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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9076#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1343 fasta sequence
[CTGCAGCGCTGTAGGCTAGCTAGCTGCCAACCCACCGACGCTTCCATGGCTTCCACCTCCTCCCCTCCTCGCCACCTCTTCTTCCTTTTCGCGCTCGCGTTCCTCGCAGCTGGCGCCGCCGACGCGTGGCCGGCGTGGGGCAATGGCCGCATGTTCTTCAGCAAGGCGACGCGCCCCGAAGCCGTCGAGCTTGACAAGGTGGCGGTAGCGACACCGGCAGCGGCAGCGGCGCCGGATGCCACCAACTCCAACCGCGCGTCGGATGAGTTTTCTCGGCCGTCCAGCGGCGGAAGCCACAACCGCGGGTACGGCCTCTACGGCCGCCCGGAGGAGAGCTACCCGGAGGCCTACTTCCGCCGCGGCGTGCACCACGACGCCGATAAGCTGACGACCACCAGCGCGGCGGCGGCCACGGCCGAGCAAGAAAAAGAGGAGGAAGCGACACCGGCAGGCGACGACGACGCCTGGCTTGGGTACCCCGCAGACGGCAGCGGCAGGGGGCGGCCGCGGCCGTACCCGCGCGGACAGCAGCAGCAAACGACCACCACCAATGCGGCGGTGGCCACGGCCGAGCAGGAGGACGCGGCGCCGGCACGCGACGGCACCGGGCTTGGGTA-CAGCGAAGACAGCAGCGGCAGGGGGCGGCCGATGTCGTACGGGCGCATGCGCGGCGGACAGCAGCA--GCAGCAACAGCCGCAGCAGCAATACGGGATGAGCGACACGAGGCTGTACCAGAACGGCCGGTACGGCTACGACGTGAACACCGGCAAGTACGGCTACGGCCGCGAGTCCAACCCGGTGCGGACGCGGCCCGAGGAGTTCAACGGCGGGAGGAAGTTTGGCGGCAATGCGGCCGGCGGGCAAGAGTACGCGAACGGCAACTATCAGGAGGAGTTCGGCGTCGGCCACCGTGCCGGCGAGCAGGTGAGGAGGTATGGCAATGGCAATGTGGCCGGGCTAGAGTACGCAAACGGCAACGATCACGAGGAGTTTGGCATCGGGCAGCGCGCCGGCGTGCAGACGGGGAGGAGGTATGACAATGCGGCGGCAGGGTACTACGACGCGAACGGGCAGTACATTCCATGAGTAAGATCTCAATGATGTTATACTGCGAAGCGTTTGTAGTACAGTGGTAGTATACTCGCGTTCACCTCCTTGTGTGCTGGAAGTAAGTTATGTTACGTTACTTCGAAGGTAGATCGAGCTGGTCGCTCGCCCG--CTCGTACGTGCGCTTGTTATGGG----GTGATTGAAGGGATGAATCACTTTTGTCGGATAACTAGTGGAATGTACTCGTCTCACTGTACAAGAAATAATGCATGCTACAGTACTATATGTCACTACAA]
[+] EMBL AK121555 [CTGCAGCGCTGTAGGCTAGCTAGCTGCCAACCCACCGACGCTTCCATGGCTTCCACCTCCTCCCCTCCTCGCCACCTCTTCTTCCTTTTCGCGCTCGCGTTCCTCGCAGCTGGCGCCGCCGACGCGTGGCCGGCGTGGGGCAATGGCCGCATGTTCTTCAGCAAGGCGACGCGCCCCGAAGCCGTCGAGCTTGACAAGGTGGCGGTAGCGACACCGGCAGCGGCAGCGGCGCCGGATGCCACCAACTCCAACCGCGCGTCGGATGAGTTTTCTCGGCCGTCCAGCGGCGGAAGCCACAACCGCGGGTACGGCCTCTACGGCCGCCCGGAGGAGAGCTACCCGGAGGCCTACTTCCGCCGCGGCGTGCACCACGACGCCGATAAGCTGACGACCACCAGCGCGGCGGCGGCCACGGCCGAGCAAGAAAAAGAGGAGGAAGCGACACCGGCAGGCGACGACGACGCCTGGCTTGGGTACCCCGCAGACGGCAGCGGCAGGGGGCGGCCGCGGCCGTACCCGCGCGGACAGCAGCAGCAAACGACCACCACCAATGCGGCGGTGGCCACGGCCGAGCAGGAGGACGCGGCGCCGGCACGCGACGGCACCGGGCTTGGGTA