These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9067#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2279 fasta sequence [GATCCAACGGCGCGCGCAGTTGCCTCTGGAAGACCGAAGCGAACCCGGCTCCTCACATACCGCACACCTCGCCACGAAACGCCGGAAACCCCCTCCGCCGCCGCCGCCTCCTCCTCCTCCTACCAGATGGCGGCGGCCTCGCCGGAGAGCAGGCCTCCTCGCTCGCTCTTCGACCTCCCCGCGGACTTCTTCGATTCTTCTTCCCTCCTCGGATCCCACCCTTCCTCGGCCCCCTCTGCGGCGGAACCGTCCGAGTCCATCCGGCCGGCGGCGGCCCCGCCTCTATCGCAGCCGTCGGAGGCTCCGGGGTTGAGGTGGACATGCAACACCTGCGCCTCTGAATTCGAGTCGCTGCAGGAACAGCGCGAGCACTTCAAGTCTGATCTCCATCGCCTCAACGTCAAGCTGAGCATTGCTGGTAAAACTATTATCAAGGAAGATGACTTAGACAAAGCAGATCCCGATTCTCTGTTCGATGATTTGGAGGTATCTAGTGTATCTGGATCAGAGGATGAACTTGAAAATGGGCCTGCATCAGATCGTGGTCTCTCAGCCAAAGACAAGGGAGAATTCAGGAAGAAACTTTATTTTCGCTGTCATTCTGGTGACACAGTTTCTATCTGGAGATGCATACTGTTGAAAGAACATGAAGAGCCAGTTTTCAATAGCAAGTCTGGTCAGACAGAAAGTCATGGATCTACACCATTTGTACAAGAGGATGAAATGCTAAATAGAGTGAAGAATTTGACATCTGAGCCTCGTGATGCATCACGTTTGAGGATCATTCTACTAACAAGTGGTGGACATTTTGCTGGATGTGTTTTTGATGGAAACTCAGTCATAGCCCATAAAACATTTCATAGGTATGTTGTAAGGGCAAAGGCTGGAAAGAGGCAGTCTGGGAAAGATGCTACTGGGAAGGTTGCACATTCAGCAGGCTCATCTCTTCGCCGTTATAATGAAGCGGCATTGAAAAAGGAAATTCAAGAATTAATAGCTTCTTGGAAGTCATACTTTGACCTTTGTGTCTGTGTCTTTATGTATGCTCCGTCAAAGAACCGTCAAATGCTCTTTGATGGGGATAAGACTCAGTCGGTATTGCAGGCTTGTGATATTCGTCCAATCCCATTGACTGTTCATCGGCCCACCTTGAAGGAAGCAAAACGGTTATATACTAACCTAACACAGCTCTGTTATGAGATGGAATGCTTGAGTACGGATGAACCCCATGTAGAGGATGTGACAAGTTTTGAACAAAGTAAAGAGGCAAAGCAGAAAAAAATTATGGATTCTGAGGAATCTATTTCTGTCTCGTCCTTAAGTTTGGACTTGCCAAATAAGCACGAAGGGACATCCATACATCCATCTAATAATGAAACAACGCCTCTTCACGAAGCGGCAAAGTCTGGCAATGCTCAGCAAACACTGGAGTTGCTTGAGCAGGGTTTGGATCCTTGTATTAAAGATGCAAGAGGAAAAACACCTTACTTGCTGGCTTCGGACAAAGAAGTTAGAAATACATTCAGAAGATTTATGGCACTCAACCTAGACAAATGGGATTGGCATGCGGCTGATGTGCCTAGTGCACTAACAAAGGAAATGGAAGAATCACAAGCTGCAAAGCAGGCAGAGAAGGATGCCAAGAAGAAGGCAAGAGCAAAGGAACTGAAGAAATTGAAGAAAGCAAGAGAAAAGGAAAAGGAGAAAGAAAAAGAAAAGGCACAAGCATCACAGTCCCAAAGGACCCAATCTAATGTAAGAGGCACTTCAGCTGGTCAAATGGCCAATGCAACTGCTTCTATGCCAGGCCTGAAACAAAAGCATCAGCTGCCCCAGCCTACGGCACTTTCGAAAGAGGAGGAACGACAAAGGAAACTCGCCGAGGAAAGAGAGAAAAGAGCAGCC-GCA-GCCGAAAGAAGA-TTTGCGG-CTCTGGCGGCACAATCAA-GTAG-CA-CATCAGGGACAGCAGCAGCAGAACATCCCCCA--CAGAGAGCAGCCGCGG-CAGACGATACTTCTTGTTCGTGCTGTTTTTCTTCCTTGGTCGGCAAAGTACCATTCCACAGGTACAATTA-CAAGTACTGCAGCACCACATGTATGCATCT-TCATTCAGAAATGCTGGAAGATGATTGAGGAAATCAGGAAATTGTATGACGAGAGACATGAGATTTAATTATACCTTTCACCTGTTTTTCTTATGCATGAGATTCAATAACAGGTCTATCTACCAGTCTTGCTTAATCTTTAGCTAATCCGAATCTTGTTACAAATTTCCAAAAAAAAAA] [+] EMBL AK121410 [GATCCAACGGCGCGCGCAGTTGCCTCTGGAAGACCGAAGCGAACCCGGCTCCTCACATACCGCACACCTCGCCACGAAACGCCGGAAACCCCCTCCGCCGCCGCCGCCTCCTCCTCCTCCTACCAGATGGCGGCGGCCTCGCCGGAGAGCAGGCCTCCTCGCTCGCTCTTCGACCTCCCCGCGGACTTCTTCGATTCTTCTTCCCTCCTCGGATCCCACCCTTCCTCGGCCCCCTCTGCGGCGGAACCGTCCGAGTCCATCCGGCCGGCGGCGGCCCCGCCTCTATCGCAGCCGTCGGAGGCTCCGGGGTTGAGGTGGACATGCAACACCTGCGCCTCTGAATTCGAGTCGCTGCAGGAACAGCGCGAGCACTTCAAGTCTGATCTCCATCGCCTCAACGTCAAGCTGAGCATTGCTGGTAAAACTATTATCAAGGAAGATGACTTAGACAAAGCAGATCCCGATTCTCTGTTCGATGATTTGGAGGTATCTAGTGTATCTGGATCAGAGGATGAACTTGAAAATGGGCCTGCATCAGATCGTGGTCTCTCAGCCAAAGACAAGGGAGAATTCAGGAAGAAACTTTATTTTCGCTGTCATTCTGGTGACACAGTTTCTATCTGGAGATGCATACTGTTGAAAGAACATGAAGAGCCAGTTTTCAATAGCAAGTCTGGTCAGACAGAAAGTCATGGATCTACACCATTTGTACAAGAGGATGAAATGCTAAATAGAGTGAAGAATTTGACATCTGAGCCTCGTGATGCATCACGTTTGAGGATCATTCTACTAACAAGTGGTGGACATTTTGCTGGATGTGTTTTTGATGGAAACTCAGTCATAGCCCATAAAACATTTCATAGGTATGTTGTAAGGGCAAAGGCTGGAAAGAGGCAGTCTGGGAAAGATGCTACTGGGAAGGTTGCACATTCAGCAGGCTCATCTCTTCGCCGTTATAATGAAGCGGCATTGAAAAAGGAAATTCAAGAATTAATAGCTTCTTGGAAGTCATACTTTGACCTTTGTGTCTGTGTCTTTATGTATGCTCCGTCAAAGAACCGTCAAATGCTCTTTGATGGGGATAAGACTCAGTCGGTATTGCAGGCTTGTGATATTCGTCCAATCCCATTGACTGTTCATCGGCCCACCTTGAAGGAAGCAAAACGGTTATATACTAACCTAACACAGCTCTGTTATGAGATGGAATGCTTGAGTACGGATGAACCCCATGTAGAGGATGTGACAAGTTTTGAACAAAGTAAAGAGGCAAAGCAGAAAAAAATTATGGATTCTGAGGAATCTATTTCTGTCTCGTCCTTAAGTTTGGACTTGCCAAATAAGCACGAAGGGACATCCATACATCCATCTAATAATGAAACAACGCCTCTTCACGAAGCGGCAAAGTCTGGCAATGCTCAGCAAACACTGGAGTTGCTTGAGCAGGGTTTGGATCCTTGTATTAAAGATGCAAGAGGAAAAACACCTTACTTGCTGGCTTCGGACAAAGAAGTTAGAAATACATTCAGAAGATTTATGGCACTCAACCTAGACAAATGGGATTGGCATGCGGCTGATGTGCCTAGTGCACTAACAAAGGAAATGGAAGAATCACAAGCTGCAAAGCAGGCAGAGAAGGATGCCAAGAAGAAGGCAAGAGCAAAGGAACTGAAGAAATTGAAGAAAGCAAGAGAAAAGGAAAAGGAGAAAGAAAAAGAAAAGGCACAAGCATCACAGTCCCAAAGGACCCAATCTAATGTAAGAGGCACTTCAGCTGGTCAAATGGCCAATGCAACTGCTTCTATGCCAGGCCTGAAACAAAAGCATCAGCTGCCCCAGCCTACGGCACTTTCGAAAGAGGAGGAACGACAAAGGAAACTCGCCGAGGAAAGAGAGAAAAGAGCAGCC GCA GCCGAAAGAAGA TTTGCGG CTCTGGCGGCACAATCAA GTAG CA CATCAGGGACAGCAGCAGCAGAACATCCCCCA CAGAGAGCAGCCGCGG CAGACGATACTTCTTGTTCGTGCTGTTTTTCTTCCTTGGTCGGCAAAGTACCATTCCACAGGTACAATTA CAAGTACTGCAGCACCACATGTATGCATCT TCATTCAGAAATGCTGGAAGATGATTGAGGAAATCAGGAAATTGTATGACGAGAGACATGAGATTTAATTATACCTTTCACCTGTTTTTCTTATGCATGAGATTCAATAACAGGTCTATCTACCAGTCTTGCTTAATCTTTAGCTAATCCGAATCTTGTT ] [+] EMBL AU174642 [ CGCCTCCTCCTCCTCCTACCAGATGGCGGCGGCCTCGCCGGAGAGCAGGCCTCCTCGCTCGCTCTTCGACCTCCCCGCGGACTTCTTCGATTCTTCTTCCCTCCTCGGATCCCACCCTTCCTCGGCCCCCTCTGCGGCGGAACCGTCCGAGTCCATCCGGCCGGCGGCGGCCCCGCCTCTATCGCAGCCGTCGGAGGCTCCGGGGTTGAGGTGGACATGCAACACCTGCGCCTCTGAATTCGAGTCGCTGCAGGAACAGCGCGAGCACTTCAAGTCTGATCTCCATCGCCTCAACGTCAAGCTGAGCATTGCTGGTAAAACTATTATCAAGGAAGATGACTTAGACAAAGCAGATCCCGATTCTCTGTTCGATGATTTGGAGGTATCTAGTGTATCTGGATCA ] [+] EMBL CB671080 [ TCCTCCTACCAGATGGCGGCGGCCTCGCCGGAGAGCAGGCCTCCTCGCTCGCTCTTCGACCTCCCCGCGGACTTCTTCGATTCTTCTTCCCTCCTCGGATCCCACCCTTCCTCGGCCCCCTCTGCGGCGGAACCGTCCGAGTCCATCCGGCCGGCGGCGGCCCCGCCTCTATCGCAGCCGTCGGAGGCTCCGGGGTTGAGGTGGACATGCAACACCTGCGCCTCTGAATTCGAGTCGCTGCAGGAACAGCGCGAGCACTTCAAGTCTGATCTCCATCGCCTCAACGTCAAGCTGAGCATTGCTGGTAAAACTATTATCAAGGAAGATGACTTAGACAAAGCAGATCCCGATTCTCTGTTCGATGATTTGGAGGTATCTAGTGTATCTGGATCAGAGGATGAACTTGAAAATGGGCCTGCATCAGATCGTGGTCTCTCAGCCAAAGACAAGGGAGAATTCAGGAAGAAACTTTATTTTCGCTGTCATTCTGGTGACACAGTTTCTATCTGGAGATGCATACTGTTGAAAGAACATGAAGAGCCAGTTTTCAATAGCAAGTCTGGTCAGACAGAAAGTCATGGATCTACACCATTTGTACAAGAGGATGAAATGCTAAATAGAGTGAAGAATTTGACATCTGAGCCTCGTGATGCATCACGTTTGAGGATCATTCTACTAACAAGTGGTGGACATTTTGCTGGATGTGTTTTTGATGGAAACTCAGTCATAGCCCATAAAACATTTCATAGGTATGTTGTAAGGGC