cluster # 9090

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Oryza sativa
cluster # 9090 cluster # 9090 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9090#0 length = 1947 sequences # 6
consensusID : consensus_9090#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1947
fasta sequence
                              [TTCCCACGCCACCGTCGAACACCTTCACCCATGGCGTCCATGGCCGCCCTCCTCGTCGTCGTCTTCCTCGCCGGCTGCCACGTGGGGGTAGTGGTGGCGCAGGGGAGGAGCACCGCGGCGGCGCATGGCATCGGGGTGAACTACGGGAGGGTGGCGGACGACATCCCGCCGCCGGCGAGGTCGGTGGAGCTCCTCCGGGCGGTGGGGGCCGGGTCGGTGAAGATCTACGACGCGAACTCGAGCGTGCTCCGCGCGCTGGCGGGGACGCGCATGCGGGTGTCGATCATGGTGCCCAACGAGATCATCCCGGGGCTCGCCGCCTCCGCCGCCGCCGCGGACAGGTGGGTGGCGGAGAATCTGGTGCCCTACTACCCGGAGACGCGGGTCAAGTACCTCCTCGTCGGCAACGAGCTCCTCTCCGACTACTCCATCGCCAACTCCACCTGGCCCCGCATCGTGCCGGCCATGGAGAACCTCCTCGTGAGCCTCCGGAGGAGGAGGATCAGCAGCGTCAAGATCAGCACCACGCTCGCCATGGACGCGCTCACGTCGGGGTCGTTCCCGCGGCCGCCGTCCGCCGCGGCGTTCCGCCCCGACATCGCCGGCGACGTCGTGCGCCCGCTGCTCCGGTTCTTGAACGGGACGAACTCGTACTACTTCGTCGACGCCTACCCGTACTTCGTCTGGGCCGGCAACAACGACACCGTCCCGCTCGAGTACGCGCTCTTCCAGGGCGGCGGCGGCGGCGGCCGCTACGTTGATCCGGGCACGGGGCTCACATACACCAACATGCTCGACGAAATGCTCGACGCCGTGGTGCACGCGATGGCGAAGCTGGGGTACGGGGGCGTGAAGCTGGGCATCGCGGAGACCGGCTGGCCCAACGGCGGCGACTACGAGCAGATCGGCTGCAACGCCCACAACGCCGCCATCTACAACAGGAACCTCGCGGCGCGGATGGCGAGGAGCCCCGGCACGCCGGCGCGGCCCGGCGCGAAGATGCCGGTGTTCGTGTTCTCGCTCTACAACGAGGACCTCAAGCCGGGGCCCGGCACGGAGCGGCACTGGGGGCTGTACTACGCCAACGGCACGGCGGTGTACCCGGTTGACCTCGCCGGAGCGCGGCCGCTCCGGTCGTACCCGCTGCTGCCGCCGCCGGAGAACGACGCGCCGTACAAGGGCCCCGTGTGGTGCGTGCTCGCCGGCCGCCGCGGCGAGAAGCTGAACGAGACGGCGGTGGGCGACGCGCTGGCGTACGCGTGCGGGCAGGGGAACGGGACGTGCGACGCCATCCAGCCCGGCGGGGAGTGCTTCCGGCCGAACACCACGGCGGCGCACGCCAGCTACGCCTTCAACTCGTACTGGCAGCAGCTGAGGAAGACCGGTGCGACGTGCTACTTCAACAACCTCGCCGAGGAGACCACCAAAGATCCAAGCCACGGATCATGCAAATTCCACAGTTCTTTGGACTAACTGATTGCATGGGAGGACAATATGAAAATGAACAACATTGTTCTCGATTTATTTTATTTTTGTCAAACCTGATTAGATTTAGACCCAGGAAGTTAGGTAGTTGAGTACTTCTGTATCTGCTCATCGTCTACAAAACCTGTGAACTGTGATGTAACAGCGAAATTTGCCGTCTGTTTTTCTGTGGCTTAATCAGTAGAAGAAGATCTGTGGCTTAATTAGAACGAAATTTTCAGAACTGAACCACCTGCCTCTGCATGGGCCTCACATGGGCCATACATGGGCCTGCACCTGCCTCTGCAACCGAGCTAGGAGTAGCAGTTCTGCCA-CACGGCCCGTCTA-CAAGGATGGTGTTGTACTGTGTCACTCATCCTTCGAGTTTTAGTTTTTTTTTTTTGTAATATCTTTTAATAGTTTGCA-CATCATCTA-CAGAAATATTTTGATGTATG-CA-AGTTATTTAAAAAGAATCTTTTATAT]

[+] EMBL AK121879             [TTCCCACGCCACCGTCGAACACCTTCACCCATGGCGTCCATGGCCGCCCTCCTCGTCGTCGTCTTCCTCGCCGGCTGCCACGTGGGGGTAGTGGTGGCGCAGGGGAGGAGCACCGCGGCGGCGCATGGCATCGGGGTGAACTACGGGAGGGTGGCGGACGACATCCCGCCGCCGGCGAGGTCGGTGGAGCTCCTCCGGGCGGTGGGGGCCGGGTCGGTGAAGATCTACGACGCGAACTCGAGCGTGCTCCGCGCGCTGGCGGGGACGCGCATGCGGGTGTCGATCATGGTGCCCAACGAGATCATCCCGGGGCTCGCCGCCTCCGCCGCCGCCGCGGACAGGTGGGTGGCGGAGAATCTGGTGCCCTACTACCCGGAGACGCGGGTCAAGTACCTCCTCGTCGGCAACGAGCTCCTCTCCGACTACTCCATCGCCAACTCCACCTGGCCCCGCATCGTGCCGGCCATGGAGAACCTCCTCGTGAGCCTCCGGAGGAGGAGGATCAGCAGCGTCAAGATCAGCACCACGCTCGCCATGGACGCGCTCACGTCGGGGTCGTTCCCGCGGCCGCCGTCCGCCGCGGCGTTCCGCCCCGACATCGCCGGCGACGTCGTGCGCCCGCTGCTCCGGTTCTTGAACGGGACGAACTCGTACTACTTCGTCGACGCCTACCCGTACTTCGTCTGGGCCGGCAACAACGACACCGTCCCGCTCGAGTACGCGCTCTTCCAGGGCGGCGGCGGCGGCGGCCGCTACGTTGATCCGGGCACGGGGCTCACATACACCAACATGCTCGACGAAATGCTCGACGCCGTGGTGCACGCGATGGCGAAGCTGGGGTACGGGGGCGTGAAGCTGGGCATCGCGGAGACCGGCTGGCCCAACGGCGGCGACTACGAGCAGATCGGCTGCAACGCCCACAACGCCGCCATCTACAACAGGAACCTCGCGGCGCGGATGGCGAGGAGCCCCGGCACGCCGGCGCGGCCCGGCGCGAAGATGCCGGTGTTCGTGTTCTCGCTCTACAACGAGGACCTCAAGCCGGGGCCCGGCACGGAGCGGCACTGGGGGCTGTACTACGCCAACGGCACGGCGGTGTACCCGGTTGACCTCGCCGGAGCGCGGCCGCTCCGGTCGTACCCGCTGCTGCCGCCGCCGGAGAACGACGCGCCGTACAAGGGCCCCGTGTGGTGCGTGCTCGCCGGCCGCCGCGGCGAGAAGCTGAACGAGACGGCGGTGGGCGACGCGCTGGCGTACGCGTGCGGGCAGGGGAACGGGACGTGCGACGCCATCCAGCCCGGCGGGGAGTGCTTCCGGCCGAACACCACGGCGGCGCACGCCAGCTACGCCTTCAACTCGTACTGGCAGCAGCTGAGGAAGACCGGTGCGACGTGCTACTTCAACAACCTCGCCGAGGAGACCACCAAAGATCCAAGCCACGGATCATGCAAATTCCACAGTTCTTTGGACTAACTGATTGCATGGGAGGACAATATGAAAATGAACAACATTGTTCTCGATTTATTTTATTTTTGTCAAACCTGATTAGATTCAGACCCAGGAAGTTAGGTAGTTGAGTACTTCTGTATCTGCTCATCGTCTACAAAACCTGTGAACTGTGATGTAACAGCGAAATTTGCCGTCTGTTTTTCTGTGGCTTAATCAGTAGAAGAAGATCTGTGGCTT                                                                                                                                                                                                                                                                           ]
[+] EMBL AK102600             [    CACGCCACCGTCGAACACCTTCACCCATGGCGTCCATGGCCGCCCTCCTCGTCGTCGTCTTCCTCGCCGGCTGCCACGTGGGGGTAGTGGTGGCGCAGGGGAGGAGCACCGCGGCGGCGCATGGCATCGGGGTGAACTACGGGAGGGTGGCGGACGACATCCCGCCGCCGGCGAGGTCGGTGGAGCTCCTCCGGGCGGTGGGGGCCGGGTCGGTGAAGATCTACGACGCGAACTCGAGCGTGCTCCGCGCGCTGGCGGGGACGCGCATGCGGGTGTCGATCATGGTGCCCAACGAGATCATCCCGGGGCTCGCCGCCTCCGCCGCCGCCGCGGACAGGTGGGTGGCGGAGAATCTGGTGCCCTACTACCCGGAGACGCGGGTCAAGTACCTCCTCGTCGGCAACGAGCTCCTCTCCGACTACTCCATCGCCAACTCCACCTGGCCCCGCATCGTGCCGGCCATGGAGAACCTCCACGTGAGCCTCCGGAGGAGGAGGATCAGCAGCGTCAAGATCAGCACCACGCTCGCCATGGACGCGCTCACGTCGGGGTCGTTCCCGCGGCCGCCGTCCGCCGCGGCGTTCCGCCCCGACATCGCCGGCGACGTCGTGCGCCCGCTGCTCCGGTTCTTGAACGGGACGAACTCGTACTACTTCGTCGACGCCTACCCGTACTTCGTCTGGGCCGGCAACAACGACACCGTCCCGCTCGAGTACGCGCTCTTCCAGGGCGGCGGCGGCGGCGGCCGCTACGTTGATCCGGGCACGGGGCTCACATACACCAACATGCTCGACGAAATGCTCGACGCCGTGGTGCACGCGATGGCGAAGCTGGGGTACGGGGGCGTGAAGCTGGGCATCGCGGAGACCGGCTGGCCCAACGGCGGCGACTACGAGCAGATCGGCTGCAACGCCCACAACGCCGCCATCTACAACAGGAACCTCGCGGCGCGGATGGCGAGGAGCCCCGGCACGCCGGCGCGGCCCGGCGCGAAGATGCCGGTGTTCGTGTTCTCGCTCTACAACGAGGACCTCAAGCCGGGGCCCGGCACGGAGCGGCACTGGGGGCTGTACTACGCCAACGGCACGGCGGTGTACCCGGTTGACCTCGCCGGAGCGCGGCCGCTCCGGTCGTACCCGCTGCTGCCGCCGCCGGAGAACGACGCGCCGTACAAGGGCCCCGTGTGGTGCGTGCTCGCCGGCCGCCGCGGCGAGAAGCTGAACGAGACGGCGGTAAGCGACGCGCTGGCGTACGCGTGCGGGCAGGGGAACGGGACGTGCGACGCCATCCAGCCCGGCGGGGAGTGCTTCCGGCCGAACACCACGGCGGCGCACGCCAGCTACGCCTTCAACTCGTACTGGCAGCAGCTGAGGAAGACCGGTGCGACGTGCTACTTCAACAACCTCGCCGAGGAGACCACCAAAGATCCAAGCCACGGATCATGCAAATTCCACAGTTCTTTGGACTAACTGATTGCATGGGAGGACAATATGAAAATGAACAACATTGTTCTCGATTTATTTTATTTTTGTCAAACCTGATTAGATTTAGACCCAGGAAGTTAGGTAGTTGAGTACTTCTGTATCTGCTCATCGTCTACAAAACCTGTGAACTGTGATGTAACAGCGAAATTTGCCGTCTGTTTTTCTGTGGCTTAATCAGTAGAAGAAGATCTGTGGCTTAATTAGAACGAAATTTTCAGAACTGAACCACCTGCCTCTGCATGGGCCTCACATGGGCCATACATGGGCCTGCACCTGCCTCTGCAACCGAGCTAGGAGTAGCAGTTCTGCCA