CAGCGAAGACCGCAGCGGCAGGGGGCGGCCGATGTCGTACGCGCGCATGCGCGGCGGACAGCAGCA GCAGCAACAGCCGCAGCAGCAATACGGGATGAGCGACACGAGGCTGTACCAGAACGGCCGGTACGGCTACGACGTGAACACCGGCAAGTACGGCTACGGCCGCGAGTCCAACCCGGTGCGGACGCGGCCCGAGGAGTTCAACGGCGGGAGGAAGTTTGGCGGCAATGCGGCCGGCGGGCAAGAGTACGCGAACGGCAACTATCAGGAGGAGTTCGGCGTCGGCCACCGTGCCGGCGAGCAGGTGAGGAGGTATGGCAATGGCAATGTGGCCGGGCAAGAGTACGAAAACGGCAACGATCACGAGGAGTTTGGCATCGGGCAGCGCGCCGGCGTGCAGACGGGGAGGAGGTATGACAATGCGGCGGCAGGGTACTACGACGCGAACGGGCAGTACATTCCATGAGT ATCTCAATGATGTTATACTGCGAAGCGTTTGTAGTACAGTGGTAGTATACTCGCGTTCACCTCCTTGTGTGCTGGAAGTAAGTTATGTTAGGTTACTTCGAAGGTAGATCGAGCTGGTCGCTCGCCCGCTCTCGTACGTGCGCTTGTTATGGG GTGATTGAAGGGATGAATCACTTTTGTCGGATAACTAGTGGAATGTACTCGTCTCACTGTACAAGAAATAATGCATGCTACAGTACTATATGTCACTACAA]
[+] EMBL AU166022 [ AGCGCTGTAGGCTAGCTAGCTGCCAACCCACCGACGCTTCCATGGCTTCCACCTCCTCCCCTCCTCGCCACCTCTTCTTCCTTTTCGCGCTCGCGTTCCTCGCAGCTGGCGCCGCCGACGCGTGGCCGGCGTGGGGCAATGGCCGCATGTTCTTCAGCAAGGCGACGCGCCCCGAAGCCGTCGAGCTTGACAAGGTGGCGGTAGCGACACCGGCAGCGGCAGCGGCGCCGGATGCCACCAACTCCAACCGCGCGTCGGATGAGTTTTCTCGGCCGTCCAGCGGCGGAAGCCACAACCGCGGGTACGGCCTCTACGGCCG CCGGAGGAGAGCTACCCGGAGGCCTACTTCCGCCGCGGCGTGCACCACGACGCCGATAAGCTGACGACCACCAGCGCGGCGGCGGCCACGGCCGAGCAAGAAAAAGAGGAGGAAGCGACACCGGCAGGCGACGACGACGCCTGGCTTGGGTACCCCGCAGACGGCAGCGGCAG ]
[+] EMBL AU164285 [ GCTGTAGGCTAGCTAGCTGCCAACCCACCGACGCTTCCATGGCTTCCACCTCCTCCCCTCCTCGCCACCTCTTCTTCCTTTTCGCGCTCGCGTTCCTCGCAGCTGGCGCCGCCGACGCGTGGCCGGCGTGGGGCAATGGCCGCATGTTCTTCAGCAAGGCGACGCGCCCCGAAGCCGTCGAGCTTGACAAGGTGGCGGTAGCGACACCGGCAGCGGCAGCGGCGCCGGATGCCACCAACTCCAACCGCGCGTCGGATGAGTTTTCTCGGCCGTCCAGCGGCGGAAGCCACAACCGCGGGTACGGCCTCTACGGC ]