AAGGCTGGAAAGAGGCAGTCTGGG AAGATGCTACTGGGAAGGgt ] [+] EMBL CF312451 [ atTTGCTTGAGCAGGGTTTGGATCCTTGTATTAAAGATGCAAGAGGAAAAACACCTTACTTGCTGGCTTCGGACAAAGAAGTTAGAAATACATTCAGAAGATTTATGGCACTCAACCTAGACAAATGGGATTGGCATGCGGCTGATGTGCCTAGTGCACTAACAAAGGAAATGGAAGAATCACAAGCTGCAAAGCAGGCAGAGAAGGATGCCAAGAAGAAGGCAAGAGCAAAGGAACTGAAGAAATTGAAGAAAGCAAGAGAAAAGGAAAAGGAAAAA ] [-] EMBL CB671081 [ GCAGGGTTTGGATCCTTGTATTAAAGATGCAAGAGGAAAAACACCTTACTTGCTGGCTTCGGACAAAGAAGTTAGAAATACATTCAGAAGATTTATGGCACTCAACCTAGACAAATGGGATTGGCATGCGGCTGATGTGCCTAGTGCACTAACAAAGGAAATGGAAGAATCACAAGCTGCAAAGCAGGCAGAGAAGGATGCCAAGAAGAAGGCAAGAGCAAAGGAACTGAAGAAATTGAAGAAAGCAAGAGAAAAGGAAAAGGAGAAAGAAAAAGAAAAGGCACAAGCATCACAGTCCCAAAGGACCCAATCTAATGTAAGAGGCACTTCAGCTGGTCAAATGGCCAATGCAACTGCTTCTATGCCAGGCCTGAAACAAAAGCATCAGCTGCCCCAGCCTACGGCACTTTCGAAAGAGGAGGAACGACAAAGGAAACTCGCCGAGGAAAGAGAGAAAAGAGCAGCC GCA GCCGAAAGAAGA TTTGCGG CTCTGGCGGCACAATCAA GTAG CA CATCAGGGACAGCAGCAGCAGAACATCCCCCA CAGAGAGCAGCCGCGG CAGACGATACTTCTTGTTCGTGCTGTTTTTCTTCCTTGGTCGGCAAAGTACCATTCCACAGGTACAATTA CAAGTACTGCAGCACCACATGTATGCATCT TCATTCAGAAATGCTGGAAGATGATTGAGGAAATCAGGAAATTGTATGACGAGAGACATGAGATTTAATTATGCCTTTCACCTGTTTTTCTTATGCATGAGATTC ] [+] EMBL BI805214 [ GAGAG AAAGAGCATCCTGCATGCCGAAAGAAGAGTTTGCGGTGTCTGGCGGCACAATCAAGGTAGTCATCATCAGGGACAGCAGCAGCAGAACATCCCCCATGCAGAGAGCAGCCGCGGTCAGACGATACTTCTTGTTCGTGCTGTTTTTCTTCCTT GTCGGC AAGTACCATTCCACAGGTACAGTTAGCAAGTACTGCAGCACCACATGTAGGCATCTGTCATTCAGAAATGCTGGAAGATGATTGAGGAAATCAGGAAATTGTATGACGAGAGACATGAGATTTAATTATACCTTTCACCTGTTTTTCTTATGCATGAGATTCAATAACAGGTCTATCTACCAGTCTTGCTTAATCTTTAGCTAATCCGAATCTTGTTACAAATTTCCAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||