These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9065#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3383 fasta sequence [ATCATTCTTTAGCTCCTATGCCACAGATCAATTATCAGGTACCTTTTCCAGTTTCCTGCTGGGTTCCCTACTTTTCATCAAGTGCACATCTATGTTGGGAATCCAATCTTTGATGTGCTATATTAGTATATGGTGTGGATCCTGTTCTTATGATGTCACCGTCACATAATTACATGCTTACTTGCAGAGGTAAATACATGATTAATCAGAAAAATATCAGAAGTTTTTCTTTGGGAGTGCTAGGAGTTTGGTTCATTTGATCATAAATTTTCTTAGCTTGTTTCATCTTTCATATTATTTTTCTCAATGCACCACATATCATGACAGGCTGATATTGTTAGTCAACGTGATCAGGAAATCCAATACCCTTGGCTGGTAAGTTTGAGTTATAAATATTCAAATAAATATTTGAGTCCTTTTGTTTTCAAGTACCAAATCCATAGAATAGATTATTGCCAAGAGAGCACCCTGGTACTTGACTGTAGAGATTTGTATCCCATGTAATACAAGAATCTTGGCCACTTGCATGGTGGGGGTTCTTCCCCATCGTCCACACCTTAGGATGTTGACGATTTGAATTATCACGTGGGAGATTCGCATATGTGCAGGTGACTTTTGTTTTTGCTGATGCGACTGATGTAAAGGAGCCAGTAAGTATTTTGTAATCCACACTTTCAGGCATAACCTATTTCTAAACTCTCATCATCATAACTGGATGACCTGTTCCTCTCTCTTATTAAAAACTTGCAGTTTGTGGCCTAGTCAACTATTTGATGTTGGCCAAAATGTAGACGTGGCAGGACTTTCATTTTAATTGGAAGTCCTGAGGACTAAGATGAAAGAACAAAAATCTGAAGTAAATGCTAAGAATTTACAATGTTAAAAAAAAAACTGAACTACCAAATCGCATTTTGGCAGGAACAAACCATTTAGAAATGTTCAGCGAATTCATTTTGTATAGCTTTTGAAGTTCTCTTGAACAATTAGTCCTTTGAGAAAAGAAAGTTATGGAATGATGCCATTGGAATGTTCACCAAGAAAGAGAAATAAAACATGATTTTCTACATGGAATGGACCATTGTTATAATAAGTGGTAATTTCACCATCCTACAGGGTTACCAGAAAAGAAATTCCTTAGACTGTTTGGATCATGCTTGGATCAGATCTGTCATTTTCTTTTTATAGAAAATCTGGAGGTTCATAGTACCCTGAACTATCTACCAATCACTGTGCTACGGAAATCAAACATGTAAGTATGTATCCTCTCGCATAACATGCAGTTATCCCATGAATCTAGTTATGGCACTTCATTGTACACTAGATCCTATTTACATATTTTTTACTAGAATAAACCTATATTGCTCCCACCAGCAAGGTTAGTGACATTTTGGGATGACTGCAATTACATTGAAAAAAAAGGTTTATGTAAGTTTTTCTTGAAAAATGTGTTCATGATATATTTATATTCCGTAAACATGTTACAGTAGAAATTAATGGCCAAACCCAAACTTACATGTCAATTTCCAAAATGTCAATTATCTGTGACTGGACATCAAAGTGACTTAATGTTTGAATGAAATAGCTATTTTCAATATAGTTTCTGTCTATGAACATTTTGACTGAATATCTCCAGTATGTCGTCATTATGCGCAAAGGGGTTGAATTCTAGGTGTTGATATGGATTGTTTTTATCTGTTTTGTTTGACTACATATCACAGTTGAATAATATATCTGGTTTGCATGTCATTCTTTTCTAGCACCATGACAGATTAGTTTAGTTGAAATATGAAGGGGTAGATAAGTACTTCTATCCTTTCTGGCGCAATAAAAGCTTATTTTCCTCAATTAGAGGAAGTCCAAATAGGCATATATTTAATGTGTGTCCGTTCCTACTCATTTTATTGGCATTTCCTTTAAATAGGTTCAGTGAAGCTGCAGAGTGAAGGTTATAGTGAAGACTGGCCTGCTATATGTGCATTGCACAAGACAATCTGCAGTCTTTTTGTCCTCTTGATTTGAATATAAAGGTTCTAATTCTACTAAAAATGAATATAATACAAGCATTCAATAAACTGTTTAGGACTTGCACATGTCTCATCATTTAGATTGTGATAAAATAAAAAAAAATATTTGAACATTTCTGTTTGAGAGGGGAGGATGTTAATACAAATTTCTAGTCTTCTGTTTTTACCTGGAAGGCTTCATAGCCACAGCTTCTATTCCAAAAACTATTTGCTTGTCGTAATCACTGAATTGATACACATTTCATGGTTTCTACAGCCATTCAGTTGACTTGAATCAGTACCAGAAATCACCTTTACTTGAAACATTCTACAAGTTGTTAGTGCCAATACCTTCACATAGTGATAACATATTACCTAGCATATGTTAACCATCAAATGCACCCTTAACACATTGTCCCAAACAGGGATCAAAGGATAAATGATCTCTCTAAATAGTTCTTTTTTTCTTCATATGTGTGTTAGGGTTG-GGGTGTGGCAGAGGGGGTATTA-GAAGGCCAAACCTCTGTGGTACACGTCTATAGATTCCAAATAAATGATACAGTACCTCTTTGGTACTCCCATCAACATGGTTCACACCACACCACTACACCAGTGACACCACCACCACCATTACAGGGTATTTTTCTTGGCCCCTCTGTATAAATAGCAGCACCATGTTCACTCTTTGTTCCATTGAAATACAAGCAACCATAAACAGTAGCCATTTCTAGGACCTTGGCCTTTCTTGAAGGAGGATGAGTTCATCCTGGACAACAAAGCAGAATAAGGTGTTTGAGAGGGCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTTGGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTGGATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAGGAGGTACCACAACTTTCAGTGAATGTGACATTGACATCTCGAAAGCCGAAAGCAGCCTGAGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTTCGTTTATGTTTTCTATTATGCGCGTGTGTGAATCAGAACTGGCCCTAATAGACCAGTAGTTAGTAACTTAGTTTCAATTGAGCTATGACTGGTTTGCTGAATTATACTGTTGTATTCCATCTGACGATGCTGTATATGTAATATCTGATGGAAAGTTTATAATCTTCTCAGAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGTAGCGTATCGTTGAC] [+] EMBL AK121386 [ATCATTCTTTAGCTCCTATGCCACAGATCAATTATCAGGTACCTTTTCCAGTTTCCTGCTGGGTTCCCTACTTTTCATCAAGTGCACATCTATGTTGGGAATCCAATCTTTGATGTGCTATATTAGTATATGGTGTGGATCCTGTTCTTATGATGTCACCGTCACATAATTACATGCTTACTTGCAGAGGTAAATACATGATTAATCAGAAAAATATCAGAAGTTTTTCTTTGGGAGTGCTAGGAGTTTGGTTCATTTGATCATAAATTTTCTTAGCTTGTTTCATCTTTCATATTATTTTTCTCAATGCACCACATATCATGACAGGCTGATATTGTTAGTCAACGTGATCAGGAAATCCAATACCCTTGGCTGGTAAGTTTGAGTTATAAATATTCAAATAAATATTTGAGTCCTTTTGTTTTCAAGTACCAAATCCATAGAATAGATTATTGCCAAGAGAGCACCCTGGTACTTGACTGTAGAGATTTGTATCCCATGTAATACAAGAATCTTGGCCACTTGCATGGTGGGGGTTCTTCCCCATCGTCCACACCTTAGGATGTTGACGATTTGAATTATCACGTGGGAGATTCGCATATGTGCAGGTGACTTTTGTTTTTGCTGATGCGACTGATGTAAAGGAGCCAGTAAGTATTTTGTAATCCACACTTTCAGGCATAACCTATTTCTAAACTCTCATCATCATAACTGGATGACCTGTTCCTCTCTCTTATTAAAAACTTGCAGTTTGTGGCCTAGTCAACTATTTGATGTTGGCCAAAATGTAGACGTGGCAGGACTTTCATTTTAATTGGAAGTCCTGAGGACTAAGATGAAAGAACAAAAATCTGAAGTAAATGCTAAGAATTTACAATGTTAAAAAAAAAACTGAACTACCAAATCGCATTTTGGCAGGAACAAACCATTTAGAAATGTTCAGCGAATTCATTTTGTATAGCTTTTGAAGTTCTCTTGAACAATTAGTCCTTTGAGAAAAGAAAGTTATGGAATGATGCCATTGGAATGTTCACCAAGAAAGAGAAATAAAACATGATTTTCTACATGGAATGGACCATTGTTATAATAAGTGGTAATTTCACCATCCTACAGGGTTACCAGAAAAGAAATTCCTTAGACTGTTTGGATCATGCTTGGATCAGATCTGTCATTTTCTTTTTATAGAAAATCTGGAGGTTCATAGTACCCTGAACTATCTACCAATCACTGTGCTACGGAAATCAAACATGTAAGTATGTATCCTCTCGCATAACATGCAGTTATCCCATGAATCTAGTTATGGCACTTCATTGTACACTAGATCCTATTTACATATTTTTTACTAGAATAAACCTATATTGCTCCCACCAGCAAGGTTAGTGACATTTTGGGATGACTGCAATTACATTGAAAAAAAAGGTTTATGTAAGTTTTTCTTGAAAAATGTGTTCATGATATATTTATATTCCGTAAACATGTTACAGTAGAAATTAATGGCCAAACCCAAACTTACATGTCAATTTCCAAAATGTCAATTATCTGTGACTGGACATCAAAGTGACTTAATGTTTGAATGAAATAGCTATTTTCAATATAGTTTCTGTCTATGAACATTTTGACTGAATATCTCCAGTATGTCGTCATTATGCGCAAAGGGGTTGAATTCTAGGTGTTGATATGGATTGTTTTTATCTGTTTTGTTTGACTACATATCACAGTTGAATAATATATCTGGTTTGCATGTCATTCTTTTCTAGCACCATGACAGATTAGTTTAGTTGAAATATGAAGGGGTAGATAAGTACTTCTATCCTTTCTGGCGCAATAAAAGCTTATTTTCCTCAATTAGAGGAAGTCCAAATAGGCATATATTTAATGTGTGTCCGTTCCTACTCATTTTATTGGCATTTCCTTTAAATAGGTTCAGTGAAGCTGCAGAGTGAAGGTTATAGTGAAGACTGGCCTGCTATATGTGCATTGCACAAGACAATCTGCAGTCTTTTTGTCCTCTTGATTTGAATATAAAGGTTCTAATTCTACTAAAAATGAATATAATACAAGCATTCAATAAACTGTTTAGGACTTGCACATGTCTCATCATTTAGATTGTGATAAAATAAAAAAAAATATTTGAACATTTCTGTTTGAGAGGGGAGGATGTTAATACAAATTTCTAGTCTTCTGTTTTTACCTGGAAGGCTTCATAGCCACAGCTTCTATTCCAAAAACTATTTGCTTGTCGTAATCACTGAATTGATACACATTTCATGGTTTCTACAGCCATTCAGTTGACTTGAATCAGTACCAGAAATCACCTTTACTTGAAACATTCTACAAGTTGTTAGTGCCAATACCTTCACATAGTGATAACATATTACCTAGCATATGTTAACCATCAAATGCACCCTTAACACATTGTCCCAAACAGGGATCAAAGGATAAATGATCTCTCTAAATAGTTCTTTTTTTCTTCATATGTGTGTTAGGGTTG GGGTGTGGCAGAGGGGGTATTA GAAGGCCAAACCTCTGTGGTACACGTCTATAGATTCCAAATAAATGATACAGTACCTCTTTGGTACTCCCATCAACATGGTTCACACCACACCACTACACCAGTGACACCACCACCACCATTACAGGGTATTTTTCTTGGCCCCTCTGTATAAATAGCAGCACCATGTTCACTCTTTGTTCCATTGAAATACAAGCAACCATAAACAGTAGCCATTTCTAGGACCTTGGCCTTTCTTGAAGGAGGATGAGTTCATCCTGGACAACAAAGCAGAATAAGGTGTTTGAGAGGGCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTTGGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTGGATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAGGAGGTACCACAACTTTCAGTGAATGTGACATTGACATCTCGAAAGCCGAAAGCAGCCTGAGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTTCGTTTATGTTTTCTATTATGCGCGTGTGTGAATCAGAACTGGCCCTAATAGACCAGTAGTTAGTAACTTAGTTTCAATTGAGCTATGACTGGTTTGCTGAATTATACTGTTGTATTCCATCTGACGATGCTGTATATGTAATATCTGATGGAAAGTTTATA ] [+] EMBL CF331250 [ GCTTCTATTCC AAAACTATTTGCTTGTCGTAATCACTGAATTGATACACATTTCATGGTTTCTACAGCCATTCAGTTGACTTGAATCAGTACCAGAAATCACCTTTACTTGAAACATTCTACAAGTTGTTAGTGCCAATACCTTCACATAGTGATAACATATTACCTAGCATATGTTAACCATCAAATGCACCCTTAACACTTTGTCCCAAACAGGGATCAAAGGATAAATGATCTCTCTAAATATTTCTTTTTTTCTTCATATGTGTG TAGGGTTGNGGGTGTGGCANAGGGGGTATTANNAAGGCCAAACCTCTGTGGTACACGTCTATAGATTCCAAATAAATGATACAGTACCTCTTTGGTACTCCCATCAACATGGTTCACACCACACCACTACACCAGTGACACCACCACCACCATTACAGGGTATTTTTCTTGGCCCCTCTGTATAAATAGCAGCACCATGTTCACTCTTTGTTCCATTGAAATACAAGCAAC ] [-] EMBL CF331251 [ GAGTTCATCCTGGACAACAAAGCAGAATAAGGTGTTTGAGAGGGCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTTGGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTGGATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAGGAGGTACCACAACTTTCAGTGAATGTGACATTGACATCTCGAAAGCCGAAAGCAGCCTGAGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTTCGTTTATGTTTTCTATTATGCGCGTGTGTGAATCAGAACTGGCCCTAATAGACCAGTAGTTAGTAACTTAGTTTCAATTGAGCTATGACTGGTTTGCTGAATTGTACTGTTGTATTCCATCTGACGATGCTGTATATGTAATATCTGATGGAAAGTTTATAATCTTCTCAGAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGTAGCGTATCGTTGAC] consensusID : consensus_9065#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 839 fasta sequence [TTAGAAGGCCAAACCTCTGTGGTACACGTCTATAGATCCCAAATAAATGATACAGTACCTCTTTGGTACTCCCATCAACATGGTTCACACCACACCACTACACCAGTGACACCACCACCACCATTACAGGGTATTTTTCTTGGCCCCTCTGTATAAATAGCAGCACCATGTTCACTCTTTGTTCCATTGAAATACAAGCAACCATAAACAGTAGCCATTTCTAGGACCTTGGCCTTTCTTGAAGGAGGATGAGTTCATCCTGGACAACAAAGCAGAATAAGGTGTTTGAGAGGGCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTTGGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTGGATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAGGAGGTACCACAACTTTCAGTGAATGTGACATTGACATCTCGAAAGCCGAAAGCAG-CCTGAGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTTCGTTTATGCTTTCTATTATGCGCGTGTGTGAATCAGAACTGGCCCTAATAGACCAGTAGTTAGTAACTTAGTTTCAATTGAGCTATGACTGGTTTGCTGAATTATACTGTTGTATTCCATCTGACGATGCTGTATATGTAATATCTGATGGAAAGTTTATAATCTTCTCTGAGATCTAAAGTTCACAT] [-] EMBL CB618149 [TTAGAAGGCCAAACCTCTGTGGTACACGTCTATAGATCCCAAATAAATGATACAGTACCTCTTTGGTACTCCCATCAACATGGTTCACACCACACCACTACACCAGTGACACCACCACCACCATTACAGGGTATTTTTCTTGGCCCCTCTGTATAAATAGCAGCACCATGTTCACTCTTTGTTCCATTGAAATACAAGCAACCATAAACAGTAGCCATTTCTAGGACCTTGGCCTTTCTTGAAGGAGGATGAGTTCATCCTGGACAACAAAGCAGAATAAGGTGTTTGAGAGGGCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTTGGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTGGATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAGGAGGTACCACAACTTTCAGTGAATGTGACATTGACATCTCGAAAGCCGAAAGCAG CCTGAGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTTCGTTTATGCTTTCTATTATGCGCGTGTGTGAATCAGAACTGGCCCTAATAGACCAGTAGTTAGTAACTTAGTTTCAATTGAGCTATGACTGGTTTGCTGAATTATACTGTTGTATTCCATCTGACGATGCTGTATATGTAATATCTGATGGAAAGTTTATAATCTTCTCTGAGATCTAAAGTTCACAT] [+] EMBL CB096278 [ CATAAACAGTAGCCATTTCTAGGACCTTGGCCTTTCTTGAAGGAGGATGAGTTCATCCTGGACAACAAAGCAGAATAAGGTGTTTGAGAGGGCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTTGGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTGGATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGAAGGAGGTACCACAACTTTCAGTGAATGTGACGTTGACATCTCGAAAGCCGAAAGCAGCCCTGAGTTCCAGCAGGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTTCGTTTATGCTTTCTATTATGCGCGTGTGTGAATCAGAACTGGCCCTAATAGACCAGTAGTTAGTAACTTAGTTTCAATTGAGCTATGACTGGTTTGCTGAATTATACTGTTGTATTCCGTCTGACGATGCTGTATATGTAATATCTGATGGAAAGGTTATAATCTT ] consensusID : consensus_9065#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 822 fasta sequence [TACTTCGTCGCCTCCTCCTCTCACAGTGGCTTTATCGCATCTTATGATTCTTATCCAGGCAATCAGGCATCATTCTTTAGCTCCTATGCCACAGATCAATTATCAGGTACCTTTTCCAGTTTCCTGCTGGGTTCCCTACTTTTCATCAAGTGCACATCTATGTTGGGAATCCAATCTTTGATGTGCTATATTAGTATATGGTGTGGATCCTGTTCTTATGATGTCACCGTCACATAATTACATGCTTACTTGCAGAGGTAAATACATGATTAATCAGAAAAATATCAGAAGTTTTTCTTTGGGAGTGCTAGGAGTTTGGTTCATTTGATCATAAATTTTCTTAGCTTGTTTCATCTTTCATATTATTTTTCTCAATGCACCACATATCATGACAGGCTGATATTGTTAGTCAACGTGATCAGGAAATCCAATACCCTTGGCTGGTAAGTTTGAGTTATAAATATTCAAATAAATATTTGAGTCCTTTTGTTTTCAAGTACCAAATCCGTAGAATAGATTATTGCCAAGAGAGCACCCTGGTACTTGACTGTAGAGATTTGTATCCCATGTAATACAAGAATCTTGGCCACTTGCATGGTGGGGGTTCTTCCCCATCGTCCACACCTTAGGATGTTGACGATTTGAATTATCACGTGGGAGATTCGCATATGTGCAGGTGACTTTTGTTTTTGCTGATGCGACTGATGTAAAGGAGCCAGGTTACCAGAAAAGAAATTCCTTAGACTGTTTGGATCATGCTTGGATCAGATCTGTCATTTTCTTTTTATAGAAAATCTGGAGGTTCATAGTACCCTGAACTAT] [+] EMBL