CACGGCCCGTCTA CAAGGATGGTGTTGTACTGTGTCACTCATCCTTCGAGTTTTAG  TTTTTTTTTTGTAATATCTTTTAATAGTTTGCA CATCATCTA CAGAAATATTTTGATGTACG CA AGTTATTTAAAAAGAATCTT      ]
[-] EMBL CB966400             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTCAAACCTGATTAGATTTAGACCCAGGAAGTTAGGTAGTTGAGTACTTCTGTATCTGCTCATCGTCTACCAAACCTGTGAACTGTGATGTAACAGAGAAATTTGCCGTCTGTTTTTCTGTGGCTTAATCAGTAGAAGAAGATCTGTGGCTTAATTAGAACGAAATTTTCAGAACTGAACCACCTGCCTCTGCATGGGCCTCACATGGGCCATACATGGGCCTGCACCTGCCTCTGCAACCGAGCTAGGAGTAGCAGTTCTGCCA CACGGCCCGTCTA CAAGGATGGTGTTGTACTGTGTCACTCATCCTTCGAGTTTTAGTTTTTTTTTTTTGTAATATCTTTTAATAGTTTGCA CATCATCTA CAGAAATATTTTGATGTATGCCACAGTTATTTAAAAAGAATCTTTTATAT]
[-] EMBL CB966347             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GTCAAACCTGATTAGATTTAGACCCAGGAAGTTAGGTAGTTGAGTACTTCTGTATCTGCTCATCGTCTACCAAACCTGTGAACTGTGATGTAACAGAGAAATTTCCCGTCTGTTTTTCTGTGGCTTAATCAGTAGAAGAAGATCTGTGGCTTAATTAGAACGAAATTTTCAGAACTGAACCCCCTGCCTCTGCATGGGCCTCACATGGGCCATACATGGGCCTGCACCTGCCTCTGCAACCGAGCTAGGAGTAGCAGTTCTGCCA CACGGCCCGTCTA CAAGGATGGTGTTGTACTGTGTCACTCATCCTTCGAGTTTTAGTTTTTTTTTTTTGTAATATCTTTTAATAGTTTGCA CATCATCTA CAGAAATATTTTGATGTATG CA AGTTATTTAAAAAGAATCTTTAATAT]
[-] EMBL CB966775             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTCTGCCACCCCGGCCCGTCTACCCAGGATGGTGTTGTACTGTGTCACTCATCCTTCGAGTTTTAGTTTTTTTTTTTTGTAATATCTTTTAATAGTTTGCA CATCATCTACCAGAAATATTTTGATGTATG CC AGTTATTTAAAAAG ATCTTTTATAT]
[-] EMBL CB965569             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTTAATAGTTCGCACCATCATCTACCAGAAATATTTTGATGTATG CC AGTTATTTAAAAAGAATCTTTTATA ]




>consensus_9090#0
TTCCCACGCCACCGTCGAACACCTTCACCCATGGCGTCCATGGCCGCCCTCCTCGTCGTC