[+] EMBL AU164286 [ GCGTGGCCGGCGTGGGGCAATGGCCGCATGTTCTTCAGCAAGGCGACGCGCCCCGAAGCCGTCGAGCTTGACAAGGTGGCGGTAGCGACACCGGCAGCGGCAGCGGCGCCGGATGCCACCAACTCCAACCGCGCGTCGGATGAGTTTTCTCGGCCGTCCAGCGGCGGAAGCCACAACCGCGGGTACGGCCTCTACGGCCGCCCGGAGGAGAGCTACCCGGAGGCCTACTTCCGCCGCGGCGTGCACCACGACGCCGATAAGCTGACGACCACCAGCGCGGCGGCGGCCACGGCCGAGCAAGAAAAAGAGGAGGAAGCGACACCGGCAGGCGACGACGACGCCTGGCTTGGGTACCCCGCAGACGGCA ]
[+] EMBL CB966425 [ ggaatagctGCGG CGCGGCCGTACCCGCGCGGACAGCAGCAGCAAACGACCACCACCAATGCGGCGGTGGCCACGGCCGAGCAGGAGGACGCGGCGCCGGCACGCGACGGCACCGGGCTTGGGTACCAGCGAAGACAGCAGCGGCAGGGGGCGGCCGATGTCGTACGGGCGCATGCGCGGCGGACAGCAGGAAGGAAGCAACAGCCGCAGCAGCAATACGGGATGAGCGACACGAGGCTGTACCAGAACGGCCGGTACGGCTACGACGTGAACACCGGCAAGTACGGCTACGGCCGCGAGTCCAACCCGGTGCGGACGCGGCCCGAGGAGTTCAACGGCGGGAGGAAGTTTGGCGGCAATGCGGCCGGCGGGCAAGAGTACGCGAACGGCAACTATCAGGAGGAGTTCGGCGTCGGCCACCGTGCCGGCGAGCAGGTGAGGAGGTATGGCAATGGCAATGTGGCCGGGCTAGAGTACGCAAACGGCAACGATCACGAGGAGTTTGGCATCGGGCAGCGCGCCGGCGTGCAGACGGGGAGGAGGTATGACAATGCGGCGGCAGGGTACTACGACGCGAACGGGCAGTACATTCCATGAGTAAGATCTCAATGATGTTATACTGCGAAGCGTTTGTAGTACAGTGGTAGTATACTCGCGTTCACCTCCTTGTGTGCTGGAAGTAAGTTATGTTACGTTACTTCGAAGGGTGATCGAGCTGGTCGCTCGCCCG CTCGTACGTGCGCTTG TATGGGGGGTGTGCTTGACGGGATG ATCACTTTTGTCGGATAACTAGTGGAATGTACTCGTCTCAtggtca ]
[+] EMBL BI306231 [ CGCGCGGACAGCAGCAGCAAACGACCACCACCAATGCGGCGGTGGCCACGGCCGAGCAGGAGGACGCGGCGCCGGCACGCGACGGCACCGGGCTTGGGTA CAGCGAAGACAGCAGCGGCAGGGGGCGGCCGATGTCGTACGGGCGCATGCGCGGCGGACAGCAGCA GCAGCAACAGCCGCAGCAGCAATACGGGATGAGCGACACGAGGCTGTACCAGAACGGCCGGTACGGCTACGACGTGAACACCGGCAAGTACGGCTACGGCCGCGAGTCCAACCCGGTGCGGACGCGGCCCGAGGAGTTCAACGGCGGGAGGAAGTTTGGCGGCAATGCGGCCGGCGGGCAAGAGTACGCGAACGGCAACTATCAGGAGGAGTTCGGCGTCGGCCACCGTGCCGGCGAGCAGGTGAGGAGGTATGGCAATGGCAATGTGGCCGGGCTAGAGTACGCAAACGGCAACGATCACGAGGAGTTTGGCATCGGGCAGCGCGCCGGCGTGCAGACGGGGAGGAGGTATGACAATGCGGCGGCAGGGTACTACGACGCGAACGGGCAGTACATTCCATGAGTAAGATCTCAATGATGTTATACTGCGAAGCGTTTGTAGTACAGTGGTAGTATACTCGCGTTCACCTCCTTGTGTGCTGGAAGTAAGTTATGTTACCTTACTTCGAAGGTAGATCGAGCTGGTCGCTCGCCCG CTCGTACGTGCGCTTGTTATGGG GTGtga ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||