CB618148 [TACTTCGTCGCCTCCTCCTCTCACAGTGGCTTTATCGCATCTTATGATTCTTATCCAGGCAATCAGGCATCATTCTTTAGCTCCTATGCCACAGATCAATTATCAGGTACCTTTTCCAGTTTCCTGCTGGGTTCCCTACTTTTCATCAAGTGCACATCTATGTTGGGAATCCAATCTTTGATGTGCTATATTAGTATATGGTGTGGATCCTGTTCTTATGATGTCACCGTCACATAATTACATGCTTACTTGCAGAGGTAAATACATGATTAATCAGAAAAATATCAGAAGTTTTTCTTTGGGAGTGCTAGGAGTTTGGTTCATTTGATCATAAATTTTCTTAGCTTGTTTCATCTTTCATATTATTTTTCTCAATGCACCACATATCATGACAGGCTGATATTGTTAGTCAACGTGATCAGGAAATCCAATACCCTTGGCTGGTAAGTTTGAGTTATAAATATTCAAATAAATATTTGAGTCCTTTTGTTTTCAAGTACCAAATCCGTAGAATAGATTATTGCCAAGAGAGCACCCTGGTACTTGACTGTAGAGATTTGTATCCCATGTAATACAAGAATCTTGGCCACTTGCATGGTGGGGGTTCTTCCCCATCGTCCACACCTTAGGATGTTGACGATTTGAATTATCACGTGGGAGATTCGCATATGTGCAGGTGACTTTTGTTTTTGCTGATGCGACTGATGTAAAGGAGCCAGGTTACCAGAAAAGAAATTCCTTAGACTGTTTGGATCATGCTTGGATCAGATCTGTCATTTTCTTTTTATAGAAAATCTGGAGGTTCATAGTACCCTGAACTAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9065#0 ATCATTCTTTAGCTCCTATGCCACAGATCAATTATCAGGTACCTTTTCCAGTTTCCTGCT 60 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 GGGTTCCCTACTTTTCATCAAGTGCACATCTATGTTGGGAATCCAATCTTTGATGTGCTA 120 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TATTAGTATATGGTGTGGATCCTGTTCTTATGATGTCACCGTCACATAATTACATGCTTA 180 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 CTTGCAGAGGTAAATACATGATTAATCAGAAAAATATCAGAAGTTTTTCTTTGGGAGTGC 240 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TAGGAGTTTGGTTCATTTGATCATAAATTTTCTTAGCTTGTTTCATCTTTCATATTATTT 300 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TTCTCAATGCACCACATATCATGACAGGCTGATATTGTTAGTCAACGTGATCAGGAAATC 360 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 CAATACCCTTGGCTGGTAAGTTTGAGTTATAAATATTCAAATAAATATTTGAGTCCTTTT 420 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 GTTTTCAAGTACCAAATCCATAGAATAGATTATTGCCAAGAGAGCACCCTGGTACTTGAC 480 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TGTAGAGATTTGTATCCCATGTAATACAAGAATCTTGGCCACTTGCATGGTGGGGGTTCT 540 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TCCCCATCGTCCACACCTTAGGATGTTGACGATTTGAATTATCACGTGGGAGATTCGCAT 600 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 ATGTGCAGGTGACTTTTGTTTTTGCTGATGCGACTGATGTAAAGGAGCCAGTAAGTATTT 660 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TGTAATCCACACTTTCAGGCATAACCTATTTCTAAACTCTCATCATCATAACTGGATGAC 720 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 CTGTTCCTCTCTCTTATTAAAAACTTGCAGTTTGTGGCCTAGTCAACTATTTGATGTTGG 780 