GTCTTCCTCGCCGGCTGCCACGTGGGGGTAGTGGTGGCGCAGGGGAGGAGCACCGCGGCG
GCGCATGGCATCGGGGTGAACTACGGGAGGGTGGCGGACGACATCCCGCCGCCGGCGAGG
TCGGTGGAGCTCCTCCGGGCGGTGGGGGCCGGGTCGGTGAAGATCTACGACGCGAACTCG
AGCGTGCTCCGCGCGCTGGCGGGGACGCGCATGCGGGTGTCGATCATGGTGCCCAACGAG
ATCATCCCGGGGCTCGCCGCCTCCGCCGCCGCCGCGGACAGGTGGGTGGCGGAGAATCTG
GTGCCCTACTACCCGGAGACGCGGGTCAAGTACCTCCTCGTCGGCAACGAGCTCCTCTCC
GACTACTCCATCGCCAACTCCACCTGGCCCCGCATCGTGCCGGCCATGGAGAACCTCCTC
GTGAGCCTCCGGAGGAGGAGGATCAGCAGCGTCAAGATCAGCACCACGCTCGCCATGGAC
GCGCTCACGTCGGGGTCGTTCCCGCGGCCGCCGTCCGCCGCGGCGTTCCGCCCCGACATC
GCCGGCGACGTCGTGCGCCCGCTGCTCCGGTTCTTGAACGGGACGAACTCGTACTACTTC
GTCGACGCCTACCCGTACTTCGTCTGGGCCGGCAACAACGACACCGTCCCGCTCGAGTAC
GCGCTCTTCCAGGGCGGCGGCGGCGGCGGCCGCTACGTTGATCCGGGCACGGGGCTCACA
TACACCAACATGCTCGACGAAATGCTCGACGCCGTGGTGCACGCGATGGCGAAGCTGGGG
TACGGGGGCGTGAAGCTGGGCATCGCGGAGACCGGCTGGCCCAACGGCGGCGACTACGAG
CAGATCGGCTGCAACGCCCACAACGCCGCCATCTACAACAGGAACCTCGCGGCGCGGATG
GCGAGGAGCCCCGGCACGCCGGCGCGGCCCGGCGCGAAGATGCCGGTGTTCGTGTTCTCG
CTCTACAACGAGGACCTCAAGCCGGGGCCCGGCACGGAGCGGCACTGGGGGCTGTACTAC
GCCAACGGCACGGCGGTGTACCCGGTTGACCTCGCCGGAGCGCGGCCGCTCCGGTCGTAC
CCGCTGCTGCCGCCGCCGGAGAACGACGCGCCGTACAAGGGCCCCGTGTGGTGCGTGCTC
GCCGGCCGCCGCGGCGAGAAGCTGAACGAGACGGCGGTGGGCGACGCGCTGGCGTACGCG
TGCGGGCAGGGGAACGGGACGTGCGACGCCATCCAGCCCGGCGGGGAGTGCTTCCGGCCG
AACACCACGGCGGCGCACGCCAGCTACGCCTTCAACTCGTACTGGCAGCAGCTGAGGAAG
ACCGGTGCGACGTGCTACTTCAACAACCTCGCCGAGGAGACCACCAAAGATCCAAGCCAC
GGATCATGCAAATTCCACAGTTCTTTGGACTAACTGATTGCATGGGAGGACAATATGAAA
ATGAACAACATTGTTCTCGATTTATTTTATTTTTGTCAAACCTGATTAGATTTAGACCCA
GGAAGTTAGGTAGTTGAGTACTTCTGTATCTGCTCATCGTCTACAAAACCTGTGAACTGT
GATGTAACAGCGAAATTTGCCGTCTGTTTTTCTGTGGCTTAATCAGTAGAAGAAGATCTG
TGGCTTAATTAGAACGAAATTTTCAGAACTGAACCACCTGCCTCTGCATGGGCCTCACAT
GGGCCATACATGGGCCTGCACCTGCCTCTGCAACCGAGCTAGGAGTAGCAGTTCTGCCAC
ACGGCCCGTCTACAAGGATGGTGTTGTACTGTGTCACTCATCCTTCGAGTTTTAGTTTTT
TTTTTTTGTAATATCTTTTAATAGTTTGCACATCATCTACAGAAATATTTTGATGTATGC
AAGTTATTTAAAAAGAATCTTTTATAT
clustalw multiple alignements is not computed in this case