGGAGGGAAGAAGGCGCTGAAGTTATGCTGGAACCATCGGAATCAAATGAGTGGTGTATAGCTGTGAAGATACATGGTGTCAATAGAATATCTCTGAAGCCTTCGGAGCAGAGGTTTTATGTTGTTAACCGGTTCACCCATGCCTATATTTTGGCAGTTGATGATGGATTGAAGATTGAGTTCTCTGATAAATGGGACTGGCTTTTGTTTAAGGAGTTGCAAATTGAGGGTCGGGAGCGCAATTCCCAGGGAAAGATGATACCAATTCCTGGTGTAAATGAGGTTTCTGATGACATGGGAGTGATTGGAACATATCCTTTTTCACGCCCTGTGCCAGACTATATCAGAATGGCGGATGATGAGGTTGGGCGAGCTCTCTCAAGGGACTCTGTATATGATCTGGATTCTGAGGATGAACAGTGGCTCACCCAGTTGAATCATTCAGATTCTGACAGAAAAAGCGCACATCTTAATCATATTTCTTATGAAGATTTTGAAAAGATGATTACCACGTTTGAAAAGGATGCTTTCAACAACCCTGAAGGAACTAGTGATTTGGATCAGATTCTTTCCAGATACCCTACTTTGGAAAAGGACCATAATGTCCTTGCTGTGCATGAATATTGGATAAACAAGAGATATAAGAAAGGTGTACCACTGCTAAGGATATTGCAGGGTGCAACACTAAGACGAGGACAACTGTCACAAAGATCTATTAAGAAAAAAAGATCTTTCAAGAGACA AAGAAGCCAAGCTGGCCGTGGAAAGCCTGACATATGCTTGCAAGATGCTAATGGTGCTGAAGAGGAGGCTTTGCGGAGAGTTGTGGAAGCCGAACGTGCTGCAACACAGGCAGGAGAAACAGCTGTTCGTCTGCGCAGTAGAGCTCAGCGTCTCATGGCAAAGGCTGAGCTGGTGGCATACAAATCTATTATGGCCCTCAGGATTGCTGAGGCTGCTAGGATATCTGACTCGTCACGGGATCTTGTTTTGACGACCCTCGACTAGTGAAGAATGTGAGTGAGATGTTCATTGATTTGTGTGAAGAGCATAGTAGCCAATAGTTTGTTTTCCTCTTTTTTGCCGCATCATTTCAATGCTACGTGGTATTTGGCTTTCGGGTAAGCTGTGGGCTGTGGGTCTCTTTTTTCCTCCCCACCTGTTTTAACTTTGTGAAGCCAATCTTTGTAGCGGATGCTTGAACTCAACTGTAATCTCTTGTGTACATGATAGTGGTTAGTTA ] [+] EMBL CB665446 [ AAAATTCCTCTTCTCCTTCTGCTCTCGATTCGATTCGATCTCGTCGCCACGCCCCCGCCCCCGCCCCCGCCCCGCCCCGCAAGCCGCCGATCTGTTGCGCCTCGTCAAGACCCCCCAGCCCAAGATCTGATTCGTTTCGATTCCGAGCTGAGCAGCAGCAGGAGCAGGAGGAGGAGGAGGAGCTCATCGATTTGGTGGTTGCTGATGGGCGGCGCATCCATGTTGGATGAGGAAGCGCACTGCATCTGATCGCATTCGGGTCCCCTCCAGCAACCCCGCGCCATCGCCGTCGCCGCCGCCGCCGCCGCCGCCGCCGGAGGAACCTGCCGTGCCCATGCCGCATGTTGGGGCCCGCCGCTCCACGCGCGTCTTCGTGCCCAAGACGCCCAGGCCGCCTCAGCCTTCTGATCCTGCCAGGGTCCTCCGCTCCGGCAAGCGCCTCGCCTTCTCCGAATCCCCCGCCGACGCCCACTGGTTCCAGTGCAAGCCCAACAACTGCTTCCACGTCCATGACCACCAACGCCAACTTCACGACGACCCCAAGCCACCGCCGCCGCCTCTGCCGCGCACAAGGTCCTTCGGGATCGTCTACAGCAGGAAGCGCCGCCGCCGCCTCCCCGAACCCAAGGAGGACACCAGGTTTGCCATTGTCTTCACTAGGAAGAGACCCAAGGTCGCCCCTTTTCAGCACCACGCCCCGAACGACCTTGCCACCATCCCATGCTCCTCTTCCAGGGAGTNTGCCTCCAGGACTGGCTTCTGTGATTCCCATTTCTTGACCCTGGTGGATTG ] [+] EMBL CB658850 [ GAAGCGCCGCCGCCGCCTCCCCGAACCCAAGGAGGACACCAGGTTTGCCATTGTCTTCACTAGGAAGAGACCCAAGGTCGCCCCTTTTCAGCACCACGCCCCGAACGACCTTGCCACCATCCCATGCTCCTCTTCCAGGGAGTTTGCCTCCAGGACTGGCTTCTTTGATTCCCATTTCTTGACCCTGGTGGATTGTATTCCCACTAATAAAGCTGACGCTGCCATGCTTATTGTCCTTGTGGATTCATCTTGCTCTGGGAGCTCTCAGCACTTCTTGCGCCTCCTCCTCTCTGTGCTGCGCTGGATGCGTAGCTGCCGACGGGGCAAGGTCCGAAACCTTGCCTCCTTTCTCTCGTCCGATGCTGTCGCCACTGCGCTTGCATTGCGGGGATTGCATTTTGTCCAGCTTCAATGCCGGAGAGACTGTGCATTGTCACAGAGGGCTTTGGTGCAATGTGGCTGGTGTGAGCTTCGTGGTGCCAAGGATTCTGAACCATTGTTGTCTGTCAATTTCTTGGCAGTCCCTTCTTACTTCCAGATTTTGCACTTGTTAATAGCACTCGAGTCAATGTATCTTCCAGCTGTGATTCGTACGAGAATGCATTTGGTTGGTGGAGCTGAAGAAATTTATCCTCGCACCCTATTGGAGGAGGATTCTGAATCTCTGAGCACTGGGGATACTGATCCTGCTGTTGACCTGTGTAGCAACAAACTTTGCAGTGTGGCTCAAGATTATGTGCCCCTTGAAGAGATTGCAGGAGTGGTGG ] [-] EMBL CB658851 [ GTGGCTCACCCAGTTGAATCATTCAGATTCTGACAGAAAAAGCGCACATCTTAATCATATTTCTTATGAAGATTTTGAAAAGATGATTACCACGTTTGAAAAGGATGCTTTCAACAACCCTGAAGGAACTAGTGATTTGGATCAGATTCTTTCCAGATACCCTACTTTGGAAAAGGACCATAATGTCCTTGCTGTGCATGAATATTGGATAAACAAGAGATATAAGAAAGGTGTACCACTGCTAAGGATATTGCAGGGTGCAACACTAAGACGAGGACAACTGTCACAAAGATCTATTAAGAAAAAAAGATCTTTCAAGAGACA AAGAAGCCAAGCTGGCCGTGGAAAGCCTGACATATGCTTGCAAGATGCTAATGGTGCTGAAGAGGAGGCTTTGCGGAGAGTTGTGGAAGCCGAACGTGCTGCAACACAGGCAGGAGAAACAGCTGTTCGTCTGCGCAGTAGAGCTCAGCGTCTCATGGCAAAGGCTGAGCTGGTGGCATACAAATCTATTATGGCCCTCAGGATTGCTGAGGCTGCTAGGATATCTGACTCGTCACGGGATCTTGTTTTGACGACCCTCGACTAGTGAAGAATGTGAGTGAGATGTTCATTGATTTGTGTGAAGAGCATAGTAGCCAATAGTTTGTTTTCCTCTTTTTTGCCGCATCATTTCAATGCTACGTGGTATTTGGCTTTCGGGTAAGCTGTGGGCTGTGGGTCTCTTTTTTCCTCCCCACCTGTTTTAACTTTGTGAAGCCAATCTTTGTAGCGGATGCTTGAACTCAACTGTAATATGTTGTGTACATGATAGTGGTTAGTTAGA TTGTG ] [-] EMBL CB665447 [ TTCAGATTCTGACAGAAAAAGCGCACATCTTAATCATATTTCTTATGAAGATTTTGAAAAGATGATTACCACGTTTGAAAAGGATGCTTTCAACAACCCTGAAGGAACTAGTGATTTGGATCAGATTCTTTCCAGATACCCTACTTTGGAAAAGGACCATAATGTCCTTGCTGTGCATGAATATTGGATAAACAAGAGATATAAGAAAGGTGTACCACTGCTAAGGATATTGCAGGGTGCAACACTAAGACGAGGACAACTGTCACAAAGATCTATTAAGAAAAAAAGATCTTTCAAGAGACA AAGAAGCCAAGCTGGCCGTGGAAAGCCTGACATATGCTTGCAAGATGCTAATGGTGCTGAAGAGGAGGCTTTGCGGAGAGTTGTGGAAGCCGAACGTGCTGCAACACAGGCAGGAGAAACAGCTGTTCGTCTGCGCAGTAGAGCTCAGCGTCTCATGGCAAAGGCTGAGCTGGTGGCATACAAATCTATTATGGCCCTCAGGATTGCTGAGGCTGCTAGGATATCTGACTCGTCACGGGATCTTGTTTTGACGACCCTCGACTAGTGAAGAATGTGAGTGAGATGTTCATTGATTTGTGTGAAGAGCATAGTAGCCAATAGTTTGTTTTCCTCTTTTTTGCCGCATCATTTCAATGCTACGTGGTATTTGGCTTTCGGGTAAGCTGTGGGCTGTGGGTCTCGGGTTTCCTCCCCACCTGTTTTAACTTTGTGAAGCCAATCTTTGTAGCGGATGCTTGAACTCAACTGTAATTACGGGTGTACATGATAGTGGTTAG ] [+] EMBL BQ906422 [ TCAAGAGACACAAGAAGCCAAGCTGCCCGTGGAAAGCCTGACATATGCTTGCAAGATGCTAATGGTGCTGAAGAGGAGGCTTTGCGGAGAGTTGTGGAAGCCGAACGTGCTGCAACACAGGCAGGAGAAACAGCTGTTCGTCTGCGCAGTAGAGCTCAGCGTCTCATGGCAAAGGCTGAGCTGGTGGCATACAAATCTGTTATGGCCCTCAGGATTGCTGAGGCTGCTAGGATATCTGACTCGTCACGGGATCTTGTTTTGACGACCCTCGACTAGTGAAGAATGTGAGTGAGATGTTCATTGATTTGTGTGAAGAGCATAGTAGCCAATAGTTTGTTTTCCTCTTTTTTGCCGCATCATTTCAATGCTACGTGGTATTTGGCTTTCGGGTAAGCTGTGGGCTGTGGGTCTCTTTTTTCCTCCCCACCTGTTTTAACTTTGTGAAGCCAATCTTTGTAGCGGATGCTTGAACTCAACTGTAATCTCTTGTGTACATGATAGTGGTTAGTTAGACTTGT GTGTATCTTTTCTGTAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||