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 CCAAAATGTAGACGTGGCAGGACTTTCATTTTAATTGGAAGTCCTGAGGACTAAGATGAA 840 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 AGAACAAAAATCTGAAGTAAATGCTAAGAATTTACAATGTTAAAAAAAAAACTGAACTAC 900 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 CAAATCGCATTTTGGCAGGAACAAACCATTTAGAAATGTTCAGCGAATTCATTTTGTATA 960 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 GCTTTTGAAGTTCTCTTGAACAATTAGTCCTTTGAGAAAAGAAAGTTATGGAATGATGCC 1020 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 ATTGGAATGTTCACCAAGAAAGAGAAATAAAACATGATTTTCTACATGGAATGGACCATT 1080 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 GTTATAATAAGTGGTAATTTCACCATCCTACAGGGTTACCAGAAAAGAAATTCCTTAGAC 1140 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TGTTTGGATCATGCTTGGATCAGATCTGTCATTTTCTTTTTATAGAAAATCTGGAGGTTC 1200 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 ATAGTACCCTGAACTATCTACCAATCACTGTGCTACGGAAATCAAACATGTAAGTATGTA 1260 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TCCTCTCGCATAACATGCAGTTATCCCATGAATCTAGTTATGGCACTTCATTGTACACTA 1320 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 GATCCTATTTACATATTTTTTACTAGAATAAACCTATATTGCTCCCACCAGCAAGGTTAG 1380 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TGACATTTTGGGATGACTGCAATTACATTGAAAAAAAAGGTTTATGTAAGTTTTTCTTGA 1440 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 AAAATGTGTTCATGATATATTTATATTCCGTAAACATGTTACAGTAGAAATTAATGGCCA 1500 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 AACCCAAACTTACATGTCAATTTCCAAAATGTCAATTATCTGTGACTGGACATCAAAGTG 1560 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 ACTTAATGTTTGAATGAAATAGCTATTTTCAATATAGTTTCTGTCTATGAACATTTTGAC 1620 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TGAATATCTCCAGTATGTCGTCATTATGCGCAAAGGGGTTGAATTCTAGGTGTTGATATG 1680 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 GATTGTTTTTATCTGTTTTGTTTGACTACATATCACAGTTGAATAATATATCTGGTTTGC 1740 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 ATGTCATTCTTTTCTAGCACCATGACAGATTAGTTTAGTTGAAATATGAAGGGGTAGATA 1800 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 AGTACTTCTATCCTTTCTGGCGCAATAAAAGCTTATTTTCCTCAATTAGAGGAAGTCCAA 1860 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 ATAGGCATATATTTAATGTGTGTCCGTTCCTACTCATTTTATTGGCATTTCCTTTAAATA 1920 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 GGTTCAGTGAAGCTGCAGAGTGAAGGTTATAGTGAAGACTGGCCTGCTATATGTGCATTG 1980 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 CACAAGACAATCTGCAGTCTTTTTGTCCTCTTGATTTGAATATAAAGGTTCTAATTCTAC 2040 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TAAAAATGAATATAATACAAGCATTCAATAAACTGTTTAGGACTTGCACATGTCTCATCA 2100 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TTTAGATTGTGATAAAATAAAAAAAAATATTTGAACATTTCTGTTTGAGAGGGGAGGATG 2160 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TTAATACAAATTTCTAGTCTTCTGTTTTTACCTGGAAGGCTTCATAGCCACAGCTTCTAT 2220 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TCCAAAAACTATTTGCTTGTCGTAATCACTGAATTGATACACATTTCATGGTTTCTACAG 2280 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 CCATTCAGTTGACTTGAATCAGTACCAGAAATCACCTTTACTTGAAACATTCTACAAGTT 2340 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 GTTAGTGCCAATACCTTCACATAGTGATAACATATTACCTAGCATATGTTAACCATCAAA 2400 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TGCACCCTTAACACATTGTCCCAAACAGGGATCAAAGGATAAATGATCTCTCTAAATAGT 2460 consensus_9065#1 ------------------------------------------------------------ consensus_9065#2 ------------------------------------------------------------ consensus_9065#0 TCTTTTTTTCTTCATATGTGTGTTAGGGTTGGGGTGTGGCAGAGGGGGTATTAGAAGGCC 2520 consensus_9065#1 --------------------------------------------------TTAGAAGGCC 10 consensus_9065#2 -----------------------------------------------TACTTCGTCGCCT 13 ** * * * consensus_9065#0 AAACCTCT----GTGGTA----CACGTCT-ATAGATTCCAAATAAATGATACAGTACCTC 2571 consensus_9065#1 AAACCTCT----GTGGTA----CACGTCT-ATAGATCCCAAATAAATGATACAGTACCTC 61 consensus_9065#2 CCTCCTCTCACAGTGGCTTTATCGCATCTTATGATTCTTATCCAGGCAATCAGGCATCAT 73 ***** **** * * *** ** * * * ** * * * consensus_9065#0 TTTGGTACTCCCATCAACATGGTTCA--CACCACACCACTACACCAGTGACACCACCACC 2629 consensus_9065#1 TTTGGTACTCCCATCAACATGGTTCA--CACCACACCACTACACCAGTGACACCACCACC 119 consensus_9065#2 TCTTTAGCTCCTAT-GCCACAGATCAATTATCAGGTACCTTTTCCAGTTTC-CTGCTGGG 131 * * **** ** ** * *** * ** ** ***** * * * consensus_9065#0 ACCATTACAGGGTATTTTTCTTG-GCCCCTCTGTATAAATAGCAGCACCATGTTCACTCT 2688 consensus_9065#1 ACCATTACAGGGTATTTTTCTTG-GCCCCTCTGTATAAATAGCAGCACCATGTTCACTCT 178 consensus_9065#2 TTCCCTAC----TTTTCATCAAGTGCACATCTATGTTGGGAATCCAATCTTTGATGTGCT 187 * *** * ** ** * ** * *** * * * * * * ** consensus_9065#0 TTGTTCCATTGAAATACAAGC---AACCATAAACAGTAGCCATTTCTAGGACCTTGGCCT 2745 consensus_9065#1 TTGTTCCATTGAAATACAAGC---AACCATAAACAGTAGCCATTTCTAGGACCTTGGCCT 235 consensus_9065#2 ATATTAGTATATGGTGTGGATCCTGTTCTTATGATGTCACCGTCAC-ATAATTACATGCT 246 * ** * * * ** ** ** * * * * ** consensus_9065#0 TTCTTGAAGGAGGATGAGTTCATCCTGGA-CAACAAAGCAGAATAAGGTGTT-TGAGAGG 2803 consensus_9065#1 TTCTTGAAGGAGGATGAGTTCATCCTGGA-CAACAAAGCAGAATAAGGTGTT-TGAGAGG 293 consensus_9065#2 TACTTGCAGAGG--TAAATACATGATTAATCAGAAAAATATCAGAAGTTTTTCTTTGGGA 304 * **** ** * * * * *** * * ** *** * * *** * ** * * * consensus_9065#0 GCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTT 2863 consensus_9065#1 GCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTT 353 consensus_9065#2 GTGCTAGGAGTTTGGTTCATTTGATCATAAATTTTCTTAGCTTGTTTCATCTTTCATATT 364 * *** * * * * ** * * * ** * * ** consensus_9065#0 GGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTG 2923 consensus_9065#1 GGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTG 413 consensus_9065#2 ATTTTTCTCAATGCACCACATATCATGACAGGCTGATATTGTTAGTCAA-CGTGATCAGG 423 * * ** ** ** *** * *** ** * * * * * consensus_9065#0 GATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGC 2983 consensus_9065#1 GATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGC 473 consensus_9065#2 AAATCCAATACCCTT------GGCTGGTAAGT-TTGAGTTATAAATATTCAAATAAATAT 476 * ** * * * *** *** * *** ** ** *** consensus_9065#0 AGCAGCAGCAGCAGCAGCA-GCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAG 3042 consensus_9065#1 AGCAGCAGCAGCAGCAGCA-GCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAG 532 consensus_9065#2 TTGAGTCCTTTTGTTTTCAAGTACCAAATCC----GTAGAATAGATTATTGCCAAGAGAG 532 ** ** * * *** ** * ** ** * *** *** consensus_9065#0 GAGGTACCACAACTTTCAGTGAATGT-GACATTGACATCTCGAAAGCCGAAAGCAGCCTG 3101 consensus_9065#1 GAGGTACCACAACTTTCAGTGAATGT-GACATTGACATCTCGAAAGCCGAAAGCAGCCTG 591 consensus_9065#2 ----CACCCTGGTACT---TGACTGTAGAGATTTGTATCCCATGTAATACAAGAATCTTG 585 *** * *** *** ** *** *** * *** * * ** consensus_9065#0 AGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTT 3161 consensus_9065#1 AGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTT 651 consensus_9065#2 GCCACTTGCATGGTGGGGGT-TCTTCCCCATCGTCCACACCT-TAGGATGTTGACGATTT 643 * *** * * * * * * **** * * * ** ** **** consensus_9065#0 CGTTTATGTTTTCTATTATGCGCGTGTGTGAATCAGA-----ACTGGCCCTAATA-GACC 3215 consensus_9065#1 CGTTTATGCTTTCTATTATGCGCGTGTGTGAATCAGA-----ACTGGCCCTAATA-GACC 705 consensus_9065#2 GAATTATCACGTGGGAGATTCGCATATGTGCAGGTGACTTTTGTTTTTGCTGATGCGACT 703 **** * ** *** * **** * ** * ** ** *** consensus_9065#0 AGTAGTTAGTAACTTAGTT-TCAATTGAGCTATGACT--GGTTTGCTGAATTATACTGTT 3272 consensus_9065#1 AGTAGTTAGTAACTTAGTT-TCAATTGAGCTATGACT--GGTTTGCTGAATTATACTGTT 762 consensus_9065#2 GATGTAAAGGAGCCAGGTTACCAGAAAAGAAATTCCTTAGACTGTTTGGATCATGC--TT 761 * ** * * *** ** ** ** ** * * ** ** ** * ** consensus_9065#0 GTATTCCATCTGACGATG-CTGTATATGTAATATCTGATGGAAAGTTTATAATCTTCTCA 3331 consensus_9065#1 GTATTCCATCTGACGATG-CTGTATATGTAATATCTGATGGAAAGTTTATAATCTTCTCT 821 consensus_9065#2 GGATCAGATCTGTCATTTTCTTTTTATAGAAAATCTGG----AGGTTCATAGT--ACCCT 815 * ** ***** * * ** * *** ** ***** * *** *** * * * consensus_9065#0 GAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGTAGCGTATCGTTGAC 3383 consensus_9065#1 GAGATCTAAAGTTCACAT---------------------------------- 839 consensus_9065#2 GAACTAT--------------------------------------------- 822 ** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||